-- dump date 20120504_163530 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_392517.1 78776202 3763419 15..1322 1 NC_007575.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1322 dnaA 3763419 dnaA Sulfurimonas denitrificans DSM 1251 chromosome replication initiator DnaA YP_392517.1 15 D 326298 CDS YP_392518.1 78776203 3763420 1490..2557 1 NC_007575.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2557 3763420 Suden_0002 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit beta YP_392518.1 1490 D 326298 CDS YP_392519.1 78776204 3763421 2707..5016 1 NC_007575.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5016 gyrB 3763421 gyrB Sulfurimonas denitrificans DSM 1251 DNA gyrase subunit B YP_392519.1 2707 D 326298 CDS YP_392520.1 78776205 3763422 5041..5418 1 NC_007575.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 5418 3763422 Suden_0004 Sulfurimonas denitrificans DSM 1251 7-cyano-7-deazaguanine reductase YP_392520.1 5041 D 326298 CDS YP_392521.1 78776206 3763824 complement(5407..6642) 1 NC_007575.1 polynucleotide adenylyltransferase 6642 3763824 Suden_0005 Sulfurimonas denitrificans DSM 1251 polynucleotide adenylyltransferase YP_392521.1 5407 R 326298 CDS YP_392522.1 78776207 3763825 6798..8600 1 NC_007575.1 GTP-binding protein TypA 8600 3763825 Suden_0006 Sulfurimonas denitrificans DSM 1251 GTP-binding protein TypA YP_392522.1 6798 D 326298 CDS YP_392523.1 78776208 3763826 8748..10673 1 NC_007575.1 TonB-dependent receptor 10673 3763826 Suden_0007 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_392523.1 8748 D 326298 CDS YP_392524.1 78776209 3763827 complement(10712..12604) 1 NC_007575.1 histidine kinase 12604 3763827 Suden_0008 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392524.1 10712 R 326298 CDS YP_392525.1 78776210 3763828 complement(12601..13275) 1 NC_007575.1 two component transcriptional regulator 13275 3763828 Suden_0009 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_392525.1 12601 R 326298 CDS YP_392526.1 78776211 3763829 13468..16977 1 NC_007575.1 filamentous hemagglutinin 16977 3763829 Suden_0010 Sulfurimonas denitrificans DSM 1251 filamentous hemagglutinin YP_392526.1 13468 D 326298 CDS YP_392527.1 78776212 3763830 16989..18692 1 NC_007575.1 hemolysin activation/secretion protein-like protein 18692 3763830 Suden_0011 Sulfurimonas denitrificans DSM 1251 hemolysin activation/secretion protein-like protein YP_392527.1 16989 D 326298 CDS YP_392528.1 78776213 3763831 complement(18752..19672) 1 NC_007575.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 19672 3763831 Suden_0012 Sulfurimonas denitrificans DSM 1251 bifunctional methionine sulfoxide reductase B/A protein YP_392528.1 18752 R 326298 CDS YP_392529.1 78776214 3763832 19839..20861 1 NC_007575.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 20861 nrdF 3763832 nrdF Sulfurimonas denitrificans DSM 1251 ribonucleotide-diphosphate reductase subunit beta YP_392529.1 19839 D 326298 CDS YP_392530.1 78776215 3763833 20848..21591 1 NC_007575.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 21591 3763833 Suden_0014 Sulfurimonas denitrificans DSM 1251 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_392530.1 20848 D 326298 CDS YP_392531.1 78776216 3763834 21575..22222 1 NC_007575.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 22222 pcm 3763834 pcm Sulfurimonas denitrificans DSM 1251 protein-L-isoaspartate O-methyltransferase YP_392531.1 21575 D 326298 CDS YP_392532.1 78776217 3763835 22219..23298 1 NC_007575.1 phospholipase A1 23298 3763835 Suden_0016 Sulfurimonas denitrificans DSM 1251 phospholipase A1 YP_392532.1 22219 D 326298 CDS YP_392533.1 78776218 3763836 23358..24191 1 NC_007575.1 thymidylate synthase 24191 3763836 Suden_0017 Sulfurimonas denitrificans DSM 1251 thymidylate synthase YP_392533.1 23358 D 326298 CDS YP_392534.1 78776219 3763837 24196..24411 1 NC_007575.1 hypothetical protein 24411 3763837 Suden_0018 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392534.1 24196 D 326298 CDS YP_392535.1 78776220 3763838 24423..24977 1 NC_007575.1 PhnA protein 24977 3763838 Suden_0019 Sulfurimonas denitrificans DSM 1251 PhnA protein YP_392535.1 24423 D 326298 CDS YP_392536.1 78776221 3763839 24996..26159 1 NC_007575.1 diguanylate cyclase 26159 3763839 Suden_0020 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_392536.1 24996 D 326298 CDS YP_392537.1 78776222 3763840 26170..27267 1 NC_007575.1 deoxyguanosinetriphosphate triphosphohydrolase 27267 3763840 Suden_0021 Sulfurimonas denitrificans DSM 1251 deoxyguanosinetriphosphate triphosphohydrolase YP_392537.1 26170 D 326298 CDS YP_392538.1 78776223 3763841 complement(27313..27525) 1 NC_007575.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 27525 rpsU 3763841 rpsU Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S21 YP_392538.1 27313 R 326298 CDS YP_392539.1 78776224 3763842 27963..29615 1 NC_007575.1 synthesizes RNA primers at the replication forks; DNA primase 29615 dnaG 3763842 dnaG Sulfurimonas denitrificans DSM 1251 DNA primase YP_392539.1 27963 D 326298 CDS YP_392540.1 78776225 3763843 complement(29605..30627) 1 NC_007575.1 hypothetical protein 30627 3763843 Suden_0024 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392540.1 29605 R 326298 CDS YP_392541.1 78776226 3763860 30766..31962 1 NC_007575.1 DEAD/DEAH box helicase 31962 3763860 Suden_0025 Sulfurimonas denitrificans DSM 1251 DEAD/DEAH box helicase YP_392541.1 30766 D 326298 CDS YP_392542.1 78776227 3763861 32011..32991 1 NC_007575.1 thiamine biosynthesis protein:ExsB 32991 3763861 Suden_0026 Sulfurimonas denitrificans DSM 1251 thiamine biosynthesis protein:ExsB YP_392542.1 32011 D 326298 CDS YP_392543.1 78776228 3763862 33039..33455 1 NC_007575.1 hypothetical protein 33455 3763862 Suden_0027 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392543.1 33039 D 326298 CDS YP_392544.1 78776229 3763863 complement(33442..33681) 1 NC_007575.1 hypothetical protein 33681 3763863 Suden_0028 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392544.1 33442 R 326298 CDS YP_392545.1 78776230 3763864 33761..35395 1 NC_007575.1 flagellar hook-length control protein 35395 3763864 Suden_0029 Sulfurimonas denitrificans DSM 1251 flagellar hook-length control protein YP_392545.1 33761 D 326298 CDS YP_392546.1 78776231 3763865 35500..36165 1 NC_007575.1 flagellar hook capping protein 36165 3763865 Suden_0030 Sulfurimonas denitrificans DSM 1251 flagellar hook capping protein YP_392546.1 35500 D 326298 CDS YP_392547.1 78776232 3763866 36177..37469 1 NC_007575.1 hypothetical protein 37469 3763866 Suden_0031 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392547.1 36177 D 326298 CDS YP_392548.1 78776233 3763867 37633..39789 1 NC_007575.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 39789 flgE 3763867 flgE Sulfurimonas denitrificans DSM 1251 flagellar hook protein FlgE YP_392548.1 37633 D 326298 CDS YP_392549.1 78776234 3763868 39919..41082 1 NC_007575.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 41082 purT 3763868 purT Sulfurimonas denitrificans DSM 1251 phosphoribosylglycinamide formyltransferase 2 YP_392549.1 39919 D 326298 CDS YP_392550.1 78776235 3763869 41083..42018 1 NC_007575.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 42018 3763869 Suden_0034 Sulfurimonas denitrificans DSM 1251 2-hydroxyacid dehydrogenase YP_392550.1 41083 D 326298 CDS YP_392551.1 78776236 3763870 42048..42419 1 NC_007575.1 cytoplasmic membrane protein 42419 3763870 Suden_0035 Sulfurimonas denitrificans DSM 1251 cytoplasmic membrane protein YP_392551.1 42048 D 326298 CDS YP_392552.1 78776237 3763871 42449..45019 1 NC_007575.1 histidine kinase 45019 3763871 Suden_0036 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392552.1 42449 D 326298 CDS YP_392553.1 78776238 3763872 45009..46610 1 NC_007575.1 succinate dehydrogenase/fumarate reductase flavoprotein subunit 46610 3763872 Suden_0037 Sulfurimonas denitrificans DSM 1251 succinate dehydrogenase/fumarate reductase flavoprotein subunit YP_392553.1 45009 D 326298 CDS YP_392554.1 78776239 3763873 46600..47304 1 NC_007575.1 succinate dehydrogenase/fumarate reductase iron-sulfur protein 47304 3763873 Suden_0038 Sulfurimonas denitrificans DSM 1251 succinate dehydrogenase/fumarate reductase iron-sulfur protein YP_392554.1 46600 D 326298 CDS YP_392555.1 78776240 3763874 47477..47974 1 NC_007575.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 47974 3763874 Suden_0039 Sulfurimonas denitrificans DSM 1251 nucleotide-binding protein YP_392555.1 47477 D 326298 CDS YP_392556.1 78776241 3763875 47986..48654 1 NC_007575.1 hypothetical protein 48654 3763875 Suden_0040 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392556.1 47986 D 326298 CDS YP_392557.1 78776242 3763877 48904..49356 1 NC_007575.1 hypothetical protein 49356 3763877 Suden_0041 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392557.1 48904 D 326298 CDS YP_392558.1 78776243 3764743 complement(49359..50867) 1 NC_007575.1 radical SAM family protein 50867 3764743 Suden_0042 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392558.1 49359 R 326298 CDS YP_392559.1 78776244 3764744 complement(51033..52298) 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 52298 3764744 Suden_0043 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_392559.1 51033 R 326298 CDS YP_392560.1 78776245 3764745 complement(52327..52815) 1 NC_007575.1 PAS/PAC sensor protein 52815 3764745 Suden_0044 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_392560.1 52327 R 326298 CDS YP_392561.1 78776246 3764746 52872..54053 1 NC_007575.1 MFS metabolite transporter 54053 3764746 Suden_0045 Sulfurimonas denitrificans DSM 1251 MFS metabolite transporter YP_392561.1 52872 D 326298 CDS YP_392562.1 78776247 3764747 complement(54031..54837) 1 NC_007575.1 salt-induced outer membrane protein-like 54837 3764747 Suden_0046 Sulfurimonas denitrificans DSM 1251 salt-induced outer membrane protein-like YP_392562.1 54031 R 326298 CDS YP_392563.1 78776248 3764748 complement(54842..55654) 1 NC_007575.1 MscS mechanosensitive ion channel 55654 3764748 Suden_0047 Sulfurimonas denitrificans DSM 1251 MscS mechanosensitive ion channel YP_392563.1 54842 R 326298 CDS YP_392564.1 78776249 3764749 complement(55698..56027) 1 NC_007575.1 hypothetical protein 56027 3764749 Suden_0048 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392564.1 55698 R 326298 CDS YP_392565.1 78776250 3764750 complement(56020..56331) 1 NC_007575.1 hypothetical protein 56331 3764750 Suden_0049 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392565.1 56020 R 326298 CDS YP_392566.1 78776251 3764751 complement(56333..57082) 1 NC_007575.1 manganese transport system permease 57082 3764751 Suden_0050 Sulfurimonas denitrificans DSM 1251 manganese transport system permease YP_392566.1 56333 R 326298 CDS YP_392567.1 78776252 3764752 complement(57079..57957) 1 NC_007575.1 periplasmic solute binding protein 57957 3764752 Suden_0051 Sulfurimonas denitrificans DSM 1251 periplasmic solute binding protein YP_392567.1 57079 R 326298 CDS YP_392568.1 78776253 3764753 complement(58078..59361) 1 NC_007575.1 hypothetical protein 59361 3764753 Suden_0052 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392568.1 58078 R 326298 CDS YP_392569.1 78776254 3764754 complement(59422..59688) 1 NC_007575.1 hypothetical protein 59688 3764754 Suden_0053 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392569.1 59422 R 326298 CDS YP_392570.1 78776255 3764755 59899..60195 1 NC_007575.1 hypothetical protein 60195 3764755 Suden_0054 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392570.1 59899 D 326298 CDS YP_392571.1 78776256 3764756 60204..62282 1 NC_007575.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 62282 3764756 Suden_0055 Sulfurimonas denitrificans DSM 1251 phosphate acetyltransferase YP_392571.1 60204 D 326298 CDS YP_392572.1 78776257 3764757 62279..63448 1 NC_007575.1 acetate kinase 63448 3764757 Suden_0056 Sulfurimonas denitrificans DSM 1251 acetate kinase YP_392572.1 62279 D 326298 CDS YP_392573.1 78776258 3764758 complement(63445..63768) 1 NC_007575.1 hypothetical protein 63768 3764758 Suden_0057 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392573.1 63445 R 326298 CDS YP_392574.1 78776259 3764759 complement(63938..64621) 1 NC_007575.1 hypothetical protein 64621 3764759 Suden_0058 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392574.1 63938 R 326298 CDS YP_392575.1 78776260 3764760 64683..65339 1 NC_007575.1 hypothetical protein 65339 3764760 Suden_0059 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392575.1 64683 D 326298 CDS YP_392576.1 78776261 3764761 65336..65761 1 NC_007575.1 hypothetical protein 65761 3764761 Suden_0060 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392576.1 65336 D 326298 CDS YP_392577.1 78776262 3764762 65748..66719 1 NC_007575.1 hypothetical protein 66719 3764762 Suden_0061 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392577.1 65748 D 326298 CDS YP_392578.1 78776263 3763196 66729..67370 1 NC_007575.1 cobalamin (vitamin B12) biosynthesis protein CbiM 67370 3763196 Suden_0062 Sulfurimonas denitrificans DSM 1251 cobalamin (vitamin B12) biosynthesis protein CbiM YP_392578.1 66729 D 326298 CDS YP_392579.1 78776264 3763197 67363..67908 1 NC_007575.1 hypothetical protein 67908 3763197 Suden_0063 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392579.1 67363 D 326298 CDS YP_392580.1 78776265 3763198 67901..68683 1 NC_007575.1 ABC transporter-like protein 68683 3763198 Suden_0064 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_392580.1 67901 D 326298 CDS YP_392581.1 78776266 3763203 69380..71065 1 NC_007575.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 71065 3763203 Suden_0065 Sulfurimonas denitrificans DSM 1251 dihydroxy-acid dehydratase YP_392581.1 69380 D 326298 CDS YP_392582.1 78776267 3763204 71086..72894 1 NC_007575.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 72894 thrS 3763204 thrS Sulfurimonas denitrificans DSM 1251 threonyl-tRNA synthetase YP_392582.1 71086 D 326298 CDS YP_392583.1 78776268 3763205 72891..73409 1 NC_007575.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 73409 infC 3763205 infC Sulfurimonas denitrificans DSM 1251 translation initiation factor IF-3 YP_392583.1 72891 D 326298 CDS YP_392584.1 78776269 3763206 73591..75507 1 NC_007575.1 exo-beta-1,3-glucanase 75507 3763206 Suden_0068 Sulfurimonas denitrificans DSM 1251 exo-beta-1,3-glucanase YP_392584.1 73591 D 326298 CDS YP_392585.1 78776270 3763207 complement(75488..77257) 1 NC_007575.1 ABC transporter-like protein 77257 3763207 Suden_0069 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_392585.1 75488 R 326298 CDS YP_392586.1 78776271 3763208 complement(77263..78579) 1 NC_007575.1 major facilitator transporter 78579 3763208 Suden_0070 Sulfurimonas denitrificans DSM 1251 major facilitator transporter YP_392586.1 77263 R 326298 CDS YP_392587.1 78776272 3763209 78689..79288 1 NC_007575.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 79288 3763209 Suden_0071 Sulfurimonas denitrificans DSM 1251 deoxyribonucleotide triphosphate pyrophosphatase YP_392587.1 78689 D 326298 CDS YP_392588.1 78776273 3763210 complement(79420..80190) 1 NC_007575.1 undecaprenol kinase 80190 3763210 Suden_0072 Sulfurimonas denitrificans DSM 1251 undecaprenol kinase YP_392588.1 79420 R 326298 CDS YP_392589.1 78776274 3763788 80317..81429 1 NC_007575.1 class V aminotransferase 81429 3763788 Suden_0073 Sulfurimonas denitrificans DSM 1251 class V aminotransferase YP_392589.1 80317 D 326298 CDS YP_392590.1 78776275 3763789 81430..82278 1 NC_007575.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 82278 hisZ 3763789 hisZ Sulfurimonas denitrificans DSM 1251 ATP phosphoribosyltransferase YP_392590.1 81430 D 326298 CDS YP_392591.1 78776276 3763790 82325..83584 1 NC_007575.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 83584 3763790 Suden_0075 Sulfurimonas denitrificans DSM 1251 adenylosuccinate synthetase YP_392591.1 82325 D 326298 CDS YP_392592.1 78776277 3763791 83666..84040 1 NC_007575.1 hypothetical protein 84040 3763791 Suden_0076 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392592.1 83666 D 326298 CDS YP_392593.1 78776278 3763792 84037..84549 1 NC_007575.1 PDP protein 84549 3763792 Suden_0077 Sulfurimonas denitrificans DSM 1251 PDP protein YP_392593.1 84037 D 326298 CDS YP_392594.1 78776279 3763793 84610..86481 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 86481 3763793 Suden_0078 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_392594.1 84610 D 326298 CDS YP_392595.1 78776280 3763794 86546..87097 1 NC_007575.1 hypothetical protein 87097 3763794 Suden_0079 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392595.1 86546 D 326298 CDS YP_392596.1 78776281 3763795 87099..88244 1 NC_007575.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 88244 3763795 Suden_0080 Sulfurimonas denitrificans DSM 1251 carbamoyl phosphate synthase small subunit YP_392596.1 87099 D 326298 CDS YP_392597.1 78776282 3763796 88469..89962 1 NC_007575.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 89962 3763796 Suden_0081 Sulfurimonas denitrificans DSM 1251 cbb3-type cytochrome c oxidase subunit I YP_392597.1 88469 D 326298 CDS YP_392598.1 78776283 3763797 89978..90670 1 NC_007575.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 90670 3763797 Suden_0082 Sulfurimonas denitrificans DSM 1251 cbb3-type cytochrome c oxidase subunit II YP_392598.1 89978 D 326298 CDS YP_392599.1 78776284 3763798 90680..90883 1 NC_007575.1 cbb3-type cytochrome c oxidase subunit IV 90883 3763798 Suden_0083 Sulfurimonas denitrificans DSM 1251 cbb3-type cytochrome c oxidase subunit IV YP_392599.1 90680 D 326298 CDS YP_392600.1 78776285 3763799 90893..91816 1 NC_007575.1 Cbb3-type cytochrome c oxidase subunit III 91816 3763799 Suden_0084 Sulfurimonas denitrificans DSM 1251 Cbb3-type cytochrome c oxidase subunit III YP_392600.1 90893 D 326298 CDS YP_392601.1 78776286 3763800 91827..92036 1 NC_007575.1 hypothetical protein 92036 3763800 Suden_0085 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392601.1 91827 D 326298 CDS YP_392602.1 78776287 3763801 92144..92848 1 NC_007575.1 3-dehydroquinate dehydratase 92848 3763801 Suden_0086 Sulfurimonas denitrificans DSM 1251 3-dehydroquinate dehydratase YP_392602.1 92144 D 326298 CDS YP_392603.1 78776288 3763802 92835..93341 1 NC_007575.1 hypothetical protein 93341 3763802 Suden_0087 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392603.1 92835 D 326298 CDS YP_392604.1 78776289 3763803 93356..95701 1 NC_007575.1 hypothetical protein 95701 3763803 Suden_0088 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392604.1 93356 D 326298 CDS YP_392605.1 78776290 3763804 95702..95935 1 NC_007575.1 hypothetical protein 95935 3763804 Suden_0089 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392605.1 95702 D 326298 CDS YP_392606.1 78776291 3763805 95937..98648 1 NC_007575.1 recombination protein RecB 98648 3763805 Suden_0090 Sulfurimonas denitrificans DSM 1251 recombination protein RecB YP_392606.1 95937 D 326298 CDS YP_392607.1 78776292 3763806 98700..99212 1 NC_007575.1 NLP/P60 99212 3763806 Suden_0091 Sulfurimonas denitrificans DSM 1251 NLP/P60 YP_392607.1 98700 D 326298 CDS YP_392608.1 78776293 3763975 99332..99754 1 NC_007575.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 99754 rplM 3763975 rplM Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L13 YP_392608.1 99332 D 326298 CDS YP_392609.1 78776294 3763976 99765..100154 1 NC_007575.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 100154 rpsI 3763976 rpsI Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S9 YP_392609.1 99765 D 326298 CDS YP_392610.1 78776295 3763977 100269..101765 1 NC_007575.1 ABC transporter substrate-binding protein 101765 3763977 Suden_0094 Sulfurimonas denitrificans DSM 1251 ABC transporter substrate-binding protein YP_392610.1 100269 D 326298 CDS YP_392611.1 78776296 3763978 101767..102405 1 NC_007575.1 HAD family hydrolase 102405 3763978 Suden_0095 Sulfurimonas denitrificans DSM 1251 HAD family hydrolase YP_392611.1 101767 D 326298 CDS YP_392612.1 78776297 3763979 102533..103090 1 NC_007575.1 pyruvate flavodoxin oxidoreductase subunit gamma 103090 3763979 Suden_0096 Sulfurimonas denitrificans DSM 1251 pyruvate flavodoxin oxidoreductase subunit gamma YP_392612.1 102533 D 326298 CDS YP_392613.1 78776298 3763980 103101..103496 1 NC_007575.1 pyruvate flavodoxin oxidoreductase subunit delta 103496 porD 3763980 porD Sulfurimonas denitrificans DSM 1251 pyruvate flavodoxin oxidoreductase subunit delta YP_392613.1 103101 D 326298 CDS YP_392614.1 78776299 3763981 103496..104719 1 NC_007575.1 pyruvate flavodoxin oxidoreductase subunit alpha 104719 porA 3763981 porA Sulfurimonas denitrificans DSM 1251 pyruvate flavodoxin oxidoreductase subunit alpha YP_392614.1 103496 D 326298 CDS YP_392615.1 78776300 3763982 104730..105686 1 NC_007575.1 pyruvate flavodoxin oxidoreductase subunit beta 105686 3763982 Suden_0099 Sulfurimonas denitrificans DSM 1251 pyruvate flavodoxin oxidoreductase subunit beta YP_392615.1 104730 D 326298 CDS YP_392616.1 78776301 3763983 106659..106982 1 NC_007575.1 nitrate transporter 106982 3763983 Suden_0100 Sulfurimonas denitrificans DSM 1251 nitrate transporter YP_392616.1 106659 D 326298 CDS YP_392617.1 78776302 3763984 107076..107408 1 NC_007575.1 nitrate transporter 107408 3763984 Suden_0101 Sulfurimonas denitrificans DSM 1251 nitrate transporter YP_392617.1 107076 D 326298 CDS YP_392618.1 78776303 3763985 complement(107403..107579) 1 NC_007575.1 molybdopterin oxidoreductase Fe4S4 region 107579 3763985 Suden_0102 Sulfurimonas denitrificans DSM 1251 molybdopterin oxidoreductase Fe4S4 region YP_392618.1 107403 R 326298 CDS YP_392619.1 78776304 3763986 107741..108334 1 NC_007575.1 hypothetical protein 108334 3763986 Suden_0103 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392619.1 107741 D 326298 CDS YP_392620.1 78776305 3763987 108331..109968 1 NC_007575.1 cytochrome c oxidase subunit I 109968 3763987 Suden_0104 Sulfurimonas denitrificans DSM 1251 cytochrome c oxidase subunit I YP_392620.1 108331 D 326298 CDS YP_392621.1 78776306 3763988 109984..110580 1 NC_007575.1 hypothetical protein 110580 3763988 Suden_0105 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392621.1 109984 D 326298 CDS YP_392622.1 78776307 3763989 complement(110736..113744) 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 113744 3763989 Suden_0106 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_392622.1 110736 R 326298 CDS YP_392623.1 78776308 3763990 complement(113806..114816) 1 NC_007575.1 hypothetical protein 114816 3763990 Suden_0107 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392623.1 113806 R 326298 CDS YP_392624.1 78776309 3763991 complement(114848..115723) 1 NC_007575.1 MscS mechanosensitive ion channel 115723 3763991 Suden_0108 Sulfurimonas denitrificans DSM 1251 MscS mechanosensitive ion channel YP_392624.1 114848 R 326298 CDS YP_392625.1 78776310 3763992 complement(115738..116967) 1 NC_007575.1 hypothetical protein 116967 3763992 Suden_0109 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392625.1 115738 R 326298 CDS YP_392626.1 78776311 3763993 complement(117004..117540) 1 NC_007575.1 phosphoglycerate/bisphosphoglycerate mutase 117540 3763993 Suden_0110 Sulfurimonas denitrificans DSM 1251 phosphoglycerate/bisphosphoglycerate mutase YP_392626.1 117004 R 326298 CDS YP_392627.1 78776312 3763994 complement(117537..118259) 1 NC_007575.1 cobalamin-5-phosphate synthase CobS 118259 3763994 Suden_0111 Sulfurimonas denitrificans DSM 1251 cobalamin-5-phosphate synthase CobS YP_392627.1 117537 R 326298 CDS YP_392628.1 78776313 3763211 complement(118256..118753) 1 NC_007575.1 adenosylcobinamide kinase 118753 3763211 Suden_0112 Sulfurimonas denitrificans DSM 1251 adenosylcobinamide kinase YP_392628.1 118256 R 326298 CDS YP_392629.1 78776314 3763212 complement(118825..119253) 1 NC_007575.1 hypothetical protein 119253 3763212 Suden_0113 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392629.1 118825 R 326298 CDS YP_392630.1 78776315 3763213 complement(119250..120860) 1 NC_007575.1 hypothetical protein 120860 3763213 Suden_0114 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392630.1 119250 R 326298 CDS YP_392631.1 78776316 3763214 complement(120857..121819) 1 NC_007575.1 transport system permease 121819 3763214 Suden_0115 Sulfurimonas denitrificans DSM 1251 transport system permease YP_392631.1 120857 R 326298 CDS YP_392632.1 78776317 3763215 complement(121812..122537) 1 NC_007575.1 ABC transporter-like protein 122537 3763215 Suden_0116 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_392632.1 121812 R 326298 CDS YP_392633.1 78776318 3763216 complement(122534..123346) 1 NC_007575.1 periplasmic binding protein 123346 3763216 Suden_0117 Sulfurimonas denitrificans DSM 1251 periplasmic binding protein YP_392633.1 122534 R 326298 CDS YP_392634.1 78776319 3763217 complement(123356..125257) 1 NC_007575.1 TonB-dependent receptor 125257 3763217 Suden_0118 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_392634.1 123356 R 326298 CDS YP_392635.1 78776320 3763218 complement(125282..125623) 1 NC_007575.1 hypothetical protein 125623 3763218 Suden_0119 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392635.1 125282 R 326298 CDS YP_392636.1 78776321 3763219 125970..126179 1 NC_007575.1 hypothetical protein 126179 3763219 Suden_0120 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392636.1 125970 D 326298 CDS YP_392637.1 78776322 3763220 126182..127369 1 NC_007575.1 DNA (cytosine-5-)-methyltransferase 127369 3763220 Suden_0121 Sulfurimonas denitrificans DSM 1251 DNA (cytosine-5-)-methyltransferase YP_392637.1 126182 D 326298 CDS YP_392638.1 78776323 3763221 127369..128406 1 NC_007575.1 hypothetical protein 128406 3763221 Suden_0122 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392638.1 127369 D 326298 CDS YP_392639.1 78776324 3763222 128614..129939 1 NC_007575.1 hypothetical protein 129939 3763222 Suden_0123 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392639.1 128614 D 326298 CDS YP_392640.1 78776325 3763223 130000..130308 1 NC_007575.1 hypothetical protein 130308 3763223 Suden_0124 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392640.1 130000 D 326298 CDS YP_392641.1 78776326 3763224 130346..131101 1 NC_007575.1 phosphatidate cytidylyltransferase 131101 3763224 Suden_0125 Sulfurimonas denitrificans DSM 1251 phosphatidate cytidylyltransferase YP_392641.1 130346 D 326298 CDS YP_392642.1 78776327 3763225 131105..132166 1 NC_007575.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 132166 3763225 Suden_0126 Sulfurimonas denitrificans DSM 1251 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_392642.1 131105 D 326298 CDS YP_392643.1 78776328 3763226 132163..132357 1 NC_007575.1 hypothetical protein 132357 3763226 Suden_0127 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392643.1 132163 D 326298 CDS YP_392644.1 78776329 3763227 132509..133609 1 NC_007575.1 type II site-specific deoxyribonuclease 133609 3763227 Suden_0128 Sulfurimonas denitrificans DSM 1251 type II site-specific deoxyribonuclease YP_392644.1 132509 D 326298 CDS YP_392645.1 78776330 3763228 133609..135210 1 NC_007575.1 N-6 DNA methylase 135210 3763228 Suden_0129 Sulfurimonas denitrificans DSM 1251 N-6 DNA methylase YP_392645.1 133609 D 326298 CDS YP_392646.1 78776331 3763229 135212..136222 1 NC_007575.1 site-specific DNA-methyltransferase (adenine-specific) 136222 3763229 Suden_0130 Sulfurimonas denitrificans DSM 1251 site-specific DNA-methyltransferase (adenine-specific) YP_392646.1 135212 D 326298 CDS YP_392647.1 78776332 3763748 136219..137196 1 NC_007575.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 137196 3763748 Suden_0131 Sulfurimonas denitrificans DSM 1251 DNA-binding/iron metalloprotein/AP endonuclease YP_392647.1 136219 D 326298 CDS YP_392648.1 78776333 3763749 137315..137818 1 NC_007575.1 atypical 2-Cys peroxiredoxin; thiol peroxidase 137818 3763749 Suden_0132 Sulfurimonas denitrificans DSM 1251 thiol peroxidase YP_392648.1 137315 D 326298 CDS YP_392649.1 78776334 3763750 137994..138746 1 NC_007575.1 hypothetical protein 138746 3763750 Suden_0133 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392649.1 137994 D 326298 CDS YP_392650.1 78776335 3763751 complement(138753..139304) 1 NC_007575.1 N-acetyltransferase 139304 3763751 Suden_0134 Sulfurimonas denitrificans DSM 1251 N-acetyltransferase YP_392650.1 138753 R 326298 CDS YP_392651.1 78776336 3763752 complement(139311..141284) 1 NC_007575.1 competence protein ComEA helix-hairpin-helix domain-containing protein 141284 3763752 Suden_0135 Sulfurimonas denitrificans DSM 1251 competence protein ComEA helix-hairpin-helix domain-containing protein YP_392651.1 139311 R 326298 CDS YP_392652.1 78776337 3763753 complement(141403..142317) 1 NC_007575.1 hypothetical protein 142317 3763753 Suden_0136 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392652.1 141403 R 326298 CDS YP_392653.1 78776338 3763754 142395..143744 1 NC_007575.1 hypothetical protein 143744 3763754 Suden_0137 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392653.1 142395 D 326298 CDS YP_392654.1 78776339 3763755 143741..143992 1 NC_007575.1 FlhB domain-containing protein 143992 3763755 Suden_0138 Sulfurimonas denitrificans DSM 1251 FlhB domain-containing protein YP_392654.1 143741 D 326298 CDS YP_392655.1 78776340 3763756 complement(143998..144222) 1 NC_007575.1 hypothetical protein 144222 3763756 Suden_0139 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392655.1 143998 R 326298 CDS YP_392656.1 78776341 3763757 complement(144244..145467) 1 NC_007575.1 hypothetical protein 145467 3763757 Suden_0140 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392656.1 144244 R 326298 CDS YP_392657.1 78776342 3763758 145563..146936 1 NC_007575.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 146936 3763758 Suden_0141 Sulfurimonas denitrificans DSM 1251 ATP-dependent RNA helicase DbpA YP_392657.1 145563 D 326298 CDS YP_392658.1 78776343 3763759 146975..147436 1 NC_007575.1 metal-dependent hydrolase 147436 3763759 Suden_0142 Sulfurimonas denitrificans DSM 1251 metal-dependent hydrolase YP_392658.1 146975 D 326298 CDS YP_392659.1 78776344 3763760 complement(147440..149275) 1 NC_007575.1 ABC transporter-like protein 149275 3763760 Suden_0143 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_392659.1 147440 R 326298 CDS YP_392660.1 78776345 3763761 complement(149292..149822) 1 NC_007575.1 hypothetical protein 149822 3763761 Suden_0144 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392660.1 149292 R 326298 CDS YP_392661.1 78776346 3763762 complement(149819..151207) 1 NC_007575.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 151207 gltX 3763762 gltX Sulfurimonas denitrificans DSM 1251 glutamyl-tRNA synthetase YP_392661.1 149819 R 326298 CDS YP_392662.1 78776347 3763763 151299..152135 1 NC_007575.1 hypothetical protein 152135 3763763 Suden_0146 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392662.1 151299 D 326298 CDS YP_392663.1 78776348 3763764 152136..152573 1 NC_007575.1 zinc-binding CMP/dCMP deaminase 152573 3763764 Suden_0147 Sulfurimonas denitrificans DSM 1251 zinc-binding CMP/dCMP deaminase YP_392663.1 152136 D 326298 CDS YP_392664.1 78776349 3763765 152577..153122 1 NC_007575.1 hypothetical protein 153122 3763765 Suden_0148 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392664.1 152577 D 326298 CDS YP_392665.1 78776350 3763766 complement(153119..153472) 1 NC_007575.1 arsenate reductase 153472 3763766 Suden_0149 Sulfurimonas denitrificans DSM 1251 arsenate reductase YP_392665.1 153119 R 326298 CDS YP_392666.1 78776351 3763767 153538..153993 1 NC_007575.1 hypothetical protein 153993 3763767 Suden_0150 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392666.1 153538 D 326298 CDS YP_392667.1 78776352 3763101 complement(153990..154418) 1 NC_007575.1 CDP-alcohol phosphatidyltransferase 154418 3763101 Suden_0151 Sulfurimonas denitrificans DSM 1251 CDP-alcohol phosphatidyltransferase YP_392667.1 153990 R 326298 CDS YP_392668.1 78776353 3763102 complement(154426..154830) 1 NC_007575.1 BadM/Rrf2 family transcriptional regulator 154830 3763102 Suden_0152 Sulfurimonas denitrificans DSM 1251 BadM/Rrf2 family transcriptional regulator YP_392668.1 154426 R 326298 CDS YP_392669.1 78776354 3763103 155049..155507 1 NC_007575.1 hypothetical protein 155507 3763103 Suden_0153 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392669.1 155049 D 326298 CDS YP_392670.1 78776355 3763104 155504..156427 1 NC_007575.1 cysteine synthase 156427 3763104 Suden_0154 Sulfurimonas denitrificans DSM 1251 cysteine synthase YP_392670.1 155504 D 326298 CDS YP_392671.1 78776356 3763105 156433..156663 1 NC_007575.1 hypothetical protein 156663 3763105 Suden_0155 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392671.1 156433 D 326298 CDS YP_392672.1 78776357 3763106 156676..157392 1 NC_007575.1 phosphoadenosine phosphosulfate reductase 157392 3763106 Suden_0156 Sulfurimonas denitrificans DSM 1251 phosphoadenosine phosphosulfate reductase YP_392672.1 156676 D 326298 CDS YP_392673.1 78776358 3763107 157386..158297 1 NC_007575.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 158297 3763107 Suden_0157 Sulfurimonas denitrificans DSM 1251 sulfate adenylyltransferase subunit 2 YP_392673.1 157386 D 326298 CDS YP_392674.1 78776359 3763108 158299..159711 1 NC_007575.1 sulfate adenylyltransferase 159711 3763108 Suden_0158 Sulfurimonas denitrificans DSM 1251 sulfate adenylyltransferase YP_392674.1 158299 D 326298 CDS YP_392675.1 78776360 3763109 159721..161280 1 NC_007575.1 ferredoxin--nitrite reductase 161280 3763109 Suden_0159 Sulfurimonas denitrificans DSM 1251 ferredoxin--nitrite reductase YP_392675.1 159721 D 326298 CDS YP_392676.1 78776361 3763110 161273..162601 1 NC_007575.1 aminotransferase 162601 3763110 Suden_0160 Sulfurimonas denitrificans DSM 1251 aminotransferase YP_392676.1 161273 D 326298 CDS YP_392677.1 78776362 3763111 162700..163581 1 NC_007575.1 hypothetical protein 163581 3763111 Suden_0161 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392677.1 162700 D 326298 CDS YP_392678.1 78776363 3763112 163617..164294 1 NC_007575.1 carbonate dehydratase 164294 3763112 Suden_0162 Sulfurimonas denitrificans DSM 1251 carbonate dehydratase YP_392678.1 163617 D 326298 CDS YP_392679.1 78776364 3763113 complement(164289..166094) 1 NC_007575.1 asparagine synthase 166094 3763113 Suden_0163 Sulfurimonas denitrificans DSM 1251 asparagine synthase YP_392679.1 164289 R 326298 CDS YP_392680.1 78776365 3763114 complement(166094..166681) 1 NC_007575.1 hypothetical protein 166681 3763114 Suden_0164 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392680.1 166094 R 326298 CDS YP_392681.1 78776366 3763115 166808..167761 1 NC_007575.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 167761 3763115 Suden_0165 Sulfurimonas denitrificans DSM 1251 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_392681.1 166808 D 326298 CDS YP_392682.1 78776367 3763116 complement(167766..168170) 1 NC_007575.1 hypothetical protein 168170 3763116 Suden_0166 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392682.1 167766 R 326298 CDS YP_392683.1 78776368 3763117 complement(168167..168619) 1 NC_007575.1 hypothetical protein 168619 3763117 Suden_0167 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392683.1 168167 R 326298 CDS YP_392684.1 78776369 3763118 complement(168612..169775) 1 NC_007575.1 Sodium/hydrogen exchanger 169775 3763118 Suden_0168 Sulfurimonas denitrificans DSM 1251 Sodium/hydrogen exchanger YP_392684.1 168612 R 326298 CDS YP_392685.1 78776370 3763119 complement(169779..170624) 1 NC_007575.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 170624 3763119 Suden_0169 Sulfurimonas denitrificans DSM 1251 biotin synthase YP_392685.1 169779 R 326298 CDS YP_392686.1 78776371 3764611 complement(170621..171142) 1 NC_007575.1 hypothetical protein 171142 3764611 Suden_0170 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392686.1 170621 R 326298 CDS YP_392687.1 78776372 3764612 complement(171145..173376) 1 NC_007575.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 173376 3764612 Suden_0171 Sulfurimonas denitrificans DSM 1251 DNA topoisomerase I YP_392687.1 171145 R 326298 CDS YP_392688.1 78776373 3764613 173585..174763 1 NC_007575.1 flagellin-like protein 174763 3764613 Suden_0172 Sulfurimonas denitrificans DSM 1251 flagellin-like protein YP_392688.1 173585 D 326298 CDS YP_392689.1 78776374 3764614 174976..176154 1 NC_007575.1 flagellin-like protein 176154 3764614 Suden_0173 Sulfurimonas denitrificans DSM 1251 flagellin-like protein YP_392689.1 174976 D 326298 CDS YP_392690.1 78776375 3764615 complement(176198..178186) 1 NC_007575.1 hypothetical protein 178186 3764615 Suden_0174 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392690.1 176198 R 326298 CDS YP_392691.1 78776376 3764616 complement(178232..178936) 1 NC_007575.1 nucleotidyl transferase 178936 3764616 Suden_0175 Sulfurimonas denitrificans DSM 1251 nucleotidyl transferase YP_392691.1 178232 R 326298 CDS YP_392692.1 78776377 3764617 complement(178933..180342) 1 NC_007575.1 cytidyltransferase-related 180342 3764617 Suden_0176 Sulfurimonas denitrificans DSM 1251 cytidyltransferase-related YP_392692.1 178933 R 326298 CDS YP_392693.1 78776378 3764618 complement(180351..181469) 1 NC_007575.1 radical SAM family protein 181469 3764618 Suden_0177 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392693.1 180351 R 326298 CDS YP_392694.1 78776379 3764619 complement(181447..181746) 1 NC_007575.1 hypothetical protein 181746 3764619 Suden_0178 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392694.1 181447 R 326298 CDS YP_392695.1 78776380 3764620 complement(181752..182741) 1 NC_007575.1 NAD-dependent epimerase/dehydratase 182741 3764620 Suden_0179 Sulfurimonas denitrificans DSM 1251 NAD-dependent epimerase/dehydratase YP_392695.1 181752 R 326298 CDS YP_392696.1 78776381 3764621 complement(182741..183229) 1 NC_007575.1 transketolase, central region 183229 3764621 Suden_0180 Sulfurimonas denitrificans DSM 1251 transketolase, central region YP_392696.1 182741 R 326298 CDS YP_392697.1 78776382 3764622 complement(183222..184019) 1 NC_007575.1 transketolase 184019 3764622 Suden_0181 Sulfurimonas denitrificans DSM 1251 transketolase YP_392697.1 183222 R 326298 CDS YP_392698.1 78776383 3764623 complement(184031..185140) 1 NC_007575.1 radical SAM family protein 185140 3764623 Suden_0182 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392698.1 184031 R 326298 CDS YP_392699.1 78776384 3764624 complement(185118..186533) 1 NC_007575.1 hypothetical protein 186533 3764624 Suden_0183 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392699.1 185118 R 326298 CDS YP_392700.1 78776385 3764625 186598..187152 1 NC_007575.1 sugar isomerase (SIS) 187152 3764625 Suden_0184 Sulfurimonas denitrificans DSM 1251 sugar isomerase (SIS) YP_392700.1 186598 D 326298 CDS YP_392701.1 78776386 3764626 complement(187149..188201) 1 NC_007575.1 hypothetical protein 188201 3764626 Suden_0185 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392701.1 187149 R 326298 CDS YP_392702.1 78776387 3764627 complement(188202..189953) 1 NC_007575.1 asparagine synthase 189953 3764627 Suden_0186 Sulfurimonas denitrificans DSM 1251 asparagine synthase YP_392702.1 188202 R 326298 CDS YP_392703.1 78776388 3764628 complement(189941..191071) 1 NC_007575.1 group 1 glycosyl transferase 191071 3764628 Suden_0187 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_392703.1 189941 R 326298 CDS YP_392704.1 78776389 3764629 191250..192089 1 NC_007575.1 radical SAM family protein 192089 3764629 Suden_0188 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392704.1 191250 D 326298 CDS YP_392705.1 78776390 3764630 192095..192922 1 NC_007575.1 ubiquinone/menaquinone biosynthesis methyltransferase 192922 3764630 Suden_0189 Sulfurimonas denitrificans DSM 1251 ubiquinone/menaquinone biosynthesis methyltransferase YP_392705.1 192095 D 326298 CDS YP_392706.1 78776391 3764169 192919..194100 1 NC_007575.1 DegT/DnrJ/EryC1/StrS aminotransferase 194100 3764169 Suden_0190 Sulfurimonas denitrificans DSM 1251 DegT/DnrJ/EryC1/StrS aminotransferase YP_392706.1 192919 D 326298 CDS YP_392707.1 78776392 3764170 complement(194070..195164) 1 NC_007575.1 group 1 glycosyl transferase 195164 3764170 Suden_0191 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_392707.1 194070 R 326298 CDS YP_392708.1 78776393 3764171 complement(195165..195890) 1 NC_007575.1 hypothetical protein 195890 3764171 Suden_0192 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392708.1 195165 R 326298 CDS YP_392709.1 78776394 3764172 complement(195874..196968) 1 NC_007575.1 group 1 glycosyl transferase 196968 3764172 Suden_0193 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_392709.1 195874 R 326298 CDS YP_392710.1 78776395 3764173 complement(196965..197879) 1 NC_007575.1 hypothetical protein 197879 3764173 Suden_0194 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392710.1 196965 R 326298 CDS YP_392711.1 78776396 3764174 complement(197882..198910) 1 NC_007575.1 radical SAM family protein 198910 3764174 Suden_0195 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392711.1 197882 R 326298 CDS YP_392712.1 78776397 3764175 complement(198900..200429) 1 NC_007575.1 hypothetical protein 200429 3764175 Suden_0196 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392712.1 198900 R 326298 CDS YP_392713.1 78776398 3764176 complement(200430..201533) 1 NC_007575.1 radical SAM family protein 201533 3764176 Suden_0197 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_392713.1 200430 R 326298 CDS YP_392714.1 78776399 3764177 complement(201533..202288) 1 NC_007575.1 ubiquinone/menaquinone biosynthesis methyltransferase 202288 3764177 Suden_0198 Sulfurimonas denitrificans DSM 1251 ubiquinone/menaquinone biosynthesis methyltransferase YP_392714.1 201533 R 326298 CDS YP_392715.1 78776400 3764178 complement(202292..203314) 1 NC_007575.1 hypothetical protein 203314 3764178 Suden_0199 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392715.1 202292 R 326298 CDS YP_392716.1 78776401 3764179 complement(203307..205274) 1 NC_007575.1 asparagine synthase 205274 3764179 Suden_0200 Sulfurimonas denitrificans DSM 1251 asparagine synthase YP_392716.1 203307 R 326298 CDS YP_392717.1 78776402 3764180 complement(205276..207390) 1 NC_007575.1 hypothetical protein 207390 3764180 Suden_0201 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392717.1 205276 R 326298 CDS YP_392718.1 78776403 3764181 complement(207399..208787) 1 NC_007575.1 flagellar hook-associated protein 2-like protein 208787 3764181 Suden_0202 Sulfurimonas denitrificans DSM 1251 flagellar hook-associated protein 2-like protein YP_392718.1 207399 R 326298 CDS YP_392719.1 78776404 3764182 208925..209323 1 NC_007575.1 flagellin specific chaperone; flagellar protein FliS 209323 fliS 3764182 fliS Sulfurimonas denitrificans DSM 1251 flagellar protein FliS YP_392719.1 208925 D 326298 CDS YP_392720.1 78776405 3764183 209324..209578 1 NC_007575.1 hypothetical protein 209578 3764183 Suden_0204 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392720.1 209324 D 326298 CDS YP_392721.1 78776406 3764185 complement(209852..210082) 1 NC_007575.1 hypothetical protein 210082 3764185 Suden_0205 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392721.1 209852 R 326298 CDS YP_392722.1 78776407 3764186 210149..210340 1 NC_007575.1 50S ribosomal protein L35 210340 rpmI 3764186 rpmI Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L35 YP_392722.1 210149 D 326298 CDS YP_392723.1 78776408 3763120 210448..210804 1 NC_007575.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 210804 rplT 3763120 rplT Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L20 YP_392723.1 210448 D 326298 CDS YP_392724.1 78776409 3763121 complement(210856..212550) 1 NC_007575.1 response regulator receiver domain-containing protein 212550 3763121 Suden_0208 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_392724.1 210856 R 326298 CDS YP_392725.1 78776410 3763122 complement(212550..214526) 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 214526 3763122 Suden_0209 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_392725.1 212550 R 326298 CDS YP_392726.1 78776411 3763123 complement(214526..214816) 1 NC_007575.1 hypothetical protein 214816 3763123 Suden_0210 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392726.1 214526 R 326298 CDS YP_392727.1 78776412 3763124 complement(214898..216079) 1 NC_007575.1 central region; recombination factor protein RarA 216079 3763124 Suden_0211 Sulfurimonas denitrificans DSM 1251 recombination factor protein RarA YP_392727.1 214898 R 326298 CDS YP_392728.1 78776413 3763125 complement(216083..217021) 1 NC_007575.1 pseudouridine synthase 217021 3763125 Suden_0212 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_392728.1 216083 R 326298 CDS YP_392729.1 78776414 3763126 complement(217018..217980) 1 NC_007575.1 KpsF/GutQ 217980 3763126 Suden_0213 Sulfurimonas denitrificans DSM 1251 KpsF/GutQ YP_392729.1 217018 R 326298 CDS YP_392730.1 78776415 3763127 complement(218027..219043) 1 NC_007575.1 cytochrome-c peroxidase 219043 3763127 Suden_0214 Sulfurimonas denitrificans DSM 1251 cytochrome-c peroxidase YP_392730.1 218027 R 326298 CDS YP_392731.1 78776416 3763128 219227..219961 1 NC_007575.1 hypothetical protein 219961 3763128 Suden_0215 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392731.1 219227 D 326298 CDS YP_392732.1 78776417 3763129 219964..221328 1 NC_007575.1 hypothetical protein 221328 3763129 Suden_0216 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392732.1 219964 D 326298 CDS YP_392733.1 78776418 3763130 221374..222153 1 NC_007575.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 222153 thiG 3763130 thiG Sulfurimonas denitrificans DSM 1251 thiazole synthase YP_392733.1 221374 D 326298 CDS YP_392734.1 78776419 3763131 complement(222150..223064) 1 NC_007575.1 diguanylate cyclase 223064 3763131 Suden_0218 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_392734.1 222150 R 326298 CDS YP_392735.1 78776420 3763132 complement(223061..227419) 1 NC_007575.1 multi-sensor hybrid histidine kinase 227419 3763132 Suden_0219 Sulfurimonas denitrificans DSM 1251 multi-sensor hybrid histidine kinase YP_392735.1 223061 R 326298 CDS YP_392736.1 78776421 3763133 complement(227596..229215) 1 NC_007575.1 diguanylate cyclase 229215 3763133 Suden_0220 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_392736.1 227596 R 326298 CDS YP_392737.1 78776422 3763134 complement(229251..229526) 1 NC_007575.1 hypothetical protein 229526 3763134 Suden_0221 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392737.1 229251 R 326298 CDS YP_392738.1 78776423 3763135 complement(229523..230968) 1 NC_007575.1 Sodium:alanine symporter 230968 3763135 Suden_0222 Sulfurimonas denitrificans DSM 1251 Sodium:alanine symporter YP_392738.1 229523 R 326298 CDS YP_392739.1 78776424 3763386 complement(233117..234271) 1 NC_007575.1 hypothetical protein 234271 3763386 Suden_0223 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392739.1 233117 R 326298 CDS YP_392740.1 78776425 3763387 235156..236025 1 NC_007575.1 hypothetical protein 236025 3763387 Suden_0224 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392740.1 235156 D 326298 CDS YP_392741.1 78776426 3763388 complement(236216..236479) 1 NC_007575.1 hypothetical protein 236479 3763388 Suden_0225 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392741.1 236216 R 326298 CDS YP_392742.1 78776427 3763389 236707..236982 1 NC_007575.1 hypothetical protein 236982 3763389 Suden_0226 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392742.1 236707 D 326298 CDS YP_392743.1 78776428 3763390 complement(236979..238109) 1 NC_007575.1 Fic family protein 238109 3763390 Suden_0227 Sulfurimonas denitrificans DSM 1251 Fic family protein YP_392743.1 236979 R 326298 CDS YP_392744.1 78776429 3763391 238230..238643 1 NC_007575.1 hypothetical protein 238643 3763391 Suden_0228 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392744.1 238230 D 326298 CDS YP_392745.1 78776430 3763392 238651..239148 1 NC_007575.1 hypothetical protein 239148 3763392 Suden_0229 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392745.1 238651 D 326298 CDS YP_392746.1 78776431 3763393 239224..239646 1 NC_007575.1 hypothetical protein 239646 3763393 Suden_0230 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392746.1 239224 D 326298 CDS YP_392747.1 78776432 3763394 239906..240190 1 NC_007575.1 hypothetical protein 240190 3763394 Suden_0231 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392747.1 239906 D 326298 CDS YP_392748.1 78776433 3763395 240196..240375 1 NC_007575.1 hypothetical protein 240375 3763395 Suden_0232 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392748.1 240196 D 326298 CDS YP_392749.1 78776434 3763396 240410..240655 1 NC_007575.1 hypothetical protein 240655 3763396 Suden_0233 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392749.1 240410 D 326298 CDS YP_392750.1 78776435 3763397 complement(240717..240968) 1 NC_007575.1 XRE family transcriptional regulator 240968 3763397 Suden_0234 Sulfurimonas denitrificans DSM 1251 XRE family transcriptional regulator YP_392750.1 240717 R 326298 CDS YP_392751.1 78776436 3763398 241091..241450 1 NC_007575.1 hypothetical protein 241450 3763398 Suden_0235 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392751.1 241091 D 326298 CDS YP_392752.1 78776437 3764631 241524..242681 1 NC_007575.1 hypothetical protein 242681 3764631 Suden_0236 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392752.1 241524 D 326298 CDS YP_392753.1 78776438 3764632 243104..244984 1 NC_007575.1 hypothetical protein 244984 3764632 Suden_0237 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392753.1 243104 D 326298 CDS YP_392754.1 78776439 3764633 245096..246103 1 NC_007575.1 hypothetical protein 246103 3764633 Suden_0238 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392754.1 245096 D 326298 CDS YP_392755.1 78776440 3764634 246116..247855 1 NC_007575.1 hypothetical protein 247855 3764634 Suden_0239 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392755.1 246116 D 326298 CDS YP_392756.1 78776441 3764635 247907..253171 1 NC_007575.1 DNA helicase 253171 3764635 Suden_0240 Sulfurimonas denitrificans DSM 1251 DNA helicase YP_392756.1 247907 D 326298 CDS YP_392757.1 78776442 3764636 complement(253559..254692) 1 NC_007575.1 Phage integrase 254692 3764636 Suden_0241 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_392757.1 253559 R 326298 CDS YP_392758.1 78776443 3764637 complement(254763..256343) 1 NC_007575.1 HipA-like protein 256343 3764637 Suden_0242 Sulfurimonas denitrificans DSM 1251 HipA-like protein YP_392758.1 254763 R 326298 CDS YP_392759.1 78776444 3764638 complement(257213..259519) 1 NC_007575.1 hemolysin-type calcium-binding region 259519 3764638 Suden_0243 Sulfurimonas denitrificans DSM 1251 hemolysin-type calcium-binding region YP_392759.1 257213 R 326298 CDS YP_392760.1 78776445 3764639 complement(259538..260059) 1 NC_007575.1 hypothetical protein 260059 3764639 Suden_0244 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392760.1 259538 R 326298 CDS YP_392761.1 78776446 3764640 complement(260154..261116) 1 NC_007575.1 hypothetical protein 261116 3764640 Suden_0245 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392761.1 260154 R 326298 CDS YP_392762.1 78776447 3764641 complement(261123..262403) 1 NC_007575.1 hypothetical protein 262403 3764641 Suden_0246 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392762.1 261123 R 326298 CDS YP_392763.1 78776448 3764642 262552..263232 1 NC_007575.1 two component transcriptional regulator 263232 3764642 Suden_0247 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_392763.1 262552 D 326298 CDS YP_392764.1 78776449 3764643 complement(263206..266403) 1 NC_007575.1 histidine kinase 266403 3764643 Suden_0248 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392764.1 263206 R 326298 CDS YP_392765.1 78776450 3764644 complement(266655..267632) 1 NC_007575.1 hypothetical protein 267632 3764644 Suden_0249 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392765.1 266655 R 326298 CDS YP_392766.1 78776451 3764645 complement(267668..268468) 1 NC_007575.1 hypothetical protein 268468 3764645 Suden_0250 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392766.1 267668 R 326298 CDS YP_392767.1 78776452 3764646 complement(268646..269110) 1 NC_007575.1 hypothetical protein 269110 3764646 Suden_0251 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392767.1 268646 R 326298 CDS YP_392768.1 78776453 3764647 complement(269104..269754) 1 NC_007575.1 hypothetical protein 269754 3764647 Suden_0252 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392768.1 269104 R 326298 CDS YP_392769.1 78776454 3764648 269860..270081 1 NC_007575.1 sulfur carrier protein ThiS 270081 3764648 Suden_0253 Sulfurimonas denitrificans DSM 1251 sulfur carrier protein ThiS YP_392769.1 269860 D 326298 CDS YP_392770.1 78776455 3764649 270085..270522 1 NC_007575.1 molybdopterin converting factor subunit 2 270522 3764649 Suden_0254 Sulfurimonas denitrificans DSM 1251 molybdopterin converting factor subunit 2 YP_392770.1 270085 D 326298 CDS YP_392771.1 78776456 3764650 270519..271730 1 NC_007575.1 molybdopterin binding domain-containing protein 271730 3764650 Suden_0255 Sulfurimonas denitrificans DSM 1251 molybdopterin binding domain-containing protein YP_392771.1 270519 D 326298 CDS YP_392772.1 78776457 3764053 271797..272261 1 NC_007575.1 hypothetical protein 272261 3764053 Suden_0256 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392772.1 271797 D 326298 CDS YP_392773.1 78776458 3764054 272280..273374 1 NC_007575.1 hypothetical protein 273374 3764054 Suden_0257 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392773.1 272280 D 326298 CDS YP_392774.1 78776459 3764055 273371..274024 1 NC_007575.1 two component transcriptional regulator 274024 3764055 Suden_0258 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_392774.1 273371 D 326298 CDS YP_392775.1 78776460 3764056 274014..275183 1 NC_007575.1 histidine kinase 275183 3764056 Suden_0259 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392775.1 274014 D 326298 CDS YP_392776.1 78776461 3764057 275274..275798 1 NC_007575.1 monoheme cytochrome SoxX 275798 3764057 Suden_0260 Sulfurimonas denitrificans DSM 1251 monoheme cytochrome SoxX YP_392776.1 275274 D 326298 CDS YP_392777.1 78776462 3764058 275815..276282 1 NC_007575.1 thiosulfate-binding protein SoxY 276282 3764058 Suden_0261 Sulfurimonas denitrificans DSM 1251 thiosulfate-binding protein SoxY YP_392777.1 275815 D 326298 CDS YP_392778.1 78776463 3764059 276335..276670 1 NC_007575.1 sulfur compound chelating protein SoxZ 276670 3764059 Suden_0262 Sulfurimonas denitrificans DSM 1251 sulfur compound chelating protein SoxZ YP_392778.1 276335 D 326298 CDS YP_392779.1 78776464 3764060 276674..277444 1 NC_007575.1 sulfur oxidation; diheme cytochrome SoxA 277444 3764060 Suden_0263 Sulfurimonas denitrificans DSM 1251 diheme cytochrome SoxA YP_392779.1 276674 D 326298 CDS YP_392780.1 78776465 3764061 277455..279218 1 NC_007575.1 sulfate thiol esterase SoxB 279218 3764061 Suden_0264 Sulfurimonas denitrificans DSM 1251 sulfate thiol esterase SoxB YP_392780.1 277455 D 326298 CDS YP_392781.1 78776466 3764062 279249..280730 1 NC_007575.1 hypothetical protein 280730 3764062 Suden_0265 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392781.1 279249 D 326298 CDS YP_392782.1 78776467 3764063 280816..281193 1 NC_007575.1 hypothetical protein 281193 3764063 Suden_0266 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392782.1 280816 D 326298 CDS YP_392783.1 78776468 3764064 281195..281629 1 NC_007575.1 hypothetical protein 281629 3764064 Suden_0267 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392783.1 281195 D 326298 CDS YP_392784.1 78776469 3764065 281651..282556 1 NC_007575.1 hypothetical protein 282556 3764065 Suden_0268 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392784.1 281651 D 326298 CDS YP_392785.1 78776470 3764066 282619..284610 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 284610 3764066 Suden_0269 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_392785.1 282619 D 326298 CDS YP_392786.1 78776471 3764067 complement(284681..287800) 1 NC_007575.1 acriflavin resistance protein 287800 3764067 Suden_0270 Sulfurimonas denitrificans DSM 1251 acriflavin resistance protein YP_392786.1 284681 R 326298 CDS YP_392787.1 78776472 3764068 complement(287901..288602) 1 NC_007575.1 TonB-like protein 288602 3764068 Suden_0271 Sulfurimonas denitrificans DSM 1251 TonB-like protein YP_392787.1 287901 R 326298 CDS YP_392788.1 78776473 3764069 complement(288604..289410) 1 NC_007575.1 CoA enzyme activase 289410 3764069 Suden_0272 Sulfurimonas denitrificans DSM 1251 CoA enzyme activase YP_392788.1 288604 R 326298 CDS YP_392789.1 78776474 3764070 complement(289407..290675) 1 NC_007575.1 2-hydroxyglutaryl-CoA dehydratase subunit D 290675 3764070 Suden_0273 Sulfurimonas denitrificans DSM 1251 2-hydroxyglutaryl-CoA dehydratase subunit D YP_392789.1 289407 R 326298 CDS YP_392790.1 78776475 3764071 complement(290668..291648) 1 NC_007575.1 4Fe-4S ferredoxin 291648 3764071 Suden_0274 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_392790.1 290668 R 326298 CDS YP_392791.1 78776476 3764670 complement(291635..294391) 1 NC_007575.1 polyferredoxin-like 294391 3764670 Suden_0275 Sulfurimonas denitrificans DSM 1251 polyferredoxin-like YP_392791.1 291635 R 326298 CDS YP_392792.1 78776477 3764671 complement(294404..295000) 1 NC_007575.1 hypothetical protein 295000 3764671 Suden_0276 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392792.1 294404 R 326298 CDS YP_392793.1 78776478 3764672 complement(295078..295461) 1 NC_007575.1 biopolymer transport protein ExbD/TolR 295461 3764672 Suden_0277 Sulfurimonas denitrificans DSM 1251 biopolymer transport protein ExbD/TolR YP_392793.1 295078 R 326298 CDS YP_392794.1 78776479 3764673 complement(295442..295894) 1 NC_007575.1 MotA/TolQ/ExbB proton channel 295894 3764673 Suden_0278 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_392794.1 295442 R 326298 CDS YP_392795.1 78776480 3764674 complement(295915..298107) 1 NC_007575.1 TonB-dependent receptor 298107 3764674 Suden_0279 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_392795.1 295915 R 326298 CDS YP_392796.1 78776481 3764675 complement(298260..298826) 1 NC_007575.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 298826 rnhB 3764675 rnhB Sulfurimonas denitrificans DSM 1251 ribonuclease HII YP_392796.1 298260 R 326298 CDS YP_392797.1 78776482 3764676 complement(298816..300396) 1 NC_007575.1 multi-sensor signal transduction histidine kinase 300396 3764676 Suden_0281 Sulfurimonas denitrificans DSM 1251 multi-sensor signal transduction histidine kinase YP_392797.1 298816 R 326298 CDS YP_392798.1 78776483 3764677 complement(300396..300761) 1 NC_007575.1 response regulator receiver domain-containing protein 300761 3764677 Suden_0282 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_392798.1 300396 R 326298 CDS YP_392799.1 78776484 3764678 complement(300758..302086) 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 302086 3764678 Suden_0283 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_392799.1 300758 R 326298 CDS YP_392800.1 78776485 3764679 complement(302170..303234) 1 NC_007575.1 ATPase 303234 3764679 Suden_0284 Sulfurimonas denitrificans DSM 1251 ATPase YP_392800.1 302170 R 326298 CDS YP_392801.1 78776486 3764680 303390..303701 1 NC_007575.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 303701 rpsJ 3764680 rpsJ Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S10 YP_392801.1 303390 D 326298 CDS YP_392802.1 78776487 3764681 303711..304286 1 NC_007575.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 304286 rplC 3764681 rplC Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L3 YP_392802.1 303711 D 326298 CDS YP_392803.1 78776488 3764682 304286..304900 1 NC_007575.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 304900 rplD 3764682 rplD Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L4 YP_392803.1 304286 D 326298 CDS YP_392804.1 78776489 3764683 304901..305182 1 NC_007575.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 305182 rplW 3764683 rplW Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L23 YP_392804.1 304901 D 326298 CDS YP_392805.1 78776490 3764684 305184..306023 1 NC_007575.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 306023 rplB 3764684 rplB Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L2 YP_392805.1 305184 D 326298 CDS YP_392806.1 78776491 3764685 306028..306303 1 NC_007575.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 306303 rpsS 3764685 rpsS Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S19 YP_392806.1 306028 D 326298 CDS YP_392807.1 78776492 3764686 306306..306623 1 NC_007575.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 306623 rplV 3764686 rplV Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L22 YP_392807.1 306306 D 326298 CDS YP_392808.1 78776493 3764687 306625..307350 1 NC_007575.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 307350 rpsC 3764687 rpsC Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S3 YP_392808.1 306625 D 326298 CDS YP_392809.1 78776494 3764688 307353..307778 1 NC_007575.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 307778 rplP 3764688 rplP Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L16 YP_392809.1 307353 D 326298 CDS YP_392810.1 78776495 3764689 307765..307950 1 NC_007575.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 307950 3764689 Suden_0294 Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L29 YP_392810.1 307765 D 326298 CDS YP_392811.1 78776496 3763063 307960..308208 1 NC_007575.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 308208 rpsQ 3763063 rpsQ Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S17 YP_392811.1 307960 D 326298 CDS YP_392812.1 78776497 3763064 308208..308576 1 NC_007575.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 308576 rplN 3763064 rplN Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L14 YP_392812.1 308208 D 326298 CDS YP_392813.1 78776498 3763065 308576..308806 1 NC_007575.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 308806 rplX 3763065 rplX Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L24 YP_392813.1 308576 D 326298 CDS YP_392814.1 78776499 3763066 308809..309354 1 NC_007575.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 309354 rplE 3763066 rplE Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L5 YP_392814.1 308809 D 326298 CDS YP_392815.1 78776500 3763067 309354..309539 1 NC_007575.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 309539 rpsN 3763067 rpsN Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S14 YP_392815.1 309354 D 326298 CDS YP_392816.1 78776501 3763068 309645..310040 1 NC_007575.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 310040 rpsH 3763068 rpsH Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S8 YP_392816.1 309645 D 326298 CDS YP_392817.1 78776502 3763069 310050..310586 1 NC_007575.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 310586 rplF 3763069 rplF Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L6 YP_392817.1 310050 D 326298 CDS YP_392818.1 78776503 3763070 310600..310956 1 NC_007575.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 310956 rplR 3763070 rplR Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L18 YP_392818.1 310600 D 326298 CDS YP_392819.1 78776504 3763071 310965..311405 1 NC_007575.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 311405 rpsE 3763071 rpsE Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S5 YP_392819.1 310965 D 326298 CDS YP_392820.1 78776505 3763072 311409..311807 1 NC_007575.1 late assembly protein; 50S ribosomal protein L15 311807 rplO 3763072 rplO Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L15 YP_392820.1 311409 D 326298 CDS YP_392821.1 78776506 3763073 311810..313072 1 NC_007575.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 313072 secY 3763073 secY Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecY YP_392821.1 311810 D 326298 CDS YP_392822.1 78776507 3763074 313076..313834 1 NC_007575.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 313834 3763074 Suden_0306 Sulfurimonas denitrificans DSM 1251 methionine aminopeptidase YP_392822.1 313076 D 326298 CDS YP_392823.1 78776508 3763075 313851..314069 1 NC_007575.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 314069 infA 3763075 infA Sulfurimonas denitrificans DSM 1251 translation initiation factor IF-1 YP_392823.1 313851 D 326298 CDS YP_392824.1 78776509 3763076 complement(314103..314840) 1 NC_007575.1 rhodanese-like protein 314840 3763076 Suden_0308 Sulfurimonas denitrificans DSM 1251 rhodanese-like protein YP_392824.1 314103 R 326298 CDS YP_392825.1 78776510 3763077 complement(314848..315150) 1 NC_007575.1 chorismate mutase 315150 3763077 Suden_0309 Sulfurimonas denitrificans DSM 1251 chorismate mutase YP_392825.1 314848 R 326298 CDS YP_392826.1 78776511 3763078 complement(315204..315890) 1 NC_007575.1 phospholipid/glycerol acyltransferase 315890 3763078 Suden_0310 Sulfurimonas denitrificans DSM 1251 phospholipid/glycerol acyltransferase YP_392826.1 315204 R 326298 CDS YP_392827.1 78776512 3763079 complement(315900..316106) 1 NC_007575.1 hypothetical protein 316106 3763079 Suden_0311 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392827.1 315900 R 326298 CDS YP_392828.1 78776513 3763080 complement(316108..316956) 1 NC_007575.1 hypothetical protein 316956 3763080 Suden_0312 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392828.1 316108 R 326298 CDS YP_392829.1 78776514 3763081 complement(317024..318277) 1 NC_007575.1 arsenical pump membrane protein 318277 3763081 Suden_0313 Sulfurimonas denitrificans DSM 1251 arsenical pump membrane protein YP_392829.1 317024 R 326298 CDS YP_392830.1 78776515 3764705 complement(318277..318675) 1 NC_007575.1 arsenate reductase 318675 3764705 Suden_0314 Sulfurimonas denitrificans DSM 1251 arsenate reductase YP_392830.1 318277 R 326298 CDS YP_392831.1 78776516 3764706 complement(318668..318979) 1 NC_007575.1 ArsR family transcriptional regulator 318979 3764706 Suden_0315 Sulfurimonas denitrificans DSM 1251 ArsR family transcriptional regulator YP_392831.1 318668 R 326298 CDS YP_392832.1 78776517 3764707 complement(319119..320528) 1 NC_007575.1 histidine kinase 320528 3764707 Suden_0316 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392832.1 319119 R 326298 CDS YP_392833.1 78776518 3764708 complement(320521..321195) 1 NC_007575.1 two component transcriptional regulator 321195 3764708 Suden_0317 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_392833.1 320521 R 326298 CDS YP_392834.1 78776519 3764709 complement(321199..321558) 1 NC_007575.1 diacylglycerol kinase 321558 3764709 Suden_0318 Sulfurimonas denitrificans DSM 1251 diacylglycerol kinase YP_392834.1 321199 R 326298 CDS YP_392835.1 78776520 3764710 complement(321555..323495) 1 NC_007575.1 sulfatase 323495 3764710 Suden_0319 Sulfurimonas denitrificans DSM 1251 sulfatase YP_392835.1 321555 R 326298 CDS YP_392836.1 78776521 3764711 323665..325587 1 NC_007575.1 sulfatase 325587 3764711 Suden_0320 Sulfurimonas denitrificans DSM 1251 sulfatase YP_392836.1 323665 D 326298 CDS YP_392837.1 78776522 3764712 325577..326257 1 NC_007575.1 PAP2 superfamily protein 326257 3764712 Suden_0321 Sulfurimonas denitrificans DSM 1251 PAP2 superfamily protein YP_392837.1 325577 D 326298 CDS YP_392838.1 78776523 3764713 326313..326657 1 NC_007575.1 hypothetical protein 326657 3764713 Suden_0322 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392838.1 326313 D 326298 CDS YP_392839.1 78776524 3764714 326933..327046 1 NC_007575.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 327046 rpmJ 3764714 rpmJ Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L36 YP_392839.1 326933 D 326298 CDS YP_392840.1 78776525 3764715 327049..327411 1 NC_007575.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 327411 rpsM 3764715 rpsM Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S13 YP_392840.1 327049 D 326298 CDS YP_392841.1 78776526 3764716 327422..327814 1 NC_007575.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 327814 3764716 Suden_0325 Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S11 YP_392841.1 327422 D 326298 CDS YP_392842.1 78776527 3764717 327826..328452 1 NC_007575.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 328452 rpsD 3764717 rpsD Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S4 YP_392842.1 327826 D 326298 CDS YP_392843.1 78776528 3764718 328481..329473 1 NC_007575.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 329473 3764718 Suden_0327 Sulfurimonas denitrificans DSM 1251 DNA-directed RNA polymerase subunit alpha YP_392843.1 328481 D 326298 CDS YP_392844.1 78776529 3764719 329494..329844 1 NC_007575.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 329844 rplQ 3764719 rplQ Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L17 YP_392844.1 329494 D 326298 CDS YP_392845.1 78776530 3764720 329976..331208 1 NC_007575.1 s (related to aryl-alcohol dehydrogenases)-like; oxidoreductase like protein 331208 3764720 Suden_0329 Sulfurimonas denitrificans DSM 1251 oxidoreductase like protein YP_392845.1 329976 D 326298 CDS YP_392846.1 78776531 3764721 331292..331567 1 NC_007575.1 nitrogen-fixing NifU-like protein 331567 3764721 Suden_0330 Sulfurimonas denitrificans DSM 1251 nitrogen-fixing NifU-like protein YP_392846.1 331292 D 326298 CDS YP_392847.1 78776532 3764722 331584..332174 1 NC_007575.1 hypothetical protein 332174 3764722 Suden_0331 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392847.1 331584 D 326298 CDS YP_392848.1 78776533 3764723 332164..333465 1 NC_007575.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 333465 murE 3764723 murE Sulfurimonas denitrificans DSM 1251 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_392848.1 332164 D 326298 CDS YP_392849.1 78776534 3764724 333557..333931 1 NC_007575.1 (2Fe-2S) ferredoxin 333931 3764724 Suden_0333 Sulfurimonas denitrificans DSM 1251 (2Fe-2S) ferredoxin YP_392849.1 333557 D 326298 CDS YP_392850.1 78776535 3764690 333933..334298 1 NC_007575.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 334298 3764690 Suden_0334 Sulfurimonas denitrificans DSM 1251 aspartate alpha-decarboxylase YP_392850.1 333933 D 326298 CDS YP_392851.1 78776536 3764691 334303..334611 1 NC_007575.1 hypothetical protein 334611 3764691 Suden_0335 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392851.1 334303 D 326298 CDS YP_392852.1 78776537 3764692 334613..335593 1 NC_007575.1 hypothetical protein 335593 3764692 Suden_0336 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392852.1 334613 D 326298 CDS YP_392853.1 78776538 3764693 335606..336454 1 NC_007575.1 polyprenyl synthetase 336454 3764693 Suden_0337 Sulfurimonas denitrificans DSM 1251 polyprenyl synthetase YP_392853.1 335606 D 326298 CDS YP_392854.1 78776539 3764694 336472..338391 1 NC_007575.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 338391 3764694 Suden_0338 Sulfurimonas denitrificans DSM 1251 transketolase YP_392854.1 336472 D 326298 CDS YP_392855.1 78776540 3764695 338582..338833 1 NC_007575.1 hypothetical protein 338833 3764695 Suden_0339 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392855.1 338582 D 326298 CDS YP_392856.1 78776541 3764696 complement(338886..339560) 1 NC_007575.1 DNA-3-methyladenine glycosylase III 339560 3764696 Suden_0340 Sulfurimonas denitrificans DSM 1251 DNA-3-methyladenine glycosylase III YP_392856.1 338886 R 326298 CDS YP_392857.1 78776542 3764697 complement(339557..340465) 1 NC_007575.1 auxin efflux carrier 340465 3764697 Suden_0341 Sulfurimonas denitrificans DSM 1251 auxin efflux carrier YP_392857.1 339557 R 326298 CDS YP_392858.1 78776543 3764698 340518..340838 1 NC_007575.1 thioredoxin-like protein 340838 3764698 Suden_0342 Sulfurimonas denitrificans DSM 1251 thioredoxin-like protein YP_392858.1 340518 D 326298 CDS YP_392859.1 78776544 3764699 complement(340842..341591) 1 NC_007575.1 tRNA/rRNA methyltransferase SpoU 341591 3764699 Suden_0343 Sulfurimonas denitrificans DSM 1251 tRNA/rRNA methyltransferase SpoU YP_392859.1 340842 R 326298 CDS YP_392860.1 78776545 3764700 complement(341641..342366) 1 NC_007575.1 hypothetical protein 342366 3764700 Suden_0344 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392860.1 341641 R 326298 CDS YP_392861.1 78776546 3764725 343130..344329 1 NC_007575.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 344329 3764725 Suden_0345 Sulfurimonas denitrificans DSM 1251 elongation factor Tu YP_392861.1 343130 D 326298 CDS YP_392862.1 78776547 3764726 344373..344525 1 NC_007575.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 344525 rpmG 3764726 rpmG Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L33 YP_392862.1 344373 D 326298 CDS YP_392863.1 78776548 3764728 344721..344900 1 NC_007575.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 344900 secE 3764728 secE Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecE YP_392863.1 344721 D 326298 CDS YP_392864.1 78776549 3764729 344910..345449 1 NC_007575.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 345449 nusG 3764729 nusG Sulfurimonas denitrificans DSM 1251 transcription antitermination protein NusG YP_392864.1 344910 D 326298 CDS YP_392865.1 78776550 3764730 345614..346039 1 NC_007575.1 50S ribosomal protein L11 346039 3764730 Suden_0349 Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L11 YP_392865.1 345614 D 326298 CDS YP_392866.1 78776551 3764731 346110..346802 1 NC_007575.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 346802 rplA 3764731 rplA Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L1 YP_392866.1 346110 D 326298 CDS YP_392867.1 78776552 3764732 346955..347434 1 NC_007575.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 347434 rplJ 3764732 rplJ Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L10 YP_392867.1 346955 D 326298 CDS YP_392868.1 78776553 3764733 347494..347862 1 NC_007575.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 347862 rplL 3764733 rplL Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L7/L12 YP_392868.1 347494 D 326298 CDS YP_392869.1 78776554 3764734 348090..352235 1 NC_007575.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 352235 rpoB 3764734 rpoB Sulfurimonas denitrificans DSM 1251 DNA-directed RNA polymerase subunit beta YP_392869.1 348090 D 326298 CDS YP_392870.1 78776555 3764735 352228..356739 1 NC_007575.1 DNA-directed RNA polymerase, subunit beta-prime 356739 3764735 Suden_0354 Sulfurimonas denitrificans DSM 1251 DNA-directed RNA polymerase, subunit beta-prime YP_392870.1 352228 D 326298 CDS YP_392871.1 78776556 3764736 356938..357318 1 NC_007575.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 357318 rpsL 3764736 rpsL Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S12 YP_392871.1 356938 D 326298 CDS YP_392872.1 78776557 3764737 357420..357887 1 NC_007575.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 357887 3764737 Suden_0356 Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S7 YP_392872.1 357420 D 326298 CDS YP_392873.1 78776558 3764738 357900..359990 1 NC_007575.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 359990 3764738 Suden_0357 Sulfurimonas denitrificans DSM 1251 elongation factor G YP_392873.1 357900 D 326298 CDS YP_392874.1 78776559 3764739 complement(360339..361052) 1 NC_007575.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 361052 3764739 Suden_0358 Sulfurimonas denitrificans DSM 1251 arginyl-tRNA-protein transferase YP_392874.1 360339 R 326298 CDS YP_392875.1 78776560 3764740 361094..361438 1 NC_007575.1 hypothetical protein 361438 3764740 Suden_0359 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392875.1 361094 D 326298 CDS YP_392876.1 78776561 3764741 complement(361416..362513) 1 NC_007575.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 362513 prfB 3764741 prfB Sulfurimonas denitrificans DSM 1251 peptide chain release factor 2 YP_392876.1 361416 R 326298 CDS YP_392877.1 78776562 3764742 362567..363388 1 NC_007575.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 363388 panC 3764742 panC Sulfurimonas denitrificans DSM 1251 pantoate--beta-alanine ligase YP_392877.1 362567 D 326298 CDS YP_392878.1 78776563 3763005 complement(363335..365122) 1 NC_007575.1 peptidoglycan glycosyltransferase 365122 3763005 Suden_0362 Sulfurimonas denitrificans DSM 1251 peptidoglycan glycosyltransferase YP_392878.1 363335 R 326298 CDS YP_392879.1 78776564 3763006 complement(365154..365453) 1 NC_007575.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 365453 fliE 3763006 fliE Sulfurimonas denitrificans DSM 1251 flagellar hook-basal body protein FliE YP_392879.1 365154 R 326298 CDS YP_392880.1 78776565 3763007 complement(365469..365963) 1 NC_007575.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 365963 flgC 3763007 flgC Sulfurimonas denitrificans DSM 1251 flagellar basal body rod protein FlgC YP_392880.1 365469 R 326298 CDS YP_392881.1 78776566 3763008 complement(365974..366405) 1 NC_007575.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 366405 flgB 3763008 flgB Sulfurimonas denitrificans DSM 1251 flagellar basal-body rod protein FlgB YP_392881.1 365974 R 326298 CDS YP_392882.1 78776567 3763009 366558..366956 1 NC_007575.1 N-terminal methylation 366956 3763009 Suden_0366 Sulfurimonas denitrificans DSM 1251 N-terminal methylation YP_392882.1 366558 D 326298 CDS YP_392883.1 78776568 3763010 367064..367501 1 NC_007575.1 N-terminal methylation 367501 3763010 Suden_0367 Sulfurimonas denitrificans DSM 1251 N-terminal methylation YP_392883.1 367064 D 326298 CDS YP_392884.1 78776569 3763011 367533..369377 1 NC_007575.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 369377 3763011 Suden_0368 Sulfurimonas denitrificans DSM 1251 primosome assembly protein PriA YP_392884.1 367533 D 326298 CDS YP_392885.1 78776570 3763012 complement(369361..369930) 1 NC_007575.1 nucleoside diphosphate pyrophosphatase 369930 3763012 Suden_0369 Sulfurimonas denitrificans DSM 1251 nucleoside diphosphate pyrophosphatase YP_392885.1 369361 R 326298 CDS YP_392886.1 78776571 3763013 complement(369899..371107) 1 NC_007575.1 peptidase M23B 371107 3763013 Suden_0370 Sulfurimonas denitrificans DSM 1251 peptidase M23B YP_392886.1 369899 R 326298 CDS YP_392887.1 78776572 3763014 371221..372027 1 NC_007575.1 hypothetical protein 372027 3763014 Suden_0371 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392887.1 371221 D 326298 CDS YP_392888.1 78776573 3763015 372031..373416 1 NC_007575.1 FAD linked oxidase-like protein 373416 3763015 Suden_0372 Sulfurimonas denitrificans DSM 1251 FAD linked oxidase-like protein YP_392888.1 372031 D 326298 CDS YP_392889.1 78776574 3763016 373423..374256 1 NC_007575.1 ribonuclease BN 374256 3763016 Suden_0373 Sulfurimonas denitrificans DSM 1251 ribonuclease BN YP_392889.1 373423 D 326298 CDS YP_392890.1 78776575 3763017 complement(374203..375465) 1 NC_007575.1 ComEC/Rec2-like protein 375465 3763017 Suden_0374 Sulfurimonas denitrificans DSM 1251 ComEC/Rec2-like protein YP_392890.1 374203 R 326298 CDS YP_392891.1 78776576 3763018 complement(375468..376919) 1 NC_007575.1 unwinds double stranded DNA; replicative DNA helicase 376919 3763018 Suden_0375 Sulfurimonas denitrificans DSM 1251 replicative DNA helicase YP_392891.1 375468 R 326298 CDS YP_392892.1 78776577 3763019 complement(376919..377977) 1 NC_007575.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 377977 ispG 3763019 ispG Sulfurimonas denitrificans DSM 1251 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_392892.1 376919 R 326298 CDS YP_392893.1 78776578 3763020 complement(378139..380124) 1 NC_007575.1 TonB-dependent receptor 380124 3763020 Suden_0377 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_392893.1 378139 R 326298 CDS YP_392894.1 78776579 3763021 complement(380345..381340) 1 NC_007575.1 peptidyl-arginine deiminase 381340 3763021 Suden_0378 Sulfurimonas denitrificans DSM 1251 peptidyl-arginine deiminase YP_392894.1 380345 R 326298 CDS YP_392895.1 78776580 3763022 381357..382373 1 NC_007575.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 382373 alr 3763022 alr Sulfurimonas denitrificans DSM 1251 alanine racemase YP_392895.1 381357 D 326298 CDS YP_392896.1 78776581 3763023 complement(382370..384340) 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 384340 3763023 Suden_0380 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_392896.1 382370 R 326298 CDS YP_392897.1 78776582 3763024 complement(384420..384812) 1 NC_007575.1 hypothetical protein 384812 3763024 Suden_0381 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392897.1 384420 R 326298 CDS YP_392898.1 78776583 3764111 complement(384809..385033) 1 NC_007575.1 hypothetical protein 385033 3764111 Suden_0382 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392898.1 384809 R 326298 CDS YP_392899.1 78776584 3764112 complement(385030..385611) 1 NC_007575.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 385611 gidB 3764112 gidB Sulfurimonas denitrificans DSM 1251 16S rRNA methyltransferase GidB YP_392899.1 385030 R 326298 CDS YP_392900.1 78776585 3764113 complement(385645..386208) 1 NC_007575.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 386208 ribA 3764113 ribA Sulfurimonas denitrificans DSM 1251 GTP cyclohydrolase II YP_392900.1 385645 R 326298 CDS YP_392901.1 78776586 3764114 386282..387253 1 NC_007575.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 387253 3764114 Suden_0385 Sulfurimonas denitrificans DSM 1251 delta-aminolevulinic acid dehydratase YP_392901.1 386282 D 326298 CDS YP_392902.1 78776587 3764115 387342..388280 1 NC_007575.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 388280 3764115 Suden_0386 Sulfurimonas denitrificans DSM 1251 ornithine carbamoyltransferase YP_392902.1 387342 D 326298 CDS YP_392903.1 78776588 3764116 complement(388310..388564) 1 NC_007575.1 hypothetical protein 388564 3764116 Suden_0387 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392903.1 388310 R 326298 CDS YP_392904.1 78776589 3764117 complement(389163..389792) 1 NC_007575.1 hypothetical protein 389792 3764117 Suden_0388 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392904.1 389163 R 326298 CDS YP_392905.1 78776590 3764118 complement(389848..390807) 1 NC_007575.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 390807 3764118 Suden_0389 Sulfurimonas denitrificans DSM 1251 tryptophanyl-tRNA synthetase YP_392905.1 389848 R 326298 CDS YP_392906.1 78776591 3764119 390950..391279 1 NC_007575.1 sigma 54 modulation protein/ribosomal protein S30EA 391279 3764119 Suden_0390 Sulfurimonas denitrificans DSM 1251 sigma 54 modulation protein/ribosomal protein S30EA YP_392906.1 390950 D 326298 CDS YP_392907.1 78776592 3764120 391281..391703 1 NC_007575.1 hypothetical protein 391703 3764120 Suden_0391 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392907.1 391281 D 326298 CDS YP_392908.1 78776593 3764121 complement(391778..393262) 1 NC_007575.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 393262 engA 3764121 engA Sulfurimonas denitrificans DSM 1251 GTP-binding protein EngA YP_392908.1 391778 R 326298 CDS YP_392909.1 78776594 3764122 complement(393323..394012) 1 NC_007575.1 hypothetical protein 394012 3764122 Suden_0393 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392909.1 393323 R 326298 CDS YP_392910.1 78776595 3764123 complement(394009..394587) 1 NC_007575.1 hypothetical protein 394587 3764123 Suden_0394 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392910.1 394009 R 326298 CDS YP_392911.1 78776596 3764124 394727..395185 1 NC_007575.1 phosphoribosyltransferase 395185 3764124 Suden_0395 Sulfurimonas denitrificans DSM 1251 phosphoribosyltransferase YP_392911.1 394727 D 326298 CDS YP_392912.1 78776597 3764125 complement(395175..395483) 1 NC_007575.1 cytochrome C 395483 3764125 Suden_0396 Sulfurimonas denitrificans DSM 1251 cytochrome C YP_392912.1 395175 R 326298 CDS YP_392913.1 78776598 3764126 complement(395541..396293) 1 NC_007575.1 molecular chaperone DnaJ 396293 3764126 Suden_0397 Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaJ YP_392913.1 395541 R 326298 CDS YP_392914.1 78776599 3764127 complement(396369..397160) 1 NC_007575.1 hypothetical protein 397160 3764127 Suden_0398 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392914.1 396369 R 326298 CDS YP_392915.1 78776600 3764128 complement(397177..398163) 1 NC_007575.1 hypothetical protein 398163 3764128 Suden_0399 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392915.1 397177 R 326298 CDS YP_392916.1 78776601 3764129 398227..399114 1 NC_007575.1 hypothetical protein 399114 3764129 Suden_0400 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392916.1 398227 D 326298 CDS YP_392917.1 78776602 3762716 399171..399962 1 NC_007575.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 399962 3762716 Suden_0401 Sulfurimonas denitrificans DSM 1251 2-dehydro-3-deoxyphosphooctonate aldolase YP_392917.1 399171 D 326298 CDS YP_392918.1 78776603 3762717 399966..400430 1 NC_007575.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 400430 ribH 3762717 ribH Sulfurimonas denitrificans DSM 1251 6,7-dimethyl-8-ribityllumazine synthase YP_392918.1 399966 D 326298 CDS YP_392919.1 78776604 3762718 400433..400831 1 NC_007575.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 400831 nusB 3762718 nusB Sulfurimonas denitrificans DSM 1251 transcription antitermination protein NusB YP_392919.1 400433 D 326298 CDS YP_392920.1 78776605 3762719 400834..401883 1 NC_007575.1 hypothetical protein 401883 3762719 Suden_0404 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392920.1 400834 D 326298 CDS YP_392921.1 78776606 3762720 401884..403167 1 NC_007575.1 peptidase M16-like protein 403167 3762720 Suden_0405 Sulfurimonas denitrificans DSM 1251 peptidase M16-like protein YP_392921.1 401884 D 326298 CDS YP_392922.1 78776607 3762721 403259..405073 1 NC_007575.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 405073 3762721 Suden_0406 Sulfurimonas denitrificans DSM 1251 ATP-dependent DNA helicase RecG YP_392922.1 403259 D 326298 CDS YP_392923.1 78776608 3762722 complement(405128..405670) 1 NC_007575.1 sigma 54 modulation protein/ribosomal protein S30EA 405670 3762722 Suden_0407 Sulfurimonas denitrificans DSM 1251 sigma 54 modulation protein/ribosomal protein S30EA YP_392923.1 405128 R 326298 CDS YP_392924.1 78776609 3762723 complement(405736..406155) 1 NC_007575.1 hypothetical protein 406155 3762723 Suden_0408 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392924.1 405736 R 326298 CDS YP_392925.1 78776610 3762724 complement(406182..407084) 1 NC_007575.1 hypothetical protein 407084 3762724 Suden_0409 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392925.1 406182 R 326298 CDS YP_392926.1 78776611 3762725 complement(407084..407710) 1 NC_007575.1 hypothetical protein 407710 3762725 Suden_0410 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392926.1 407084 R 326298 CDS YP_392927.1 78776612 3762726 complement(407704..409677) 1 NC_007575.1 hypothetical protein 409677 3762726 Suden_0411 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392927.1 407704 R 326298 CDS YP_392928.1 78776613 3762727 complement(409777..410157) 1 NC_007575.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 410157 3762727 Suden_0412 Sulfurimonas denitrificans DSM 1251 flagellar assembly protein FliW YP_392928.1 409777 R 326298 CDS YP_392929.1 78776614 3762728 410278..411138 1 NC_007575.1 DNA uptake lipoprotein-like protein 411138 3762728 Suden_0413 Sulfurimonas denitrificans DSM 1251 DNA uptake lipoprotein-like protein YP_392929.1 410278 D 326298 CDS YP_392930.1 78776615 3762729 411128..413539 1 NC_007575.1 peptidase S16, ATP-dependent protease La 413539 3762729 Suden_0414 Sulfurimonas denitrificans DSM 1251 peptidase S16, ATP-dependent protease La YP_392930.1 411128 D 326298 CDS YP_392931.1 78776616 3762730 complement(413536..413910) 1 NC_007575.1 response regulator receiver domain-containing protein 413910 3762730 Suden_0415 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_392931.1 413536 R 326298 CDS YP_392932.1 78776617 3762731 complement(414019..416709) 1 NC_007575.1 histidine kinase 416709 3762731 Suden_0416 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392932.1 414019 R 326298 CDS YP_392933.1 78776618 3762732 complement(416781..417164) 1 NC_007575.1 PAS/PAC sensor protein 417164 3762732 Suden_0417 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_392933.1 416781 R 326298 CDS YP_392934.1 78776619 3762733 complement(417232..419034) 1 NC_007575.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 419034 uvrC 3762733 uvrC Sulfurimonas denitrificans DSM 1251 excinuclease ABC subunit C YP_392934.1 417232 R 326298 CDS YP_392935.1 78776620 3762734 complement(419024..419482) 1 NC_007575.1 hypothetical protein 419482 3762734 Suden_0419 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392935.1 419024 R 326298 CDS YP_392936.1 78776621 3762735 419638..421089 1 NC_007575.1 L-aspartate oxidase 421089 3762735 Suden_0420 Sulfurimonas denitrificans DSM 1251 L-aspartate oxidase YP_392936.1 419638 D 326298 CDS YP_392937.1 78776622 3764554 421082..422455 1 NC_007575.1 transporter 422455 3764554 Suden_0421 Sulfurimonas denitrificans DSM 1251 transporter YP_392937.1 421082 D 326298 CDS YP_392938.1 78776623 3764555 422554..424104 1 NC_007575.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 424104 guaA 3764555 guaA Sulfurimonas denitrificans DSM 1251 GMP synthase YP_392938.1 422554 D 326298 CDS YP_392939.1 78776624 3764556 424115..424753 1 NC_007575.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 424753 hemD 3764556 hemD Sulfurimonas denitrificans DSM 1251 uroporphyrinogen-III synthase YP_392939.1 424115 D 326298 CDS YP_392940.1 78776625 3764557 425069..426349 1 NC_007575.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 426349 3764557 Suden_0424 Sulfurimonas denitrificans DSM 1251 phosphoribosylamine--glycine ligase YP_392940.1 425069 D 326298 CDS YP_392941.1 78776626 3764558 426346..426795 1 NC_007575.1 RDD protein 426795 3764558 Suden_0425 Sulfurimonas denitrificans DSM 1251 RDD protein YP_392941.1 426346 D 326298 CDS YP_392942.1 78776627 3764559 426788..429004 1 NC_007575.1 organic solvent tolerance protein 429004 3764559 Suden_0426 Sulfurimonas denitrificans DSM 1251 organic solvent tolerance protein YP_392942.1 426788 D 326298 CDS YP_392943.1 78776628 3764560 429008..429670 1 NC_007575.1 hypothetical protein 429670 3764560 Suden_0427 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392943.1 429008 D 326298 CDS YP_392944.1 78776629 3764561 429660..431825 1 NC_007575.1 polynucleotide phosphorylase 431825 3764561 Suden_0428 Sulfurimonas denitrificans DSM 1251 polynucleotide phosphorylase YP_392944.1 429660 D 326298 CDS YP_392945.1 78776630 3764562 431999..432313 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 432313 3764562 Suden_0429 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit C YP_392945.1 431999 D 326298 CDS YP_392946.1 78776631 3764564 432652..433752 1 NC_007575.1 hypothetical protein 433752 3764564 Suden_0430 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392946.1 432652 D 326298 CDS YP_392947.1 78776632 3764565 complement(433865..435349) 1 NC_007575.1 sulfate transporter 435349 3764565 Suden_0431 Sulfurimonas denitrificans DSM 1251 sulfate transporter YP_392947.1 433865 R 326298 CDS YP_392948.1 78776633 3764566 complement(435360..435713) 1 NC_007575.1 cupin 435713 3764566 Suden_0432 Sulfurimonas denitrificans DSM 1251 cupin YP_392948.1 435360 R 326298 CDS YP_392949.1 78776634 3764567 435773..436696 1 NC_007575.1 cysteine synthase 436696 3764567 Suden_0433 Sulfurimonas denitrificans DSM 1251 cysteine synthase YP_392949.1 435773 D 326298 CDS YP_392950.1 78776635 3764568 436689..437288 1 NC_007575.1 hypothetical protein 437288 3764568 Suden_0434 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392950.1 436689 D 326298 CDS YP_392951.1 78776636 3764569 437282..437740 1 NC_007575.1 hypothetical protein 437740 3764569 Suden_0435 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392951.1 437282 D 326298 CDS YP_392952.1 78776637 3764570 complement(437744..438646) 1 NC_007575.1 LysR family transcriptional regulator 438646 3764570 Suden_0436 Sulfurimonas denitrificans DSM 1251 LysR family transcriptional regulator YP_392952.1 437744 R 326298 CDS YP_392953.1 78776638 3764571 438775..440823 1 NC_007575.1 UvrD/REP helicase 440823 3764571 Suden_0437 Sulfurimonas denitrificans DSM 1251 UvrD/REP helicase YP_392953.1 438775 D 326298 CDS YP_392954.1 78776639 3764651 440820..441641 1 NC_007575.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 441641 truB 3764651 truB Sulfurimonas denitrificans DSM 1251 tRNA pseudouridine synthase B YP_392954.1 440820 D 326298 CDS YP_392955.1 78776640 3764652 441635..441865 1 NC_007575.1 carbon storage regulator CsrA 441865 3764652 Suden_0439 Sulfurimonas denitrificans DSM 1251 carbon storage regulator CsrA YP_392955.1 441635 D 326298 CDS YP_392956.1 78776641 3764653 441872..442672 1 NC_007575.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 442672 3764653 Suden_0440 Sulfurimonas denitrificans DSM 1251 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_392956.1 441872 D 326298 CDS YP_392957.1 78776642 3764654 442672..443124 1 NC_007575.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 443124 smpB 3764654 smpB Sulfurimonas denitrificans DSM 1251 SsrA-binding protein YP_392957.1 442672 D 326298 CDS YP_392958.1 78776643 3764655 443124..443981 1 NC_007575.1 peptidase M23B 443981 3764655 Suden_0442 Sulfurimonas denitrificans DSM 1251 peptidase M23B YP_392958.1 443124 D 326298 CDS YP_392959.1 78776644 3764656 443994..444575 1 NC_007575.1 hypothetical protein 444575 3764656 Suden_0443 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392959.1 443994 D 326298 CDS YP_392960.1 78776645 3764657 444572..445294 1 NC_007575.1 hypothetical protein 445294 3764657 Suden_0444 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392960.1 444572 D 326298 CDS YP_392961.1 78776646 3764658 445332..446045 1 NC_007575.1 hypothetical protein 446045 3764658 Suden_0445 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392961.1 445332 D 326298 CDS YP_392962.1 78776647 3764659 446087..447214 1 NC_007575.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 447214 3764659 Suden_0446 Sulfurimonas denitrificans DSM 1251 3-deoxy-D-manno-octulosonic-acid transferase YP_392962.1 446087 D 326298 CDS YP_392963.1 78776648 3764660 447226..447960 1 NC_007575.1 pseudouridine synthase 447960 3764660 Suden_0447 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_392963.1 447226 D 326298 CDS YP_392964.1 78776649 3764661 447986..448225 1 NC_007575.1 excinuclease ABC subunit C 448225 3764661 Suden_0448 Sulfurimonas denitrificans DSM 1251 excinuclease ABC subunit C YP_392964.1 447986 D 326298 CDS YP_392965.1 78776650 3764662 448210..448665 1 NC_007575.1 hypothetical protein 448665 3764662 Suden_0449 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392965.1 448210 D 326298 CDS YP_392966.1 78776651 3764663 448746..450089 1 NC_007575.1 Signal recognition particle protein 450089 3764663 Suden_0450 Sulfurimonas denitrificans DSM 1251 Signal recognition particle protein YP_392966.1 448746 D 326298 CDS YP_392967.1 78776652 3764664 450211..450441 1 NC_007575.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 450441 rpsP 3764664 rpsP Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S16 YP_392967.1 450211 D 326298 CDS YP_392968.1 78776653 3764665 450444..450683 1 NC_007575.1 hypothetical protein 450683 3764665 Suden_0452 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392968.1 450444 D 326298 CDS YP_392969.1 78776654 3764666 450664..451203 1 NC_007575.1 16S rRNA-processing protein RimM 451203 3764666 Suden_0453 Sulfurimonas denitrificans DSM 1251 16S rRNA-processing protein RimM YP_392969.1 450664 D 326298 CDS YP_392970.1 78776655 3764667 451203..451898 1 NC_007575.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 451898 trmD 3764667 trmD Sulfurimonas denitrificans DSM 1251 tRNA (guanine-N(1)-)-methyltransferase YP_392970.1 451203 D 326298 CDS YP_392971.1 78776656 3764668 452021..452380 1 NC_007575.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 452380 rplS 3764668 rplS Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L19 YP_392971.1 452021 D 326298 CDS YP_392972.1 78776657 3764486 complement(458483..459169) 1 NC_007575.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 459169 aat 3764486 aat Sulfurimonas denitrificans DSM 1251 leucyl/phenylalanyl-tRNA--protein transferase YP_392972.1 458483 R 326298 CDS YP_392973.1 78776658 3764487 complement(459166..461343) 1 NC_007575.1 ATPase AAA 461343 3764487 Suden_0457 Sulfurimonas denitrificans DSM 1251 ATPase AAA YP_392973.1 459166 R 326298 CDS YP_392974.1 78776659 3764488 complement(461343..461642) 1 NC_007575.1 ATP-dependent Clp protease adaptor protein ClpS 461642 3764488 Suden_0458 Sulfurimonas denitrificans DSM 1251 ATP-dependent Clp protease adaptor protein ClpS YP_392974.1 461343 R 326298 CDS YP_392975.1 78776660 3764489 complement(461871..463106) 1 NC_007575.1 O-acetylhomoserine aminocarboxypropyltransferase 463106 3764489 Suden_0459 Sulfurimonas denitrificans DSM 1251 O-acetylhomoserine aminocarboxypropyltransferase YP_392975.1 461871 R 326298 CDS YP_392976.1 78776661 3764490 463202..463864 1 NC_007575.1 dethiobiotin synthase 463864 3764490 Suden_0460 Sulfurimonas denitrificans DSM 1251 dethiobiotin synthase YP_392976.1 463202 D 326298 CDS YP_392977.1 78776662 3764491 463972..464847 1 NC_007575.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 464847 pyrB 3764491 pyrB Sulfurimonas denitrificans DSM 1251 aspartate carbamoyltransferase YP_392977.1 463972 D 326298 CDS YP_392978.1 78776663 3764492 464837..465775 1 NC_007575.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I 465775 3764492 Suden_0462 Sulfurimonas denitrificans DSM 1251 para-aminobenzoate synthase component I YP_392978.1 464837 D 326298 CDS YP_392979.1 78776664 3764493 465791..467188 1 NC_007575.1 histidine kinase 467188 3764493 Suden_0463 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_392979.1 465791 D 326298 CDS YP_392980.1 78776665 3764494 467241..468221 1 NC_007575.1 Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 468221 3764494 Suden_0464 Sulfurimonas denitrificans DSM 1251 transaldolase YP_392980.1 467241 D 326298 CDS YP_392981.1 78776666 3764495 468354..468890 1 NC_007575.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 468890 3764495 Suden_0465 Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L25 YP_392981.1 468354 D 326298 CDS YP_392982.1 78776667 3764496 468894..469448 1 NC_007575.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 469448 3764496 Suden_0466 Sulfurimonas denitrificans DSM 1251 peptidyl-tRNA hydrolase YP_392982.1 468894 D 326298 CDS YP_392983.1 78776668 3764497 469479..470558 1 NC_007575.1 permease YjgP/YjgQ 470558 3764497 Suden_0467 Sulfurimonas denitrificans DSM 1251 permease YjgP/YjgQ YP_392983.1 469479 D 326298 CDS YP_392984.1 78776669 3764498 470650..471861 1 NC_007575.1 diaminopimelate decarboxylase 471861 3764498 Suden_0468 Sulfurimonas denitrificans DSM 1251 diaminopimelate decarboxylase YP_392984.1 470650 D 326298 CDS YP_392985.1 78776670 3764499 471863..472639 1 NC_007575.1 HAD family hydrolase 472639 3764499 Suden_0469 Sulfurimonas denitrificans DSM 1251 HAD family hydrolase YP_392985.1 471863 D 326298 CDS YP_392986.1 78776671 3764592 472636..473727 1 NC_007575.1 chorismate mutase 473727 3764592 Suden_0470 Sulfurimonas denitrificans DSM 1251 chorismate mutase YP_392986.1 472636 D 326298 CDS YP_392987.1 78776672 3764593 473717..474811 1 NC_007575.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 474811 3764593 Suden_0471 Sulfurimonas denitrificans DSM 1251 histidinol-phosphate aminotransferase YP_392987.1 473717 D 326298 CDS YP_392988.1 78776673 3764594 474830..476530 1 NC_007575.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 476530 fliF 3764594 fliF Sulfurimonas denitrificans DSM 1251 flagellar MS-ring protein YP_392988.1 474830 D 326298 CDS YP_392989.1 78776674 3764595 476549..477577 1 NC_007575.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 477577 fliG 3764595 fliG Sulfurimonas denitrificans DSM 1251 flagellar motor switch protein G YP_392989.1 476549 D 326298 CDS YP_392990.1 78776675 3764596 477579..478373 1 NC_007575.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 478373 fliH 3764596 fliH Sulfurimonas denitrificans DSM 1251 flagellar assembly protein H YP_392990.1 477579 D 326298 CDS YP_392991.1 78776676 3764597 478383..480203 1 NC_007575.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 480203 3764597 Suden_0475 Sulfurimonas denitrificans DSM 1251 1-deoxy-D-xylulose-5-phosphate synthase YP_392991.1 478383 D 326298 CDS YP_392992.1 78776677 3764598 complement(480195..480917) 1 NC_007575.1 hypothetical protein 480917 3764598 Suden_0476 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392992.1 480195 R 326298 CDS YP_392993.1 78776678 3764599 480946..483051 1 NC_007575.1 hypothetical protein 483051 3764599 Suden_0477 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392993.1 480946 D 326298 CDS YP_392994.1 78776679 3764600 483139..485865 1 NC_007575.1 hypothetical protein 485865 3764600 Suden_0478 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392994.1 483139 D 326298 CDS YP_392995.1 78776680 3764602 486513..487328 1 NC_007575.1 hypothetical protein 487328 3764602 Suden_0480 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392995.1 486513 D 326298 CDS YP_392996.1 78776681 3764603 487420..488604 1 NC_007575.1 class I and II aminotransferase 488604 3764603 Suden_0481 Sulfurimonas denitrificans DSM 1251 class I and II aminotransferase YP_392996.1 487420 D 326298 CDS YP_392997.1 78776682 3764604 488647..488883 1 NC_007575.1 hypothetical protein 488883 3764604 Suden_0482 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_392997.1 488647 D 326298 CDS YP_392998.1 78776683 3764605 488873..489301 1 NC_007575.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 489301 3764605 Suden_0483 Sulfurimonas denitrificans DSM 1251 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_392998.1 488873 D 326298 CDS YP_392999.1 78776684 3764606 489556..490248 1 NC_007575.1 dUTPase 490248 3764606 Suden_0484 Sulfurimonas denitrificans DSM 1251 dUTPase YP_392999.1 489556 D 326298 CDS YP_393000.1 78776685 3764607 490250..490819 1 NC_007575.1 ABC transporter-like protein 490819 3764607 Suden_0485 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393000.1 490250 D 326298 CDS YP_393001.1 78776686 3764608 complement(490809..491201) 1 NC_007575.1 camphor resistance CrcB protein 491201 3764608 Suden_0486 Sulfurimonas denitrificans DSM 1251 camphor resistance CrcB protein YP_393001.1 490809 R 326298 CDS YP_393002.1 78776687 3764609 complement(491167..491865) 1 NC_007575.1 phospholipid/glycerol acyltransferase 491865 3764609 Suden_0487 Sulfurimonas denitrificans DSM 1251 phospholipid/glycerol acyltransferase YP_393002.1 491167 R 326298 CDS YP_393003.1 78776688 3764610 complement(491843..492988) 1 NC_007575.1 hypothetical protein 492988 3764610 Suden_0488 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393003.1 491843 R 326298 CDS YP_393004.1 78776689 3764572 complement(492985..493659) 1 NC_007575.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 493659 3764572 Suden_0489 Sulfurimonas denitrificans DSM 1251 phosphoribosylformylglycinamidine synthase I YP_393004.1 492985 R 326298 CDS YP_393005.1 78776690 3764573 complement(493656..493898) 1 NC_007575.1 phosphoribosylformylglycinamidine synthetase PurS 493898 3764573 Suden_0490 Sulfurimonas denitrificans DSM 1251 phosphoribosylformylglycinamidine synthetase PurS YP_393005.1 493656 R 326298 CDS YP_393006.1 78776691 3764574 complement(493930..494643) 1 NC_007575.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 494643 3764574 Suden_0491 Sulfurimonas denitrificans DSM 1251 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_393006.1 493930 R 326298 CDS YP_393007.1 78776692 3764575 complement(494645..495964) 1 NC_007575.1 peptidase S41A, C-terminal protease 495964 3764575 Suden_0492 Sulfurimonas denitrificans DSM 1251 peptidase S41A, C-terminal protease YP_393007.1 494645 R 326298 CDS YP_393008.1 78776693 3764576 496106..496546 1 NC_007575.1 hemerythrin HHE cation binding protein 496546 3764576 Suden_0493 Sulfurimonas denitrificans DSM 1251 hemerythrin HHE cation binding protein YP_393008.1 496106 D 326298 CDS YP_393009.1 78776694 3764577 496559..497857 1 NC_007575.1 hypothetical protein 497857 3764577 Suden_0494 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393009.1 496559 D 326298 CDS YP_393010.1 78776695 3764578 497860..498375 1 NC_007575.1 shikimate kinase 498375 3764578 Suden_0495 Sulfurimonas denitrificans DSM 1251 shikimate kinase YP_393010.1 497860 D 326298 CDS YP_393011.1 78776696 3764579 498368..498784 1 NC_007575.1 hypothetical protein 498784 3764579 Suden_0496 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393011.1 498368 D 326298 CDS YP_393012.1 78776697 3764580 498788..500080 1 NC_007575.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 500080 hisD 3764580 hisD Sulfurimonas denitrificans DSM 1251 histidinol dehydrogenase YP_393012.1 498788 D 326298 CDS YP_393013.1 78776698 3764581 500272..500910 1 NC_007575.1 4Fe-4S ferredoxin 500910 3764581 Suden_0498 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_393013.1 500272 D 326298 CDS YP_393014.1 78776699 3764582 500910..501809 1 NC_007575.1 polysulfide reductase NrfD 501809 3764582 Suden_0499 Sulfurimonas denitrificans DSM 1251 polysulfide reductase NrfD YP_393014.1 500910 D 326298 CDS YP_393015.1 78776700 3764583 501822..505205 1 NC_007575.1 twin-arginine translocation pathway signal 505205 3764583 Suden_0500 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_393015.1 501822 D 326298 CDS YP_393016.1 78776701 3764584 complement(505253..505747) 1 NC_007575.1 thioredoxin 505747 3764584 Suden_0501 Sulfurimonas denitrificans DSM 1251 thioredoxin YP_393016.1 505253 R 326298 CDS YP_393017.1 78776702 3764585 505848..506324 1 NC_007575.1 hypothetical protein 506324 3764585 Suden_0502 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393017.1 505848 D 326298 CDS YP_393018.1 78776703 3764586 complement(506345..507994) 1 NC_007575.1 phosphate transporter 507994 3764586 Suden_0503 Sulfurimonas denitrificans DSM 1251 phosphate transporter YP_393018.1 506345 R 326298 CDS YP_393019.1 78776704 3764587 complement(508067..508612) 1 NC_007575.1 peptidyl-prolyl isomerase 508612 3764587 Suden_0504 Sulfurimonas denitrificans DSM 1251 peptidyl-prolyl isomerase YP_393019.1 508067 R 326298 CDS YP_393020.1 78776705 3764588 complement(508751..509035) 1 NC_007575.1 histone-like DNA-binding protein 509035 3764588 Suden_0505 Sulfurimonas denitrificans DSM 1251 histone-like DNA-binding protein YP_393020.1 508751 R 326298 CDS YP_393021.1 78776706 3764589 complement(509370..509609) 1 NC_007575.1 hypothetical protein 509609 3764589 Suden_0506 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393021.1 509370 R 326298 CDS YP_393022.1 78776707 3764590 complement(509836..511515) 1 NC_007575.1 hypothetical protein 511515 3764590 Suden_0507 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393022.1 509836 R 326298 CDS YP_393023.1 78776708 3764591 complement(511487..512173) 1 NC_007575.1 hypothetical protein 512173 3764591 Suden_0508 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393023.1 511487 R 326298 CDS YP_393024.1 78776709 3764464 512289..513362 1 NC_007575.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 513362 3764464 Suden_0509 Sulfurimonas denitrificans DSM 1251 fructose-bisphosphate aldolase YP_393024.1 512289 D 326298 CDS YP_393025.1 78776710 3764465 complement(513368..513670) 1 NC_007575.1 hypothetical protein 513670 3764465 Suden_0510 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393025.1 513368 R 326298 CDS YP_393026.1 78776711 3764466 513755..514462 1 NC_007575.1 methyltransferase 514462 3764466 Suden_0511 Sulfurimonas denitrificans DSM 1251 methyltransferase YP_393026.1 513755 D 326298 CDS YP_393027.1 78776712 3764467 514540..515223 1 NC_007575.1 cyclic nucleotide-binding protein 515223 3764467 Suden_0512 Sulfurimonas denitrificans DSM 1251 cyclic nucleotide-binding protein YP_393027.1 514540 D 326298 CDS YP_393028.1 78776713 3764468 515309..515752 1 NC_007575.1 heat shock protein Hsp20 515752 3764468 Suden_0513 Sulfurimonas denitrificans DSM 1251 heat shock protein Hsp20 YP_393028.1 515309 D 326298 CDS YP_393029.1 78776714 3764469 515763..516188 1 NC_007575.1 heat shock protein Hsp20 516188 3764469 Suden_0514 Sulfurimonas denitrificans DSM 1251 heat shock protein Hsp20 YP_393029.1 515763 D 326298 CDS YP_393030.1 78776715 3764470 complement(516234..516479) 1 NC_007575.1 hypothetical protein 516479 3764470 Suden_0515 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393030.1 516234 R 326298 CDS YP_393031.1 78776716 3764471 complement(516514..517200) 1 NC_007575.1 endonuclease III/Nth 517200 3764471 Suden_0516 Sulfurimonas denitrificans DSM 1251 endonuclease III/Nth YP_393031.1 516514 R 326298 CDS YP_393032.1 78776717 3764472 517240..518073 1 NC_007575.1 PpiC-type peptidyl-prolyl cis-trans isomerase 518073 3764472 Suden_0517 Sulfurimonas denitrificans DSM 1251 PpiC-type peptidyl-prolyl cis-trans isomerase YP_393032.1 517240 D 326298 CDS YP_393033.1 78776718 3764473 518077..518928 1 NC_007575.1 hypothetical protein 518928 3764473 Suden_0518 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393033.1 518077 D 326298 CDS YP_393034.1 78776719 3764474 complement(518921..519598) 1 NC_007575.1 nitroreductase 519598 3764474 Suden_0519 Sulfurimonas denitrificans DSM 1251 nitroreductase YP_393034.1 518921 R 326298 CDS YP_393035.1 78776720 3764475 519743..522319 1 NC_007575.1 ATPase AAA 522319 3764475 Suden_0520 Sulfurimonas denitrificans DSM 1251 ATPase AAA YP_393035.1 519743 D 326298 CDS YP_393036.1 78776721 3764476 522437..522571 1 NC_007575.1 50S ribosomal protein L34 522571 3764476 Suden_0521 Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L34 YP_393036.1 522437 D 326298 CDS YP_393037.1 78776722 3764477 522688..522927 1 NC_007575.1 ribonuclease P protein 522927 3764477 Suden_0522 Sulfurimonas denitrificans DSM 1251 ribonuclease P protein YP_393037.1 522688 D 326298 CDS YP_393038.1 78776723 3764478 522905..523249 1 NC_007575.1 hypothetical protein 523249 3764478 Suden_0523 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393038.1 522905 D 326298 CDS YP_393039.1 78776724 3764479 523234..524844 1 NC_007575.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 524844 3764479 Suden_0524 Sulfurimonas denitrificans DSM 1251 inner membrane protein translocase component YidC YP_393039.1 523234 D 326298 CDS YP_393040.1 78776725 3764480 524837..525841 1 NC_007575.1 hypothetical protein 525841 3764480 Suden_0525 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393040.1 524837 D 326298 CDS YP_393041.1 78776726 3764481 525845..527185 1 NC_007575.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 527185 trmE 3764481 trmE Sulfurimonas denitrificans DSM 1251 tRNA modification GTPase TrmE YP_393041.1 525845 D 326298 CDS YP_393042.1 78776727 3764482 527185..527577 1 NC_007575.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 527577 3764482 Suden_0527 Sulfurimonas denitrificans DSM 1251 Holliday junction resolvase-like protein YP_393042.1 527185 D 326298 CDS YP_393043.1 78776728 3764444 complement(527560..529683) 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 529683 3764444 Suden_0528 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393043.1 527560 R 326298 CDS YP_393044.1 78776729 3764445 complement(529772..530425) 1 NC_007575.1 hypothetical protein 530425 3764445 Suden_0529 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393044.1 529772 R 326298 CDS YP_393045.1 78776730 3764447 complement(530863..531552) 1 NC_007575.1 two component transcriptional regulator 531552 3764447 Suden_0531 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393045.1 530863 R 326298 CDS YP_393046.1 78776731 3764448 complement(531549..532262) 1 NC_007575.1 histidine kinase 532262 3764448 Suden_0532 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393046.1 531549 R 326298 CDS YP_393047.1 78776732 3764449 complement(532534..533031) 1 NC_007575.1 MarR family transcriptional regulator 533031 3764449 Suden_0533 Sulfurimonas denitrificans DSM 1251 MarR family transcriptional regulator YP_393047.1 532534 R 326298 CDS YP_393048.1 78776733 3764450 533126..534358 1 NC_007575.1 Outer membrane efflux protein 534358 3764450 Suden_0534 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_393048.1 533126 D 326298 CDS YP_393049.1 78776734 3764451 534359..535459 1 NC_007575.1 secretion protein HlyD 535459 3764451 Suden_0535 Sulfurimonas denitrificans DSM 1251 secretion protein HlyD YP_393049.1 534359 D 326298 CDS YP_393050.1 78776735 3764452 535461..538565 1 NC_007575.1 resistance-nodulation-cell division family transporter 538565 3764452 Suden_0536 Sulfurimonas denitrificans DSM 1251 resistance-nodulation-cell division family transporter YP_393050.1 535461 D 326298 CDS YP_393051.1 78776736 3764453 538770..540779 1 NC_007575.1 N-6 DNA methylase 540779 3764453 Suden_0537 Sulfurimonas denitrificans DSM 1251 N-6 DNA methylase YP_393051.1 538770 D 326298 CDS YP_393052.1 78776737 3764454 540797..541909 1 NC_007575.1 hypothetical protein 541909 3764454 Suden_0538 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393052.1 540797 D 326298 CDS YP_393053.1 78776738 3764455 541922..543001 1 NC_007575.1 hypothetical protein 543001 3764455 Suden_0539 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393053.1 541922 D 326298 CDS YP_393054.1 78776739 3764456 complement(543096..543716) 1 NC_007575.1 hypothetical protein 543716 3764456 Suden_0540 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393054.1 543096 R 326298 CDS YP_393055.1 78776740 3764457 543824..544846 1 NC_007575.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 544846 3764457 Suden_0541 Sulfurimonas denitrificans DSM 1251 ketol-acid reductoisomerase YP_393055.1 543824 D 326298 CDS YP_393056.1 78776741 3764458 complement(544990..545952) 1 NC_007575.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 545952 3764458 Suden_0542 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit delta YP_393056.1 544990 R 326298 CDS YP_393057.1 78776742 3764459 complement(545955..547904) 1 NC_007575.1 exoribonuclease II 547904 3764459 Suden_0543 Sulfurimonas denitrificans DSM 1251 exoribonuclease II YP_393057.1 545955 R 326298 CDS YP_393058.1 78776743 3764460 complement(547909..548706) 1 NC_007575.1 signal transduction protein 548706 3764460 Suden_0544 Sulfurimonas denitrificans DSM 1251 signal transduction protein YP_393058.1 547909 R 326298 CDS YP_393059.1 78776744 3764461 548833..549159 1 NC_007575.1 hypothetical protein 549159 3764461 Suden_0545 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393059.1 548833 D 326298 CDS YP_393060.1 78776745 3764462 549170..549694 1 NC_007575.1 GreA/GreB family elongation factor 549694 3764462 Suden_0546 Sulfurimonas denitrificans DSM 1251 GreA/GreB family elongation factor YP_393060.1 549170 D 326298 CDS YP_393061.1 78776746 3764463 549766..551979 1 NC_007575.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 551979 3764463 Suden_0547 Sulfurimonas denitrificans DSM 1251 phosphoribosylformylglycinamidine synthase II YP_393061.1 549766 D 326298 CDS YP_393062.1 78776747 3764535 complement(551976..552668) 1 NC_007575.1 hypothetical protein 552668 3764535 Suden_0548 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393062.1 551976 R 326298 CDS YP_393063.1 78776748 3764536 complement(552751..553710) 1 NC_007575.1 6-phosphofructokinase 553710 3764536 Suden_0549 Sulfurimonas denitrificans DSM 1251 6-phosphofructokinase YP_393063.1 552751 R 326298 CDS YP_393064.1 78776749 3764537 553798..555333 1 NC_007575.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 555333 purH 3764537 purH Sulfurimonas denitrificans DSM 1251 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_393064.1 553798 D 326298 CDS YP_393065.1 78776750 3764538 complement(555689..557716) 1 NC_007575.1 hypothetical protein 557716 3764538 Suden_0551 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393065.1 555689 R 326298 CDS YP_393066.1 78776751 3764539 557886..558740 1 NC_007575.1 hypothetical protein 558740 3764539 Suden_0552 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393066.1 557886 D 326298 CDS YP_393067.1 78776752 3764540 complement(558795..559916) 1 NC_007575.1 metallophosphoesterase 559916 3764540 Suden_0553 Sulfurimonas denitrificans DSM 1251 metallophosphoesterase YP_393067.1 558795 R 326298 CDS YP_393068.1 78776753 3764541 560033..560905 1 NC_007575.1 molecular chaperone DnaJ 560905 3764541 Suden_0554 Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaJ YP_393068.1 560033 D 326298 CDS YP_393069.1 78776754 3764542 560909..561286 1 NC_007575.1 MerR family transcriptional regulator 561286 3764542 Suden_0555 Sulfurimonas denitrificans DSM 1251 MerR family transcriptional regulator YP_393069.1 560909 D 326298 CDS YP_393070.1 78776755 3764543 complement(561437..562705) 1 NC_007575.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 562705 3764543 Suden_0556 Sulfurimonas denitrificans DSM 1251 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_393070.1 561437 R 326298 CDS YP_393071.1 78776756 3764544 562793..563221 1 NC_007575.1 hypothetical protein 563221 3764544 Suden_0557 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393071.1 562793 D 326298 CDS YP_393072.1 78776757 3764545 563214..563753 1 NC_007575.1 hypothetical protein 563753 3764545 Suden_0558 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393072.1 563214 D 326298 CDS YP_393073.1 78776758 3764546 563747..564451 1 NC_007575.1 exonuclease 564451 3764546 Suden_0559 Sulfurimonas denitrificans DSM 1251 exonuclease YP_393073.1 563747 D 326298 CDS YP_393074.1 78776759 3764547 564507..564896 1 NC_007575.1 hypothetical protein 564896 3764547 Suden_0560 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393074.1 564507 D 326298 CDS YP_393075.1 78776760 3764548 564886..565476 1 NC_007575.1 hypothetical protein 565476 3764548 Suden_0561 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393075.1 564886 D 326298 CDS YP_393076.1 78776761 3764549 565522..566577 1 NC_007575.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 566577 flgI 3764549 flgI Sulfurimonas denitrificans DSM 1251 flagellar basal body P-ring biosynthesis protein FlgA YP_393076.1 565522 D 326298 CDS YP_393077.1 78776762 3764550 566577..566879 1 NC_007575.1 hypothetical protein 566879 3764550 Suden_0563 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393077.1 566577 D 326298 CDS YP_393078.1 78776763 3764551 566973..567182 1 NC_007575.1 hypothetical protein 567182 3764551 Suden_0564 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393078.1 566973 D 326298 CDS YP_393079.1 78776764 3764552 567213..567641 1 NC_007575.1 hypothetical protein 567641 3764552 Suden_0565 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393079.1 567213 D 326298 CDS YP_393080.1 78776765 3764553 567643..569529 1 NC_007575.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 569529 flgK 3764553 flgK Sulfurimonas denitrificans DSM 1251 flagellar hook-associated protein FlgK YP_393080.1 567643 D 326298 CDS YP_393081.1 78776766 3764519 569537..570331 1 NC_007575.1 binding-protein dependent transport system inner membrane protein 570331 3764519 Suden_0567 Sulfurimonas denitrificans DSM 1251 binding-protein dependent transport system inner membrane protein YP_393081.1 569537 D 326298 CDS YP_393082.1 78776767 3764520 570415..570984 1 NC_007575.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 570984 3764520 Suden_0568 Sulfurimonas denitrificans DSM 1251 anthranilate synthase component II YP_393082.1 570415 D 326298 CDS YP_393083.1 78776768 3764521 570981..572174 1 NC_007575.1 integral membrane protein 572174 3764521 Suden_0569 Sulfurimonas denitrificans DSM 1251 integral membrane protein YP_393083.1 570981 D 326298 CDS YP_393084.1 78776769 3764522 572262..573596 1 NC_007575.1 ATP-dependent citrate lyase subunit beta 573596 3764522 Suden_0570 Sulfurimonas denitrificans DSM 1251 ATP-dependent citrate lyase subunit beta YP_393084.1 572262 D 326298 CDS YP_393085.1 78776770 3764523 573606..575420 1 NC_007575.1 ATP-dependent citrate lyase subunit alpha 575420 3764523 Suden_0571 Sulfurimonas denitrificans DSM 1251 ATP-dependent citrate lyase subunit alpha YP_393085.1 573606 D 326298 CDS YP_393086.1 78776771 3764524 575563..576213 1 NC_007575.1 N-terminal methylation 576213 3764524 Suden_0572 Sulfurimonas denitrificans DSM 1251 N-terminal methylation YP_393086.1 575563 D 326298 CDS YP_393087.1 78776772 3764529 582220..582807 1 NC_007575.1 phosphoheptose isomerase 582807 3764529 Suden_0573 Sulfurimonas denitrificans DSM 1251 phosphoheptose isomerase YP_393087.1 582220 D 326298 CDS YP_393088.1 78776773 3764530 582814..583320 1 NC_007575.1 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase 583320 3764530 Suden_0574 Sulfurimonas denitrificans DSM 1251 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase YP_393088.1 582814 D 326298 CDS YP_393089.1 78776774 3764531 583323..583808 1 NC_007575.1 asparaginase 583808 3764531 Suden_0575 Sulfurimonas denitrificans DSM 1251 asparaginase YP_393089.1 583323 D 326298 CDS YP_393090.1 78776775 3764532 583783..586236 1 NC_007575.1 copper-translocating P-type ATPase 586236 3764532 Suden_0576 Sulfurimonas denitrificans DSM 1251 copper-translocating P-type ATPase YP_393090.1 583783 D 326298 CDS YP_393091.1 78776776 3764533 586239..586454 1 NC_007575.1 cytochrome oxidase maturation protein cbb3-type 586454 3764533 Suden_0577 Sulfurimonas denitrificans DSM 1251 cytochrome oxidase maturation protein cbb3-type YP_393091.1 586239 D 326298 CDS YP_393092.1 78776777 3764534 complement(586490..586774) 1 NC_007575.1 cytochrome c-553 586774 3764534 Suden_0578 Sulfurimonas denitrificans DSM 1251 cytochrome c-553 YP_393092.1 586490 R 326298 CDS YP_393093.1 78776778 3764385 586888..587898 1 NC_007575.1 ADP-L-glycero-D-manno-heptose-6-epimerase 587898 3764385 Suden_0579 Sulfurimonas denitrificans DSM 1251 ADP-L-glycero-D-manno-heptose-6-epimerase YP_393093.1 586888 D 326298 CDS YP_393094.1 78776779 3764386 587895..589328 1 NC_007575.1 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase 589328 3764386 Suden_0580 Sulfurimonas denitrificans DSM 1251 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase YP_393094.1 587895 D 326298 CDS YP_393095.1 78776780 3764387 589321..589893 1 NC_007575.1 hypothetical protein 589893 3764387 Suden_0581 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393095.1 589321 D 326298 CDS YP_393096.1 78776781 3764388 complement(589904..590881) 1 NC_007575.1 lipopolysaccharide heptosyltransferase II 590881 3764388 Suden_0582 Sulfurimonas denitrificans DSM 1251 lipopolysaccharide heptosyltransferase II YP_393096.1 589904 R 326298 CDS YP_393097.1 78776782 3764389 complement(590878..592143) 1 NC_007575.1 hypothetical protein 592143 3764389 Suden_0583 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393097.1 590878 R 326298 CDS YP_393098.1 78776783 3764390 592181..592999 1 NC_007575.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 592999 3764390 Suden_0584 Sulfurimonas denitrificans DSM 1251 DNA ligase YP_393098.1 592181 D 326298 CDS YP_393099.1 78776784 3764391 592999..593967 1 NC_007575.1 heptosyltransferase-like protein 593967 3764391 Suden_0585 Sulfurimonas denitrificans DSM 1251 heptosyltransferase-like protein YP_393099.1 592999 D 326298 CDS YP_393100.1 78776785 3764392 complement(593968..594717) 1 NC_007575.1 glycosyl transferase 594717 3764392 Suden_0586 Sulfurimonas denitrificans DSM 1251 glycosyl transferase YP_393100.1 593968 R 326298 CDS YP_393101.1 78776786 3764393 complement(594707..595441) 1 NC_007575.1 hypothetical protein 595441 3764393 Suden_0587 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393101.1 594707 R 326298 CDS YP_393102.1 78776787 3764394 complement(595431..596534) 1 NC_007575.1 group 1 glycosyl transferase 596534 3764394 Suden_0588 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_393102.1 595431 R 326298 CDS YP_393103.1 78776788 3764395 complement(596531..597511) 1 NC_007575.1 lipopolysaccharide heptosyltransferase I 597511 3764395 Suden_0589 Sulfurimonas denitrificans DSM 1251 lipopolysaccharide heptosyltransferase I YP_393103.1 596531 R 326298 CDS YP_393104.1 78776789 3764396 complement(597511..598254) 1 NC_007575.1 hexapaptide repeat-containing transferase 598254 3764396 Suden_0590 Sulfurimonas denitrificans DSM 1251 hexapaptide repeat-containing transferase YP_393104.1 597511 R 326298 CDS YP_393105.1 78776790 3764397 598344..600044 1 NC_007575.1 ABC transporter-like protein 600044 3764397 Suden_0591 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393105.1 598344 D 326298 CDS YP_393106.1 78776791 3764398 600064..601269 1 NC_007575.1 polysaccharide biosynthesis protein CapD 601269 3764398 Suden_0592 Sulfurimonas denitrificans DSM 1251 polysaccharide biosynthesis protein CapD YP_393106.1 600064 D 326298 CDS YP_393107.1 78776792 3764399 601256..602407 1 NC_007575.1 DegT/DnrJ/EryC1/StrS aminotransferase 602407 3764399 Suden_0593 Sulfurimonas denitrificans DSM 1251 DegT/DnrJ/EryC1/StrS aminotransferase YP_393107.1 601256 D 326298 CDS YP_393108.1 78776793 3764400 602407..602982 1 NC_007575.1 acetyl transferase 602982 3764400 Suden_0594 Sulfurimonas denitrificans DSM 1251 acetyl transferase YP_393108.1 602407 D 326298 CDS YP_393109.1 78776794 3764401 602979..603980 1 NC_007575.1 N-acetylneuraminate synthase 603980 3764401 Suden_0595 Sulfurimonas denitrificans DSM 1251 N-acetylneuraminate synthase YP_393109.1 602979 D 326298 CDS YP_393110.1 78776795 3764402 603977..604858 1 NC_007575.1 hypothetical protein 604858 3764402 Suden_0596 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393110.1 603977 D 326298 CDS YP_393111.1 78776796 3764403 604855..606018 1 NC_007575.1 UDP-N-acetylglucosamine 2-epimerase 606018 3764403 Suden_0597 Sulfurimonas denitrificans DSM 1251 UDP-N-acetylglucosamine 2-epimerase YP_393111.1 604855 D 326298 CDS YP_393112.1 78776797 3764404 606021..607067 1 NC_007575.1 nucleotidyl transferase 607067 3764404 Suden_0598 Sulfurimonas denitrificans DSM 1251 nucleotidyl transferase YP_393112.1 606021 D 326298 CDS YP_393113.1 78776798 3764500 607067..607783 1 NC_007575.1 acylneuraminate cytidylyltransferase 607783 3764500 Suden_0599 Sulfurimonas denitrificans DSM 1251 acylneuraminate cytidylyltransferase YP_393113.1 607067 D 326298 CDS YP_393114.1 78776799 3764501 607783..608805 1 NC_007575.1 oxidoreductase-like 608805 3764501 Suden_0600 Sulfurimonas denitrificans DSM 1251 oxidoreductase-like YP_393114.1 607783 D 326298 CDS YP_393115.1 78776800 3764502 608789..610081 1 NC_007575.1 catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde 2,1-aminomutase 610081 3764502 Suden_0601 Sulfurimonas denitrificans DSM 1251 glutamate-1-semialdehyde 2,1-aminomutase YP_393115.1 608789 D 326298 CDS YP_393116.1 78776801 3764503 610081..610863 1 NC_007575.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 610863 3764503 Suden_0602 Sulfurimonas denitrificans DSM 1251 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_393116.1 610081 D 326298 CDS YP_393117.1 78776802 3764504 610863..611633 1 NC_007575.1 flagellin modification protein A 611633 3764504 Suden_0603 Sulfurimonas denitrificans DSM 1251 flagellin modification protein A YP_393117.1 610863 D 326298 CDS YP_393118.1 78776803 3764505 611693..612664 1 NC_007575.1 hypothetical protein 612664 3764505 Suden_0604 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393118.1 611693 D 326298 CDS YP_393119.1 78776804 3764506 612687..613691 1 NC_007575.1 hypothetical protein 613691 3764506 Suden_0605 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393119.1 612687 D 326298 CDS YP_393120.1 78776805 3764507 613769..615136 1 NC_007575.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 615136 3764507 Suden_0606 Sulfurimonas denitrificans DSM 1251 coproporphyrinogen III oxidase YP_393120.1 613769 D 326298 CDS YP_393121.1 78776806 3764508 615139..616422 1 NC_007575.1 hypothetical protein 616422 3764508 Suden_0607 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393121.1 615139 D 326298 CDS YP_393122.1 78776807 3764509 616429..617253 1 NC_007575.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 617253 3764509 Suden_0608 Sulfurimonas denitrificans DSM 1251 prolipoprotein diacylglyceryl transferase YP_393122.1 616429 D 326298 CDS YP_393123.1 78776808 3764510 complement(617250..617741) 1 NC_007575.1 hypothetical protein 617741 3764510 Suden_0609 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393123.1 617250 R 326298 CDS YP_393124.1 78776809 3764511 617837..619135 1 NC_007575.1 DEAD/DEAH box helicase 619135 3764511 Suden_0610 Sulfurimonas denitrificans DSM 1251 DEAD/DEAH box helicase YP_393124.1 617837 D 326298 CDS YP_393125.1 78776810 3764512 619142..619867 1 NC_007575.1 pseudouridine synthase 619867 3764512 Suden_0611 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_393125.1 619142 D 326298 CDS YP_393126.1 78776811 3764513 619918..620361 1 NC_007575.1 hypothetical protein 620361 3764513 Suden_0612 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393126.1 619918 D 326298 CDS YP_393127.1 78776812 3764514 620391..622226 1 NC_007575.1 with PAS/PAC sensor; diguanylate cyclase 622226 3764514 Suden_0613 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393127.1 620391 D 326298 CDS YP_393128.1 78776813 3764515 complement(622560..623015) 1 NC_007575.1 hypothetical protein 623015 3764515 Suden_0614 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393128.1 622560 R 326298 CDS YP_393129.1 78776814 3764516 complement(623084..624691) 1 NC_007575.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 624691 3764516 Suden_0615 Sulfurimonas denitrificans DSM 1251 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_393129.1 623084 R 326298 CDS YP_393130.1 78776815 3764517 624857..625606 1 NC_007575.1 two component transcriptional regulator 625606 3764517 Suden_0616 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393130.1 624857 D 326298 CDS YP_393131.1 78776816 3764518 complement(625618..628272) 1 NC_007575.1 multi-sensor hybrid histidine kinase 628272 3764518 Suden_0617 Sulfurimonas denitrificans DSM 1251 multi-sensor hybrid histidine kinase YP_393131.1 625618 R 326298 CDS YP_393132.1 78776817 3764207 complement(628288..629139) 1 NC_007575.1 formylmethionine deformylase 629139 3764207 Suden_0618 Sulfurimonas denitrificans DSM 1251 formylmethionine deformylase YP_393132.1 628288 R 326298 CDS YP_393133.1 78776818 3764208 complement(629338..630807) 1 NC_007575.1 sulfide-quinone reductase 630807 3764208 Suden_0619 Sulfurimonas denitrificans DSM 1251 sulfide-quinone reductase YP_393133.1 629338 R 326298 CDS YP_393134.1 78776819 3764209 complement(630924..633482) 1 NC_007575.1 aminopeptidase 633482 pepN 3764209 pepN Sulfurimonas denitrificans DSM 1251 aminopeptidase YP_393134.1 630924 R 326298 CDS YP_393135.1 78776820 3764210 complement(633531..634406) 1 NC_007575.1 AraC family transcriptional regulator 634406 3764210 Suden_0621 Sulfurimonas denitrificans DSM 1251 AraC family transcriptional regulator YP_393135.1 633531 R 326298 CDS YP_393136.1 78776821 3764211 634552..636009 1 NC_007575.1 biotin carboxylase 636009 3764211 Suden_0622 Sulfurimonas denitrificans DSM 1251 biotin carboxylase YP_393136.1 634552 D 326298 CDS YP_393137.1 78776822 3764212 636089..637447 1 NC_007575.1 phosphomannomutase 637447 3764212 Suden_0623 Sulfurimonas denitrificans DSM 1251 phosphomannomutase YP_393137.1 636089 D 326298 CDS YP_393138.1 78776823 3764213 637509..638516 1 NC_007575.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 638516 3764213 Suden_0624 Sulfurimonas denitrificans DSM 1251 dihydroorotase YP_393138.1 637509 D 326298 CDS YP_393139.1 78776824 3764214 638509..639162 1 NC_007575.1 two component transcriptional regulator 639162 3764214 Suden_0625 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393139.1 638509 D 326298 CDS YP_393140.1 78776825 3764215 639212..639982 1 NC_007575.1 histidine kinase 639982 3764215 Suden_0626 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393140.1 639212 D 326298 CDS YP_393141.1 78776826 3764216 639982..640431 1 NC_007575.1 MotA/TolQ/ExbB proton channel 640431 3764216 Suden_0627 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_393141.1 639982 D 326298 CDS YP_393142.1 78776827 3764217 640438..640830 1 NC_007575.1 biopolymer transport protein ExbD/TolR 640830 3764217 Suden_0628 Sulfurimonas denitrificans DSM 1251 biopolymer transport protein ExbD/TolR YP_393142.1 640438 D 326298 CDS YP_393143.1 78776828 3764218 complement(640831..641070) 1 NC_007575.1 hypothetical protein 641070 3764218 Suden_0629 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393143.1 640831 R 326298 CDS YP_393144.1 78776829 3764219 641182..641691 1 NC_007575.1 atypical 2-Cys peroxiredoxin; thiol peroxidase 641691 3764219 Suden_0630 Sulfurimonas denitrificans DSM 1251 thiol peroxidase YP_393144.1 641182 D 326298 CDS YP_393145.1 78776830 3764220 complement(641742..643370) 1 NC_007575.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 643370 groEL 3764220 groEL Sulfurimonas denitrificans DSM 1251 molecular chaperone GroEL YP_393145.1 641742 R 326298 CDS YP_393146.1 78776831 3764221 complement(643404..643664) 1 NC_007575.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 643664 groES 3764221 groES Sulfurimonas denitrificans DSM 1251 co-chaperonin GroES YP_393146.1 643404 R 326298 CDS YP_393147.1 78776832 3764369 complement(644445..645377) 1 NC_007575.1 radical SAM family protein 645377 3764369 Suden_0633 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_393147.1 644445 R 326298 CDS YP_393148.1 78776833 3764370 complement(645378..646409) 1 NC_007575.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 646409 hemE 3764370 hemE Sulfurimonas denitrificans DSM 1251 uroporphyrinogen decarboxylase YP_393148.1 645378 R 326298 CDS YP_393149.1 78776834 3764371 complement(646430..646948) 1 NC_007575.1 hypothetical protein 646948 3764371 Suden_0635 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393149.1 646430 R 326298 CDS YP_393150.1 78776835 3764372 complement(646952..647986) 1 NC_007575.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 647986 3764372 Suden_0636 Sulfurimonas denitrificans DSM 1251 aspartate-semialdehyde dehydrogenase YP_393150.1 646952 R 326298 CDS YP_393151.1 78776836 3764373 complement(648014..649168) 1 NC_007575.1 response regulator receiver domain-containing protein 649168 3764373 Suden_0637 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393151.1 648014 R 326298 CDS YP_393152.1 78776837 3764374 complement(649168..649590) 1 NC_007575.1 hypothetical protein 649590 3764374 Suden_0638 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393152.1 649168 R 326298 CDS YP_393153.1 78776838 3764375 complement(649536..650114) 1 NC_007575.1 hypothetical protein 650114 3764375 Suden_0639 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393153.1 649536 R 326298 CDS YP_393154.1 78776839 3764376 complement(650160..652643) 1 NC_007575.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 652643 3764376 Suden_0640 Sulfurimonas denitrificans DSM 1251 DNA gyrase subunit A YP_393154.1 650160 R 326298 CDS YP_393155.1 78776840 3764377 652866..654116 1 NC_007575.1 ammonium transporter 654116 3764377 Suden_0641 Sulfurimonas denitrificans DSM 1251 ammonium transporter YP_393155.1 652866 D 326298 CDS YP_393156.1 78776841 3764378 654245..654583 1 NC_007575.1 nitrogen regulatory protein P-II 654583 3764378 Suden_0642 Sulfurimonas denitrificans DSM 1251 nitrogen regulatory protein P-II YP_393156.1 654245 D 326298 CDS YP_393157.1 78776842 3764379 654669..655844 1 NC_007575.1 Rh-like protein/ammonium transporter 655844 3764379 Suden_0643 Sulfurimonas denitrificans DSM 1251 Rh-like protein/ammonium transporter YP_393157.1 654669 D 326298 CDS YP_393158.1 78776843 3764380 655887..656588 1 NC_007575.1 TonB-like protein 656588 3764380 Suden_0644 Sulfurimonas denitrificans DSM 1251 TonB-like protein YP_393158.1 655887 D 326298 CDS YP_393159.1 78776844 3764381 656677..658656 1 NC_007575.1 diguanylate cyclase 658656 3764381 Suden_0645 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393159.1 656677 D 326298 CDS YP_393160.1 78776845 3764382 658673..659428 1 NC_007575.1 3'(2'),5'-bisphosphate nucleotidase 659428 3764382 Suden_0646 Sulfurimonas denitrificans DSM 1251 3'(2'),5'-bisphosphate nucleotidase YP_393160.1 658673 D 326298 CDS YP_393161.1 78776846 3764425 659937..660695 1 NC_007575.1 TraT complement resistance 660695 3764425 Suden_0647 Sulfurimonas denitrificans DSM 1251 TraT complement resistance YP_393161.1 659937 D 326298 CDS YP_393162.1 78776847 3764426 660791..661714 1 NC_007575.1 von Willebrand factor A 661714 3764426 Suden_0648 Sulfurimonas denitrificans DSM 1251 von Willebrand factor A YP_393162.1 660791 D 326298 CDS YP_393163.1 78776848 3764427 661711..663126 1 NC_007575.1 von Willebrand factor A 663126 3764427 Suden_0649 Sulfurimonas denitrificans DSM 1251 von Willebrand factor A YP_393163.1 661711 D 326298 CDS YP_393164.1 78776849 3764428 663107..664222 1 NC_007575.1 hypothetical protein 664222 3764428 Suden_0650 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393164.1 663107 D 326298 CDS YP_393165.1 78776850 3764429 664269..665273 1 NC_007575.1 hypothetical protein 665273 3764429 Suden_0651 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393165.1 664269 D 326298 CDS YP_393166.1 78776851 3764430 665273..666271 1 NC_007575.1 hypothetical protein 666271 3764430 Suden_0652 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393166.1 665273 D 326298 CDS YP_393167.1 78776852 3764431 666433..667380 1 NC_007575.1 ATPase 667380 3764431 Suden_0653 Sulfurimonas denitrificans DSM 1251 ATPase YP_393167.1 666433 D 326298 CDS YP_393168.1 78776853 3764432 667388..668218 1 NC_007575.1 hypothetical protein 668218 3764432 Suden_0654 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393168.1 667388 D 326298 CDS YP_393169.1 78776854 3764433 668218..668625 1 NC_007575.1 hypothetical protein 668625 3764433 Suden_0655 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393169.1 668218 D 326298 CDS YP_393170.1 78776855 3764434 668618..669547 1 NC_007575.1 von Willebrand factor A 669547 3764434 Suden_0656 Sulfurimonas denitrificans DSM 1251 von Willebrand factor A YP_393170.1 668618 D 326298 CDS YP_393171.1 78776856 3764435 669544..671331 1 NC_007575.1 von Willebrand factor A 671331 3764435 Suden_0657 Sulfurimonas denitrificans DSM 1251 von Willebrand factor A YP_393171.1 669544 D 326298 CDS YP_393172.1 78776857 3764436 671315..672775 1 NC_007575.1 hypothetical protein 672775 3764436 Suden_0658 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393172.1 671315 D 326298 CDS YP_393173.1 78776858 3764437 complement(672772..673602) 1 NC_007575.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 673602 3764437 Suden_0659 Sulfurimonas denitrificans DSM 1251 prephenate dehydrogenase YP_393173.1 672772 R 326298 CDS YP_393174.1 78776859 3764438 673702..675969 1 NC_007575.1 surface antigen (D15) 675969 3764438 Suden_0660 Sulfurimonas denitrificans DSM 1251 surface antigen (D15) YP_393174.1 673702 D 326298 CDS YP_393175.1 78776860 3764439 complement(676068..677537) 1 NC_007575.1 Ppx/GppA phosphatase 677537 3764439 Suden_0661 Sulfurimonas denitrificans DSM 1251 Ppx/GppA phosphatase YP_393175.1 676068 R 326298 CDS YP_393176.1 78776861 3764440 complement(677546..677800) 1 NC_007575.1 4Fe-4S ferredoxin 677800 3764440 Suden_0662 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_393176.1 677546 R 326298 CDS YP_393177.1 78776862 3764441 complement(677913..679211) 1 NC_007575.1 histidine kinase 679211 3764441 Suden_0663 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393177.1 677913 R 326298 CDS YP_393178.1 78776863 3764442 complement(679389..680102) 1 NC_007575.1 two component transcriptional regulator 680102 3764442 Suden_0664 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393178.1 679389 R 326298 CDS YP_393179.1 78776864 3764443 complement(680166..680495) 1 NC_007575.1 dihydroneopterin aldolase 680495 3764443 Suden_0665 Sulfurimonas denitrificans DSM 1251 dihydroneopterin aldolase YP_393179.1 680166 R 326298 CDS YP_393180.1 78776865 3764405 complement(680492..681106) 1 NC_007575.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 681106 3764405 Suden_0666 Sulfurimonas denitrificans DSM 1251 glycerol-3-phosphate acyltransferase PlsY YP_393180.1 680492 R 326298 CDS YP_393181.1 78776866 3764406 681223..682221 1 NC_007575.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 682221 3764406 Suden_0667 Sulfurimonas denitrificans DSM 1251 quinolinate synthetase YP_393181.1 681223 D 326298 CDS YP_393182.1 78776867 3764407 682218..683033 1 NC_007575.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 683033 3764407 Suden_0668 Sulfurimonas denitrificans DSM 1251 nicotinate-nucleotide pyrophosphorylase YP_393182.1 682218 D 326298 CDS YP_393183.1 78776868 3764408 683042..684094 1 NC_007575.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 684094 flhB 3764408 flhB Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis protein FlhB YP_393183.1 683042 D 326298 CDS YP_393184.1 78776869 3764409 684132..685013 1 NC_007575.1 exopolyphosphatase 685013 3764409 Suden_0670 Sulfurimonas denitrificans DSM 1251 exopolyphosphatase YP_393184.1 684132 D 326298 CDS YP_393185.1 78776870 3764410 685089..686384 1 NC_007575.1 peptidase M23B 686384 3764410 Suden_0671 Sulfurimonas denitrificans DSM 1251 peptidase M23B YP_393185.1 685089 D 326298 CDS YP_393186.1 78776871 3764411 686417..687301 1 NC_007575.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 687301 lpxC 3764411 lpxC Sulfurimonas denitrificans DSM 1251 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_393186.1 686417 D 326298 CDS YP_393187.1 78776872 3764412 687294..687755 1 NC_007575.1 hypothetical protein 687755 3764412 Suden_0673 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393187.1 687294 D 326298 CDS YP_393188.1 78776873 3764413 687763..688644 1 NC_007575.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 688644 3764413 Suden_0674 Sulfurimonas denitrificans DSM 1251 homoserine kinase YP_393188.1 687763 D 326298 CDS YP_393189.1 78776874 3764414 688688..688951 1 NC_007575.1 hypothetical protein 688951 3764414 Suden_0675 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393189.1 688688 D 326298 CDS YP_393190.1 78776875 3764415 688935..691559 1 NC_007575.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 691559 infB 3764415 infB Sulfurimonas denitrificans DSM 1251 translation initiation factor IF-2 YP_393190.1 688935 D 326298 CDS YP_393191.1 78776876 3764416 691556..691906 1 NC_007575.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 691906 rbfA 3764416 rbfA Sulfurimonas denitrificans DSM 1251 ribosome-binding factor A YP_393191.1 691556 D 326298 CDS YP_393192.1 78776877 3764417 691919..692368 1 NC_007575.1 hypothetical protein 692368 3764417 Suden_0678 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393192.1 691919 D 326298 CDS YP_393193.1 78776878 3764418 692362..693372 1 NC_007575.1 riboflavin biosynthesis protein RibD 693372 3764418 Suden_0679 Sulfurimonas denitrificans DSM 1251 riboflavin biosynthesis protein RibD YP_393193.1 692362 D 326298 CDS YP_393194.1 78776879 3764419 693376..694095 1 NC_007575.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 694095 ubiE 3764419 ubiE Sulfurimonas denitrificans DSM 1251 ubiquinone/menaquinone biosynthesis methyltransferase YP_393194.1 693376 D 326298 CDS YP_393195.1 78776880 3764420 694105..695355 1 NC_007575.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 695355 xseA 3764420 xseA Sulfurimonas denitrificans DSM 1251 exodeoxyribonuclease VII large subunit YP_393195.1 694105 D 326298 CDS YP_393196.1 78776881 3764421 695364..695960 1 NC_007575.1 hypothetical protein 695960 3764421 Suden_0682 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393196.1 695364 D 326298 CDS YP_393197.1 78776882 3764422 696021..696431 1 NC_007575.1 hypothetical protein 696431 3764422 Suden_0683 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393197.1 696021 D 326298 CDS YP_393198.1 78776883 3764423 696436..696903 1 NC_007575.1 methylated-DNA--protein-cysteine methyltransferase 696903 3764423 Suden_0684 Sulfurimonas denitrificans DSM 1251 methylated-DNA--protein-cysteine methyltransferase YP_393198.1 696436 D 326298 CDS YP_393199.1 78776884 3764424 complement(696906..697775) 1 NC_007575.1 peptidase S49, SppA 697775 3764424 Suden_0685 Sulfurimonas denitrificans DSM 1251 peptidase S49, SppA YP_393199.1 696906 R 326298 CDS YP_393200.1 78776885 3764350 complement(697775..699001) 1 NC_007575.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 699001 3764350 Suden_0686 Sulfurimonas denitrificans DSM 1251 chlorohydrolase YP_393200.1 697775 R 326298 CDS YP_393201.1 78776886 3764351 699094..699576 1 NC_007575.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 699576 3764351 Suden_0687 Sulfurimonas denitrificans DSM 1251 3-dehydroquinate dehydratase YP_393201.1 699094 D 326298 CDS YP_393202.1 78776887 3764352 699580..700065 1 NC_007575.1 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 700065 3764352 Suden_0688 Sulfurimonas denitrificans DSM 1251 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_393202.1 699580 D 326298 CDS YP_393203.1 78776888 3764353 700062..700445 1 NC_007575.1 hypothetical protein 700445 3764353 Suden_0689 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393203.1 700062 D 326298 CDS YP_393204.1 78776889 3764354 complement(700491..702143) 1 NC_007575.1 hypothetical protein 702143 3764354 Suden_0690 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393204.1 700491 R 326298 CDS YP_393205.1 78776890 3764355 complement(702140..703537) 1 NC_007575.1 hypothetical protein 703537 3764355 Suden_0691 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393205.1 702140 R 326298 CDS YP_393206.1 78776891 3764356 703830..704477 1 NC_007575.1 hypothetical protein 704477 3764356 Suden_0692 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393206.1 703830 D 326298 CDS YP_393207.1 78776892 3764357 704470..706326 1 NC_007575.1 integrase catalytic subunit 706326 3764357 Suden_0693 Sulfurimonas denitrificans DSM 1251 integrase catalytic subunit YP_393207.1 704470 D 326298 CDS YP_393208.1 78776893 3764358 706330..707271 1 NC_007575.1 TniB protein 707271 3764358 Suden_0694 Sulfurimonas denitrificans DSM 1251 TniB protein YP_393208.1 706330 D 326298 CDS YP_393209.1 78776894 3764359 707268..708404 1 NC_007575.1 hypothetical protein 708404 3764359 Suden_0695 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393209.1 707268 D 326298 CDS YP_393210.1 78776895 3764360 complement(708415..708771) 1 NC_007575.1 transposase 708771 3764360 Suden_0696 Sulfurimonas denitrificans DSM 1251 transposase YP_393210.1 708415 R 326298 CDS YP_393211.1 78776896 3764361 708945..710537 1 NC_007575.1 N-6 DNA methylase 710537 3764361 Suden_0697 Sulfurimonas denitrificans DSM 1251 N-6 DNA methylase YP_393211.1 708945 D 326298 CDS YP_393212.1 78776897 3764362 710538..710921 1 NC_007575.1 hypothetical protein 710921 3764362 Suden_0698 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393212.1 710538 D 326298 CDS YP_393213.1 78776898 3764363 710963..711967 1 NC_007575.1 hypothetical protein 711967 3764363 Suden_0699 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393213.1 710963 D 326298 CDS YP_393214.1 78776899 3764364 711970..714114 1 NC_007575.1 ATPase 714114 3764364 Suden_0700 Sulfurimonas denitrificans DSM 1251 ATPase YP_393214.1 711970 D 326298 CDS YP_393215.1 78776900 3764365 714098..716308 1 NC_007575.1 hypothetical protein 716308 3764365 Suden_0701 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393215.1 714098 D 326298 CDS YP_393216.1 78776901 3764366 complement(716298..717803) 1 NC_007575.1 hypothetical protein 717803 3764366 Suden_0702 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393216.1 716298 R 326298 CDS YP_393217.1 78776902 3764367 717883..718971 1 NC_007575.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 718971 flhF 3764367 flhF Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis regulator FlhF YP_393217.1 717883 D 326298 CDS YP_393218.1 78776903 3764368 718968..719843 1 NC_007575.1 cobyrinic acid a,c-diamide synthase 719843 3764368 Suden_0704 Sulfurimonas denitrificans DSM 1251 cobyrinic acid a,c-diamide synthase YP_393218.1 718968 D 326298 CDS YP_393219.1 78776904 3764334 719863..720195 1 NC_007575.1 hypothetical protein 720195 3764334 Suden_0705 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393219.1 719863 D 326298 CDS YP_393220.1 78776905 3764335 720192..720875 1 NC_007575.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 720875 fliA 3764335 fliA Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis sigma factor YP_393220.1 720192 D 326298 CDS YP_393221.1 78776906 3764336 720877..721995 1 NC_007575.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 721995 fliM 3764336 fliM Sulfurimonas denitrificans DSM 1251 flagellar motor switch protein FliM YP_393221.1 720877 D 326298 CDS YP_393222.1 78776907 3764337 721999..722850 1 NC_007575.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 722850 3764337 Suden_0708 Sulfurimonas denitrificans DSM 1251 flagellar motor switch protein FliY YP_393222.1 721999 D 326298 CDS YP_393223.1 78776908 3764338 722865..723644 1 NC_007575.1 hypothetical protein 723644 3764338 Suden_0709 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393223.1 722865 D 326298 CDS YP_393224.1 78776909 3764339 723637..724662 1 NC_007575.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 724662 mnmA 3764339 mnmA Sulfurimonas denitrificans DSM 1251 tRNA-specific 2-thiouridylase MnmA YP_393224.1 723637 D 326298 CDS YP_393225.1 78776910 3764344 complement(730402..731406) 1 NC_007575.1 hypothetical protein 731406 3764344 Suden_0711 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393225.1 730402 R 326298 CDS YP_393226.1 78776911 3764345 complement(731406..733355) 1 NC_007575.1 oligopeptidase A 733355 3764345 Suden_0712 Sulfurimonas denitrificans DSM 1251 oligopeptidase A YP_393226.1 731406 R 326298 CDS YP_393227.1 78776912 3764346 complement(733359..734447) 1 NC_007575.1 peptidase S1 and S6, chymotrypsin/Hap 734447 3764346 Suden_0713 Sulfurimonas denitrificans DSM 1251 peptidase S1 and S6, chymotrypsin/Hap YP_393227.1 733359 R 326298 CDS YP_393228.1 78776913 3764347 complement(734450..735763) 1 NC_007575.1 hypothetical protein 735763 3764347 Suden_0714 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393228.1 734450 R 326298 CDS YP_393229.1 78776914 3764348 735942..737492 1 NC_007575.1 diguanylate cyclase 737492 3764348 Suden_0715 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393229.1 735942 D 326298 CDS YP_393230.1 78776915 3764349 737557..738369 1 NC_007575.1 formate/nitrite transporter 738369 3764349 Suden_0716 Sulfurimonas denitrificans DSM 1251 formate/nitrite transporter YP_393230.1 737557 D 326298 CDS YP_393231.1 78776916 3764264 738544..739257 1 NC_007575.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 739257 pyrH 3764264 pyrH Sulfurimonas denitrificans DSM 1251 uridylate kinase YP_393231.1 738544 D 326298 CDS YP_393232.1 78776917 3764265 739289..739507 1 NC_007575.1 RNA polymerase Rpb6 739507 3764265 Suden_0718 Sulfurimonas denitrificans DSM 1251 RNA polymerase Rpb6 YP_393232.1 739289 D 326298 CDS YP_393233.1 78776918 3764266 739518..741665 1 NC_007575.1 metal dependent phosphohydrolase 741665 3764266 Suden_0719 Sulfurimonas denitrificans DSM 1251 metal dependent phosphohydrolase YP_393233.1 739518 D 326298 CDS YP_393234.1 78776919 3764267 741717..742916 1 NC_007575.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 742916 3764267 Suden_0720 Sulfurimonas denitrificans DSM 1251 tyrosyl-tRNA synthetase YP_393234.1 741717 D 326298 CDS YP_393235.1 78776920 3764268 742916..744007 1 NC_007575.1 2-nitropropane dioxygenase 744007 3764268 Suden_0721 Sulfurimonas denitrificans DSM 1251 2-nitropropane dioxygenase YP_393235.1 742916 D 326298 CDS YP_393236.1 78776921 3764269 744016..745425 1 NC_007575.1 N-acetylmuramoyl-L-alanine amidase 745425 3764269 Suden_0722 Sulfurimonas denitrificans DSM 1251 N-acetylmuramoyl-L-alanine amidase YP_393236.1 744016 D 326298 CDS YP_393237.1 78776922 3764270 complement(745442..746521) 1 NC_007575.1 hypothetical protein 746521 3764270 Suden_0723 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393237.1 745442 R 326298 CDS YP_393238.1 78776923 3764271 complement(746536..748707) 1 NC_007575.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 748707 flhA 3764271 flhA Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis protein FlhA YP_393238.1 746536 R 326298 CDS YP_393239.1 78776924 3764272 complement(748712..749113) 1 NC_007575.1 BadM/Rrf2 family transcriptional regulator 749113 3764272 Suden_0725 Sulfurimonas denitrificans DSM 1251 BadM/Rrf2 family transcriptional regulator YP_393239.1 748712 R 326298 CDS YP_393240.1 78776925 3764273 749250..749525 1 NC_007575.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 749525 rpsO 3764273 rpsO Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S15 YP_393240.1 749250 D 326298 CDS YP_393241.1 78776926 3764274 complement(749688..750404) 1 NC_007575.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 750404 3764274 Suden_0727 Sulfurimonas denitrificans DSM 1251 3-deoxy-manno-octulosonate cytidylyltransferase YP_393241.1 749688 R 326298 CDS YP_393242.1 78776927 3764275 750469..751164 1 NC_007575.1 methyltransferase small 751164 3764275 Suden_0728 Sulfurimonas denitrificans DSM 1251 methyltransferase small YP_393242.1 750469 D 326298 CDS YP_393243.1 78776928 3764276 751152..751535 1 NC_007575.1 hypothetical protein 751535 3764276 Suden_0729 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393243.1 751152 D 326298 CDS YP_393244.1 78776929 3764277 751525..752808 1 NC_007575.1 hypothetical protein 752808 3764277 Suden_0730 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393244.1 751525 D 326298 CDS YP_393245.1 78776930 3764278 752805..753596 1 NC_007575.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 753596 trpC 3764278 trpC Sulfurimonas denitrificans DSM 1251 indole-3-glycerol phosphate synthase YP_393245.1 752805 D 326298 CDS YP_393246.1 78776931 3764279 complement(753617..754060) 1 NC_007575.1 hypothetical protein 754060 3764279 Suden_0732 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393246.1 753617 R 326298 CDS YP_393247.1 78776932 3764280 754138..754860 1 NC_007575.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 754860 flgH 3764280 flgH Sulfurimonas denitrificans DSM 1251 flagellar basal body L-ring protein YP_393247.1 754138 D 326298 CDS YP_393248.1 78776933 3764281 754985..756280 1 NC_007575.1 hypothetical protein 756280 3764281 Suden_0734 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393248.1 754985 D 326298 CDS YP_393249.1 78776934 3764282 756284..757495 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 757495 3764282 Suden_0735 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393249.1 756284 D 326298 CDS YP_393250.1 78776935 3764283 complement(757479..759116) 1 NC_007575.1 sulfate anion transporter 759116 3764283 Suden_0736 Sulfurimonas denitrificans DSM 1251 sulfate anion transporter YP_393250.1 757479 R 326298 CDS YP_393251.1 78776936 3764315 complement(759123..761750) 1 NC_007575.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 761750 valS 3764315 valS Sulfurimonas denitrificans DSM 1251 valyl-tRNA synthetase YP_393251.1 759123 R 326298 CDS YP_393252.1 78776937 3764316 complement(761899..762723) 1 NC_007575.1 diguanylate cyclase 762723 3764316 Suden_0738 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393252.1 761899 R 326298 CDS YP_393253.1 78776938 3764317 762850..763347 1 NC_007575.1 rubrerythrin 763347 3764317 Suden_0739 Sulfurimonas denitrificans DSM 1251 rubrerythrin YP_393253.1 762850 D 326298 CDS YP_393254.1 78776939 3764318 763443..765521 1 NC_007575.1 UvrD/REP helicase 765521 3764318 Suden_0740 Sulfurimonas denitrificans DSM 1251 UvrD/REP helicase YP_393254.1 763443 D 326298 CDS YP_393255.1 78776940 3764319 765562..766101 1 NC_007575.1 cytochrome c, class I 766101 3764319 Suden_0741 Sulfurimonas denitrificans DSM 1251 cytochrome c, class I YP_393255.1 765562 D 326298 CDS YP_393256.1 78776941 3764320 complement(766108..767319) 1 NC_007575.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 767319 3764320 Suden_0742 Sulfurimonas denitrificans DSM 1251 tryptophan synthase subunit beta YP_393256.1 766108 R 326298 CDS YP_393257.1 78776942 3764321 767428..767850 1 NC_007575.1 hypothetical protein 767850 3764321 Suden_0743 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393257.1 767428 D 326298 CDS YP_393258.1 78776943 3764322 complement(767844..768626) 1 NC_007575.1 hypothetical protein 768626 3764322 Suden_0744 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393258.1 767844 R 326298 CDS YP_393259.1 78776944 3764323 768793..770130 1 NC_007575.1 dGTPase type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 770130 3764323 Suden_0745 Sulfurimonas denitrificans DSM 1251 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_393259.1 768793 D 326298 CDS YP_393260.1 78776945 3764324 complement(770318..772021) 1 NC_007575.1 hemolysin activation/secretion protein-like protein 772021 3764324 Suden_0746 Sulfurimonas denitrificans DSM 1251 hemolysin activation/secretion protein-like protein YP_393260.1 770318 R 326298 CDS YP_393261.1 78776946 3764325 complement(772033..773397) 1 NC_007575.1 GLUG 773397 3764325 Suden_0747 Sulfurimonas denitrificans DSM 1251 GLUG YP_393261.1 772033 R 326298 CDS YP_393262.1 78776947 3764326 complement(773673..774845) 1 NC_007575.1 filamentous hemagglutinin 774845 3764326 Suden_0748 Sulfurimonas denitrificans DSM 1251 filamentous hemagglutinin YP_393262.1 773673 R 326298 CDS YP_393263.1 78776948 3764327 774979..775671 1 NC_007575.1 two component transcriptional regulator 775671 3764327 Suden_0749 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393263.1 774979 D 326298 CDS YP_393264.1 78776949 3764328 775673..777523 1 NC_007575.1 histidine kinase 777523 3764328 Suden_0750 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393264.1 775673 D 326298 CDS YP_393265.1 78776950 3764329 777675..779696 1 NC_007575.1 polysaccharide deacetylase 779696 3764329 Suden_0751 Sulfurimonas denitrificans DSM 1251 polysaccharide deacetylase YP_393265.1 777675 D 326298 CDS YP_393266.1 78776951 3764330 779706..781007 1 NC_007575.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 781007 3764330 Suden_0752 Sulfurimonas denitrificans DSM 1251 N-glycosyltransferase YP_393266.1 779706 D 326298 CDS YP_393267.1 78776952 3764331 781010..781447 1 NC_007575.1 hypothetical protein 781447 3764331 Suden_0753 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393267.1 781010 D 326298 CDS YP_393268.1 78776953 3764332 complement(781444..782634) 1 NC_007575.1 hypothetical protein 782634 3764332 Suden_0754 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393268.1 781444 R 326298 CDS YP_393269.1 78776954 3764333 complement(782634..784856) 1 NC_007575.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 784856 3764333 Suden_0755 Sulfurimonas denitrificans DSM 1251 recombination and DNA strand exchange inhibitor protein YP_393269.1 782634 R 326298 CDS YP_393270.1 78776955 3764187 complement(784847..785176) 1 NC_007575.1 hypothetical protein 785176 3764187 Suden_0756 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393270.1 784847 R 326298 CDS YP_393271.1 78776956 3764188 complement(785176..786489) 1 NC_007575.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 786489 murC 3764188 murC Sulfurimonas denitrificans DSM 1251 UDP-N-acetylmuramate--L-alanine ligase YP_393271.1 785176 R 326298 CDS YP_393272.1 78776957 3764189 complement(786494..787000) 1 NC_007575.1 hypothetical protein 787000 3764189 Suden_0758 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393272.1 786494 R 326298 CDS YP_393273.1 78776958 3764190 complement(786997..788133) 1 NC_007575.1 hypothetical protein 788133 3764190 Suden_0759 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393273.1 786997 R 326298 CDS YP_393274.1 78776959 3764191 complement(788195..788719) 1 NC_007575.1 hypothetical protein 788719 3764191 Suden_0760 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393274.1 788195 R 326298 CDS YP_393275.1 78776960 3764192 complement(788716..789393) 1 NC_007575.1 UBA/THIF-type NAD/FAD binding fold 789393 3764192 Suden_0761 Sulfurimonas denitrificans DSM 1251 UBA/THIF-type NAD/FAD binding fold YP_393275.1 788716 R 326298 CDS YP_393276.1 78776961 3764193 complement(789390..790187) 1 NC_007575.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 790187 3764193 Suden_0762 Sulfurimonas denitrificans DSM 1251 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_393276.1 789390 R 326298 CDS YP_393277.1 78776962 3764194 complement(790187..790456) 1 NC_007575.1 hypothetical protein 790456 3764194 Suden_0763 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393277.1 790187 R 326298 CDS YP_393278.1 78776963 3764195 complement(790482..791591) 1 NC_007575.1 homoserine O-acetyltransferase 791591 3764195 Suden_0764 Sulfurimonas denitrificans DSM 1251 homoserine O-acetyltransferase YP_393278.1 790482 R 326298 CDS YP_393279.1 78776964 3764196 complement(791595..792860) 1 NC_007575.1 O-acetylhomoserine/O-acetylserine sulfhydrylase 792860 3764196 Suden_0765 Sulfurimonas denitrificans DSM 1251 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_393279.1 791595 R 326298 CDS YP_393280.1 78776965 3764197 complement(792937..793323) 1 NC_007575.1 hypothetical protein 793323 3764197 Suden_0766 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393280.1 792937 R 326298 CDS YP_393281.1 78776966 3764198 complement(793344..794306) 1 NC_007575.1 C4-dicarboxylate transporter/malic acid transport protein 794306 3764198 Suden_0767 Sulfurimonas denitrificans DSM 1251 C4-dicarboxylate transporter/malic acid transport protein YP_393281.1 793344 R 326298 CDS YP_393282.1 78776967 3764199 794462..795502 1 NC_007575.1 hypothetical protein 795502 3764199 Suden_0768 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393282.1 794462 D 326298 CDS YP_393283.1 78776968 3764200 complement(795514..796005) 1 NC_007575.1 RDD protein 796005 3764200 Suden_0769 Sulfurimonas denitrificans DSM 1251 RDD protein YP_393283.1 795514 R 326298 CDS YP_393284.1 78776969 3764201 complement(796010..797455) 1 NC_007575.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 797455 3764201 Suden_0770 Sulfurimonas denitrificans DSM 1251 inosine 5'-monophosphate dehydrogenase YP_393284.1 796010 R 326298 CDS YP_393285.1 78776970 3764202 797631..798431 1 NC_007575.1 hypothetical protein 798431 3764202 Suden_0771 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393285.1 797631 D 326298 CDS YP_393286.1 78776971 3764203 complement(798450..798734) 1 NC_007575.1 heavy metal transport/detoxification protein 798734 3764203 Suden_0772 Sulfurimonas denitrificans DSM 1251 heavy metal transport/detoxification protein YP_393286.1 798450 R 326298 CDS YP_393287.1 78776972 3764204 complement(798759..800102) 1 NC_007575.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 800102 gatA 3764204 gatA Sulfurimonas denitrificans DSM 1251 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_393287.1 798759 R 326298 CDS YP_393288.1 78776973 3764205 complement(800252..800938) 1 NC_007575.1 Fic family protein 800938 3764205 Suden_0774 Sulfurimonas denitrificans DSM 1251 Fic family protein YP_393288.1 800252 R 326298 CDS YP_393289.1 78776974 3764206 complement(800940..802622) 1 NC_007575.1 hypothetical protein 802622 3764206 Suden_0775 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393289.1 800940 R 326298 CDS YP_393290.1 78776975 3764302 complement(802640..803602) 1 NC_007575.1 hypothetical protein 803602 3764302 Suden_0776 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393290.1 802640 R 326298 CDS YP_393291.1 78776976 3764303 complement(803994..804770) 1 NC_007575.1 hypothetical protein 804770 3764303 Suden_0777 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393291.1 803994 R 326298 CDS YP_393292.1 78776977 3764304 complement(804773..805027) 1 NC_007575.1 hypothetical protein 805027 3764304 Suden_0778 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393292.1 804773 R 326298 CDS YP_393293.1 78776978 3764305 805318..806280 1 NC_007575.1 integron integrase 806280 3764305 Suden_0779 Sulfurimonas denitrificans DSM 1251 integron integrase YP_393293.1 805318 D 326298 CDS YP_393294.1 78776979 3764306 complement(806382..809141) 1 NC_007575.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 809141 ileS 3764306 ileS Sulfurimonas denitrificans DSM 1251 isoleucyl-tRNA synthetase YP_393294.1 806382 R 326298 CDS YP_393295.1 78776980 3764307 809263..810351 1 NC_007575.1 CinA-like protein 810351 3764307 Suden_0781 Sulfurimonas denitrificans DSM 1251 CinA-like protein YP_393295.1 809263 D 326298 CDS YP_393296.1 78776981 3764314 complement(811188..812336) 1 NC_007575.1 cell cycle protein 812336 3764314 Suden_0782 Sulfurimonas denitrificans DSM 1251 cell cycle protein YP_393296.1 811188 R 326298 CDS YP_393297.1 78776982 3764284 812350..813321 1 NC_007575.1 pseudouridine synthase 813321 3764284 Suden_0783 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_393297.1 812350 D 326298 CDS YP_393298.1 78776983 3764285 813344..814678 1 NC_007575.1 fibronectin type III 814678 3764285 Suden_0784 Sulfurimonas denitrificans DSM 1251 fibronectin type III YP_393298.1 813344 D 326298 CDS YP_393299.1 78776984 3764286 814690..815862 1 NC_007575.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 815862 trmB 3764286 trmB Sulfurimonas denitrificans DSM 1251 tRNA (guanine-N(7)-)-methyltransferase YP_393299.1 814690 D 326298 CDS YP_393300.1 78776985 3764287 815855..816526 1 NC_007575.1 ABC transporter-like protein 816526 3764287 Suden_0786 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393300.1 815855 D 326298 CDS YP_393301.1 78776986 3764288 816513..817325 1 NC_007575.1 hypothetical protein 817325 3764288 Suden_0787 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393301.1 816513 D 326298 CDS YP_393302.1 78776987 3764289 817322..818548 1 NC_007575.1 peptidase M23B 818548 3764289 Suden_0788 Sulfurimonas denitrificans DSM 1251 peptidase M23B YP_393302.1 817322 D 326298 CDS YP_393303.1 78776988 3764290 818616..820088 1 NC_007575.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 820088 3764290 Suden_0789 Sulfurimonas denitrificans DSM 1251 threonine synthase YP_393303.1 818616 D 326298 CDS YP_393304.1 78776989 3764291 820123..820761 1 NC_007575.1 hypothetical protein 820761 3764291 Suden_0790 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393304.1 820123 D 326298 CDS YP_393305.1 78776990 3764292 complement(820861..821619) 1 NC_007575.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 821619 3764292 Suden_0791 Sulfurimonas denitrificans DSM 1251 pyrroline-5-carboxylate reductase YP_393305.1 820861 R 326298 CDS YP_393306.1 78776991 3764293 821696..822928 1 NC_007575.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 822928 proA 3764293 proA Sulfurimonas denitrificans DSM 1251 gamma-glutamyl phosphate reductase YP_393306.1 821696 D 326298 CDS YP_393307.1 78776992 3764294 823029..823370 1 NC_007575.1 hypothetical protein 823370 3764294 Suden_0793 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393307.1 823029 D 326298 CDS YP_393308.1 78776993 3764295 823380..824615 1 NC_007575.1 hypothetical protein 824615 3764295 Suden_0794 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393308.1 823380 D 326298 CDS YP_393309.1 78776994 3764296 824625..824927 1 NC_007575.1 hypothetical protein 824927 3764296 Suden_0795 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393309.1 824625 D 326298 CDS YP_393310.1 78776995 3764297 complement(824924..825910) 1 NC_007575.1 response regulator receiver domain-containing protein 825910 3764297 Suden_0796 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393310.1 824924 R 326298 CDS YP_393311.1 78776996 3764298 826014..826937 1 NC_007575.1 S-adenosyl-methyltransferase MraW 826937 mraW 3764298 mraW Sulfurimonas denitrificans DSM 1251 S-adenosyl-methyltransferase MraW YP_393311.1 826014 D 326298 CDS YP_393312.1 78776997 3764299 826934..827212 1 NC_007575.1 hypothetical protein 827212 3764299 Suden_0798 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393312.1 826934 D 326298 CDS YP_393313.1 78776998 3764300 827222..830356 1 NC_007575.1 acriflavin resistance protein 830356 3764300 Suden_0799 Sulfurimonas denitrificans DSM 1251 acriflavin resistance protein YP_393313.1 827222 D 326298 CDS YP_393314.1 78776999 3764244 complement(830503..831612) 1 NC_007575.1 Phage integrase 831612 3764244 Suden_0800 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_393314.1 830503 R 326298 CDS YP_393315.1 78777000 3764245 complement(831670..831903) 1 NC_007575.1 hypothetical protein 831903 3764245 Suden_0801 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393315.1 831670 R 326298 CDS YP_393316.1 78777001 3764246 complement(831907..833580) 1 NC_007575.1 DnaB-like protein helicase-like protein 833580 3764246 Suden_0802 Sulfurimonas denitrificans DSM 1251 DnaB-like protein helicase-like protein YP_393316.1 831907 R 326298 CDS YP_393317.1 78777002 3764247 complement(833577..834197) 1 NC_007575.1 hypothetical protein 834197 3764247 Suden_0803 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393317.1 833577 R 326298 CDS YP_393318.1 78777003 3764248 834315..835025 1 NC_007575.1 hypothetical protein 835025 3764248 Suden_0804 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393318.1 834315 D 326298 CDS YP_393319.1 78777004 3764249 complement(835845..839126) 1 NC_007575.1 hypothetical protein 839126 3764249 Suden_0805 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393319.1 835845 R 326298 CDS YP_393320.1 78777005 3764250 complement(839156..842503) 1 NC_007575.1 hypothetical protein 842503 3764250 Suden_0806 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393320.1 839156 R 326298 CDS YP_393321.1 78777006 3764251 complement(842513..842998) 1 NC_007575.1 hypothetical protein 842998 3764251 Suden_0807 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393321.1 842513 R 326298 CDS YP_393322.1 78777007 3764252 complement(843000..843437) 1 NC_007575.1 CopG family transcriptional regulator 843437 3764252 Suden_0808 Sulfurimonas denitrificans DSM 1251 CopG family transcriptional regulator YP_393322.1 843000 R 326298 CDS YP_393323.1 78777008 3764253 complement(843734..844363) 1 NC_007575.1 hypothetical protein 844363 3764253 Suden_0809 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393323.1 843734 R 326298 CDS YP_393324.1 78777009 3764254 844491..844793 1 NC_007575.1 hypothetical protein 844793 3764254 Suden_0810 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393324.1 844491 D 326298 CDS YP_393325.1 78777010 3764255 844796..845098 1 NC_007575.1 hypothetical protein 845098 3764255 Suden_0811 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393325.1 844796 D 326298 CDS YP_393326.1 78777011 3764256 complement(845155..845409) 1 NC_007575.1 plasmid stabilization system protein 845409 3764256 Suden_0812 Sulfurimonas denitrificans DSM 1251 plasmid stabilization system protein YP_393326.1 845155 R 326298 CDS YP_393327.1 78777012 3764257 complement(845399..845614) 1 NC_007575.1 CopG family transcriptional regulator 845614 3764257 Suden_0813 Sulfurimonas denitrificans DSM 1251 CopG family transcriptional regulator YP_393327.1 845399 R 326298 CDS YP_393328.1 78777013 3764258 846136..846381 1 NC_007575.1 hypothetical protein 846381 3764258 Suden_0814 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393328.1 846136 D 326298 CDS YP_393329.1 78777014 3764259 846381..846653 1 NC_007575.1 plasmid stabilization system protein 846653 3764259 Suden_0815 Sulfurimonas denitrificans DSM 1251 plasmid stabilization system protein YP_393329.1 846381 D 326298 CDS YP_393330.1 78777015 3764260 complement(846911..847891) 1 NC_007575.1 cysteine sulfinate desulfinase/cysteine desulfurase 847891 3764260 Suden_0816 Sulfurimonas denitrificans DSM 1251 cysteine sulfinate desulfinase/cysteine desulfurase YP_393330.1 846911 R 326298 CDS YP_393331.1 78777016 3764261 complement(847911..848741) 1 NC_007575.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 848741 3764261 Suden_0817 Sulfurimonas denitrificans DSM 1251 formate dehydrogenase accessory protein YP_393331.1 847911 R 326298 CDS YP_393332.1 78777017 3764262 complement(848748..849695) 1 NC_007575.1 hypothetical protein 849695 3764262 Suden_0818 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393332.1 848748 R 326298 CDS YP_393333.1 78777018 3764263 complement(849705..850295) 1 NC_007575.1 4Fe-4S ferredoxin 850295 3764263 Suden_0819 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_393333.1 849705 R 326298 CDS YP_393335.2 159162019 3764226 complement(850305..853103) 1 NC_007575.1 formate dehydrogenase alpha subunit 853103 3764226 Suden_0820 Sulfurimonas denitrificans DSM 1251 formate dehydrogenase alpha subunit YP_393335.2 850305 R 326298 CDS YP_393336.1 78777021 3764227 complement(853254..853478) 1 NC_007575.1 twin-arginine translocation pathway signal 853478 3764227 Suden_0822 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_393336.1 853254 R 326298 CDS YP_393337.1 78777022 3764228 complement(853554..854168) 1 NC_007575.1 hypothetical protein 854168 3764228 Suden_0823 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393337.1 853554 R 326298 CDS YP_393338.1 78777023 3764229 complement(854161..855834) 1 NC_007575.1 4Fe-4S ferredoxin 855834 3764229 Suden_0824 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_393338.1 854161 R 326298 CDS YP_393339.1 78777024 3764230 855986..857128 1 NC_007575.1 ABC transporter substrate-binding protein 857128 3764230 Suden_0825 Sulfurimonas denitrificans DSM 1251 ABC transporter substrate-binding protein YP_393339.1 855986 D 326298 CDS YP_393340.1 78777025 3764231 857118..858707 1 NC_007575.1 histidine kinase 858707 3764231 Suden_0826 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393340.1 857118 D 326298 CDS YP_393341.1 78777026 3764232 858697..859362 1 NC_007575.1 response regulator receiver domain-containing protein 859362 3764232 Suden_0827 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393341.1 858697 D 326298 CDS YP_393342.1 78777027 3764233 complement(859433..859678) 1 NC_007575.1 hypothetical protein 859678 3764233 Suden_0828 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393342.1 859433 R 326298 CDS YP_393343.1 78777028 3764234 complement(859668..860888) 1 NC_007575.1 inner membrane protein 860888 3764234 Suden_0829 Sulfurimonas denitrificans DSM 1251 inner membrane protein YP_393343.1 859668 R 326298 CDS YP_393344.1 78777029 3764235 861234..862211 1 NC_007575.1 selenophosphate synthase 862211 3764235 Suden_0830 Sulfurimonas denitrificans DSM 1251 selenophosphate synthase YP_393344.1 861234 D 326298 CDS YP_393345.1 78777030 3764236 862375..863724 1 NC_007575.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 863724 3764236 Suden_0831 Sulfurimonas denitrificans DSM 1251 selenocysteine synthase YP_393345.1 862375 D 326298 CDS YP_393346.1 78777031 3764237 863717..865552 1 NC_007575.1 translation elongation factor, selenocysteine-specific 865552 3764237 Suden_0832 Sulfurimonas denitrificans DSM 1251 translation elongation factor, selenocysteine-specific YP_393346.1 863717 D 326298 CDS YP_393347.1 78777032 3764239 866505..866720 1 NC_007575.1 hypothetical protein 866720 3764239 Suden_0834 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393347.1 866505 D 326298 CDS YP_393348.1 78777033 3764240 867022..867327 1 NC_007575.1 hypothetical protein 867327 3764240 Suden_0835 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393348.1 867022 D 326298 CDS YP_393349.1 78777034 3764241 complement(867589..869052) 1 NC_007575.1 diguanylate cyclase 869052 3764241 Suden_0836 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393349.1 867589 R 326298 CDS YP_393350.1 78777035 3764242 complement(869079..869888) 1 NC_007575.1 two component transcriptional regulator 869888 3764242 Suden_0837 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393350.1 869079 R 326298 CDS YP_393351.1 78777036 3764243 869922..870125 1 NC_007575.1 sulfur carrier protein ThiS 870125 3764243 Suden_0838 Sulfurimonas denitrificans DSM 1251 sulfur carrier protein ThiS YP_393351.1 869922 D 326298 CDS YP_393352.1 78777037 3764149 complement(870102..870467) 1 NC_007575.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 870467 acpS 3764149 acpS Sulfurimonas denitrificans DSM 1251 4'-phosphopantetheinyl transferase YP_393352.1 870102 R 326298 CDS YP_393353.1 78777038 3764150 complement(870468..871031) 1 NC_007575.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 871031 fliL 3764150 fliL Sulfurimonas denitrificans DSM 1251 flagellar basal body protein FliL YP_393353.1 870468 R 326298 CDS YP_393354.1 78777039 3764151 complement(871097..871354) 1 NC_007575.1 hypothetical protein 871354 3764151 Suden_0841 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393354.1 871097 R 326298 CDS YP_393355.1 78777040 3764152 complement(871434..872780) 1 NC_007575.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 872780 3764152 Suden_0842 Sulfurimonas denitrificans DSM 1251 DNA repair protein RadA YP_393355.1 871434 R 326298 CDS YP_393356.1 78777041 3764153 complement(872885..873763) 1 NC_007575.1 cell division transporter substrate-binding protein FtsY 873763 3764153 Suden_0843 Sulfurimonas denitrificans DSM 1251 cell division transporter substrate-binding protein FtsY YP_393356.1 872885 R 326298 CDS YP_393357.1 78777042 3764154 complement(873766..874323) 1 NC_007575.1 lipoprotein thiredoxin 874323 3764154 Suden_0844 Sulfurimonas denitrificans DSM 1251 lipoprotein thiredoxin YP_393357.1 873766 R 326298 CDS YP_393358.1 78777043 3764155 874388..874960 1 NC_007575.1 5-formyltetrahydrofolate cyclo-ligase 874960 3764155 Suden_0845 Sulfurimonas denitrificans DSM 1251 5-formyltetrahydrofolate cyclo-ligase YP_393358.1 874388 D 326298 CDS YP_393359.1 78777044 3764156 874962..876530 1 NC_007575.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 876530 3764156 Suden_0846 Sulfurimonas denitrificans DSM 1251 phosphodiesterase YP_393359.1 874962 D 326298 CDS YP_393360.1 78777045 3764157 complement(876533..877426) 1 NC_007575.1 cation efflux protein 877426 3764157 Suden_0847 Sulfurimonas denitrificans DSM 1251 cation efflux protein YP_393360.1 876533 R 326298 CDS YP_393361.1 78777046 3764158 877487..878377 1 NC_007575.1 Generic methyltransferase 878377 3764158 Suden_0848 Sulfurimonas denitrificans DSM 1251 Generic methyltransferase YP_393361.1 877487 D 326298 CDS YP_393362.1 78777047 3764159 878374..878868 1 NC_007575.1 thioesterase 878868 3764159 Suden_0849 Sulfurimonas denitrificans DSM 1251 thioesterase YP_393362.1 878374 D 326298 CDS YP_393363.1 78777048 3764160 complement(878877..879470) 1 NC_007575.1 Beta-lactamase-like 879470 3764160 Suden_0850 Sulfurimonas denitrificans DSM 1251 Beta-lactamase-like YP_393363.1 878877 R 326298 CDS YP_393364.1 78777049 3764161 879601..880374 1 NC_007575.1 NAD(+) synthase 880374 3764161 Suden_0851 Sulfurimonas denitrificans DSM 1251 NAD(+) synthase YP_393364.1 879601 D 326298 CDS YP_393365.1 78777050 3764162 880384..881505 1 NC_007575.1 DegT/DnrJ/EryC1/StrS aminotransferase 881505 3764162 Suden_0852 Sulfurimonas denitrificans DSM 1251 DegT/DnrJ/EryC1/StrS aminotransferase YP_393365.1 880384 D 326298 CDS YP_393366.1 78777051 3764163 881588..882415 1 NC_007575.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 882415 lpxK 3764163 lpxK Sulfurimonas denitrificans DSM 1251 tetraacyldisaccharide 4'-kinase YP_393366.1 881588 D 326298 CDS YP_393367.1 78777052 3764164 882416..883267 1 NC_007575.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 883267 3764164 Suden_0854 Sulfurimonas denitrificans DSM 1251 acetylglutamate kinase YP_393367.1 882416 D 326298 CDS YP_393368.1 78777053 3764165 complement(883252..884409) 1 NC_007575.1 FAD dependent oxidoreductase 884409 3764165 Suden_0855 Sulfurimonas denitrificans DSM 1251 FAD dependent oxidoreductase YP_393368.1 883252 R 326298 CDS YP_393369.1 78777054 3764166 884508..884810 1 NC_007575.1 hypothetical protein 884810 3764166 Suden_0856 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393369.1 884508 D 326298 CDS YP_393370.1 78777055 3764167 884811..885224 1 NC_007575.1 hypothetical protein 885224 3764167 Suden_0857 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393370.1 884811 D 326298 CDS YP_393371.1 78777056 3764168 885239..886126 1 NC_007575.1 polyprenyl synthetase 886126 3764168 Suden_0858 Sulfurimonas denitrificans DSM 1251 polyprenyl synthetase YP_393371.1 885239 D 326298 CDS YP_393372.1 78777057 3764130 886126..887424 1 NC_007575.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 887424 hemA 3764130 hemA Sulfurimonas denitrificans DSM 1251 glutamyl-tRNA reductase YP_393372.1 886126 D 326298 CDS YP_393373.1 78777058 3764131 887425..888732 1 NC_007575.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 888732 3764131 Suden_0860 Sulfurimonas denitrificans DSM 1251 prolyl-tRNA synthetase YP_393373.1 887425 D 326298 CDS YP_393374.1 78777059 3764132 888732..889157 1 NC_007575.1 hypothetical protein 889157 3764132 Suden_0861 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393374.1 888732 D 326298 CDS YP_393375.1 78777060 3764133 889210..889941 1 NC_007575.1 DSBA oxidoreductase 889941 3764133 Suden_0862 Sulfurimonas denitrificans DSM 1251 DSBA oxidoreductase YP_393375.1 889210 D 326298 CDS YP_393376.1 78777061 3764134 889942..890883 1 NC_007575.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 890883 hemC 3764134 hemC Sulfurimonas denitrificans DSM 1251 porphobilinogen deaminase YP_393376.1 889942 D 326298 CDS YP_393377.1 78777062 3764135 890886..892703 1 NC_007575.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 892703 3764135 Suden_0864 Sulfurimonas denitrificans DSM 1251 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_393377.1 890886 D 326298 CDS YP_393378.1 78777063 3764136 892786..893127 1 NC_007575.1 hypothetical protein 893127 3764136 Suden_0865 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393378.1 892786 D 326298 CDS YP_393379.1 78777064 3764137 893236..894618 1 NC_007575.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 894618 3764137 Suden_0866 Sulfurimonas denitrificans DSM 1251 argininosuccinate lyase YP_393379.1 893236 D 326298 CDS YP_393380.1 78777065 3764138 894619..895083 1 NC_007575.1 OsmC-like protein 895083 3764138 Suden_0867 Sulfurimonas denitrificans DSM 1251 OsmC-like protein YP_393380.1 894619 D 326298 CDS YP_393381.1 78777066 3764139 complement(895091..895489) 1 NC_007575.1 histidine triad (HIT) protein 895489 3764139 Suden_0868 Sulfurimonas denitrificans DSM 1251 histidine triad (HIT) protein YP_393381.1 895091 R 326298 CDS YP_393382.1 78777067 3764140 895612..896604 1 NC_007575.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 896604 pheS 3764140 pheS Sulfurimonas denitrificans DSM 1251 phenylalanyl-tRNA synthetase subunit alpha YP_393382.1 895612 D 326298 CDS YP_393383.1 78777068 3764141 896601..898937 1 NC_007575.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 898937 pheT 3764141 pheT Sulfurimonas denitrificans DSM 1251 phenylalanyl-tRNA synthetase subunit beta YP_393383.1 896601 D 326298 CDS YP_393384.1 78777069 3764142 898934..900220 1 NC_007575.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 900220 3764142 Suden_0871 Sulfurimonas denitrificans DSM 1251 3-phosphoshikimate 1-carboxyvinyltransferase YP_393384.1 898934 D 326298 CDS YP_393385.1 78777070 3764143 900236..901063 1 NC_007575.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 901063 ispH 3764143 ispH Sulfurimonas denitrificans DSM 1251 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_393385.1 900236 D 326298 CDS YP_393386.1 78777071 3764144 901203..902858 1 NC_007575.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 902858 rpsA 3764144 rpsA Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S1 YP_393386.1 901203 D 326298 CDS YP_393387.1 78777072 3764145 902864..903343 1 NC_007575.1 hypothetical protein 903343 3764145 Suden_0874 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393387.1 902864 D 326298 CDS YP_393388.1 78777073 3764146 903343..904932 1 NC_007575.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 904932 3764146 Suden_0875 Sulfurimonas denitrificans DSM 1251 D-3-phosphoglycerate dehydrogenase YP_393388.1 903343 D 326298 CDS YP_393389.1 78777074 3764147 complement(905022..906710) 1 NC_007575.1 AcrB/AcrD/AcrF family cation efflux protein 906710 3764147 Suden_0876 Sulfurimonas denitrificans DSM 1251 AcrB/AcrD/AcrF family cation efflux protein YP_393389.1 905022 R 326298 CDS YP_393390.1 78777075 3764148 complement(906710..908296) 1 NC_007575.1 AcrB/AcrD/AcrF family protein 908296 3764148 Suden_0877 Sulfurimonas denitrificans DSM 1251 AcrB/AcrD/AcrF family protein YP_393390.1 906710 R 326298 CDS YP_393391.1 78777076 3764091 complement(908303..909094) 1 NC_007575.1 secretion protein HlyD 909094 3764091 Suden_0878 Sulfurimonas denitrificans DSM 1251 secretion protein HlyD YP_393391.1 908303 R 326298 CDS YP_393392.1 78777077 3764092 complement(909091..910542) 1 NC_007575.1 Outer membrane efflux protein 910542 3764092 Suden_0879 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_393392.1 909091 R 326298 CDS YP_393393.1 78777078 3764093 910730..911143 1 NC_007575.1 hypothetical protein 911143 3764093 Suden_0880 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393393.1 910730 D 326298 CDS YP_393394.1 78777079 3764094 911153..912331 1 NC_007575.1 hypothetical protein 912331 3764094 Suden_0881 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393394.1 911153 D 326298 CDS YP_393395.1 78777080 3764095 912328..913290 1 NC_007575.1 cation efflux system protein 913290 3764095 Suden_0882 Sulfurimonas denitrificans DSM 1251 cation efflux system protein YP_393395.1 912328 D 326298 CDS YP_393396.1 78777081 3764096 913295..916342 1 NC_007575.1 heavy metal efflux pump CzcA 916342 3764096 Suden_0883 Sulfurimonas denitrificans DSM 1251 heavy metal efflux pump CzcA YP_393396.1 913295 D 326298 CDS YP_393397.1 78777082 3764097 916355..917011 1 NC_007575.1 two component transcriptional regulator 917011 3764097 Suden_0884 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393397.1 916355 D 326298 CDS YP_393398.1 78777083 3764098 917139..918134 1 NC_007575.1 histidine kinase 918134 3764098 Suden_0885 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393398.1 917139 D 326298 CDS YP_393399.1 78777084 3764099 complement(918170..919141) 1 NC_007575.1 metal dependent phosphohydrolase 919141 3764099 Suden_0886 Sulfurimonas denitrificans DSM 1251 metal dependent phosphohydrolase YP_393399.1 918170 R 326298 CDS YP_393400.1 78777085 3764100 919230..919550 1 NC_007575.1 hypothetical protein 919550 3764100 Suden_0887 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393400.1 919230 D 326298 CDS YP_393401.1 78777086 3764101 919550..920167 1 NC_007575.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 920167 3764101 Suden_0888 Sulfurimonas denitrificans DSM 1251 pantothenate kinase YP_393401.1 919550 D 326298 CDS YP_393402.1 78777087 3764102 920161..920790 1 NC_007575.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 920790 hisG 3764102 hisG Sulfurimonas denitrificans DSM 1251 ATP phosphoribosyltransferase YP_393402.1 920161 D 326298 CDS YP_393403.1 78777088 3764103 920787..921470 1 NC_007575.1 hypothetical protein 921470 3764103 Suden_0890 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393403.1 920787 D 326298 CDS YP_393404.1 78777089 3764104 complement(921474..922589) 1 NC_007575.1 response regulator receiver sensor signal transduction histidine kinase 922589 3764104 Suden_0891 Sulfurimonas denitrificans DSM 1251 response regulator receiver sensor signal transduction histidine kinase YP_393404.1 921474 R 326298 CDS YP_393405.1 78777090 3764105 922668..923312 1 NC_007575.1 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase 923312 3764105 Suden_0892 Sulfurimonas denitrificans DSM 1251 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase YP_393405.1 922668 D 326298 CDS YP_393406.1 78777091 3764106 923366..923995 1 NC_007575.1 hypothetical protein 923995 3764106 Suden_0893 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393406.1 923366 D 326298 CDS YP_393407.1 78777092 3764107 924078..925127 1 NC_007575.1 NAD-dependent epimerase/dehydratase 925127 3764107 Suden_0894 Sulfurimonas denitrificans DSM 1251 NAD-dependent epimerase/dehydratase YP_393407.1 924078 D 326298 CDS YP_393408.1 78777093 3764108 complement(925139..926062) 1 NC_007575.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 926062 pdxA 3764108 pdxA Sulfurimonas denitrificans DSM 1251 4-hydroxythreonine-4-phosphate dehydrogenase YP_393408.1 925139 R 326298 CDS YP_393409.1 78777094 3764109 complement(926059..926841) 1 NC_007575.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 926841 3764109 Suden_0896 Sulfurimonas denitrificans DSM 1251 pyridoxine 5'-phosphate synthase YP_393409.1 926059 R 326298 CDS YP_393410.1 78777095 3764110 complement(926974..928908) 1 NC_007575.1 hypothetical protein 928908 3764110 Suden_0897 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393410.1 926974 R 326298 CDS YP_393411.1 78777096 3764072 929082..930851 1 NC_007575.1 protein-disulfide reductase 930851 3764072 Suden_0898 Sulfurimonas denitrificans DSM 1251 protein-disulfide reductase YP_393411.1 929082 D 326298 CDS YP_393412.1 78777097 3764073 931158..933437 1 NC_007575.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 933437 3764073 Suden_0899 Sulfurimonas denitrificans DSM 1251 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_393412.1 931158 D 326298 CDS YP_393413.1 78777098 3764074 complement(933484..934236) 1 NC_007575.1 acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 934236 3764074 Suden_0900 Sulfurimonas denitrificans DSM 1251 acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase YP_393413.1 933484 R 326298 CDS YP_393414.1 78777099 3764075 complement(934236..935144) 1 NC_007575.1 oxidoreductase-like 935144 3764075 Suden_0901 Sulfurimonas denitrificans DSM 1251 oxidoreductase-like YP_393414.1 934236 R 326298 CDS YP_393415.1 78777100 3764076 complement(935148..936239) 1 NC_007575.1 DegT/DnrJ/EryC1/StrS aminotransferase 936239 3764076 Suden_0902 Sulfurimonas denitrificans DSM 1251 DegT/DnrJ/EryC1/StrS aminotransferase YP_393415.1 935148 R 326298 CDS YP_393416.1 78777101 3764077 complement(936270..937316) 1 NC_007575.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 937316 lpxB 3764077 lpxB Sulfurimonas denitrificans DSM 1251 ipid-A-disaccharide synthase YP_393416.1 936270 R 326298 CDS YP_393417.1 78777102 3764078 complement(937313..937675) 1 NC_007575.1 cytochrome c, class I 937675 3764078 Suden_0904 Sulfurimonas denitrificans DSM 1251 cytochrome c, class I YP_393417.1 937313 R 326298 CDS YP_393418.1 78777103 3764079 937744..938943 1 NC_007575.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 938943 3764079 Suden_0905 Sulfurimonas denitrificans DSM 1251 dihydroorotase YP_393418.1 937744 D 326298 CDS YP_393419.1 78777104 3764080 938980..939216 1 NC_007575.1 hypothetical protein 939216 3764080 Suden_0906 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393419.1 938980 D 326298 CDS YP_393420.1 78777105 3764081 complement(939234..940352) 1 NC_007575.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 940352 tgt 3764081 tgt Sulfurimonas denitrificans DSM 1251 queuine tRNA-ribosyltransferase YP_393420.1 939234 R 326298 CDS YP_393421.1 78777106 3764082 940681..941247 1 NC_007575.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 941247 3764082 Suden_0908 Sulfurimonas denitrificans DSM 1251 elongation factor P YP_393421.1 940681 D 326298 CDS YP_393422.1 78777107 3764083 941386..943932 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 943932 3764083 Suden_0909 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393422.1 941386 D 326298 CDS YP_393423.1 78777108 3764084 943988..947548 1 NC_007575.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 947548 dnaE 3764084 dnaE Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit alpha YP_393423.1 943988 D 326298 CDS YP_393424.1 78777109 3764085 947558..947869 1 NC_007575.1 hypothetical protein 947869 3764085 Suden_0911 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393424.1 947558 D 326298 CDS YP_393425.1 78777110 3764086 947869..948174 1 NC_007575.1 hypothetical protein 948174 3764086 Suden_0912 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393425.1 947869 D 326298 CDS YP_393426.1 78777111 3764087 948199..949458 1 NC_007575.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 949458 3764087 Suden_0913 Sulfurimonas denitrificans DSM 1251 aminopeptidase 2 YP_393426.1 948199 D 326298 CDS YP_393427.1 78777112 3764088 949458..950441 1 NC_007575.1 histidine kinase 950441 3764088 Suden_0914 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393427.1 949458 D 326298 CDS YP_393428.1 78777113 3764089 950497..950784 1 NC_007575.1 hypothetical protein 950784 3764089 Suden_0915 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393428.1 950497 D 326298 CDS YP_393429.1 78777114 3764090 950861..953986 1 NC_007575.1 cytochrome c assembly protein 953986 3764090 Suden_0916 Sulfurimonas denitrificans DSM 1251 cytochrome c assembly protein YP_393429.1 950861 D 326298 CDS YP_393430.1 78777115 3764033 953998..954699 1 NC_007575.1 hypothetical protein 954699 3764033 Suden_0917 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393430.1 953998 D 326298 CDS YP_393431.1 78777116 3764034 954702..955652 1 NC_007575.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 955652 hemH 3764034 hemH Sulfurimonas denitrificans DSM 1251 ferrochelatase YP_393431.1 954702 D 326298 CDS YP_393432.1 78777117 3764035 955661..956290 1 NC_007575.1 HAD family hydrolase 956290 3764035 Suden_0919 Sulfurimonas denitrificans DSM 1251 HAD family hydrolase YP_393432.1 955661 D 326298 CDS YP_393433.1 78777118 3764036 956335..957579 1 NC_007575.1 hypothetical protein 957579 3764036 Suden_0920 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393433.1 956335 D 326298 CDS YP_393434.1 78777119 3764037 complement(957568..957957) 1 NC_007575.1 hypothetical protein 957957 3764037 Suden_0921 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393434.1 957568 R 326298 CDS YP_393435.1 78777120 3764038 958014..958925 1 NC_007575.1 cation efflux protein 958925 3764038 Suden_0922 Sulfurimonas denitrificans DSM 1251 cation efflux protein YP_393435.1 958014 D 326298 CDS YP_393436.1 78777121 3764039 959017..959763 1 NC_007575.1 molybdenum ABC transporter periplasmic-binding protein 959763 3764039 Suden_0923 Sulfurimonas denitrificans DSM 1251 molybdenum ABC transporter periplasmic-binding protein YP_393436.1 959017 D 326298 CDS YP_393437.1 78777122 3764040 959760..960164 1 NC_007575.1 hypothetical protein 960164 3764040 Suden_0924 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393437.1 959760 D 326298 CDS YP_393438.1 78777123 3764041 960184..960864 1 NC_007575.1 molybdate ABC transporter permease 960864 3764041 Suden_0925 Sulfurimonas denitrificans DSM 1251 molybdate ABC transporter permease YP_393438.1 960184 D 326298 CDS YP_393439.1 78777124 3764042 960861..961733 1 NC_007575.1 ABC transporter-like protein 961733 3764042 Suden_0926 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393439.1 960861 D 326298 CDS YP_393440.1 78777125 3764043 961873..965619 1 NC_007575.1 hypothetical protein 965619 3764043 Suden_0927 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393440.1 961873 D 326298 CDS YP_393441.1 78777126 3764044 965616..966911 1 NC_007575.1 calcium-binding EF-hand 966911 3764044 Suden_0928 Sulfurimonas denitrificans DSM 1251 calcium-binding EF-hand YP_393441.1 965616 D 326298 CDS YP_393442.1 78777127 3764045 966916..969132 1 NC_007575.1 guanylate cyclase 969132 3764045 Suden_0929 Sulfurimonas denitrificans DSM 1251 guanylate cyclase YP_393442.1 966916 D 326298 CDS YP_393443.1 78777128 3764046 969134..971524 1 NC_007575.1 metal dependent phosphohydrolase 971524 3764046 Suden_0930 Sulfurimonas denitrificans DSM 1251 metal dependent phosphohydrolase YP_393443.1 969134 D 326298 CDS YP_393444.1 78777129 3764047 971671..971937 1 NC_007575.1 hypothetical protein 971937 3764047 Suden_0931 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393444.1 971671 D 326298 CDS YP_393445.1 78777130 3764048 971942..973486 1 NC_007575.1 hypothetical protein 973486 3764048 Suden_0932 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393445.1 971942 D 326298 CDS YP_393446.1 78777131 3764049 973559..974983 1 NC_007575.1 phytoene dehydrogenase 974983 3764049 Suden_0933 Sulfurimonas denitrificans DSM 1251 phytoene dehydrogenase YP_393446.1 973559 D 326298 CDS YP_393447.1 78777132 3764050 974976..975986 1 NC_007575.1 histidine kinase internal region 975986 3764050 Suden_0934 Sulfurimonas denitrificans DSM 1251 histidine kinase internal region YP_393447.1 974976 D 326298 CDS YP_393448.1 78777133 3764051 975967..976665 1 NC_007575.1 LytR/AlgR family transcriptional regulator 976665 3764051 Suden_0935 Sulfurimonas denitrificans DSM 1251 LytR/AlgR family transcriptional regulator YP_393448.1 975967 D 326298 CDS YP_393449.1 78777134 3764052 977061..977537 1 NC_007575.1 hypothetical protein 977537 3764052 Suden_0936 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393449.1 977061 D 326298 CDS YP_393450.1 78777135 3763956 977588..977857 1 NC_007575.1 hypothetical protein 977857 3763956 Suden_0937 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393450.1 977588 D 326298 CDS YP_393451.1 78777136 3763957 977850..979031 1 NC_007575.1 Phage integrase 979031 3763957 Suden_0938 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_393451.1 977850 D 326298 CDS YP_393452.1 78777137 3763958 979298..980881 1 NC_007575.1 HipA-like protein 980881 3763958 Suden_0939 Sulfurimonas denitrificans DSM 1251 HipA-like protein YP_393452.1 979298 D 326298 CDS YP_393453.1 78777138 3763959 980976..981194 1 NC_007575.1 hypothetical protein 981194 3763959 Suden_0940 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393453.1 980976 D 326298 CDS YP_393454.1 78777139 3763960 981311..981898 1 NC_007575.1 restriction modification system DNA specificity subunit 981898 3763960 Suden_0941 Sulfurimonas denitrificans DSM 1251 restriction modification system DNA specificity subunit YP_393454.1 981311 D 326298 CDS YP_393455.1 78777140 3763961 981903..983390 1 NC_007575.1 Type I restriction-modification system M subunit 983390 3763961 Suden_0942 Sulfurimonas denitrificans DSM 1251 Type I restriction-modification system M subunit YP_393455.1 981903 D 326298 CDS YP_393456.1 78777141 3763962 983392..984237 1 NC_007575.1 DNA-damage-inducible protein D 984237 dinD 3763962 dinD Sulfurimonas denitrificans DSM 1251 DNA-damage-inducible protein D YP_393456.1 983392 D 326298 CDS YP_393457.1 78777142 3763963 984234..985496 1 NC_007575.1 restriction modification system DNA specificity subunit 985496 3763963 Suden_0944 Sulfurimonas denitrificans DSM 1251 restriction modification system DNA specificity subunit YP_393457.1 984234 D 326298 CDS YP_393458.1 78777143 3763964 985493..986764 1 NC_007575.1 hypothetical protein 986764 3763964 Suden_0945 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393458.1 985493 D 326298 CDS YP_393459.1 78777144 3763965 986764..987309 1 NC_007575.1 hypothetical protein 987309 3763965 Suden_0946 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393459.1 986764 D 326298 CDS YP_393460.1 78777145 3763966 987320..988660 1 NC_007575.1 transcriptional regulator 988660 3763966 Suden_0947 Sulfurimonas denitrificans DSM 1251 transcriptional regulator YP_393460.1 987320 D 326298 CDS YP_393461.1 78777146 3763967 988657..991749 1 NC_007575.1 type I topoisomerase 991749 3763967 Suden_0948 Sulfurimonas denitrificans DSM 1251 type I topoisomerase YP_393461.1 988657 D 326298 CDS YP_393462.1 78777147 3763968 991742..992401 1 NC_007575.1 hypothetical protein 992401 3763968 Suden_0949 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393462.1 991742 D 326298 CDS YP_393463.1 78777148 3763969 complement(992721..993662) 1 NC_007575.1 hypothetical protein 993662 3763969 Suden_0950 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393463.1 992721 R 326298 CDS YP_393464.1 78777149 3763970 994232..995038 1 NC_007575.1 Beta-lactamase 995038 3763970 Suden_0951 Sulfurimonas denitrificans DSM 1251 Beta-lactamase YP_393464.1 994232 D 326298 CDS YP_393465.1 78777150 3763971 complement(995033..995380) 1 NC_007575.1 hypothetical protein 995380 3763971 Suden_0952 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393465.1 995033 R 326298 CDS YP_393466.1 78777151 3763972 complement(995381..995788) 1 NC_007575.1 hypothetical protein 995788 3763972 Suden_0953 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393466.1 995381 R 326298 CDS YP_393467.1 78777152 3763973 complement(995781..996302) 1 NC_007575.1 hypothetical protein 996302 3763973 Suden_0954 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393467.1 995781 R 326298 CDS YP_393468.1 78777153 3763974 complement(996583..997281) 1 NC_007575.1 XRE family transcriptional regulator 997281 3763974 Suden_0955 Sulfurimonas denitrificans DSM 1251 XRE family transcriptional regulator YP_393468.1 996583 R 326298 CDS YP_393469.1 78777154 3763936 997425..998102 1 NC_007575.1 hypothetical protein 998102 3763936 Suden_0956 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393469.1 997425 D 326298 CDS YP_393470.1 78777155 3763937 998114..999523 1 NC_007575.1 DnaB-like protein helicase-like protein 999523 3763937 Suden_0957 Sulfurimonas denitrificans DSM 1251 DnaB-like protein helicase-like protein YP_393470.1 998114 D 326298 CDS YP_393471.1 78777156 3763938 999596..999958 1 NC_007575.1 hypothetical protein 999958 3763938 Suden_0958 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393471.1 999596 D 326298 CDS YP_393472.1 78777157 3763939 999955..1001133 1 NC_007575.1 Phage integrase 1001133 3763939 Suden_0959 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_393472.1 999955 D 326298 CDS YP_393473.1 78777158 3763940 1001167..1001547 1 NC_007575.1 4-hydroxybenzoyl-CoA thioesterase 1001547 3763940 Suden_0960 Sulfurimonas denitrificans DSM 1251 4-hydroxybenzoyl-CoA thioesterase YP_393473.1 1001167 D 326298 CDS YP_393474.1 78777159 3763941 complement(1001544..1002764) 1 NC_007575.1 hypothetical protein 1002764 3763941 Suden_0961 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393474.1 1001544 R 326298 CDS YP_393475.1 78777160 3763942 1002921..1004657 1 NC_007575.1 Na+/Pi-cotransporter 1004657 3763942 Suden_0962 Sulfurimonas denitrificans DSM 1251 Na+/Pi-cotransporter YP_393475.1 1002921 D 326298 CDS YP_393476.1 78777161 3763943 complement(1004716..1005375) 1 NC_007575.1 uracil-DNA glycosylase 1005375 3763943 Suden_0963 Sulfurimonas denitrificans DSM 1251 uracil-DNA glycosylase YP_393476.1 1004716 R 326298 CDS YP_393477.1 78777162 3763944 1005476..1006252 1 NC_007575.1 two component transcriptional regulator 1006252 3763944 Suden_0964 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393477.1 1005476 D 326298 CDS YP_393478.1 78777163 3763945 1006354..1008585 1 NC_007575.1 Cache sensor signal transduction histidine kinase 1008585 3763945 Suden_0965 Sulfurimonas denitrificans DSM 1251 Cache sensor signal transduction histidine kinase YP_393478.1 1006354 D 326298 CDS YP_393479.1 78777164 3763946 1008578..1010248 1 NC_007575.1 multi-sensor signal transduction histidine kinase 1010248 3763946 Suden_0966 Sulfurimonas denitrificans DSM 1251 multi-sensor signal transduction histidine kinase YP_393479.1 1008578 D 326298 CDS YP_393480.1 78777165 3763947 1010370..1013384 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 1013384 3763947 Suden_0967 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393480.1 1010370 D 326298 CDS YP_393481.1 78777166 3763948 1013544..1014497 1 NC_007575.1 response regulator receiver domain-containing protein 1014497 3763948 Suden_0968 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393481.1 1013544 D 326298 CDS YP_393482.1 78777167 3763949 1014508..1015494 1 NC_007575.1 response regulator receiver domain-containing protein 1015494 3763949 Suden_0969 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393482.1 1014508 D 326298 CDS YP_393483.1 78777168 3763950 1015533..1015919 1 NC_007575.1 response regulator receiver domain-containing protein 1015919 3763950 Suden_0970 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393483.1 1015533 D 326298 CDS YP_393484.1 78777169 3763951 1015921..1016430 1 NC_007575.1 chemotaxis protein CheW 1016430 3763951 Suden_0971 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheW YP_393484.1 1015921 D 326298 CDS YP_393485.1 78777170 3763952 1016447..1018054 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1018054 3763952 Suden_0972 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393485.1 1016447 D 326298 CDS YP_393486.1 78777171 3763953 1018057..1018320 1 NC_007575.1 hypothetical protein 1018320 3763953 Suden_0973 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393486.1 1018057 D 326298 CDS YP_393487.1 78777172 3763954 1018324..1020399 1 NC_007575.1 CheA signal transduction histidine kinase 1020399 3763954 Suden_0974 Sulfurimonas denitrificans DSM 1251 CheA signal transduction histidine kinase YP_393487.1 1018324 D 326298 CDS YP_393488.1 78777173 3763955 1020396..1021241 1 NC_007575.1 chemotaxis protein CheR 1021241 3763955 Suden_0975 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheR YP_393488.1 1020396 D 326298 CDS YP_393489.1 78777174 3764014 1021254..1022138 1 NC_007575.1 histidine kinase 1022138 3764014 Suden_0976 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393489.1 1021254 D 326298 CDS YP_393490.1 78777175 3764015 1022141..1022611 1 NC_007575.1 chemotaxis protein CheD 1022611 3764015 Suden_0977 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheD YP_393490.1 1022141 D 326298 CDS YP_393491.1 78777176 3764016 1022622..1023680 1 NC_007575.1 response regulator receiver (CheY-like) modulated CheB methylesterase 1023680 3764016 Suden_0978 Sulfurimonas denitrificans DSM 1251 response regulator receiver (CheY-like) modulated CheB methylesterase YP_393491.1 1022622 D 326298 CDS YP_393492.1 78777177 3764017 1023686..1025749 1 NC_007575.1 histidine kinase 1025749 3764017 Suden_0979 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393492.1 1023686 D 326298 CDS YP_393493.1 78777178 3764018 1025845..1026441 1 NC_007575.1 hypothetical protein 1026441 3764018 Suden_0980 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393493.1 1025845 D 326298 CDS YP_393494.1 78777179 3764019 1026451..1028358 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1028358 3764019 Suden_0981 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393494.1 1026451 D 326298 CDS YP_393495.1 78777180 3764020 1028351..1029484 1 NC_007575.1 response regulator receiver sensor signal transduction histidine kinase 1029484 3764020 Suden_0982 Sulfurimonas denitrificans DSM 1251 response regulator receiver sensor signal transduction histidine kinase YP_393495.1 1028351 D 326298 CDS YP_393496.1 78777181 3764021 1029555..1031717 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1031717 3764021 Suden_0983 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393496.1 1029555 D 326298 CDS YP_393497.1 78777182 3764022 1031730..1033424 1 NC_007575.1 response regulator receiver/GGDEF/EAL domain-containing protein 1033424 3764022 Suden_0984 Sulfurimonas denitrificans DSM 1251 response regulator receiver/GGDEF/EAL domain-containing protein YP_393497.1 1031730 D 326298 CDS YP_393498.1 78777183 3764023 1033438..1034622 1 NC_007575.1 histidine kinase 1034622 3764023 Suden_0985 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393498.1 1033438 D 326298 CDS YP_393499.1 78777184 3764024 1034626..1036089 1 NC_007575.1 multi-sensor signal transduction histidine kinase 1036089 3764024 Suden_0986 Sulfurimonas denitrificans DSM 1251 multi-sensor signal transduction histidine kinase YP_393499.1 1034626 D 326298 CDS YP_393500.1 78777185 3764025 1036103..1037365 1 NC_007575.1 response regulator receiver domain-containing protein 1037365 3764025 Suden_0987 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393500.1 1036103 D 326298 CDS YP_393501.1 78777186 3764026 complement(1037393..1039351) 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1039351 3764026 Suden_0988 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393501.1 1037393 R 326298 CDS YP_393502.1 78777187 3764027 1039923..1042085 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1042085 3764027 Suden_0989 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393502.1 1039923 D 326298 CDS YP_393503.1 78777188 3764028 complement(1042136..1042522) 1 NC_007575.1 hypothetical protein 1042522 3764028 Suden_0990 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393503.1 1042136 R 326298 CDS YP_393504.1 78777189 3764029 1042691..1044712 1 NC_007575.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1044712 glyS 3764029 glyS Sulfurimonas denitrificans DSM 1251 glycyl-tRNA synthetase subunit beta YP_393504.1 1042691 D 326298 CDS YP_393505.1 78777190 3764030 complement(1044718..1045452) 1 NC_007575.1 hypothetical protein 1045452 3764030 Suden_0992 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393505.1 1044718 R 326298 CDS YP_393506.1 78777191 3764031 complement(1045528..1045989) 1 NC_007575.1 globin 1045989 3764031 Suden_0993 Sulfurimonas denitrificans DSM 1251 globin YP_393506.1 1045528 R 326298 CDS YP_393507.1 78777192 3764032 complement(1046036..1046746) 1 NC_007575.1 pseudouridylate synthase 1046746 3764032 Suden_0994 Sulfurimonas denitrificans DSM 1251 pseudouridylate synthase YP_393507.1 1046036 R 326298 CDS YP_393508.1 78777193 3763897 complement(1046747..1047766) 1 NC_007575.1 permease YjgP/YjgQ 1047766 3763897 Suden_0995 Sulfurimonas denitrificans DSM 1251 permease YjgP/YjgQ YP_393508.1 1046747 R 326298 CDS YP_393509.1 78777194 3763898 complement(1047766..1048581) 1 NC_007575.1 peptidase A24A-like protein 1048581 3763898 Suden_0996 Sulfurimonas denitrificans DSM 1251 peptidase A24A-like protein YP_393509.1 1047766 R 326298 CDS YP_393510.1 78777195 3763899 complement(1048581..1049258) 1 NC_007575.1 di-trans-poly-cis-decaprenylcistransferase 1049258 3763899 Suden_0997 Sulfurimonas denitrificans DSM 1251 di-trans-poly-cis-decaprenylcistransferase YP_393510.1 1048581 R 326298 CDS YP_393511.1 78777196 3763900 complement(1049255..1050523) 1 NC_007575.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1050523 3763900 Suden_0998 Sulfurimonas denitrificans DSM 1251 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_393511.1 1049255 R 326298 CDS YP_393512.1 78777197 3763901 1050690..1051796 1 NC_007575.1 hypothetical protein 1051796 3763901 Suden_0999 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393512.1 1050690 D 326298 CDS YP_393513.1 78777198 3763902 complement(1051804..1052094) 1 NC_007575.1 Zinc finger, CDGSH-type 1052094 3763902 Suden_1000 Sulfurimonas denitrificans DSM 1251 Zinc finger, CDGSH-type YP_393513.1 1051804 R 326298 CDS YP_393514.1 78777199 3763903 1052195..1052749 1 NC_007575.1 hypothetical protein 1052749 3763903 Suden_1001 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393514.1 1052195 D 326298 CDS YP_393515.1 78777200 3763904 1052933..1053364 1 NC_007575.1 MotA/TolQ/ExbB proton channel 1053364 3763904 Suden_1002 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_393515.1 1052933 D 326298 CDS YP_393516.1 78777201 3763905 1053342..1053719 1 NC_007575.1 biopolymer transport protein ExbD/TolR 1053719 3763905 Suden_1003 Sulfurimonas denitrificans DSM 1251 biopolymer transport protein ExbD/TolR YP_393516.1 1053342 D 326298 CDS YP_393517.1 78777202 3763906 1053854..1054573 1 NC_007575.1 TonB-like protein 1054573 3763906 Suden_1004 Sulfurimonas denitrificans DSM 1251 TonB-like protein YP_393517.1 1053854 D 326298 CDS YP_393518.1 78777203 3763907 1054732..1056831 1 NC_007575.1 TonB-dependent receptor 1056831 3763907 Suden_1005 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_393518.1 1054732 D 326298 CDS YP_393519.1 78777204 3763908 1056955..1058235 1 NC_007575.1 TonB-dependent receptor 1058235 3763908 Suden_1006 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_393519.1 1056955 D 326298 CDS YP_393520.1 78777205 3763909 complement(1058560..1060263) 1 NC_007575.1 hemolysin activation/secretion protein-like protein 1060263 3763909 Suden_1007 Sulfurimonas denitrificans DSM 1251 hemolysin activation/secretion protein-like protein YP_393520.1 1058560 R 326298 CDS YP_393521.1 78777206 3763910 complement(1060275..1063316) 1 NC_007575.1 GLUG 1063316 3763910 Suden_1008 Sulfurimonas denitrificans DSM 1251 GLUG YP_393521.1 1060275 R 326298 CDS YP_393522.1 78777207 3763911 complement(1063306..1063674) 1 NC_007575.1 hypothetical protein 1063674 3763911 Suden_1009 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393522.1 1063306 R 326298 CDS YP_393523.1 78777208 3763912 complement(1063760..1065640) 1 NC_007575.1 signal transduction histidine kinase 1065640 3763912 Suden_1010 Sulfurimonas denitrificans DSM 1251 signal transduction histidine kinase YP_393523.1 1063760 R 326298 CDS YP_393524.1 78777209 3763913 complement(1065640..1065948) 1 NC_007575.1 response regulator receiver domain-containing protein 1065948 3763913 Suden_1011 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393524.1 1065640 R 326298 CDS YP_393525.1 78777210 3763914 complement(1065960..1066289) 1 NC_007575.1 response regulator receiver domain-containing protein 1066289 3763914 Suden_1012 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393525.1 1065960 R 326298 CDS YP_393526.1 78777211 3763915 complement(1066828..1067160) 1 NC_007575.1 hypothetical protein 1067160 3763915 Suden_1013 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393526.1 1066828 R 326298 CDS YP_393527.1 78777212 3763916 complement(1067454..1068758) 1 NC_007575.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1068758 glmU 3763916 glmU Sulfurimonas denitrificans DSM 1251 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_393527.1 1067454 R 326298 CDS YP_393528.1 78777213 3763995 1068900..1069664 1 NC_007575.1 MotA/TolQ/ExbB proton channel 1069664 3763995 Suden_1015 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_393528.1 1068900 D 326298 CDS YP_393529.1 78777214 3763996 1069733..1070455 1 NC_007575.1 OmpA/MotB protein 1070455 3763996 Suden_1016 Sulfurimonas denitrificans DSM 1251 OmpA/MotB protein YP_393529.1 1069733 D 326298 CDS YP_393530.1 78777215 3763997 1070455..1071195 1 NC_007575.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1071195 fliP 3763997 fliP Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis protein FliP YP_393530.1 1070455 D 326298 CDS YP_393531.1 78777216 3763998 1071210..1072319 1 NC_007575.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 1072319 3763998 Suden_1018 Sulfurimonas denitrificans DSM 1251 tRNA (uracil-5-)-methyltransferase YP_393531.1 1071210 D 326298 CDS YP_393532.1 78777217 3763999 1072367..1073773 1 NC_007575.1 hypothetical protein 1073773 3763999 Suden_1019 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393532.1 1072367 D 326298 CDS YP_393533.1 78777218 3764000 1073850..1074899 1 NC_007575.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1074899 aroB 3764000 aroB Sulfurimonas denitrificans DSM 1251 3-dehydroquinate synthase YP_393533.1 1073850 D 326298 CDS YP_393534.1 78777219 3764001 1074900..1076546 1 NC_007575.1 MscS mechanosensitive ion channel 1076546 3764001 Suden_1021 Sulfurimonas denitrificans DSM 1251 MscS mechanosensitive ion channel YP_393534.1 1074900 D 326298 CDS YP_393535.1 78777220 3764002 1076547..1077794 1 NC_007575.1 MiaB-like tRNA modifying enzyme 1077794 3764002 Suden_1022 Sulfurimonas denitrificans DSM 1251 MiaB-like tRNA modifying enzyme YP_393535.1 1076547 D 326298 CDS YP_393536.1 78777221 3764003 1077781..1079424 1 NC_007575.1 peptidase M41 1079424 3764003 Suden_1023 Sulfurimonas denitrificans DSM 1251 peptidase M41 YP_393536.1 1077781 D 326298 CDS YP_393537.1 78777222 3764004 1079411..1079932 1 NC_007575.1 hypothetical protein 1079932 3764004 Suden_1024 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393537.1 1079411 D 326298 CDS YP_393538.1 78777223 3764005 1079942..1080472 1 NC_007575.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 1080472 mogA 3764005 mogA Sulfurimonas denitrificans DSM 1251 molybdenum cofactor biosynthesis protein MogA YP_393538.1 1079942 D 326298 CDS YP_393539.1 78777224 3764006 complement(1080529..1081749) 1 NC_007575.1 periplasmic copper-binding protein 1081749 3764006 Suden_1026 Sulfurimonas denitrificans DSM 1251 periplasmic copper-binding protein YP_393539.1 1080529 R 326298 CDS YP_393540.1 78777225 3764007 complement(1081947..1082450) 1 NC_007575.1 hypothetical protein 1082450 3764007 Suden_1027 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393540.1 1081947 R 326298 CDS YP_393541.1 78777226 3764008 complement(1082756..1083637) 1 NC_007575.1 succinate dehydrogenase/fumarate reductase subunit C 1083637 3764008 Suden_1028 Sulfurimonas denitrificans DSM 1251 succinate dehydrogenase/fumarate reductase subunit C YP_393541.1 1082756 R 326298 CDS YP_393542.1 78777227 3764009 complement(1083649..1084626) 1 NC_007575.1 succinate dehydrogenase/fumarate reductase subunit B 1084626 3764009 Suden_1029 Sulfurimonas denitrificans DSM 1251 succinate dehydrogenase/fumarate reductase subunit B YP_393542.1 1083649 R 326298 CDS YP_393543.1 78777228 3764010 complement(1084636..1086348) 1 NC_007575.1 succinate dehydrogenase/fumarate reductase subunit A 1086348 3764010 Suden_1030 Sulfurimonas denitrificans DSM 1251 succinate dehydrogenase/fumarate reductase subunit A YP_393543.1 1084636 R 326298 CDS YP_393544.1 78777229 3764011 1086706..1087533 1 NC_007575.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1087533 3764011 Suden_1031 Sulfurimonas denitrificans DSM 1251 thiamine monophosphate kinase YP_393544.1 1086706 D 326298 CDS YP_393545.1 78777230 3764012 1087552..1088625 1 NC_007575.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 1088625 truD 3764012 truD Sulfurimonas denitrificans DSM 1251 tRNA pseudouridine synthase D YP_393545.1 1087552 D 326298 CDS YP_393546.1 78777231 3764013 1088650..1089468 1 NC_007575.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1089468 3764013 Suden_1033 Sulfurimonas denitrificans DSM 1251 phosphatidylserine decarboxylase YP_393546.1 1088650 D 326298 CDS YP_393547.1 78777232 3763917 1089539..1089901 1 NC_007575.1 response regulator receiver domain-containing protein 1089901 3763917 Suden_1034 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393547.1 1089539 D 326298 CDS YP_393548.1 78777233 3763918 1089913..1090527 1 NC_007575.1 chemotaxis protein CheC 1090527 3763918 Suden_1035 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheC YP_393548.1 1089913 D 326298 CDS YP_393549.1 78777234 3763919 1090524..1091807 1 NC_007575.1 diguanylate cyclase 1091807 3763919 Suden_1036 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393549.1 1090524 D 326298 CDS YP_393550.1 78777235 3763921 1092096..1094201 1 NC_007575.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 1094201 flgL 3763921 flgL Sulfurimonas denitrificans DSM 1251 flagellar hook-associated protein FlgL YP_393550.1 1092096 D 326298 CDS YP_393551.1 78777236 3763922 1094287..1096506 1 NC_007575.1 DNA translocase FtsK 1096506 3763922 Suden_1038 Sulfurimonas denitrificans DSM 1251 DNA translocase FtsK YP_393551.1 1094287 D 326298 CDS YP_393552.1 78777237 3763923 1096506..1096898 1 NC_007575.1 hypothetical protein 1096898 3763923 Suden_1039 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393552.1 1096506 D 326298 CDS YP_393553.1 78777238 3763924 1097022..1099568 1 NC_007575.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1099568 3763924 Suden_1040 Sulfurimonas denitrificans DSM 1251 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_393553.1 1097022 D 326298 CDS YP_393554.1 78777239 3763925 1099694..1102069 1 NC_007575.1 diguanylate cyclase 1102069 3763925 Suden_1041 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393554.1 1099694 D 326298 CDS YP_393555.1 78777240 3763926 complement(1102059..1102574) 1 NC_007575.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1102574 lolA 3763926 lolA Sulfurimonas denitrificans DSM 1251 outer-membrane lipoprotein carrier protein YP_393555.1 1102059 R 326298 CDS YP_393556.1 78777241 3763927 1102751..1105324 1 NC_007575.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1105324 secA 3763927 secA Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecA YP_393556.1 1102751 D 326298 CDS YP_393557.1 78777242 3763928 1105321..1106523 1 NC_007575.1 hypothetical protein 1106523 3763928 Suden_1044 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393557.1 1105321 D 326298 CDS YP_393558.1 78777243 3763929 complement(1106526..1109291) 1 NC_007575.1 hypothetical protein 1109291 3763929 Suden_1045 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393558.1 1106526 R 326298 CDS YP_393559.1 78777244 3763930 1109527..1110567 1 NC_007575.1 aminodeoxychorismate lyase 1110567 3763930 Suden_1046 Sulfurimonas denitrificans DSM 1251 aminodeoxychorismate lyase YP_393559.1 1109527 D 326298 CDS YP_393560.1 78777245 3763931 1110707..1112896 1 NC_007575.1 isocitrate dehydrogenase 1112896 3763931 Suden_1047 Sulfurimonas denitrificans DSM 1251 isocitrate dehydrogenase YP_393560.1 1110707 D 326298 CDS YP_393561.1 78777246 3763932 1113044..1114003 1 NC_007575.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 1114003 3763932 Suden_1048 Sulfurimonas denitrificans DSM 1251 malate dehydrogenase YP_393561.1 1113044 D 326298 CDS YP_393562.1 78777247 3763933 1114008..1115399 1 NC_007575.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1115399 fumC 3763933 fumC Sulfurimonas denitrificans DSM 1251 fumarate hydratase YP_393562.1 1114008 D 326298 CDS YP_393563.1 78777248 3763934 1115421..1116596 1 NC_007575.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1116596 sucC 3763934 sucC Sulfurimonas denitrificans DSM 1251 succinyl-CoA synthetase subunit beta YP_393563.1 1115421 D 326298 CDS YP_393564.1 78777249 3763935 1116610..1117482 1 NC_007575.1 succinyl-CoA synthetase subunit alpha 1117482 3763935 Suden_1051 Sulfurimonas denitrificans DSM 1251 succinyl-CoA synthetase subunit alpha YP_393564.1 1116610 D 326298 CDS YP_393565.1 78777250 3763807 1117673..1118008 1 NC_007575.1 2-oxoglutarate-acceptor oxidoreductase subunit OorD 1118008 oorD 3763807 oorD Sulfurimonas denitrificans DSM 1251 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_393565.1 1117673 D 326298 CDS YP_393566.1 78777251 3763808 1118008..1119141 1 NC_007575.1 2-oxoglutarate-acceptor oxidoreductase subunit OorA 1119141 oorA 3763808 oorA Sulfurimonas denitrificans DSM 1251 2-oxoglutarate-acceptor oxidoreductase subunit OorA YP_393566.1 1118008 D 326298 CDS YP_393567.1 78777252 3763809 1119143..1120000 1 NC_007575.1 2-oxoglutarate-acceptor oxidoreductase subunit OorB 1120000 oorB 3763809 oorB Sulfurimonas denitrificans DSM 1251 2-oxoglutarate-acceptor oxidoreductase subunit OorB YP_393567.1 1119143 D 326298 CDS YP_393568.1 78777253 3763810 1120012..1120566 1 NC_007575.1 2-oxoglutarate-acceptor oxidoreductase subunit OorC 1120566 oorC 3763810 oorC Sulfurimonas denitrificans DSM 1251 2-oxoglutarate-acceptor oxidoreductase subunit OorC YP_393568.1 1120012 D 326298 CDS YP_393569.1 78777254 3763811 complement(1120643..1121260) 1 NC_007575.1 TetR family transcriptional regulator 1121260 3763811 Suden_1056 Sulfurimonas denitrificans DSM 1251 TetR family transcriptional regulator YP_393569.1 1120643 R 326298 CDS YP_393570.1 78777255 3763813 1121981..1122238 1 NC_007575.1 hypothetical protein 1122238 3763813 Suden_1057 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393570.1 1121981 D 326298 CDS YP_393571.1 78777256 3763814 1122665..1123210 1 NC_007575.1 response regulator receiver domain-containing protein 1123210 3763814 Suden_1058 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_393571.1 1122665 D 326298 CDS YP_393572.1 78777257 3763816 1123630..1124928 1 NC_007575.1 charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 1124928 3763816 Suden_1059 Sulfurimonas denitrificans DSM 1251 glutamylglutaminyl-tRNA synthetase YP_393572.1 1123630 D 326298 CDS YP_393573.1 78777258 3763817 1124925..1125209 1 NC_007575.1 hypothetical protein 1125209 3763817 Suden_1060 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393573.1 1124925 D 326298 CDS YP_393574.1 78777259 3763818 complement(1125216..1125707) 1 NC_007575.1 hypothetical protein 1125707 3763818 Suden_1061 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393574.1 1125216 R 326298 CDS YP_393575.1 78777260 3763819 1125804..1126307 1 NC_007575.1 molybdopterin-guanine dinucleotide biosynthesis MobB region 1126307 3763819 Suden_1062 Sulfurimonas denitrificans DSM 1251 molybdopterin-guanine dinucleotide biosynthesis MobB region YP_393575.1 1125804 D 326298 CDS YP_393576.1 78777261 3763820 1126312..1127154 1 NC_007575.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1127154 3763820 Suden_1063 Sulfurimonas denitrificans DSM 1251 fructose-1,6-bisphosphatase YP_393576.1 1126312 D 326298 CDS YP_393577.1 78777262 3763821 1127138..1127344 1 NC_007575.1 hypothetical protein 1127344 3763821 Suden_1064 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393577.1 1127138 D 326298 CDS YP_393578.1 78777263 3763822 1127367..1129301 1 NC_007575.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1129301 3763822 Suden_1065 Sulfurimonas denitrificans DSM 1251 methionyl-tRNA synthetase YP_393578.1 1127367 D 326298 CDS YP_393579.1 78777264 3763823 1129298..1130293 1 NC_007575.1 hypothetical protein 1130293 3763823 Suden_1066 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393579.1 1129298 D 326298 CDS YP_393580.1 78777265 3763768 1130304..1131437 1 NC_007575.1 twin-arginine translocation pathway signal 1131437 3763768 Suden_1067 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_393580.1 1130304 D 326298 CDS YP_393581.1 78777266 3763769 1131459..1132691 1 NC_007575.1 hypothetical protein 1132691 3763769 Suden_1068 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393581.1 1131459 D 326298 CDS YP_393582.1 78777267 3763770 complement(1132669..1133346) 1 NC_007575.1 hypothetical protein 1133346 3763770 Suden_1069 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393582.1 1132669 R 326298 CDS YP_393583.1 78777268 3763771 complement(1133318..1133992) 1 NC_007575.1 exoenzyme S synthesis protein B 1133992 3763771 Suden_1070 Sulfurimonas denitrificans DSM 1251 exoenzyme S synthesis protein B YP_393583.1 1133318 R 326298 CDS YP_393584.1 78777269 3763772 1134272..1134691 1 NC_007575.1 metalloprotease 1134691 3763772 Suden_1071 Sulfurimonas denitrificans DSM 1251 metalloprotease YP_393584.1 1134272 D 326298 CDS YP_393585.1 78777270 3763773 1134698..1135624 1 NC_007575.1 K+-dependent Na+/Ca+ exchanger-like protein 1135624 3763773 Suden_1072 Sulfurimonas denitrificans DSM 1251 K+-dependent Na+/Ca+ exchanger-like protein YP_393585.1 1134698 D 326298 CDS YP_393586.1 78777271 3763774 complement(1135661..1137475) 1 NC_007575.1 peptidoglycan glycosyltransferase 1137475 3763774 Suden_1073 Sulfurimonas denitrificans DSM 1251 peptidoglycan glycosyltransferase YP_393586.1 1135661 R 326298 CDS YP_393587.1 78777272 3763775 complement(1137472..1137870) 1 NC_007575.1 hypothetical protein 1137870 3763775 Suden_1074 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393587.1 1137472 R 326298 CDS YP_393588.1 78777273 3763776 complement(1137891..1138352) 1 NC_007575.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 1138352 3763776 Suden_1075 Sulfurimonas denitrificans DSM 1251 acetyltransferase YP_393588.1 1137891 R 326298 CDS YP_393589.1 78777274 3763777 complement(1138342..1138959) 1 NC_007575.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1138959 engB 3763777 engB Sulfurimonas denitrificans DSM 1251 ribosome biogenesis GTP-binding protein YsxC YP_393589.1 1138342 R 326298 CDS YP_393590.1 78777275 3763778 complement(1138952..1139452) 1 NC_007575.1 OstA-like protein 1139452 3763778 Suden_1077 Sulfurimonas denitrificans DSM 1251 OstA-like protein YP_393590.1 1138952 R 326298 CDS YP_393591.1 78777276 3763779 complement(1139453..1139968) 1 NC_007575.1 hypothetical protein 1139968 3763779 Suden_1078 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393591.1 1139453 R 326298 CDS YP_393592.1 78777277 3763780 complement(1139974..1140453) 1 NC_007575.1 phosphatase kdsC 1140453 3763780 Suden_1079 Sulfurimonas denitrificans DSM 1251 phosphatase kdsC YP_393592.1 1139974 R 326298 CDS YP_393593.1 78777278 3763781 complement(1140465..1141037) 1 NC_007575.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1141037 hisB 3763781 hisB Sulfurimonas denitrificans DSM 1251 imidazoleglycerol-phosphate dehydratase YP_393593.1 1140465 R 326298 CDS YP_393594.1 78777279 3763782 complement(1141039..1141851) 1 NC_007575.1 rare lipoprotein A 1141851 3763782 Suden_1081 Sulfurimonas denitrificans DSM 1251 rare lipoprotein A YP_393594.1 1141039 R 326298 CDS YP_393595.1 78777280 3763783 complement(1141874..1143013) 1 NC_007575.1 lytic transglycosylase, catalytic 1143013 3763783 Suden_1082 Sulfurimonas denitrificans DSM 1251 lytic transglycosylase, catalytic YP_393595.1 1141874 R 326298 CDS YP_393596.1 78777281 3763784 complement(1143107..1143883) 1 NC_007575.1 TatD-related deoxyribonuclease 1143883 3763784 Suden_1083 Sulfurimonas denitrificans DSM 1251 TatD-related deoxyribonuclease YP_393596.1 1143107 R 326298 CDS YP_393597.1 78777282 3763785 complement(1143886..1145427) 1 NC_007575.1 ATPase 1145427 3763785 Suden_1084 Sulfurimonas denitrificans DSM 1251 ATPase YP_393597.1 1143886 R 326298 CDS YP_393598.1 78777283 3763786 complement(1145476..1146330) 1 NC_007575.1 NAD(+) kinase 1146330 3763786 Suden_1085 Sulfurimonas denitrificans DSM 1251 NAD(+) kinase YP_393598.1 1145476 R 326298 CDS YP_393599.1 78777284 3763787 1146459..1148201 1 NC_007575.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1148201 aspS 3763787 aspS Sulfurimonas denitrificans DSM 1251 aspartyl-tRNA synthetase YP_393599.1 1146459 D 326298 CDS YP_393600.1 78777285 3763878 1148260..1148829 1 NC_007575.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1148829 adk 3763878 adk Sulfurimonas denitrificans DSM 1251 adenylate kinase YP_393600.1 1148260 D 326298 CDS YP_393601.1 78777286 3763879 complement(1148968..1149615) 1 NC_007575.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1149615 adk 3763879 adk Sulfurimonas denitrificans DSM 1251 adenylate kinase YP_393601.1 1148968 R 326298 CDS YP_393602.1 78777287 3763880 complement(1149717..1150004) 1 NC_007575.1 hypothetical protein 1150004 3763880 Suden_1089 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393602.1 1149717 R 326298 CDS YP_393603.1 78777288 3763881 1150104..1150835 1 NC_007575.1 molybdopterin binding domain-containing protein 1150835 3763881 Suden_1090 Sulfurimonas denitrificans DSM 1251 molybdopterin binding domain-containing protein YP_393603.1 1150104 D 326298 CDS YP_393604.1 78777289 3763882 1151027..1151674 1 NC_007575.1 hypothetical protein 1151674 3763882 Suden_1091 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393604.1 1151027 D 326298 CDS YP_393605.1 78777290 3763883 complement(1151682..1152140) 1 NC_007575.1 ankyrin 1152140 3763883 Suden_1092 Sulfurimonas denitrificans DSM 1251 ankyrin YP_393605.1 1151682 R 326298 CDS YP_393606.1 78777291 3763884 1152184..1153458 1 NC_007575.1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1153458 3763884 Suden_1093 Sulfurimonas denitrificans DSM 1251 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_393606.1 1152184 D 326298 CDS YP_393607.1 78777292 3763885 1153486..1153791 1 NC_007575.1 hypothetical protein 1153791 3763885 Suden_1094 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393607.1 1153486 D 326298 CDS YP_393608.1 78777293 3763886 complement(1153899..1155227) 1 NC_007575.1 NLP/P60 1155227 3763886 Suden_1095 Sulfurimonas denitrificans DSM 1251 NLP/P60 YP_393608.1 1153899 R 326298 CDS YP_393609.1 78777294 3763887 complement(1155237..1155896) 1 NC_007575.1 phage repressor 1155896 3763887 Suden_1096 Sulfurimonas denitrificans DSM 1251 phage repressor YP_393609.1 1155237 R 326298 CDS YP_393610.1 78777295 3763888 complement(1156278..1156748) 1 NC_007575.1 tRNA/rRNA methyltransferase SpoU 1156748 3763888 Suden_1097 Sulfurimonas denitrificans DSM 1251 tRNA/rRNA methyltransferase SpoU YP_393610.1 1156278 R 326298 CDS YP_393611.1 78777296 3763889 complement(1156748..1157584) 1 NC_007575.1 formyltetrahydrofolate deformylase 1157584 3763889 Suden_1098 Sulfurimonas denitrificans DSM 1251 formyltetrahydrofolate deformylase YP_393611.1 1156748 R 326298 CDS YP_393612.1 78777297 3763890 complement(1157581..1157916) 1 NC_007575.1 hypothetical protein 1157916 3763890 Suden_1099 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393612.1 1157581 R 326298 CDS YP_393613.1 78777298 3763891 complement(1157907..1158155) 1 NC_007575.1 hypothetical protein 1158155 3763891 Suden_1100 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393613.1 1157907 R 326298 CDS YP_393614.1 78777299 3763892 complement(1158152..1159219) 1 NC_007575.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1159219 3763892 Suden_1101 Sulfurimonas denitrificans DSM 1251 3-isopropylmalate dehydrogenase YP_393614.1 1158152 R 326298 CDS YP_393615.1 78777300 3763893 complement(1159222..1159725) 1 NC_007575.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 1159725 leuD 3763893 leuD Sulfurimonas denitrificans DSM 1251 3-isopropylmalate dehydratase small subunit YP_393615.1 1159222 R 326298 CDS YP_393616.1 78777301 3763894 complement(1159873..1160661) 1 NC_007575.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1160661 flgG 3763894 flgG Sulfurimonas denitrificans DSM 1251 flagellar basal body rod protein FlgG YP_393616.1 1159873 R 326298 CDS YP_393617.1 78777302 3763895 complement(1160674..1161504) 1 NC_007575.1 flagellar basal body rod protein 1161504 3763895 Suden_1104 Sulfurimonas denitrificans DSM 1251 flagellar basal body rod protein YP_393617.1 1160674 R 326298 CDS YP_393618.1 78777303 3763896 1161640..1163511 1 NC_007575.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1163511 3763896 Suden_1105 Sulfurimonas denitrificans DSM 1251 RNA polymerase sigma factor RpoD YP_393618.1 1161640 D 326298 CDS YP_393619.1 78777304 3763655 1163523..1164206 1 NC_007575.1 hypothetical protein 1164206 3763655 Suden_1106 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393619.1 1163523 D 326298 CDS YP_393620.1 78777305 3763656 complement(1164190..1164684) 1 NC_007575.1 hypothetical protein 1164684 3763656 Suden_1107 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393620.1 1164190 R 326298 CDS YP_393621.1 78777306 3763657 complement(1164692..1165015) 1 NC_007575.1 hypothetical protein 1165015 3763657 Suden_1108 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393621.1 1164692 R 326298 CDS YP_393622.1 78777307 3763658 complement(1165008..1166300) 1 NC_007575.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1166300 3763658 Suden_1109 Sulfurimonas denitrificans DSM 1251 glutamate-1-semialdehyde aminotransferase YP_393622.1 1165008 R 326298 CDS YP_393623.1 78777308 3763659 1166448..1167278 1 NC_007575.1 hypothetical protein 1167278 3763659 Suden_1110 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393623.1 1166448 D 326298 CDS YP_393624.1 78777309 3763660 complement(1167287..1168219) 1 NC_007575.1 HpcH/HpaI aldolase 1168219 3763660 Suden_1111 Sulfurimonas denitrificans DSM 1251 HpcH/HpaI aldolase YP_393624.1 1167287 R 326298 CDS YP_393625.1 78777310 3763661 complement(1168216..1168548) 1 NC_007575.1 hypothetical protein 1168548 3763661 Suden_1112 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393625.1 1168216 R 326298 CDS YP_393626.1 78777311 3763662 1168608..1169465 1 NC_007575.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1169465 3763662 Suden_1113 Sulfurimonas denitrificans DSM 1251 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_393626.1 1168608 D 326298 CDS YP_393627.1 78777312 3763663 1169462..1170271 1 NC_007575.1 peptidase S26A, signal peptidase I 1170271 3763663 Suden_1114 Sulfurimonas denitrificans DSM 1251 peptidase S26A, signal peptidase I YP_393627.1 1169462 D 326298 CDS YP_393628.1 78777313 3763664 1170252..1170935 1 NC_007575.1 peptidase M50 1170935 3763664 Suden_1115 Sulfurimonas denitrificans DSM 1251 peptidase M50 YP_393628.1 1170252 D 326298 CDS YP_393629.1 78777314 3763665 1170949..1171386 1 NC_007575.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 1171386 3763665 Suden_1116 Sulfurimonas denitrificans DSM 1251 ribose-5-phosphate isomerase B YP_393629.1 1170949 D 326298 CDS YP_393630.1 78777315 3763666 1171410..1171742 1 NC_007575.1 hypothetical protein 1171742 3763666 Suden_1117 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393630.1 1171410 D 326298 CDS YP_393631.1 78777316 3763667 1171753..1172301 1 NC_007575.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1172301 3763667 Suden_1118 Sulfurimonas denitrificans DSM 1251 adenine phosphoribosyltransferase YP_393631.1 1171753 D 326298 CDS YP_393632.1 78777317 3763668 1172301..1173500 1 NC_007575.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1173500 3763668 Suden_1119 Sulfurimonas denitrificans DSM 1251 tryptophan synthase subunit beta YP_393632.1 1172301 D 326298 CDS YP_393633.1 78777318 3763669 1173510..1174925 1 NC_007575.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1174925 3763669 Suden_1120 Sulfurimonas denitrificans DSM 1251 leucyl aminopeptidase YP_393633.1 1173510 D 326298 CDS YP_393634.1 78777319 3763670 1174933..1175451 1 NC_007575.1 ribonuclease H 1175451 3763670 Suden_1121 Sulfurimonas denitrificans DSM 1251 ribonuclease H YP_393634.1 1174933 D 326298 CDS YP_393635.1 78777320 3763671 1175531..1176631 1 NC_007575.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1176631 3763671 Suden_1122 Sulfurimonas denitrificans DSM 1251 GTP-dependent nucleic acid-binding protein EngD YP_393635.1 1175531 D 326298 CDS YP_393636.1 78777321 3763672 1176719..1177588 1 NC_007575.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1177588 flgA 3763672 flgA Sulfurimonas denitrificans DSM 1251 flagellar basal body P-ring biosynthesis protein FlgA YP_393636.1 1176719 D 326298 CDS YP_393637.1 78777322 3763673 1177585..1178112 1 NC_007575.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1178112 3763673 Suden_1124 Sulfurimonas denitrificans DSM 1251 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_393637.1 1177585 D 326298 CDS YP_393638.1 78777323 3763674 1178103..1178603 1 NC_007575.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1178603 coaD 3763674 coaD Sulfurimonas denitrificans DSM 1251 phosphopantetheine adenylyltransferase YP_393638.1 1178103 D 326298 CDS YP_393639.1 78777324 3763636 1178588..1179163 1 NC_007575.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1179163 tmk 3763636 tmk Sulfurimonas denitrificans DSM 1251 thymidylate kinase YP_393639.1 1178588 D 326298 CDS YP_393640.1 78777325 3763637 1179256..1179810 1 NC_007575.1 hypothetical protein 1179810 3763637 Suden_1127 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393640.1 1179256 D 326298 CDS YP_393641.1 78777326 3763638 complement(1179807..1180709) 1 NC_007575.1 hypothetical protein 1180709 3763638 Suden_1128 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393641.1 1179807 R 326298 CDS YP_393642.1 78777327 3763639 complement(1180759..1181436) 1 NC_007575.1 superoxide dismutase 1181436 3763639 Suden_1129 Sulfurimonas denitrificans DSM 1251 superoxide dismutase YP_393642.1 1180759 R 326298 CDS YP_393643.1 78777328 3763640 1181585..1182796 1 NC_007575.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1182796 hisS 3763640 hisS Sulfurimonas denitrificans DSM 1251 histidyl-tRNA synthetase YP_393643.1 1181585 D 326298 CDS YP_393644.1 78777329 3763641 1182799..1184526 1 NC_007575.1 ferredoxin-dependent glutamate synthase 1184526 3763641 Suden_1131 Sulfurimonas denitrificans DSM 1251 ferredoxin-dependent glutamate synthase YP_393644.1 1182799 D 326298 CDS YP_393645.1 78777330 3763642 1184536..1186365 1 NC_007575.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1186365 3763642 Suden_1132 Sulfurimonas denitrificans DSM 1251 arginine decarboxylase YP_393645.1 1184536 D 326298 CDS YP_393646.1 78777331 3763643 1186375..1187076 1 NC_007575.1 Serine O-acetyltransferase 1187076 3763643 Suden_1133 Sulfurimonas denitrificans DSM 1251 Serine O-acetyltransferase YP_393646.1 1186375 D 326298 CDS YP_393647.1 78777332 3763644 1187124..1188287 1 NC_007575.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1188287 3763644 Suden_1134 Sulfurimonas denitrificans DSM 1251 aspartate aminotransferase YP_393647.1 1187124 D 326298 CDS YP_393648.1 78777333 3763645 complement(1188284..1190863) 1 NC_007575.1 hypothetical protein 1190863 3763645 Suden_1135 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393648.1 1188284 R 326298 CDS YP_393649.1 78777334 3763646 complement(1190923..1192617) 1 NC_007575.1 surface antigen (D15) 1192617 3763646 Suden_1136 Sulfurimonas denitrificans DSM 1251 surface antigen (D15) YP_393649.1 1190923 R 326298 CDS YP_393650.1 78777335 3763647 complement(1192641..1192844) 1 NC_007575.1 hypothetical protein 1192844 3763647 Suden_1137 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393650.1 1192641 R 326298 CDS YP_393651.1 78777336 3763648 complement(1192855..1193811) 1 NC_007575.1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD 1193811 3763648 Suden_1138 Sulfurimonas denitrificans DSM 1251 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD YP_393651.1 1192855 R 326298 CDS YP_393652.1 78777337 3763649 complement(1193820..1194770) 1 NC_007575.1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD 1194770 3763649 Suden_1139 Sulfurimonas denitrificans DSM 1251 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD YP_393652.1 1193820 R 326298 CDS YP_393653.1 78777338 3763650 complement(1194775..1195251) 1 NC_007575.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1195251 ilvH 3763650 ilvH Sulfurimonas denitrificans DSM 1251 acetolactate synthase 3 regulatory subunit YP_393653.1 1194775 R 326298 CDS YP_393654.1 78777339 3763651 complement(1195251..1196948) 1 NC_007575.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 1196948 3763651 Suden_1141 Sulfurimonas denitrificans DSM 1251 acetolactate synthase 3 catalytic subunit YP_393654.1 1195251 R 326298 CDS YP_393655.1 78777340 3763652 complement(1197050..1199173) 1 NC_007575.1 hypothetical protein 1199173 3763652 Suden_1142 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393655.1 1197050 R 326298 CDS YP_393656.1 78777341 3763653 complement(1199176..1200378) 1 NC_007575.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 1200378 3763653 Suden_1143 Sulfurimonas denitrificans DSM 1251 threonine dehydratase YP_393656.1 1199176 R 326298 CDS YP_393657.1 78777342 3763654 complement(1200388..1200816) 1 NC_007575.1 CoA-binding protein 1200816 3763654 Suden_1144 Sulfurimonas denitrificans DSM 1251 CoA-binding protein YP_393657.1 1200388 R 326298 CDS YP_393658.1 78777343 3763616 complement(1200883..1202331) 1 NC_007575.1 sodium/sulfate symporter 1202331 3763616 Suden_1145 Sulfurimonas denitrificans DSM 1251 sodium/sulfate symporter YP_393658.1 1200883 R 326298 CDS YP_393659.1 78777344 3763617 1202556..1203203 1 NC_007575.1 superfamily II DNA/RNA helicase-like protein 1203203 3763617 Suden_1146 Sulfurimonas denitrificans DSM 1251 superfamily II DNA/RNA helicase-like protein YP_393659.1 1202556 D 326298 CDS YP_393660.1 78777345 3763618 complement(1203215..1203985) 1 NC_007575.1 hypothetical protein 1203985 3763618 Suden_1147 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393660.1 1203215 R 326298 CDS YP_393661.1 78777346 3763619 complement(1203954..1205222) 1 NC_007575.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 1205222 3763619 Suden_1148 Sulfurimonas denitrificans DSM 1251 RNA polymerase factor sigma-54 YP_393661.1 1203954 R 326298 CDS YP_393662.1 78777347 3763620 complement(1205238..1205960) 1 NC_007575.1 ABC transporter-like protein 1205960 3763620 Suden_1149 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393662.1 1205238 R 326298 CDS YP_393663.1 78777348 3763621 complement(1205948..1206361) 1 NC_007575.1 hypothetical protein 1206361 3763621 Suden_1150 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393663.1 1205948 R 326298 CDS YP_393664.1 78777349 3763622 complement(1206358..1207344) 1 NC_007575.1 anthranilate phosphoribosyltransferase 1207344 3763622 Suden_1151 Sulfurimonas denitrificans DSM 1251 anthranilate phosphoribosyltransferase YP_393664.1 1206358 R 326298 CDS YP_393665.1 78777350 3763623 complement(1207341..1207589) 1 NC_007575.1 RNA-binding S4 1207589 3763623 Suden_1152 Sulfurimonas denitrificans DSM 1251 RNA-binding S4 YP_393665.1 1207341 R 326298 CDS YP_393666.1 78777351 3763624 1207736..1208242 1 NC_007575.1 flagellar basal body protein FliL 1208242 3763624 Suden_1153 Sulfurimonas denitrificans DSM 1251 flagellar basal body protein FliL YP_393666.1 1207736 D 326298 CDS YP_393667.1 78777352 3763625 1208298..1210868 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 1210868 3763625 Suden_1154 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393667.1 1208298 D 326298 CDS YP_393668.1 78777353 3763626 complement(1210904..1211821) 1 NC_007575.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 1211821 3763626 Suden_1155 Sulfurimonas denitrificans DSM 1251 manganese-dependent inorganic pyrophosphatase YP_393668.1 1210904 R 326298 CDS YP_393669.1 78777354 3763627 1211967..1213292 1 NC_007575.1 phospholipase D/transphosphatidylase 1213292 3763627 Suden_1156 Sulfurimonas denitrificans DSM 1251 phospholipase D/transphosphatidylase YP_393669.1 1211967 D 326298 CDS YP_393670.1 78777355 3763628 1213305..1214036 1 NC_007575.1 hypothetical protein 1214036 3763628 Suden_1157 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393670.1 1213305 D 326298 CDS YP_393671.1 78777356 3763629 complement(1214033..1214662) 1 NC_007575.1 nitroreductase 1214662 3763629 Suden_1158 Sulfurimonas denitrificans DSM 1251 nitroreductase YP_393671.1 1214033 R 326298 CDS YP_393672.1 78777357 3763630 1214732..1215631 1 NC_007575.1 auxin efflux carrier 1215631 3763630 Suden_1159 Sulfurimonas denitrificans DSM 1251 auxin efflux carrier YP_393672.1 1214732 D 326298 CDS YP_393673.1 78777358 3763631 1215642..1216088 1 NC_007575.1 SecC motif-containing protein 1216088 3763631 Suden_1160 Sulfurimonas denitrificans DSM 1251 SecC motif-containing protein YP_393673.1 1215642 D 326298 CDS YP_393674.1 78777359 3763632 complement(1216085..1217179) 1 NC_007575.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 1217179 3763632 Suden_1161 Sulfurimonas denitrificans DSM 1251 tRNA 2-selenouridine synthase YP_393674.1 1216085 R 326298 CDS YP_393675.1 78777360 3763633 complement(1217179..1218210) 1 NC_007575.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 1218210 3763633 Suden_1162 Sulfurimonas denitrificans DSM 1251 selenophosphate synthetase YP_393675.1 1217179 R 326298 CDS YP_393676.1 78777361 3763634 complement(1218234..1221062) 1 NC_007575.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1221062 uvrA 3763634 uvrA Sulfurimonas denitrificans DSM 1251 excinuclease ABC subunit A YP_393676.1 1218234 R 326298 CDS YP_393677.1 78777362 3763635 complement(1221069..1221809) 1 NC_007575.1 hypothetical protein 1221809 3763635 Suden_1164 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393677.1 1221069 R 326298 CDS YP_393678.1 78777363 3763714 1221942..1222364 1 NC_007575.1 hypothetical protein 1222364 3763714 Suden_1165 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393678.1 1221942 D 326298 CDS YP_393679.1 78777364 3763715 1222365..1222700 1 NC_007575.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1222700 3763715 Suden_1166 Sulfurimonas denitrificans DSM 1251 flagellar motor switch protein YP_393679.1 1222365 D 326298 CDS YP_393680.1 78777365 3763716 1222700..1223587 1 NC_007575.1 hypothetical protein 1223587 3763716 Suden_1167 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393680.1 1222700 D 326298 CDS YP_393681.1 78777366 3763717 complement(1223584..1224720) 1 NC_007575.1 hypothetical protein 1224720 3763717 Suden_1168 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393681.1 1223584 R 326298 CDS YP_393682.1 78777367 3763718 complement(1224714..1225670) 1 NC_007575.1 dihydrouridine synthase TIM-barrel protein nifR3 1225670 3763718 Suden_1169 Sulfurimonas denitrificans DSM 1251 dihydrouridine synthase TIM-barrel protein nifR3 YP_393682.1 1224714 R 326298 CDS YP_393683.1 78777368 3763719 complement(1225677..1226693) 1 NC_007575.1 hypothetical protein 1226693 3763719 Suden_1170 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393683.1 1225677 R 326298 CDS YP_393684.1 78777369 3763720 complement(1226703..1227053) 1 NC_007575.1 TraR/DksA family transcriptional regulator 1227053 3763720 Suden_1171 Sulfurimonas denitrificans DSM 1251 TraR/DksA family transcriptional regulator YP_393684.1 1226703 R 326298 CDS YP_393685.1 78777370 3763721 complement(1227070..1227528) 1 NC_007575.1 hypothetical protein 1227528 3763721 Suden_1172 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393685.1 1227070 R 326298 CDS YP_393686.1 78777371 3763722 complement(1227528..1228088) 1 NC_007575.1 thiamine monophosphate synthase 1228088 3763722 Suden_1173 Sulfurimonas denitrificans DSM 1251 thiamine monophosphate synthase YP_393686.1 1227528 R 326298 CDS YP_393687.1 78777372 3763723 complement(1228088..1228933) 1 NC_007575.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1228933 3763723 Suden_1174 Sulfurimonas denitrificans DSM 1251 acetyl-CoA carboxylase subunit beta YP_393687.1 1228088 R 326298 CDS YP_393688.1 78777373 3763724 complement(1229079..1230464) 1 NC_007575.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1230464 gltD 3763724 gltD Sulfurimonas denitrificans DSM 1251 glutamate synthase subunit beta YP_393688.1 1229079 R 326298 CDS YP_393689.1 78777374 3763725 complement(1230467..1234906) 1 NC_007575.1 glutamate synthase (NADPH) large subunit 1234906 3763725 Suden_1176 Sulfurimonas denitrificans DSM 1251 glutamate synthase (NADPH) large subunit YP_393689.1 1230467 R 326298 CDS YP_393690.1 78777375 3763726 1235084..1235704 1 NC_007575.1 recombination protein RecO 1235704 3763726 Suden_1177 Sulfurimonas denitrificans DSM 1251 recombination protein RecO YP_393690.1 1235084 D 326298 CDS YP_393691.1 78777376 3763727 1235764..1237356 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1237356 3763727 Suden_1178 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_393691.1 1235764 D 326298 CDS YP_393692.1 78777377 3763728 complement(1237362..1237916) 1 NC_007575.1 tellurite resistance protein TehB 1237916 3763728 Suden_1179 Sulfurimonas denitrificans DSM 1251 tellurite resistance protein TehB YP_393692.1 1237362 R 326298 CDS YP_393693.1 78777378 3763729 complement(1237927..1239075) 1 NC_007575.1 carboxynorspermidine decarboxylase 1239075 3763729 Suden_1180 Sulfurimonas denitrificans DSM 1251 carboxynorspermidine decarboxylase YP_393693.1 1237927 R 326298 CDS YP_393694.1 78777379 3763730 complement(1239079..1240263) 1 NC_007575.1 saccharopine dehydrogenase 1240263 3763730 Suden_1181 Sulfurimonas denitrificans DSM 1251 saccharopine dehydrogenase YP_393694.1 1239079 R 326298 CDS YP_393695.1 78777380 3763731 complement(1240367..1242172) 1 NC_007575.1 phospholipid/glycerol acyltransferase 1242172 3763731 Suden_1182 Sulfurimonas denitrificans DSM 1251 phospholipid/glycerol acyltransferase YP_393695.1 1240367 R 326298 CDS YP_393696.1 78777381 3763732 complement(1242186..1242905) 1 NC_007575.1 hypothetical protein 1242905 3763732 Suden_1183 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393696.1 1242186 R 326298 CDS YP_393697.1 78777382 3763844 1243069..1244301 1 NC_007575.1 hypothetical protein 1244301 3763844 Suden_1184 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393697.1 1243069 D 326298 CDS YP_393698.1 78777383 3763845 1244392..1244892 1 NC_007575.1 hypothetical protein 1244892 3763845 Suden_1185 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393698.1 1244392 D 326298 CDS YP_393699.1 78777384 3763846 1244934..1245365 1 NC_007575.1 hypothetical protein 1245365 3763846 Suden_1186 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393699.1 1244934 D 326298 CDS YP_393700.1 78777385 3763847 1245349..1245789 1 NC_007575.1 hypothetical protein 1245789 3763847 Suden_1187 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393700.1 1245349 D 326298 CDS YP_393701.1 78777386 3763848 complement(1245769..1246680) 1 NC_007575.1 ApbE-like lipoprotein 1246680 3763848 Suden_1188 Sulfurimonas denitrificans DSM 1251 ApbE-like lipoprotein YP_393701.1 1245769 R 326298 CDS YP_393702.1 78777387 3763849 complement(1246723..1247751) 1 NC_007575.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 1247751 3763849 Suden_1189 Sulfurimonas denitrificans DSM 1251 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_393702.1 1246723 R 326298 CDS YP_393703.1 78777388 3763853 1248438..1250543 1 NC_007575.1 ABC transporter-like protein 1250543 3763853 Suden_1190 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393703.1 1248438 D 326298 CDS YP_393704.1 78777389 3763854 1250540..1251814 1 NC_007575.1 Type I secretion membrane fusion protein, HlyD 1251814 3763854 Suden_1191 Sulfurimonas denitrificans DSM 1251 Type I secretion membrane fusion protein, HlyD YP_393704.1 1250540 D 326298 CDS YP_393705.1 78777390 3763855 1251957..1252910 1 NC_007575.1 hypothetical protein 1252910 3763855 Suden_1192 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393705.1 1251957 D 326298 CDS YP_393706.1 78777391 3763856 1252925..1254013 1 NC_007575.1 MotA/TolQ/ExbB proton channel 1254013 3763856 Suden_1193 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_393706.1 1252925 D 326298 CDS YP_393707.1 78777392 3763857 1254018..1254728 1 NC_007575.1 hypothetical protein 1254728 3763857 Suden_1194 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393707.1 1254018 D 326298 CDS YP_393708.1 78777393 3763858 1254728..1257502 1 NC_007575.1 Outer membrane efflux protein 1257502 3763858 Suden_1195 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_393708.1 1254728 D 326298 CDS YP_393709.1 78777394 3763859 1257499..1259574 1 NC_007575.1 diguanylate phosphodiesterase 1259574 3763859 Suden_1196 Sulfurimonas denitrificans DSM 1251 diguanylate phosphodiesterase YP_393709.1 1257499 D 326298 CDS YP_393710.1 78777395 3763558 1259585..1260064 1 NC_007575.1 hypothetical protein 1260064 3763558 Suden_1197 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393710.1 1259585 D 326298 CDS YP_393711.1 78777396 3763559 1260061..1260972 1 NC_007575.1 Sel1 repeat-containing protein 1260972 3763559 Suden_1198 Sulfurimonas denitrificans DSM 1251 Sel1 repeat-containing protein YP_393711.1 1260061 D 326298 CDS YP_393712.1 78777397 3763560 complement(1260976..1261785) 1 NC_007575.1 signal transduction protein 1261785 3763560 Suden_1199 Sulfurimonas denitrificans DSM 1251 signal transduction protein YP_393712.1 1260976 R 326298 CDS YP_393713.1 78777398 3763561 complement(1261963..1267557) 1 NC_007575.1 hemolysin-type calcium-binding region 1267557 3763561 Suden_1200 Sulfurimonas denitrificans DSM 1251 hemolysin-type calcium-binding region YP_393713.1 1261963 R 326298 CDS YP_393714.1 78777399 3763562 complement(1267764..1268192) 1 NC_007575.1 N-acetyltransferase 1268192 3763562 Suden_1201 Sulfurimonas denitrificans DSM 1251 N-acetyltransferase YP_393714.1 1267764 R 326298 CDS YP_393715.1 78777400 3763563 complement(1268189..1269169) 1 NC_007575.1 hypothetical protein 1269169 3763563 Suden_1202 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393715.1 1268189 R 326298 CDS YP_393716.1 78777401 3763565 complement(1269409..1269903) 1 NC_007575.1 histidine triad (HIT) protein 1269903 3763565 Suden_1203 Sulfurimonas denitrificans DSM 1251 histidine triad (HIT) protein YP_393716.1 1269409 R 326298 CDS YP_393717.1 78777402 3763566 complement(1270025..1271308) 1 NC_007575.1 TRAP dicarboxylate transporter subunit DctM 1271308 3763566 Suden_1204 Sulfurimonas denitrificans DSM 1251 TRAP dicarboxylate transporter subunit DctM YP_393717.1 1270025 R 326298 CDS YP_393718.1 78777403 3763567 complement(1271305..1271790) 1 NC_007575.1 tripartite ATP-independent periplasmic transporter DctQ 1271790 3763567 Suden_1205 Sulfurimonas denitrificans DSM 1251 tripartite ATP-independent periplasmic transporter DctQ YP_393718.1 1271305 R 326298 CDS YP_393719.1 78777404 3763568 complement(1271796..1273241) 1 NC_007575.1 cytoplasmic peptidoglycan synthetases-like protein 1273241 3763568 Suden_1206 Sulfurimonas denitrificans DSM 1251 cytoplasmic peptidoglycan synthetases-like protein YP_393719.1 1271796 R 326298 CDS YP_393720.1 78777405 3763569 complement(1273241..1273978) 1 NC_007575.1 alpha/beta hydrolase 1273978 3763569 Suden_1207 Sulfurimonas denitrificans DSM 1251 alpha/beta hydrolase YP_393720.1 1273241 R 326298 CDS YP_393721.1 78777406 3763570 complement(1273978..1275015) 1 NC_007575.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 1275015 ddl 3763570 ddl Sulfurimonas denitrificans DSM 1251 D-alanyl-alanine synthetase A YP_393721.1 1273978 R 326298 CDS YP_393722.1 78777407 3763571 complement(1275028..1275594) 1 NC_007575.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1275594 ruvA 3763571 ruvA Sulfurimonas denitrificans DSM 1251 Holliday junction DNA helicase RuvA YP_393722.1 1275028 R 326298 CDS YP_393723.1 78777408 3763572 complement(1275591..1277495) 1 NC_007575.1 hypothetical protein 1277495 3763572 Suden_1210 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393723.1 1275591 R 326298 CDS YP_393724.1 78777409 3763573 1277601..1279007 1 NC_007575.1 virulence factor MVIN-like 1279007 3763573 Suden_1211 Sulfurimonas denitrificans DSM 1251 virulence factor MVIN-like YP_393724.1 1277601 D 326298 CDS YP_393725.1 78777410 3763574 1278994..1280394 1 NC_007575.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1280394 cysS 3763574 cysS Sulfurimonas denitrificans DSM 1251 cysteinyl-tRNA synthetase YP_393725.1 1278994 D 326298 CDS YP_393726.1 78777411 3763575 complement(1280399..1281595) 1 NC_007575.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1281595 3763575 Suden_1213 Sulfurimonas denitrificans DSM 1251 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_393726.1 1280399 R 326298 CDS YP_393727.1 78777412 3763576 1281673..1282602 1 NC_007575.1 hypothetical protein 1282602 3763576 Suden_1214 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393727.1 1281673 D 326298 CDS YP_393728.1 78777413 3763539 complement(1282568..1283125) 1 NC_007575.1 hypothetical protein 1283125 3763539 Suden_1215 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393728.1 1282568 R 326298 CDS YP_393729.1 78777414 3763540 1283375..1284181 1 NC_007575.1 UbiA prenyltransferase 1284181 3763540 Suden_1216 Sulfurimonas denitrificans DSM 1251 UbiA prenyltransferase YP_393729.1 1283375 D 326298 CDS YP_393730.1 78777415 3763541 1284178..1284567 1 NC_007575.1 hypothetical protein 1284567 3763541 Suden_1217 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393730.1 1284178 D 326298 CDS YP_393731.1 78777416 3763542 1284570..1285862 1 NC_007575.1 FAD linked oxidase-like protein 1285862 3763542 Suden_1218 Sulfurimonas denitrificans DSM 1251 FAD linked oxidase-like protein YP_393731.1 1284570 D 326298 CDS YP_393732.1 78777417 3763543 1285859..1286590 1 NC_007575.1 short chain dehydrogenase 1286590 3763543 Suden_1219 Sulfurimonas denitrificans DSM 1251 short chain dehydrogenase YP_393732.1 1285859 D 326298 CDS YP_393733.1 78777418 3763544 1286587..1288059 1 NC_007575.1 glycosyltransferase 1288059 3763544 Suden_1220 Sulfurimonas denitrificans DSM 1251 glycosyltransferase YP_393733.1 1286587 D 326298 CDS YP_393734.1 78777419 3763545 1288056..1288634 1 NC_007575.1 phosphoserine phosphatase 1288634 3763545 Suden_1221 Sulfurimonas denitrificans DSM 1251 phosphoserine phosphatase YP_393734.1 1288056 D 326298 CDS YP_393735.1 78777420 3763546 1288776..1289564 1 NC_007575.1 alpha/beta hydrolase 1289564 3763546 Suden_1222 Sulfurimonas denitrificans DSM 1251 alpha/beta hydrolase YP_393735.1 1288776 D 326298 CDS YP_393736.1 78777421 3763547 1289588..1291753 1 NC_007575.1 heavy metal translocating P-type ATPase 1291753 3763547 Suden_1223 Sulfurimonas denitrificans DSM 1251 heavy metal translocating P-type ATPase YP_393736.1 1289588 D 326298 CDS YP_393737.1 78777422 3763548 1292006..1293064 1 NC_007575.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1293064 3763548 Suden_1224 Sulfurimonas denitrificans DSM 1251 dihydroorotate dehydrogenase 2 YP_393737.1 1292006 D 326298 CDS YP_393738.1 78777423 3763549 1293066..1294361 1 NC_007575.1 peptidase M16-like protein 1294361 3763549 Suden_1225 Sulfurimonas denitrificans DSM 1251 peptidase M16-like protein YP_393738.1 1293066 D 326298 CDS YP_393739.1 78777424 3763550 1294366..1295259 1 NC_007575.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1295259 3763550 Suden_1226 Sulfurimonas denitrificans DSM 1251 dihydrodipicolinate synthase YP_393739.1 1294366 D 326298 CDS YP_393740.1 78777425 3763551 1295261..1296043 1 NC_007575.1 Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 1296043 3763551 Suden_1227 Sulfurimonas denitrificans DSM 1251 7-alpha-hydroxysteroid dehydrogenase YP_393740.1 1295261 D 326298 CDS YP_393741.1 78777426 3763552 1296087..1296995 1 NC_007575.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1296995 hemD 3763552 hemD Sulfurimonas denitrificans DSM 1251 uroporphyrinogen-III synthase YP_393741.1 1296087 D 326298 CDS YP_393742.1 78777427 3763553 1297065..1297598 1 NC_007575.1 hypothetical protein 1297598 3763553 Suden_1229 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393742.1 1297065 D 326298 CDS YP_393743.1 78777428 3763554 complement(1297595..1297867) 1 NC_007575.1 molecular chaperone DnaJ 1297867 3763554 Suden_1230 Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaJ YP_393743.1 1297595 R 326298 CDS YP_393744.1 78777429 3763555 complement(1297864..1298637) 1 NC_007575.1 glycerophosphoryl diester phosphodiesterase 1298637 3763555 Suden_1231 Sulfurimonas denitrificans DSM 1251 glycerophosphoryl diester phosphodiesterase YP_393744.1 1297864 R 326298 CDS YP_393745.1 78777430 3763556 complement(1298641..1299849) 1 NC_007575.1 phospholipid/glycerol acyltransferase 1299849 3763556 Suden_1232 Sulfurimonas denitrificans DSM 1251 phospholipid/glycerol acyltransferase YP_393745.1 1298641 R 326298 CDS YP_393746.1 78777431 3763557 1299950..1300504 1 NC_007575.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1300504 3763557 Suden_1233 Sulfurimonas denitrificans DSM 1251 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_393746.1 1299950 D 326298 CDS YP_393747.1 78777432 3763694 1300501..1301553 1 NC_007575.1 peptidase M50, membrane-associated zinc metallopeptidase 1301553 3763694 Suden_1234 Sulfurimonas denitrificans DSM 1251 peptidase M50, membrane-associated zinc metallopeptidase YP_393747.1 1300501 D 326298 CDS YP_393748.1 78777433 3763695 1301557..1302231 1 NC_007575.1 hypothetical protein 1302231 3763695 Suden_1235 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393748.1 1301557 D 326298 CDS YP_393749.1 78777434 3763696 complement(1302249..1303007) 1 NC_007575.1 carbonate dehydratase 1303007 3763696 Suden_1236 Sulfurimonas denitrificans DSM 1251 carbonate dehydratase YP_393749.1 1302249 R 326298 CDS YP_393750.1 78777435 3763697 1303139..1304377 1 NC_007575.1 hypothetical protein 1304377 3763697 Suden_1237 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393750.1 1303139 D 326298 CDS YP_393751.1 78777436 3763698 complement(1304370..1304921) 1 NC_007575.1 thiamine monophosphate synthase 1304921 3763698 Suden_1238 Sulfurimonas denitrificans DSM 1251 thiamine monophosphate synthase YP_393751.1 1304370 R 326298 CDS YP_393752.1 78777437 3763699 1305097..1307193 1 NC_007575.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1307193 3763699 Suden_1239 Sulfurimonas denitrificans DSM 1251 anaerobic ribonucleoside triphosphate reductase YP_393752.1 1305097 D 326298 CDS YP_393753.1 78777438 3763700 1307443..1308024 1 NC_007575.1 radical-activating enzyme 1308024 3763700 Suden_1240 Sulfurimonas denitrificans DSM 1251 radical-activating enzyme YP_393753.1 1307443 D 326298 CDS YP_393754.1 78777439 3763701 1308070..1309773 1 NC_007575.1 ferredoxin--nitrite reductase 1309773 3763701 Suden_1241 Sulfurimonas denitrificans DSM 1251 ferredoxin--nitrite reductase YP_393754.1 1308070 D 326298 CDS YP_393755.1 78777440 3763702 complement(1309760..1310443) 1 NC_007575.1 two component transcriptional regulator 1310443 3763702 Suden_1242 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393755.1 1309760 R 326298 CDS YP_393756.1 78777441 3763703 complement(1310427..1311638) 1 NC_007575.1 PAS/PAC sensor signal transduction histidine kinase 1311638 3763703 Suden_1243 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor signal transduction histidine kinase YP_393756.1 1310427 R 326298 CDS YP_393757.1 78777442 3763704 complement(1311643..1314351) 1 NC_007575.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1314351 3763704 Suden_1244 Sulfurimonas denitrificans DSM 1251 DNA polymerase I YP_393757.1 1311643 R 326298 CDS YP_393758.1 78777443 3763705 complement(1314464..1315150) 1 NC_007575.1 hypothetical protein 1315150 3763705 Suden_1245 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393758.1 1314464 R 326298 CDS YP_393759.1 78777444 3763706 complement(1315180..1315689) 1 NC_007575.1 hypothetical protein 1315689 3763706 Suden_1246 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393759.1 1315180 R 326298 CDS YP_393760.1 78777445 3763707 complement(1315959..1316795) 1 NC_007575.1 Phage integrase 1316795 3763707 Suden_1247 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_393760.1 1315959 R 326298 CDS YP_393761.1 78777446 3763708 complement(1316798..1317757) 1 NC_007575.1 hypothetical protein 1317757 3763708 Suden_1248 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393761.1 1316798 R 326298 CDS YP_393762.1 78777447 3763709 complement(1317798..1318385) 1 NC_007575.1 hypothetical protein 1318385 3763709 Suden_1249 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393762.1 1317798 R 326298 CDS YP_393763.1 78777448 3763710 1318513..1318803 1 NC_007575.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1318803 gatC 3763710 gatC Sulfurimonas denitrificans DSM 1251 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_393763.1 1318513 D 326298 CDS YP_393764.1 78777449 3763711 1318864..1319946 1 NC_007575.1 pilus retraction protein PilT 1319946 3763711 Suden_1251 Sulfurimonas denitrificans DSM 1251 pilus retraction protein PilT YP_393764.1 1318864 D 326298 CDS YP_393765.1 78777450 3763712 complement(1319975..1320946) 1 NC_007575.1 hypothetical protein 1320946 3763712 Suden_1252 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393765.1 1319975 R 326298 CDS YP_393766.1 78777451 3763713 complement(1320954..1322177) 1 NC_007575.1 hypothetical protein 1322177 3763713 Suden_1253 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393766.1 1320954 R 326298 CDS YP_393767.1 78777452 3763675 complement(1322134..1323318) 1 NC_007575.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1323318 3763675 Suden_1254 Sulfurimonas denitrificans DSM 1251 acetylornithine aminotransferase YP_393767.1 1322134 R 326298 CDS YP_393768.1 78777453 3763676 complement(1323315..1325048) 1 NC_007575.1 molybdopterin oxidoreductase 1325048 3763676 Suden_1255 Sulfurimonas denitrificans DSM 1251 molybdopterin oxidoreductase YP_393768.1 1323315 R 326298 CDS YP_393769.1 78777454 3763677 complement(1325041..1325838) 1 NC_007575.1 hypothetical protein 1325838 3763677 Suden_1256 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393769.1 1325041 R 326298 CDS YP_393770.1 78777455 3763678 1325963..1326913 1 NC_007575.1 response regulator receiver (CheY-like) modulated CheW protein 1326913 3763678 Suden_1257 Sulfurimonas denitrificans DSM 1251 response regulator receiver (CheY-like) modulated CheW protein YP_393770.1 1325963 D 326298 CDS YP_393771.1 78777456 3763679 complement(1326951..1328282) 1 NC_007575.1 pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier subunit alpha 1328282 3763679 Suden_1258 Sulfurimonas denitrificans DSM 1251 pyruvate carboxylase/oxaloacetate decarboxylase biotin carboxyl carrier subunit alpha YP_393771.1 1326951 R 326298 CDS YP_393772.1 78777457 3763680 complement(1328287..1330098) 1 NC_007575.1 pyruvate carboxylase/oxaloacetate decarboxylase subunit beta 1330098 3763680 Suden_1259 Sulfurimonas denitrificans DSM 1251 pyruvate carboxylase/oxaloacetate decarboxylase subunit beta YP_393772.1 1328287 R 326298 CDS YP_393773.1 78777458 3763681 complement(1330107..1330346) 1 NC_007575.1 pyruvate carboxylase/oxaloacetate decarboxylase subunit gamma 1330346 3763681 Suden_1260 Sulfurimonas denitrificans DSM 1251 pyruvate carboxylase/oxaloacetate decarboxylase subunit gamma YP_393773.1 1330107 R 326298 CDS YP_393774.1 78777459 3763682 1330499..1330789 1 NC_007575.1 hypothetical protein 1330789 3763682 Suden_1261 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393774.1 1330499 D 326298 CDS YP_393775.1 78777460 3763683 1330854..1331162 1 NC_007575.1 hypothetical protein 1331162 3763683 Suden_1262 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393775.1 1330854 D 326298 CDS YP_393776.1 78777461 3763684 complement(1331333..1331839) 1 NC_007575.1 hypothetical protein 1331839 3763684 Suden_1263 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393776.1 1331333 R 326298 CDS YP_393777.1 78777462 3763685 complement(1331939..1333831) 1 NC_007575.1 molecular chaperone; heat shock protein 90 1333831 3763685 Suden_1264 Sulfurimonas denitrificans DSM 1251 heat shock protein 90 YP_393777.1 1331939 R 326298 CDS YP_393778.1 78777463 3763686 1334110..1334937 1 NC_007575.1 hypothetical protein 1334937 3763686 Suden_1265 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393778.1 1334110 D 326298 CDS YP_393779.1 78777464 3763687 1334950..1335273 1 NC_007575.1 hypothetical protein 1335273 3763687 Suden_1266 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393779.1 1334950 D 326298 CDS YP_393780.1 78777465 3763688 complement(1335270..1336667) 1 NC_007575.1 RNA-metabolising metallo-beta-lactamase 1336667 3763688 Suden_1267 Sulfurimonas denitrificans DSM 1251 RNA-metabolising metallo-beta-lactamase YP_393780.1 1335270 R 326298 CDS YP_393781.1 78777466 3763689 1336856..1338796 1 NC_007575.1 ABC transporter-like protein 1338796 3763689 Suden_1268 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393781.1 1336856 D 326298 CDS YP_393782.1 78777467 3763690 complement(1338813..1340162) 1 NC_007575.1 3-deoxy-7-phosphoheptulonate synthase 1340162 3763690 Suden_1269 Sulfurimonas denitrificans DSM 1251 3-deoxy-7-phosphoheptulonate synthase YP_393782.1 1338813 R 326298 CDS YP_393783.1 78777468 3763691 1340288..1341244 1 NC_007575.1 diguanylate cyclase 1341244 3763691 Suden_1270 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393783.1 1340288 D 326298 CDS YP_393784.1 78777469 3763692 1341244..1341894 1 NC_007575.1 colicin V production protein 1341894 3763692 Suden_1271 Sulfurimonas denitrificans DSM 1251 colicin V production protein YP_393784.1 1341244 D 326298 CDS YP_393785.1 78777470 3763693 1341896..1342372 1 NC_007575.1 ferric uptake regulator family protein 1342372 3763693 Suden_1272 Sulfurimonas denitrificans DSM 1251 ferric uptake regulator family protein YP_393785.1 1341896 D 326298 CDS YP_393786.1 78777471 3763596 1342393..1343907 1 NC_007575.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1343907 lysS 3763596 lysS Sulfurimonas denitrificans DSM 1251 lysyl-tRNA synthetase YP_393786.1 1342393 D 326298 CDS YP_393787.1 78777472 3763597 1343910..1345157 1 NC_007575.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1345157 glyA 3763597 glyA Sulfurimonas denitrificans DSM 1251 serine hydroxymethyltransferase YP_393787.1 1343910 D 326298 CDS YP_393788.1 78777473 3763598 1345167..1345709 1 NC_007575.1 hypothetical protein 1345709 3763598 Suden_1275 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393788.1 1345167 D 326298 CDS YP_393789.1 78777474 3763599 1345781..1346464 1 NC_007575.1 hypothetical protein 1346464 3763599 Suden_1276 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393789.1 1345781 D 326298 CDS YP_393790.1 78777475 3763600 1346510..1347913 1 NC_007575.1 anthranilate synthase 1347913 3763600 Suden_1277 Sulfurimonas denitrificans DSM 1251 anthranilate synthase YP_393790.1 1346510 D 326298 CDS YP_393791.1 78777476 3763601 1347996..1348787 1 NC_007575.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1348787 aroE 3763601 aroE Sulfurimonas denitrificans DSM 1251 shikimate 5-dehydrogenase YP_393791.1 1347996 D 326298 CDS YP_393792.1 78777477 3763602 complement(1348784..1349803) 1 NC_007575.1 aldo/keto reductase 1349803 3763602 Suden_1279 Sulfurimonas denitrificans DSM 1251 aldo/keto reductase YP_393792.1 1348784 R 326298 CDS YP_393793.1 78777478 3763603 complement(1349827..1352496) 1 NC_007575.1 glycosyl transferase 1352496 3763603 Suden_1280 Sulfurimonas denitrificans DSM 1251 glycosyl transferase YP_393793.1 1349827 R 326298 CDS YP_393794.1 78777479 3763604 complement(1352560..1355046) 1 NC_007575.1 resistance-nodulation-cell division family transporter 1355046 3763604 Suden_1281 Sulfurimonas denitrificans DSM 1251 resistance-nodulation-cell division family transporter YP_393794.1 1352560 R 326298 CDS YP_393795.1 78777480 3763605 complement(1355053..1355616) 1 NC_007575.1 toluene tolerance 1355616 3763605 Suden_1282 Sulfurimonas denitrificans DSM 1251 toluene tolerance YP_393795.1 1355053 R 326298 CDS YP_393796.1 78777481 3763606 complement(1355658..1356437) 1 NC_007575.1 VacJ-like lipoprotein 1356437 3763606 Suden_1283 Sulfurimonas denitrificans DSM 1251 VacJ-like lipoprotein YP_393796.1 1355658 R 326298 CDS YP_393797.1 78777482 3763607 complement(1356439..1357008) 1 NC_007575.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1357008 recR 3763607 recR Sulfurimonas denitrificans DSM 1251 recombination protein RecR YP_393797.1 1356439 R 326298 CDS YP_393798.1 78777483 3763608 complement(1357013..1358173) 1 NC_007575.1 MltA protein 1358173 3763608 Suden_1285 Sulfurimonas denitrificans DSM 1251 MltA protein YP_393798.1 1357013 R 326298 CDS YP_393799.1 78777484 3763609 1358273..1359394 1 NC_007575.1 molecular chaperone DnaJ 1359394 3763609 Suden_1286 Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaJ YP_393799.1 1358273 D 326298 CDS YP_393800.1 78777485 3763610 complement(1359664..1360143) 1 NC_007575.1 rhodanese-like protein 1360143 3763610 Suden_1287 Sulfurimonas denitrificans DSM 1251 rhodanese-like protein YP_393800.1 1359664 R 326298 CDS YP_393801.1 78777486 3763611 1360240..1360614 1 NC_007575.1 ArsR family transcriptional regulator 1360614 3763611 Suden_1288 Sulfurimonas denitrificans DSM 1251 ArsR family transcriptional regulator YP_393801.1 1360240 D 326298 CDS YP_393802.1 78777487 3763612 1360659..1361249 1 NC_007575.1 hypothetical protein 1361249 3763612 Suden_1289 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393802.1 1360659 D 326298 CDS YP_393803.1 78777488 3763613 complement(1361246..1362544) 1 NC_007575.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1362544 3763613 Suden_1290 Sulfurimonas denitrificans DSM 1251 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_393803.1 1361246 R 326298 CDS YP_393804.1 78777489 3763614 complement(1362541..1362888) 1 NC_007575.1 hypothetical protein 1362888 3763614 Suden_1291 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393804.1 1362541 R 326298 CDS YP_393805.1 78777490 3763615 1363055..1364518 1 NC_007575.1 hypothetical protein 1364518 3763615 Suden_1292 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393805.1 1363055 D 326298 CDS YP_393806.1 78777491 3763577 1364520..1365881 1 NC_007575.1 cell division protein FtsA 1365881 3763577 Suden_1293 Sulfurimonas denitrificans DSM 1251 cell division protein FtsA YP_393806.1 1364520 D 326298 CDS YP_393807.1 78777492 3763578 1365892..1367010 1 NC_007575.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1367010 3763578 Suden_1294 Sulfurimonas denitrificans DSM 1251 cell division protein FtsZ YP_393807.1 1365892 D 326298 CDS YP_393808.1 78777493 3763579 1367081..1367509 1 NC_007575.1 hypothetical protein 1367509 3763579 Suden_1295 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393808.1 1367081 D 326298 CDS YP_393809.1 78777494 3763580 1367525..1368181 1 NC_007575.1 Crp/Fnr family transcriptional regulator 1368181 3763580 Suden_1296 Sulfurimonas denitrificans DSM 1251 Crp/Fnr family transcriptional regulator YP_393809.1 1367525 D 326298 CDS YP_393810.1 78777495 3763581 1368185..1369120 1 NC_007575.1 hypothetical protein 1369120 3763581 Suden_1297 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393810.1 1368185 D 326298 CDS YP_393811.1 78777496 3763582 1369244..1371841 1 NC_007575.1 nitrous-oxide reductase 1371841 3763582 Suden_1298 Sulfurimonas denitrificans DSM 1251 nitrous-oxide reductase YP_393811.1 1369244 D 326298 CDS YP_393812.1 78777497 3763583 1372029..1372811 1 NC_007575.1 hypothetical protein 1372811 3763583 Suden_1299 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393812.1 1372029 D 326298 CDS YP_393813.1 78777498 3763584 1372814..1374031 1 NC_007575.1 periplasmic copper-binding protein 1374031 3763584 Suden_1300 Sulfurimonas denitrificans DSM 1251 periplasmic copper-binding protein YP_393813.1 1372814 D 326298 CDS YP_393814.1 78777499 3763585 1374035..1374775 1 NC_007575.1 4Fe-4S ferredoxin 1374775 3763585 Suden_1301 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_393814.1 1374035 D 326298 CDS YP_393815.1 78777500 3763586 1374786..1375397 1 NC_007575.1 hypothetical protein 1375397 3763586 Suden_1302 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393815.1 1374786 D 326298 CDS YP_393816.1 78777501 3763587 1375400..1375900 1 NC_007575.1 hypothetical protein 1375900 3763587 Suden_1303 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393816.1 1375400 D 326298 CDS YP_393817.1 78777502 3763588 1375915..1376820 1 NC_007575.1 NapH/MauN family ferredoxin-type protein 1376820 3763588 Suden_1304 Sulfurimonas denitrificans DSM 1251 NapH/MauN family ferredoxin-type protein YP_393817.1 1375915 D 326298 CDS YP_393818.1 78777503 3763589 1376824..1377462 1 NC_007575.1 ABC transporter-like protein 1377462 3763589 Suden_1305 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393818.1 1376824 D 326298 CDS YP_393819.1 78777504 3763590 1377449..1377898 1 NC_007575.1 hypothetical protein 1377898 3763590 Suden_1306 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393819.1 1377449 D 326298 CDS YP_393820.1 78777505 3763591 1377910..1378737 1 NC_007575.1 ABC-2 type transport system permease 1378737 3763591 Suden_1307 Sulfurimonas denitrificans DSM 1251 ABC-2 type transport system permease YP_393820.1 1377910 D 326298 CDS YP_393821.1 78777506 3763592 1378749..1379219 1 NC_007575.1 hypothetical protein 1379219 3763592 Suden_1308 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393821.1 1378749 D 326298 CDS YP_393822.1 78777507 3763593 1379412..1379882 1 NC_007575.1 hypothetical protein 1379882 3763593 Suden_1309 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393822.1 1379412 D 326298 CDS YP_393823.1 78777508 3763594 complement(1379921..1381273) 1 NC_007575.1 hypothetical protein 1381273 3763594 Suden_1310 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393823.1 1379921 R 326298 CDS YP_393824.1 78777509 3763595 complement(1381506..1382630) 1 NC_007575.1 hypothetical protein 1382630 3763595 Suden_1311 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393824.1 1381506 R 326298 CDS YP_393825.1 78777510 3763519 complement(1382715..1383344) 1 NC_007575.1 Crp/Fnr family transcriptional regulator 1383344 3763519 Suden_1312 Sulfurimonas denitrificans DSM 1251 Crp/Fnr family transcriptional regulator YP_393825.1 1382715 R 326298 CDS YP_393826.1 78777511 3763520 complement(1383341..1383772) 1 NC_007575.1 hypothetical protein 1383772 3763520 Suden_1313 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393826.1 1383341 R 326298 CDS YP_393827.1 78777512 3763521 complement(1383782..1384729) 1 NC_007575.1 hypothetical protein 1384729 3763521 Suden_1314 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393827.1 1383782 R 326298 CDS YP_393828.1 78777513 3763522 complement(1384729..1385397) 1 NC_007575.1 ABC transporter-like protein 1385397 3763522 Suden_1315 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393828.1 1384729 R 326298 CDS YP_393829.1 78777514 3763523 complement(1385397..1386626) 1 NC_007575.1 hypothetical protein 1386626 3763523 Suden_1316 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393829.1 1385397 R 326298 CDS YP_393830.1 78777515 3763524 complement(1386842..1387936) 1 NC_007575.1 hypothetical protein 1387936 3763524 Suden_1317 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393830.1 1386842 R 326298 CDS YP_393831.1 78777516 3763525 complement(1387968..1388447) 1 NC_007575.1 hypothetical protein 1388447 3763525 Suden_1318 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393831.1 1387968 R 326298 CDS YP_393832.1 78777517 3763526 complement(1388451..1389281) 1 NC_007575.1 modification methylase HemK 1389281 3763526 Suden_1319 Sulfurimonas denitrificans DSM 1251 modification methylase HemK YP_393832.1 1388451 R 326298 CDS YP_393833.1 78777518 3763527 complement(1389263..1390564) 1 NC_007575.1 Ste24 endopeptidase 1390564 3763527 Suden_1320 Sulfurimonas denitrificans DSM 1251 Ste24 endopeptidase YP_393833.1 1389263 R 326298 CDS YP_393834.1 78777519 3763528 1390622..1391383 1 NC_007575.1 patatin 1391383 3763528 Suden_1321 Sulfurimonas denitrificans DSM 1251 patatin YP_393834.1 1390622 D 326298 CDS YP_393835.1 78777520 3763529 1391436..1391753 1 NC_007575.1 hypothetical protein 1391753 3763529 Suden_1322 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393835.1 1391436 D 326298 CDS YP_393836.1 78777521 3763530 1391814..1393250 1 NC_007575.1 catalase 1393250 3763530 Suden_1323 Sulfurimonas denitrificans DSM 1251 catalase YP_393836.1 1391814 D 326298 CDS YP_393837.1 78777522 3763531 complement(1393331..1393621) 1 NC_007575.1 hypothetical protein 1393621 3763531 Suden_1324 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393837.1 1393331 R 326298 CDS YP_393838.1 78777523 3763532 complement(1393874..1395217) 1 NC_007575.1 sodium/sulfate symporter 1395217 3763532 Suden_1325 Sulfurimonas denitrificans DSM 1251 sodium/sulfate symporter YP_393838.1 1393874 R 326298 CDS YP_393839.1 78777524 3763533 complement(1395264..1396730) 1 NC_007575.1 Sodium/proline symporter 1396730 3763533 Suden_1326 Sulfurimonas denitrificans DSM 1251 Sodium/proline symporter YP_393839.1 1395264 R 326298 CDS YP_393840.1 78777525 3763534 complement(1396731..1400279) 1 NC_007575.1 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase 1400279 3763534 Suden_1327 Sulfurimonas denitrificans DSM 1251 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase YP_393840.1 1396731 R 326298 CDS YP_393841.1 78777526 3763535 1400561..1402255 1 NC_007575.1 diguanylate cyclase 1402255 3763535 Suden_1328 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393841.1 1400561 D 326298 CDS YP_393842.1 78777527 3763536 1402363..1402734 1 NC_007575.1 hypothetical protein 1402734 3763536 Suden_1329 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393842.1 1402363 D 326298 CDS YP_393843.1 78777528 3763537 complement(1402740..1403630) 1 NC_007575.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1403630 gpsA 3763537 gpsA Sulfurimonas denitrificans DSM 1251 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_393843.1 1402740 R 326298 CDS YP_393844.1 78777529 3763538 complement(1403623..1404321) 1 NC_007575.1 hypothetical protein 1404321 3763538 Suden_1331 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393844.1 1403623 R 326298 CDS YP_393845.1 78777530 3763462 complement(1404321..1405874) 1 NC_007575.1 TrkA-N:Ion transport protein 1405874 3763462 Suden_1332 Sulfurimonas denitrificans DSM 1251 TrkA-N:Ion transport protein YP_393845.1 1404321 R 326298 CDS YP_393846.1 78777531 3763463 complement(1405880..1407304) 1 NC_007575.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1407304 gatB 3763463 gatB Sulfurimonas denitrificans DSM 1251 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_393846.1 1405880 R 326298 CDS YP_393847.1 78777532 3763464 1407426..1408604 1 NC_007575.1 hypothetical protein 1408604 3763464 Suden_1334 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393847.1 1407426 D 326298 CDS YP_393848.1 78777533 3763465 1408618..1409013 1 NC_007575.1 hypothetical protein 1409013 3763465 Suden_1335 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393848.1 1408618 D 326298 CDS YP_393849.1 78777534 3763466 1409000..1410319 1 NC_007575.1 diguanylate cyclase 1410319 3763466 Suden_1336 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393849.1 1409000 D 326298 CDS YP_393850.1 78777535 3763467 complement(1410346..1410741) 1 NC_007575.1 hypothetical protein 1410741 3763467 Suden_1337 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393850.1 1410346 R 326298 CDS YP_393851.1 78777536 3763468 complement(1410744..1411007) 1 NC_007575.1 hypothetical protein 1411007 3763468 Suden_1338 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393851.1 1410744 R 326298 CDS YP_393852.1 78777537 3763469 complement(1411019..1411693) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 1411693 3763469 Suden_1339 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit A YP_393852.1 1411019 R 326298 CDS YP_393853.1 78777538 3763470 complement(1411771..1412646) 1 NC_007575.1 pseudouridylate synthase 1412646 3763470 Suden_1340 Sulfurimonas denitrificans DSM 1251 pseudouridylate synthase YP_393853.1 1411771 R 326298 CDS YP_393854.1 78777539 3763471 complement(1412811..1413641) 1 NC_007575.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1413641 3763471 Suden_1341 Sulfurimonas denitrificans DSM 1251 bifunctional riboflavin kinase/FMN adenylyltransferase YP_393854.1 1412811 R 326298 CDS YP_393855.1 78777540 3763472 complement(1413700..1415043) 1 NC_007575.1 divalent cation transporter 1415043 3763472 Suden_1342 Sulfurimonas denitrificans DSM 1251 divalent cation transporter YP_393855.1 1413700 R 326298 CDS YP_393856.1 78777541 3763473 complement(1415164..1415874) 1 NC_007575.1 hemolysin A 1415874 3763473 Suden_1343 Sulfurimonas denitrificans DSM 1251 hemolysin A YP_393856.1 1415164 R 326298 CDS YP_393857.1 78777542 3763474 complement(1415861..1417819) 1 NC_007575.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1417819 ligA 3763474 ligA Sulfurimonas denitrificans DSM 1251 NAD-dependent DNA ligase LigA YP_393857.1 1415861 R 326298 CDS YP_393858.1 78777543 3763475 1417954..1418901 1 NC_007575.1 hypothetical protein 1418901 3763475 Suden_1345 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393858.1 1417954 D 326298 CDS YP_393859.1 78777544 3763476 1418976..1419959 1 NC_007575.1 sulfonate/nitrate transport system substrate-binding protein 1419959 3763476 Suden_1346 Sulfurimonas denitrificans DSM 1251 sulfonate/nitrate transport system substrate-binding protein YP_393859.1 1418976 D 326298 CDS YP_393860.1 78777545 3763477 1419960..1420742 1 NC_007575.1 binding-protein dependent transport system inner membrane protein 1420742 3763477 Suden_1347 Sulfurimonas denitrificans DSM 1251 binding-protein dependent transport system inner membrane protein YP_393860.1 1419960 D 326298 CDS YP_393861.1 78777546 3763478 1420730..1421470 1 NC_007575.1 ABC transporter-like protein 1421470 3763478 Suden_1348 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393861.1 1420730 D 326298 CDS YP_393862.1 78777547 3763479 1421467..1422717 1 NC_007575.1 protein NnrS 1422717 3763479 Suden_1349 Sulfurimonas denitrificans DSM 1251 protein NnrS YP_393862.1 1421467 D 326298 CDS YP_393863.1 78777548 3763480 complement(1422754..1423320) 1 NC_007575.1 type III restriction-modification enzyme, helicase subunit 1423320 3763480 Suden_1350 Sulfurimonas denitrificans DSM 1251 type III restriction-modification enzyme, helicase subunit YP_393863.1 1422754 R 326298 CDS YP_393864.1 78777549 3763442 complement(1423628..1425058) 1 NC_007575.1 hypothetical protein 1425058 3763442 Suden_1351 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393864.1 1423628 R 326298 CDS YP_393865.1 78777550 3763443 1425326..1425595 1 NC_007575.1 XRE family transcriptional regulator 1425595 3763443 Suden_1352 Sulfurimonas denitrificans DSM 1251 XRE family transcriptional regulator YP_393865.1 1425326 D 326298 CDS YP_393866.1 78777551 3763444 1425777..1426070 1 NC_007575.1 hypothetical protein 1426070 3763444 Suden_1353 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393866.1 1425777 D 326298 CDS YP_393867.1 78777552 3763446 complement(1426877..1428013) 1 NC_007575.1 site-specific DNA-methyltransferase (adenine-specific) 1428013 3763446 Suden_1355 Sulfurimonas denitrificans DSM 1251 site-specific DNA-methyltransferase (adenine-specific) YP_393867.1 1426877 R 326298 CDS YP_393868.1 78777553 3763447 1428167..1428364 1 NC_007575.1 hypothetical protein 1428364 3763447 Suden_1356 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393868.1 1428167 D 326298 CDS YP_393869.1 78777554 3763448 1428471..1428710 1 NC_007575.1 hypothetical protein 1428710 3763448 Suden_1357 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393869.1 1428471 D 326298 CDS YP_393870.1 78777555 3763449 complement(1428731..1430902) 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 1430902 3763449 Suden_1358 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_393870.1 1428731 R 326298 CDS YP_393871.1 78777556 3763450 complement(1430955..1432181) 1 NC_007575.1 multi anti extrusion protein MatE 1432181 3763450 Suden_1359 Sulfurimonas denitrificans DSM 1251 multi anti extrusion protein MatE YP_393871.1 1430955 R 326298 CDS YP_393872.1 78777557 3763451 complement(1432268..1432549) 1 NC_007575.1 hypothetical protein 1432549 3763451 Suden_1360 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393872.1 1432268 R 326298 CDS YP_393873.1 78777558 3763452 1432741..1433991 1 NC_007575.1 Outer membrane efflux protein 1433991 3763452 Suden_1361 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_393873.1 1432741 D 326298 CDS YP_393874.1 78777559 3763453 1433988..1435133 1 NC_007575.1 secretion protein HlyD 1435133 3763453 Suden_1362 Sulfurimonas denitrificans DSM 1251 secretion protein HlyD YP_393874.1 1433988 D 326298 CDS YP_393875.1 78777560 3763454 1435130..1436275 1 NC_007575.1 hypothetical protein 1436275 3763454 Suden_1363 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393875.1 1435130 D 326298 CDS YP_393876.1 78777561 3763455 1436277..1436990 1 NC_007575.1 ABC transporter-like protein 1436990 3763455 Suden_1364 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_393876.1 1436277 D 326298 CDS YP_393877.1 78777562 3763456 1437024..1437683 1 NC_007575.1 two component transcriptional regulator 1437683 3763456 Suden_1365 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393877.1 1437024 D 326298 CDS YP_393878.1 78777563 3763457 1437706..1438821 1 NC_007575.1 histidine kinase 1438821 3763457 Suden_1366 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393878.1 1437706 D 326298 CDS YP_393879.1 78777564 3763458 1438815..1439141 1 NC_007575.1 hypothetical protein 1439141 3763458 Suden_1367 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393879.1 1438815 D 326298 CDS YP_393880.1 78777565 3763459 1439399..1439686 1 NC_007575.1 hypothetical protein 1439686 3763459 Suden_1368 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393880.1 1439399 D 326298 CDS YP_393881.1 78777566 3763460 1439699..1440679 1 NC_007575.1 K+-dependent Na+/Ca+ exchanger-like protein 1440679 3763460 Suden_1369 Sulfurimonas denitrificans DSM 1251 K+-dependent Na+/Ca+ exchanger-like protein YP_393881.1 1439699 D 326298 CDS YP_393882.1 78777567 3763461 complement(1440756..1441604) 1 NC_007575.1 hypothetical protein 1441604 3763461 Suden_1370 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393882.1 1440756 R 326298 CDS YP_393883.1 78777568 3763423 complement(1441627..1442835) 1 NC_007575.1 hypothetical protein 1442835 3763423 Suden_1371 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393883.1 1441627 R 326298 CDS YP_393884.1 78777569 3763424 1442955..1443335 1 NC_007575.1 flagellar protein FlaG protein 1443335 3763424 Suden_1372 Sulfurimonas denitrificans DSM 1251 flagellar protein FlaG protein YP_393884.1 1442955 D 326298 CDS YP_393885.1 78777570 3763425 1443472..1444686 1 NC_007575.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1444686 3763425 Suden_1373 Sulfurimonas denitrificans DSM 1251 argininosuccinate synthase YP_393885.1 1443472 D 326298 CDS YP_393886.1 78777571 3763426 1444705..1445442 1 NC_007575.1 rhodanese-like protein 1445442 3763426 Suden_1374 Sulfurimonas denitrificans DSM 1251 rhodanese-like protein YP_393886.1 1444705 D 326298 CDS YP_393887.1 78777572 3763427 1445454..1445900 1 NC_007575.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1445900 rplI 3763427 rplI Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L9 YP_393887.1 1445454 D 326298 CDS YP_393888.1 78777573 3763428 1445900..1446445 1 NC_007575.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1446445 3763428 Suden_1376 Sulfurimonas denitrificans DSM 1251 ATP-dependent protease peptidase subunit YP_393888.1 1445900 D 326298 CDS YP_393889.1 78777574 3763429 1446442..1447770 1 NC_007575.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1447770 hslU 3763429 hslU Sulfurimonas denitrificans DSM 1251 ATP-dependent protease ATP-binding subunit HslU YP_393889.1 1446442 D 326298 CDS YP_393890.1 78777575 3763430 1447780..1448682 1 NC_007575.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1448682 era 3763430 era Sulfurimonas denitrificans DSM 1251 GTP-binding protein Era YP_393890.1 1447780 D 326298 CDS YP_393891.1 78777576 3763431 1448679..1449644 1 NC_007575.1 hypothetical protein 1449644 3763431 Suden_1379 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393891.1 1448679 D 326298 CDS YP_393892.1 78777577 3763432 1449657..1450952 1 NC_007575.1 hypothetical protein 1450952 3763432 Suden_1380 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393892.1 1449657 D 326298 CDS YP_393893.1 78777578 3763433 1450964..1452517 1 NC_007575.1 hypothetical protein 1452517 3763433 Suden_1381 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393893.1 1450964 D 326298 CDS YP_393894.1 78777579 3763434 1452514..1453155 1 NC_007575.1 hypothetical protein 1453155 3763434 Suden_1382 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393894.1 1452514 D 326298 CDS YP_393895.1 78777580 3763435 1453152..1453607 1 NC_007575.1 hypothetical protein 1453607 3763435 Suden_1383 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393895.1 1453152 D 326298 CDS YP_393896.1 78777581 3763436 1453618..1455309 1 NC_007575.1 type II and III secretion system protein 1455309 3763436 Suden_1384 Sulfurimonas denitrificans DSM 1251 type II and III secretion system protein YP_393896.1 1453618 D 326298 CDS YP_393897.1 78777582 3763437 1455306..1456082 1 NC_007575.1 hypothetical protein 1456082 3763437 Suden_1385 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393897.1 1455306 D 326298 CDS YP_393898.1 78777583 3763438 1456079..1456396 1 NC_007575.1 hypothetical protein 1456396 3763438 Suden_1386 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393898.1 1456079 D 326298 CDS YP_393899.1 78777584 3763439 1456405..1458138 1 NC_007575.1 type II secretion system protein E 1458138 3763439 Suden_1387 Sulfurimonas denitrificans DSM 1251 type II secretion system protein E YP_393899.1 1456405 D 326298 CDS YP_393900.1 78777585 3763440 1458138..1459382 1 NC_007575.1 type II secretion system protein 1459382 3763440 Suden_1388 Sulfurimonas denitrificans DSM 1251 type II secretion system protein YP_393900.1 1458138 D 326298 CDS YP_393901.1 78777586 3763441 complement(1459410..1460120) 1 NC_007575.1 hypothetical protein 1460120 3763441 Suden_1389 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393901.1 1459410 R 326298 CDS YP_393902.1 78777587 3763399 1460218..1460709 1 NC_007575.1 hypothetical protein 1460709 3763399 Suden_1390 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393902.1 1460218 D 326298 CDS YP_393903.1 78777588 3763400 complement(1460699..1461481) 1 NC_007575.1 hypothetical protein 1461481 3763400 Suden_1391 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393903.1 1460699 R 326298 CDS YP_393904.1 78777589 3763401 complement(1461521..1462234) 1 NC_007575.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1462234 3763401 Suden_1392 Sulfurimonas denitrificans DSM 1251 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_393904.1 1461521 R 326298 CDS YP_393905.1 78777590 3763402 complement(1462393..1463331) 1 NC_007575.1 malonyl CoA-ACP transacylase 1463331 3763402 Suden_1393 Sulfurimonas denitrificans DSM 1251 malonyl CoA-ACP transacylase YP_393905.1 1462393 R 326298 CDS YP_393906.1 78777591 3763403 complement(1463341..1464090) 1 NC_007575.1 Fis family transcriptional regulator 1464090 3763403 Suden_1394 Sulfurimonas denitrificans DSM 1251 Fis family transcriptional regulator YP_393906.1 1463341 R 326298 CDS YP_393907.1 78777592 3763404 complement(1464080..1464592) 1 NC_007575.1 peptidylprolyl isomerase, FKBP-type 1464592 3763404 Suden_1395 Sulfurimonas denitrificans DSM 1251 peptidylprolyl isomerase, FKBP-type YP_393907.1 1464080 R 326298 CDS YP_393908.1 78777593 3763405 complement(1464634..1465563) 1 NC_007575.1 hypothetical protein 1465563 3763405 Suden_1396 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393908.1 1464634 R 326298 CDS YP_393909.1 78777594 3763406 complement(1465567..1466097) 1 NC_007575.1 OmpA/MotB protein 1466097 3763406 Suden_1397 Sulfurimonas denitrificans DSM 1251 OmpA/MotB protein YP_393909.1 1465567 R 326298 CDS YP_393910.1 78777595 3763407 complement(1466170..1467423) 1 NC_007575.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1467423 tolB 3763407 tolB Sulfurimonas denitrificans DSM 1251 translocation protein TolB YP_393910.1 1466170 R 326298 CDS YP_393911.1 78777596 3763408 complement(1467427..1468194) 1 NC_007575.1 hypothetical protein 1468194 3763408 Suden_1399 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393911.1 1467427 R 326298 CDS YP_393912.1 78777597 3763409 complement(1468187..1468579) 1 NC_007575.1 biopolymer transport protein ExbD/TolR 1468579 3763409 Suden_1400 Sulfurimonas denitrificans DSM 1251 biopolymer transport protein ExbD/TolR YP_393912.1 1468187 R 326298 CDS YP_393913.1 78777598 3763410 complement(1468583..1469149) 1 NC_007575.1 MotA/TolQ/ExbB proton channel 1469149 3763410 Suden_1401 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_393913.1 1468583 R 326298 CDS YP_393914.1 78777599 3763411 complement(1469155..1469547) 1 NC_007575.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 1469547 atpC 3763411 atpC Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit epsilon YP_393914.1 1469155 R 326298 CDS YP_393915.1 78777600 3763412 complement(1469564..1470970) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 1470970 3763412 Suden_1403 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit beta YP_393915.1 1469564 R 326298 CDS YP_393916.1 78777601 3763413 complement(1470970..1471857) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 1471857 3763413 Suden_1404 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit gamma YP_393916.1 1470970 R 326298 CDS YP_393917.1 78777602 3763414 complement(1471867..1473384) 1 NC_007575.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 1473384 3763414 Suden_1405 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit alpha YP_393917.1 1471867 R 326298 CDS YP_393918.1 78777603 3763415 complement(1473408..1473941) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 1473941 3763415 Suden_1406 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit delta YP_393918.1 1473408 R 326298 CDS YP_393919.1 78777604 3763416 complement(1473941..1474450) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 1474450 3763416 Suden_1407 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit B YP_393919.1 1473941 R 326298 CDS YP_393920.1 78777605 3763417 complement(1474460..1474882) 1 NC_007575.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; ATP synthase F0F1 subunit B' 1474882 3763417 Suden_1408 Sulfurimonas denitrificans DSM 1251 ATP synthase F0F1 subunit B' YP_393920.1 1474460 R 326298 CDS YP_393921.1 78777606 3763418 complement(1475007..1475849) 1 NC_007575.1 ParB-like partition protein 1475849 3763418 Suden_1409 Sulfurimonas denitrificans DSM 1251 ParB-like partition protein YP_393921.1 1475007 R 326298 CDS YP_393922.1 78777607 3763500 complement(1475846..1476631) 1 NC_007575.1 cobyrinic acid a,c-diamide synthase 1476631 3763500 Suden_1410 Sulfurimonas denitrificans DSM 1251 cobyrinic acid a,c-diamide synthase YP_393922.1 1475846 R 326298 CDS YP_393923.1 78777608 3763501 complement(1476628..1477263) 1 NC_007575.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 1477263 3763501 Suden_1411 Sulfurimonas denitrificans DSM 1251 biotin--protein ligase YP_393923.1 1476628 R 326298 CDS YP_393924.1 78777609 3763502 complement(1477244..1478152) 1 NC_007575.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 1478152 fmt 3763502 fmt Sulfurimonas denitrificans DSM 1251 methionyl-tRNA formyltransferase YP_393924.1 1477244 R 326298 CDS YP_393925.1 78777610 3763503 complement(1478152..1478916) 1 NC_007575.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1478916 3763503 Suden_1413 Sulfurimonas denitrificans DSM 1251 gamma-glutamyl kinase YP_393925.1 1478152 R 326298 CDS YP_393926.1 78777611 3763504 complement(1478945..1480054) 1 NC_007575.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1480054 obgE 3763504 obgE Sulfurimonas denitrificans DSM 1251 GTPase ObgE YP_393926.1 1478945 R 326298 CDS YP_393927.1 78777612 3763505 complement(1480187..1480444) 1 NC_007575.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1480444 rpmA 3763505 rpmA Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L27 YP_393927.1 1480187 R 326298 CDS YP_393928.1 78777613 3763506 complement(1480476..1480784) 1 NC_007575.1 50S ribosomal protein L21 1480784 rplU 3763506 rplU Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L21 YP_393928.1 1480476 R 326298 CDS YP_393929.1 78777614 3763507 complement(1480928..1482154) 1 NC_007575.1 group 1 glycosyl transferase 1482154 3763507 Suden_1417 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_393929.1 1480928 R 326298 CDS YP_393930.1 78777615 3763508 complement(1482147..1483214) 1 NC_007575.1 UDP-N-acetylglucosamine 2-epimerase 1483214 3763508 Suden_1418 Sulfurimonas denitrificans DSM 1251 UDP-N-acetylglucosamine 2-epimerase YP_393930.1 1482147 R 326298 CDS YP_393931.1 78777616 3763509 complement(1483211..1484308) 1 NC_007575.1 group 1 glycosyl transferase 1484308 3763509 Suden_1419 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_393931.1 1483211 R 326298 CDS YP_393932.1 78777617 3763510 complement(1484305..1485522) 1 NC_007575.1 O-antigen translocase 1485522 3763510 Suden_1420 Sulfurimonas denitrificans DSM 1251 O-antigen translocase YP_393932.1 1484305 R 326298 CDS YP_393933.1 78777618 3763511 complement(1485603..1486181) 1 NC_007575.1 hexapaptide repeat-containing transferase 1486181 3763511 Suden_1421 Sulfurimonas denitrificans DSM 1251 hexapaptide repeat-containing transferase YP_393933.1 1485603 R 326298 CDS YP_393934.1 78777619 3763512 complement(1486181..1487149) 1 NC_007575.1 oxidoreductase-like 1487149 3763512 Suden_1422 Sulfurimonas denitrificans DSM 1251 oxidoreductase-like YP_393934.1 1486181 R 326298 CDS YP_393935.1 78777620 3763513 complement(1487152..1488417) 1 NC_007575.1 UDP-glucose/GDP-mannose dehydrogenase 1488417 3763513 Suden_1423 Sulfurimonas denitrificans DSM 1251 UDP-glucose/GDP-mannose dehydrogenase YP_393935.1 1487152 R 326298 CDS YP_393936.1 78777621 3763514 complement(1488556..1488897) 1 NC_007575.1 hydrogenase expression/synthesis, HypA 1488897 3763514 Suden_1424 Sulfurimonas denitrificans DSM 1251 hydrogenase expression/synthesis, HypA YP_393936.1 1488556 R 326298 CDS YP_393937.1 78777622 3763515 complement(1488941..1490581) 1 NC_007575.1 NiFe-hydrogenase maturation factor, HypX/HoxX type 1490581 3763515 Suden_1425 Sulfurimonas denitrificans DSM 1251 NiFe-hydrogenase maturation factor, HypX/HoxX type YP_393937.1 1488941 R 326298 CDS YP_393938.1 78777623 3763516 complement(1490586..1491584) 1 NC_007575.1 hydrogenase expression/formation protein HypE 1491584 3763516 Suden_1426 Sulfurimonas denitrificans DSM 1251 hydrogenase expression/formation protein HypE YP_393938.1 1490586 R 326298 CDS YP_393939.1 78777624 3763517 complement(1491585..1492934) 1 NC_007575.1 hypothetical protein 1492934 3763517 Suden_1427 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393939.1 1491585 R 326298 CDS YP_393940.1 78777625 3763518 complement(1493160..1494302) 1 NC_007575.1 hydrogenase formation HypD protein 1494302 3763518 Suden_1428 Sulfurimonas denitrificans DSM 1251 hydrogenase formation HypD protein YP_393940.1 1493160 R 326298 CDS YP_393941.1 78777626 3763364 complement(1494304..1494594) 1 NC_007575.1 hydrogenase expression/formation protein HupF/HypC 1494594 3763364 Suden_1429 Sulfurimonas denitrificans DSM 1251 hydrogenase expression/formation protein HupF/HypC YP_393941.1 1494304 R 326298 CDS YP_393942.1 78777627 3763365 complement(1494594..1495394) 1 NC_007575.1 hydrogenase nickel incorporation protein HypB 1495394 3763365 Suden_1430 Sulfurimonas denitrificans DSM 1251 hydrogenase nickel incorporation protein HypB YP_393942.1 1494594 R 326298 CDS YP_393943.1 78777628 3763366 complement(1495676..1497904) 1 NC_007575.1 hydrogenase maturation protein HypF 1497904 3763366 Suden_1431 Sulfurimonas denitrificans DSM 1251 hydrogenase maturation protein HypF YP_393943.1 1495676 R 326298 CDS YP_393944.1 78777629 3763367 complement(1497901..1499571) 1 NC_007575.1 hypothetical protein 1499571 3763367 Suden_1432 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393944.1 1497901 R 326298 CDS YP_393945.1 78777630 3763368 complement(1499568..1500113) 1 NC_007575.1 peptidase M52, hydrogenase expression/formation protein 1500113 3763368 Suden_1433 Sulfurimonas denitrificans DSM 1251 peptidase M52, hydrogenase expression/formation protein YP_393945.1 1499568 R 326298 CDS YP_393946.1 78777631 3763369 complement(1500281..1501012) 1 NC_007575.1 nickel-dependent hydrogenase b-type cytochrome subunit 1501012 3763369 Suden_1434 Sulfurimonas denitrificans DSM 1251 nickel-dependent hydrogenase b-type cytochrome subunit YP_393946.1 1500281 R 326298 CDS YP_393947.1 78777632 3763370 complement(1500993..1502726) 1 NC_007575.1 nickel-dependent hydrogenase, large subunit 1502726 3763370 Suden_1435 Sulfurimonas denitrificans DSM 1251 nickel-dependent hydrogenase, large subunit YP_393947.1 1500993 R 326298 CDS YP_393948.1 78777633 3763371 complement(1502736..1503887) 1 NC_007575.1 Ni-Fe hydrogenase, small subunit 1503887 3763371 Suden_1436 Sulfurimonas denitrificans DSM 1251 Ni-Fe hydrogenase, small subunit YP_393948.1 1502736 R 326298 CDS YP_393949.1 78777634 3763372 complement(1504001..1505254) 1 NC_007575.1 nickel-dependent hydrogenase, large subunit 1505254 3763372 Suden_1437 Sulfurimonas denitrificans DSM 1251 nickel-dependent hydrogenase, large subunit YP_393949.1 1504001 R 326298 CDS YP_393950.1 78777635 3763373 complement(1505247..1506128) 1 NC_007575.1 Ni-Fe hydrogenase, small subunit 1506128 3763373 Suden_1438 Sulfurimonas denitrificans DSM 1251 Ni-Fe hydrogenase, small subunit YP_393950.1 1505247 R 326298 CDS YP_393951.1 78777636 3763374 complement(1506131..1506721) 1 NC_007575.1 TetR family transcriptional regulator 1506721 3763374 Suden_1439 Sulfurimonas denitrificans DSM 1251 TetR family transcriptional regulator YP_393951.1 1506131 R 326298 CDS YP_393952.1 78777637 3763375 complement(1506882..1509923) 1 NC_007575.1 resistance-nodulation-cell division family transporter 1509923 3763375 Suden_1440 Sulfurimonas denitrificans DSM 1251 resistance-nodulation-cell division family transporter YP_393952.1 1506882 R 326298 CDS YP_393953.1 78777638 3763376 complement(1509928..1510680) 1 NC_007575.1 efflux transporter 1510680 3763376 Suden_1441 Sulfurimonas denitrificans DSM 1251 efflux transporter YP_393953.1 1509928 R 326298 CDS YP_393954.1 78777639 3763377 complement(1510677..1511903) 1 NC_007575.1 Outer membrane efflux protein 1511903 3763377 Suden_1442 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_393954.1 1510677 R 326298 CDS YP_393955.1 78777640 3763378 complement(1511900..1512274) 1 NC_007575.1 zinc carboxypeptidase-like protein 1512274 3763378 Suden_1443 Sulfurimonas denitrificans DSM 1251 zinc carboxypeptidase-like protein YP_393955.1 1511900 R 326298 CDS YP_393956.1 78777641 3763379 complement(1512285..1512677) 1 NC_007575.1 hypothetical protein 1512677 3763379 Suden_1444 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393956.1 1512285 R 326298 CDS YP_393957.1 78777642 3763380 complement(1512687..1513784) 1 NC_007575.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1513784 3763380 Suden_1445 Sulfurimonas denitrificans DSM 1251 succinyl-diaminopimelate desuccinylase YP_393957.1 1512687 R 326298 CDS YP_393958.1 78777643 3763381 complement(1513845..1516853) 1 NC_007575.1 DNA mismatch repair protein MutS-like protein 1516853 3763381 Suden_1446 Sulfurimonas denitrificans DSM 1251 DNA mismatch repair protein MutS-like protein YP_393958.1 1513845 R 326298 CDS YP_393959.1 78777644 3763345 complement(1517149..1517832) 1 NC_007575.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1517832 3763345 Suden_1447 Sulfurimonas denitrificans DSM 1251 orotidine 5'-phosphate decarboxylase YP_393959.1 1517149 R 326298 CDS YP_393960.1 78777645 3763346 1518159..1518521 1 NC_007575.1 hypothetical protein 1518521 3763346 Suden_1448 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393960.1 1518159 D 326298 CDS YP_393961.1 78777646 3763347 complement(1518563..1519168) 1 NC_007575.1 methyltransferase 1519168 3763347 Suden_1449 Sulfurimonas denitrificans DSM 1251 methyltransferase YP_393961.1 1518563 R 326298 CDS YP_393962.1 78777647 3763348 complement(1519169..1520686) 1 NC_007575.1 hypothetical protein 1520686 3763348 Suden_1450 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393962.1 1519169 R 326298 CDS YP_393963.1 78777648 3763349 complement(1521169..1523124) 1 NC_007575.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1523124 3763349 Suden_1451 Sulfurimonas denitrificans DSM 1251 acetyl-CoA synthetase YP_393963.1 1521169 R 326298 CDS YP_393964.1 78777649 3763350 complement(1523121..1523738) 1 NC_007575.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1523738 3763350 Suden_1452 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit epsilon YP_393964.1 1523121 R 326298 CDS YP_393965.1 78777650 3763351 complement(1523741..1525555) 1 NC_007575.1 cyclic nucleotide-binding protein 1525555 3763351 Suden_1453 Sulfurimonas denitrificans DSM 1251 cyclic nucleotide-binding protein YP_393965.1 1523741 R 326298 CDS YP_393966.1 78777651 3763352 complement(1525600..1527264) 1 NC_007575.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 1527264 actP 3763352 actP Sulfurimonas denitrificans DSM 1251 acetate permease YP_393966.1 1525600 R 326298 CDS YP_393967.1 78777652 3763353 complement(1527264..1527578) 1 NC_007575.1 hypothetical protein 1527578 3763353 Suden_1455 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393967.1 1527264 R 326298 CDS YP_393968.1 78777653 3763354 complement(1527589..1528941) 1 NC_007575.1 hypothetical protein 1528941 3763354 Suden_1456 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393968.1 1527589 R 326298 CDS YP_393969.1 78777654 3763355 1529170..1530048 1 NC_007575.1 hypothetical protein 1530048 3763355 Suden_1457 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393969.1 1529170 D 326298 CDS YP_393970.1 78777655 3763356 complement(1530045..1530701) 1 NC_007575.1 two component transcriptional regulator 1530701 3763356 Suden_1458 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_393970.1 1530045 R 326298 CDS YP_393971.1 78777656 3763357 complement(1530701..1531918) 1 NC_007575.1 histidine kinase 1531918 3763357 Suden_1459 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_393971.1 1530701 R 326298 CDS YP_393972.1 78777657 3763358 1532034..1532534 1 NC_007575.1 peptidyl-prolyl isomerase 1532534 3763358 Suden_1460 Sulfurimonas denitrificans DSM 1251 peptidyl-prolyl isomerase YP_393972.1 1532034 D 326298 CDS YP_393973.1 78777658 3763359 1532584..1533666 1 NC_007575.1 hypothetical protein 1533666 3763359 Suden_1461 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393973.1 1532584 D 326298 CDS YP_393974.1 78777659 3763360 1533715..1534164 1 NC_007575.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1534164 fabZ 3763360 fabZ Sulfurimonas denitrificans DSM 1251 (3R)-hydroxymyristoyl-ACP dehydratase YP_393974.1 1533715 D 326298 CDS YP_393975.1 78777660 3763361 1534164..1534949 1 NC_007575.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1534949 3763361 Suden_1463 Sulfurimonas denitrificans DSM 1251 UDP-N-acetylglucosamine acyltransferase YP_393975.1 1534164 D 326298 CDS YP_393976.1 78777661 3763362 1534946..1536190 1 NC_007575.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1536190 clpX 3763362 clpX Sulfurimonas denitrificans DSM 1251 ATP-dependent protease ATP-binding subunit ClpX YP_393976.1 1534946 D 326298 CDS YP_393977.1 78777662 3763363 1536200..1537237 1 NC_007575.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1537237 3763363 Suden_1465 Sulfurimonas denitrificans DSM 1251 rod shape-determining protein MreB YP_393977.1 1536200 D 326298 CDS YP_393978.1 78777663 3763325 1537230..1537991 1 NC_007575.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1537991 3763325 Suden_1466 Sulfurimonas denitrificans DSM 1251 rod shape-determining protein MreC YP_393978.1 1537230 D 326298 CDS YP_393979.1 78777664 3763326 1538061..1541318 1 NC_007575.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1541318 carB 3763326 carB Sulfurimonas denitrificans DSM 1251 carbamoyl phosphate synthase large subunit YP_393979.1 1538061 D 326298 CDS YP_393980.1 78777665 3763327 1541322..1541753 1 NC_007575.1 hypothetical protein 1541753 3763327 Suden_1468 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393980.1 1541322 D 326298 CDS YP_393981.1 78777666 3763328 1541750..1542190 1 NC_007575.1 hypothetical protein 1542190 3763328 Suden_1469 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393981.1 1541750 D 326298 CDS YP_393982.1 78777667 3763329 1542190..1542795 1 NC_007575.1 hypothetical protein 1542795 3763329 Suden_1470 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393982.1 1542190 D 326298 CDS YP_393983.1 78777668 3763330 1542799..1543977 1 NC_007575.1 glutathionylspermidine synthase 1543977 3763330 Suden_1471 Sulfurimonas denitrificans DSM 1251 glutathionylspermidine synthase YP_393983.1 1542799 D 326298 CDS YP_393984.1 78777669 3763331 complement(1543996..1545204) 1 NC_007575.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 1545204 3763331 Suden_1472 Sulfurimonas denitrificans DSM 1251 glucose-6-phosphate isomerase YP_393984.1 1543996 R 326298 CDS YP_393985.1 78777670 3763332 complement(1545207..1546046) 1 NC_007575.1 UTP-glucose-1-phosphate uridylyltransferase 1546046 3763332 Suden_1473 Sulfurimonas denitrificans DSM 1251 UTP-glucose-1-phosphate uridylyltransferase YP_393985.1 1545207 R 326298 CDS YP_393986.1 78777671 3763333 complement(1546063..1548162) 1 NC_007575.1 oligosaccharyl transferase 1548162 3763333 Suden_1474 Sulfurimonas denitrificans DSM 1251 oligosaccharyl transferase YP_393986.1 1546063 R 326298 CDS YP_393987.1 78777672 3763334 complement(1548176..1549228) 1 NC_007575.1 hypothetical protein 1549228 3763334 Suden_1475 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393987.1 1548176 R 326298 CDS YP_393988.1 78777673 3763335 complement(1549231..1550430) 1 NC_007575.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1550430 3763335 Suden_1476 Sulfurimonas denitrificans DSM 1251 S-adenosylmethionine synthetase YP_393988.1 1549231 R 326298 CDS YP_393989.1 78777674 3763336 complement(1550508..1552070) 1 NC_007575.1 autoinducer-2 (AI-2) kinase 1552070 3763336 Suden_1477 Sulfurimonas denitrificans DSM 1251 autoinducer-2 (AI-2) kinase YP_393989.1 1550508 R 326298 CDS YP_393990.1 78777675 3763337 complement(1552087..1552341) 1 NC_007575.1 hypothetical protein 1552341 3763337 Suden_1478 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393990.1 1552087 R 326298 CDS YP_393991.1 78777676 3763338 complement(1552319..1552636) 1 NC_007575.1 hypothetical protein 1552636 3763338 Suden_1479 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393991.1 1552319 R 326298 CDS YP_393992.1 78777677 3763339 complement(1552835..1553167) 1 NC_007575.1 hypothetical protein 1553167 3763339 Suden_1480 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393992.1 1552835 R 326298 CDS YP_393993.1 78777678 3763340 complement(1553371..1553658) 1 NC_007575.1 antibiotic biosynthesis monooxygenase 1553658 3763340 Suden_1481 Sulfurimonas denitrificans DSM 1251 antibiotic biosynthesis monooxygenase YP_393993.1 1553371 R 326298 CDS YP_393994.1 78777679 3763341 1553745..1556258 1 NC_007575.1 metal dependent phosphohydrolase 1556258 3763341 Suden_1482 Sulfurimonas denitrificans DSM 1251 metal dependent phosphohydrolase YP_393994.1 1553745 D 326298 CDS YP_393995.1 78777680 3763342 1556258..1558072 1 NC_007575.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1558072 3763342 Suden_1483 Sulfurimonas denitrificans DSM 1251 glucosamine--fructose-6-phosphate aminotransferase YP_393995.1 1556258 D 326298 CDS YP_393996.1 78777681 3763343 1558169..1560016 1 NC_007575.1 diguanylate cyclase 1560016 3763343 Suden_1484 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_393996.1 1558169 D 326298 CDS YP_393997.1 78777682 3763344 complement(1560076..1561182) 1 NC_007575.1 hypothetical protein 1561182 3763344 Suden_1485 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_393997.1 1560076 R 326298 CDS YP_393998.1 78777683 3763481 complement(1561270..1562652) 1 NC_007575.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1562652 3763481 Suden_1486 Sulfurimonas denitrificans DSM 1251 thiamine biosynthesis protein ThiC YP_393998.1 1561270 R 326298 CDS YP_393999.1 78777684 3763482 1562799..1563959 1 NC_007575.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1563959 ispDF 3763482 ispDF Sulfurimonas denitrificans DSM 1251 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_393999.1 1562799 D 326298 CDS YP_394000.1 78777685 3763483 1563944..1564843 1 NC_007575.1 response regulator receiver domain-containing protein 1564843 3763483 Suden_1488 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_394000.1 1563944 D 326298 CDS YP_394001.1 78777686 3763484 1564827..1566011 1 NC_007575.1 sulfate adenylyltransferase 1566011 3763484 Suden_1489 Sulfurimonas denitrificans DSM 1251 sulfate adenylyltransferase YP_394001.1 1564827 D 326298 CDS YP_394002.1 78777687 3763485 1566019..1566525 1 NC_007575.1 phosphatidylglycerophosphatase A 1566525 3763485 Suden_1490 Sulfurimonas denitrificans DSM 1251 phosphatidylglycerophosphatase A YP_394002.1 1566019 D 326298 CDS YP_394003.1 78777688 3763486 complement(1566538..1567041) 1 NC_007575.1 hypothetical protein 1567041 3763486 Suden_1491 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394003.1 1566538 R 326298 CDS YP_394004.1 78777689 3763487 complement(1567058..1567855) 1 NC_007575.1 hypothetical protein 1567855 3763487 Suden_1492 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394004.1 1567058 R 326298 CDS YP_394005.1 78777690 3763488 complement(1567852..1568961) 1 NC_007575.1 4Fe-4S ferredoxin 1568961 3763488 Suden_1493 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_394005.1 1567852 R 326298 CDS YP_394006.1 78777691 3763489 complement(1568963..1569580) 1 NC_007575.1 hypothetical protein 1569580 3763489 Suden_1494 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394006.1 1568963 R 326298 CDS YP_394007.1 78777692 3763490 1569830..1570156 1 NC_007575.1 hypothetical protein 1570156 3763490 Suden_1495 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394007.1 1569830 D 326298 CDS YP_394008.1 78777693 3763491 1570241..1572139 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1572139 3763491 Suden_1496 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_394008.1 1570241 D 326298 CDS YP_394009.1 78777694 3763492 complement(1572150..1572518) 1 NC_007575.1 hypothetical protein 1572518 3763492 Suden_1497 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394009.1 1572150 R 326298 CDS YP_394010.1 78777695 3763493 1572569..1572982 1 NC_007575.1 rhodanese-like domain-containing protein 1572982 3763493 Suden_1498 Sulfurimonas denitrificans DSM 1251 rhodanese-like domain-containing protein YP_394010.1 1572569 D 326298 CDS YP_394011.1 78777696 3763494 complement(1572975..1575992) 1 NC_007575.1 resistance-nodulation-cell division family transporter 1575992 3763494 Suden_1499 Sulfurimonas denitrificans DSM 1251 resistance-nodulation-cell division family transporter YP_394011.1 1572975 R 326298 CDS YP_394012.1 78777697 3763495 complement(1576065..1576538) 1 NC_007575.1 hypothetical protein 1576538 3763495 Suden_1500 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394012.1 1576065 R 326298 CDS YP_394013.1 78777698 3763496 1576623..1577333 1 NC_007575.1 hypothetical protein 1577333 3763496 Suden_1501 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394013.1 1576623 D 326298 CDS YP_394014.1 78777699 3763497 complement(1577330..1577533) 1 NC_007575.1 RNA-binding S4 1577533 3763497 Suden_1502 Sulfurimonas denitrificans DSM 1251 RNA-binding S4 YP_394014.1 1577330 R 326298 CDS YP_394015.1 78777700 3763498 complement(1577540..1578082) 1 NC_007575.1 hypothetical protein 1578082 3763498 Suden_1503 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394015.1 1577540 R 326298 CDS YP_394016.1 78777701 3763499 1578310..1578528 1 NC_007575.1 cold-shock DNA-binding domain-containing protein 1578528 3763499 Suden_1504 Sulfurimonas denitrificans DSM 1251 cold-shock DNA-binding domain-containing protein YP_394016.1 1578310 D 326298 CDS YP_394017.1 78777702 3763305 complement(1578596..1579012) 1 NC_007575.1 N-acetyltransferase 1579012 3763305 Suden_1505 Sulfurimonas denitrificans DSM 1251 N-acetyltransferase YP_394017.1 1578596 R 326298 CDS YP_394018.1 78777703 3763306 1579089..1580585 1 NC_007575.1 malate dehydrogenase 1580585 3763306 Suden_1506 Sulfurimonas denitrificans DSM 1251 malate dehydrogenase YP_394018.1 1579089 D 326298 CDS YP_394019.1 78777704 3763307 1580821..1582425 1 NC_007575.1 ABC transporter-like protein 1582425 3763307 Suden_1507 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394019.1 1580821 D 326298 CDS YP_394020.1 78777705 3763308 1582476..1583315 1 NC_007575.1 hypothetical protein 1583315 3763308 Suden_1508 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394020.1 1582476 D 326298 CDS YP_394021.1 78777706 3763309 1583312..1583650 1 NC_007575.1 translation initiation factor SUI1 1583650 3763309 Suden_1509 Sulfurimonas denitrificans DSM 1251 translation initiation factor SUI1 YP_394021.1 1583312 D 326298 CDS YP_394022.1 78777707 3763310 1583771..1585123 1 NC_007575.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1585123 3763310 Suden_1510 Sulfurimonas denitrificans DSM 1251 glutamate dehydrogenase YP_394022.1 1583771 D 326298 CDS YP_394023.1 78777708 3763311 complement(1585127..1586377) 1 NC_007575.1 diguanylate cyclase 1586377 3763311 Suden_1511 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394023.1 1585127 R 326298 CDS YP_394024.1 78777709 3763312 1586498..1587163 1 NC_007575.1 cyclic nucleotide-binding protein 1587163 3763312 Suden_1512 Sulfurimonas denitrificans DSM 1251 cyclic nucleotide-binding protein YP_394024.1 1586498 D 326298 CDS YP_394025.1 78777710 3763313 1587164..1588171 1 NC_007575.1 hypothetical protein 1588171 3763313 Suden_1513 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394025.1 1587164 D 326298 CDS YP_394026.1 78777711 3763314 1588404..1591226 1 NC_007575.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 1591226 3763314 Suden_1514 Sulfurimonas denitrificans DSM 1251 nitrate reductase catalytic subunit YP_394026.1 1588404 D 326298 CDS YP_394027.1 78777712 3763315 1591246..1592070 1 NC_007575.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 1592070 napG 3763315 napG Sulfurimonas denitrificans DSM 1251 quinol dehydrogenase periplasmic component YP_394027.1 1591246 D 326298 CDS YP_394028.1 78777713 3763316 1592067..1592894 1 NC_007575.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 1592894 napH 3763316 napH Sulfurimonas denitrificans DSM 1251 quinol dehydrogenase membrane component YP_394028.1 1592067 D 326298 CDS YP_394029.1 78777714 3763317 1592896..1593606 1 NC_007575.1 periplasmic nitrate reductase 1593606 3763317 Suden_1517 Sulfurimonas denitrificans DSM 1251 periplasmic nitrate reductase YP_394029.1 1592896 D 326298 CDS YP_394030.1 78777715 3763318 1593606..1594088 1 NC_007575.1 periplasmic nitrate reductase maturation protein NapF 1594088 3763318 Suden_1518 Sulfurimonas denitrificans DSM 1251 periplasmic nitrate reductase maturation protein NapF YP_394030.1 1593606 D 326298 CDS YP_394031.1 78777716 3763319 1594088..1595038 1 NC_007575.1 periplasmic nitrate reductase assembly and/or export protein NapL 1595038 3763319 Suden_1519 Sulfurimonas denitrificans DSM 1251 periplasmic nitrate reductase assembly and/or export protein NapL YP_394031.1 1594088 D 326298 CDS YP_394032.1 78777717 3763320 1595058..1595501 1 NC_007575.1 PAS/PAC sensor protein 1595501 3763320 Suden_1520 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_394032.1 1595058 D 326298 CDS YP_394033.1 78777718 3763321 1595532..1595921 1 NC_007575.1 periplasmic nitrate reductase NapD 1595921 3763321 Suden_1521 Sulfurimonas denitrificans DSM 1251 periplasmic nitrate reductase NapD YP_394033.1 1595532 D 326298 CDS YP_394034.1 78777719 3763322 1595925..1596218 1 NC_007575.1 hypothetical protein 1596218 3763322 Suden_1522 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394034.1 1595925 D 326298 CDS YP_394035.1 78777720 3763323 1596224..1596652 1 NC_007575.1 hypothetical protein 1596652 3763323 Suden_1523 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394035.1 1596224 D 326298 CDS YP_394036.1 78777721 3763324 complement(1596699..1597991) 1 NC_007575.1 aminopeptidase 1597991 3763324 Suden_1524 Sulfurimonas denitrificans DSM 1251 aminopeptidase YP_394036.1 1596699 R 326298 CDS YP_394037.1 78777722 3763286 complement(1597988..1598584) 1 NC_007575.1 hypothetical protein 1598584 3763286 Suden_1525 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394037.1 1597988 R 326298 CDS YP_394038.1 78777723 3763287 complement(1598586..1599488) 1 NC_007575.1 hypothetical protein 1599488 3763287 Suden_1526 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394038.1 1598586 R 326298 CDS YP_394039.1 78777724 3763288 complement(1599554..1600294) 1 NC_007575.1 ABC transporter-like protein 1600294 3763288 Suden_1527 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394039.1 1599554 R 326298 CDS YP_394040.1 78777725 3763289 complement(1600294..1601415) 1 NC_007575.1 hypothetical protein 1601415 3763289 Suden_1528 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394040.1 1600294 R 326298 CDS YP_394041.1 78777726 3763290 complement(1601425..1601916) 1 NC_007575.1 chemotaxis protein CheW 1601916 3763290 Suden_1529 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheW YP_394041.1 1601425 R 326298 CDS YP_394042.1 78777727 3763291 complement(1601913..1604324) 1 NC_007575.1 CheA signal transduction histidine kinase 1604324 3763291 Suden_1530 Sulfurimonas denitrificans DSM 1251 CheA signal transduction histidine kinase YP_394042.1 1601913 R 326298 CDS YP_394043.1 78777728 3763292 complement(1604336..1605277) 1 NC_007575.1 response regulator receiver (CheY-like) modulated CheW protein 1605277 3763292 Suden_1531 Sulfurimonas denitrificans DSM 1251 response regulator receiver (CheY-like) modulated CheW protein YP_394043.1 1604336 R 326298 CDS YP_394044.1 78777729 3763293 complement(1605281..1606018) 1 NC_007575.1 metallophosphoesterase 1606018 3763293 Suden_1532 Sulfurimonas denitrificans DSM 1251 metallophosphoesterase YP_394044.1 1605281 R 326298 CDS YP_394045.1 78777730 3763294 complement(1606023..1607027) 1 NC_007575.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1607027 argC 3763294 argC Sulfurimonas denitrificans DSM 1251 N-acetyl-gamma-glutamyl-phosphate reductase YP_394045.1 1606023 R 326298 CDS YP_394046.1 78777731 3763295 complement(1607014..1607511) 1 NC_007575.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1607511 greA 3763295 greA Sulfurimonas denitrificans DSM 1251 transcription elongation factor GreA YP_394046.1 1607014 R 326298 CDS YP_394047.1 78777732 3763296 complement(1607543..1608421) 1 NC_007575.1 UBA/THIF-type NAD/FAD binding fold 1608421 3763296 Suden_1535 Sulfurimonas denitrificans DSM 1251 UBA/THIF-type NAD/FAD binding fold YP_394047.1 1607543 R 326298 CDS YP_394048.1 78777733 3763297 complement(1608425..1609219) 1 NC_007575.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1609219 surE 3763297 surE Sulfurimonas denitrificans DSM 1251 stationary phase survival protein SurE YP_394048.1 1608425 R 326298 CDS YP_394049.1 78777734 3763298 1609463..1610239 1 NC_007575.1 ModE family transcriptional regulator 1610239 3763298 Suden_1537 Sulfurimonas denitrificans DSM 1251 ModE family transcriptional regulator YP_394049.1 1609463 D 326298 CDS YP_394050.1 78777735 3763299 1610468..1611493 1 NC_007575.1 transport system permease 1611493 3763299 Suden_1538 Sulfurimonas denitrificans DSM 1251 transport system permease YP_394050.1 1610468 D 326298 CDS YP_394051.1 78777736 3763300 1611484..1612269 1 NC_007575.1 ABC transporter-like protein 1612269 3763300 Suden_1539 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394051.1 1611484 D 326298 CDS YP_394052.1 78777737 3763301 1612239..1613105 1 NC_007575.1 molybdenum utilization protein ModD 1613105 3763301 Suden_1540 Sulfurimonas denitrificans DSM 1251 molybdenum utilization protein ModD YP_394052.1 1612239 D 326298 CDS YP_394053.1 78777738 3763302 1613102..1614076 1 NC_007575.1 periplasmic binding protein 1614076 3763302 Suden_1541 Sulfurimonas denitrificans DSM 1251 periplasmic binding protein YP_394053.1 1613102 D 326298 CDS YP_394054.1 78777739 3763303 1614078..1614518 1 NC_007575.1 MotA/TolQ/ExbB proton channel 1614518 3763303 Suden_1542 Sulfurimonas denitrificans DSM 1251 MotA/TolQ/ExbB proton channel YP_394054.1 1614078 D 326298 CDS YP_394055.1 78777740 3763304 1614515..1614922 1 NC_007575.1 biopolymer transport protein ExbD/TolR 1614922 3763304 Suden_1543 Sulfurimonas denitrificans DSM 1251 biopolymer transport protein ExbD/TolR YP_394055.1 1614515 D 326298 CDS YP_394056.1 78777741 3763266 1614925..1615671 1 NC_007575.1 TonB-like protein 1615671 3763266 Suden_1544 Sulfurimonas denitrificans DSM 1251 TonB-like protein YP_394056.1 1614925 D 326298 CDS YP_394057.1 78777742 3763267 1615684..1616859 1 NC_007575.1 PAS/PAC sensor protein 1616859 3763267 Suden_1545 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_394057.1 1615684 D 326298 CDS YP_394058.1 78777743 3763268 1616921..1617571 1 NC_007575.1 generic methyltransferase 1617571 3763268 Suden_1546 Sulfurimonas denitrificans DSM 1251 generic methyltransferase YP_394058.1 1616921 D 326298 CDS YP_394059.1 78777744 3763269 1617586..1619586 1 NC_007575.1 TonB-dependent receptor, plug 1619586 3763269 Suden_1547 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor, plug YP_394059.1 1617586 D 326298 CDS YP_394060.1 78777745 3763270 1619673..1620086 1 NC_007575.1 molybdenum-pterin-binding protein 1620086 3763270 Suden_1548 Sulfurimonas denitrificans DSM 1251 molybdenum-pterin-binding protein YP_394060.1 1619673 D 326298 CDS YP_394061.1 78777746 3763271 1620112..1622082 1 NC_007575.1 TonB-dependent receptor 1622082 3763271 Suden_1549 Sulfurimonas denitrificans DSM 1251 TonB-dependent receptor YP_394061.1 1620112 D 326298 CDS YP_394062.1 78777747 3763272 1622092..1622919 1 NC_007575.1 hypothetical protein 1622919 3763272 Suden_1550 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394062.1 1622092 D 326298 CDS YP_394063.1 78777748 3763273 1622967..1623527 1 NC_007575.1 hypothetical protein 1623527 3763273 Suden_1551 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394063.1 1622967 D 326298 CDS YP_394064.1 78777749 3763274 1623691..1624389 1 NC_007575.1 hypothetical protein 1624389 3763274 Suden_1552 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394064.1 1623691 D 326298 CDS YP_394065.1 78777750 3763275 1625005..1626348 1 NC_007575.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1626348 rho 3763275 rho Sulfurimonas denitrificans DSM 1251 transcription termination factor Rho YP_394065.1 1625005 D 326298 CDS YP_394066.1 78777751 3763276 1626442..1627185 1 NC_007575.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1627185 3763276 Suden_1554 Sulfurimonas denitrificans DSM 1251 glutamate racemase YP_394066.1 1626442 D 326298 CDS YP_394067.1 78777752 3763277 1627186..1629651 1 NC_007575.1 CheA signal transduction histidine kinases 1629651 3763277 Suden_1555 Sulfurimonas denitrificans DSM 1251 CheA signal transduction histidine kinases YP_394067.1 1627186 D 326298 CDS YP_394068.1 78777753 3763278 1629648..1630025 1 NC_007575.1 response regulator receiver domain-containing protein 1630025 3763278 Suden_1556 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_394068.1 1629648 D 326298 CDS YP_394069.1 78777754 3763279 1630191..1631822 1 NC_007575.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1631822 3763279 Suden_1557 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunits gamma and tau YP_394069.1 1630191 D 326298 CDS YP_394070.1 78777755 3763280 complement(1631819..1633213) 1 NC_007575.1 histidine kinase 1633213 3763280 Suden_1558 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_394070.1 1631819 R 326298 CDS YP_394071.1 78777756 3763281 complement(1633207..1633881) 1 NC_007575.1 two component transcriptional regulator 1633881 3763281 Suden_1559 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_394071.1 1633207 R 326298 CDS YP_394072.1 78777757 3763282 1633981..1634439 1 NC_007575.1 hypothetical protein 1634439 3763282 Suden_1560 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394072.1 1633981 D 326298 CDS YP_394073.1 78777758 3763283 complement(1634436..1635245) 1 NC_007575.1 metallophosphoesterase 1635245 3763283 Suden_1561 Sulfurimonas denitrificans DSM 1251 metallophosphoesterase YP_394073.1 1634436 R 326298 CDS YP_394074.1 78777759 3763284 complement(1635274..1635945) 1 NC_007575.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1635945 3763284 Suden_1562 Sulfurimonas denitrificans DSM 1251 uracil-DNA glycosylase YP_394074.1 1635274 R 326298 CDS YP_394075.1 78777760 3763285 complement(1636226..1637248) 1 NC_007575.1 hypothetical protein 1637248 3763285 Suden_1563 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394075.1 1636226 R 326298 CDS YP_394076.1 78777761 3763158 complement(1637390..1638163) 1 NC_007575.1 hypothetical protein 1638163 3763158 Suden_1564 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394076.1 1637390 R 326298 CDS YP_394077.1 78777762 3763159 complement(1638160..1639146) 1 NC_007575.1 DNA (cytosine-5-)-methyltransferase 1639146 3763159 Suden_1565 Sulfurimonas denitrificans DSM 1251 DNA (cytosine-5-)-methyltransferase YP_394077.1 1638160 R 326298 CDS YP_394078.1 78777763 3763160 complement(1639261..1642233) 1 NC_007575.1 transcription-repair coupling factor 1642233 3763160 Suden_1566 Sulfurimonas denitrificans DSM 1251 transcription-repair coupling factor YP_394078.1 1639261 R 326298 CDS YP_394079.1 78777764 3763161 complement(1642253..1642609) 1 NC_007575.1 hypothetical protein 1642609 3763161 Suden_1567 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394079.1 1642253 R 326298 CDS YP_394080.1 78777765 3763162 complement(1642609..1643562) 1 NC_007575.1 peptidase M23B 1643562 3763162 Suden_1568 Sulfurimonas denitrificans DSM 1251 peptidase M23B YP_394080.1 1642609 R 326298 CDS YP_394081.1 78777766 3763163 complement(1643555..1644703) 1 NC_007575.1 folylpolyglutamate synthetase 1644703 3763163 Suden_1569 Sulfurimonas denitrificans DSM 1251 folylpolyglutamate synthetase YP_394081.1 1643555 R 326298 CDS YP_394082.1 78777767 3763164 complement(1644700..1646250) 1 NC_007575.1 diguanylate cyclase 1646250 3763164 Suden_1570 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394082.1 1644700 R 326298 CDS YP_394083.1 78777768 3763165 complement(1646260..1646784) 1 NC_007575.1 hypothetical protein 1646784 3763165 Suden_1571 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394083.1 1646260 R 326298 CDS YP_394084.1 78777769 3763166 complement(1646787..1649255) 1 NC_007575.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1649255 leuS 3763166 leuS Sulfurimonas denitrificans DSM 1251 leucyl-tRNA synthetase YP_394084.1 1646787 R 326298 CDS YP_394085.1 78777770 3763167 complement(1649265..1649603) 1 NC_007575.1 hypothetical protein 1649603 3763167 Suden_1573 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394085.1 1649265 R 326298 CDS YP_394086.1 78777771 3763168 complement(1649708..1650679) 1 NC_007575.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1650679 secF 3763168 secF Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecF YP_394086.1 1649708 R 326298 CDS YP_394087.1 78777772 3763169 complement(1650682..1652247) 1 NC_007575.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1652247 secD 3763169 secD Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecD YP_394087.1 1650682 R 326298 CDS YP_394088.1 78777773 3763170 complement(1652237..1652503) 1 NC_007575.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1652503 yajC 3763170 yajC Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit YajC YP_394088.1 1652237 R 326298 CDS YP_394089.1 78777774 3763171 1652608..1653846 1 NC_007575.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1653846 3763171 Suden_1577 Sulfurimonas denitrificans DSM 1251 apolipoprotein N-acyltransferase YP_394089.1 1652608 D 326298 CDS YP_394090.1 78777775 3763172 1653941..1656043 1 NC_007575.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1656043 3763172 Suden_1578 Sulfurimonas denitrificans DSM 1251 polyphosphate kinase YP_394090.1 1653941 D 326298 CDS YP_394091.1 78777776 3763173 1656045..1656572 1 NC_007575.1 hexapaptide repeat-containing transferase 1656572 3763173 Suden_1579 Sulfurimonas denitrificans DSM 1251 hexapaptide repeat-containing transferase YP_394091.1 1656045 D 326298 CDS YP_394092.1 78777777 3763174 1656573..1657184 1 NC_007575.1 hypothetical protein 1657184 3763174 Suden_1580 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394092.1 1656573 D 326298 CDS YP_394093.1 78777778 3763175 complement(1657176..1658381) 1 NC_007575.1 metallo-beta-lactamase/flavodoxin domain-containing protein 1658381 3763175 Suden_1581 Sulfurimonas denitrificans DSM 1251 metallo-beta-lactamase/flavodoxin domain-containing protein YP_394093.1 1657176 R 326298 CDS YP_394094.1 78777779 3763176 complement(1658390..1658554) 1 NC_007575.1 rubredoxin-type Fe(Cys)4 protein 1658554 3763176 Suden_1582 Sulfurimonas denitrificans DSM 1251 rubredoxin-type Fe(Cys)4 protein YP_394094.1 1658390 R 326298 CDS YP_394095.1 78777780 3763138 complement(1658665..1659045) 1 NC_007575.1 hypothetical protein 1659045 3763138 Suden_1583 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394095.1 1658665 R 326298 CDS YP_394096.1 78777781 3763139 complement(1659042..1660829) 1 NC_007575.1 hypothetical protein 1660829 3763139 Suden_1584 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394096.1 1659042 R 326298 CDS YP_394097.1 78777782 3763140 complement(1660826..1662019) 1 NC_007575.1 cytochrome-c peroxidase 1662019 3763140 Suden_1585 Sulfurimonas denitrificans DSM 1251 cytochrome-c peroxidase YP_394097.1 1660826 R 326298 CDS YP_394098.1 78777783 3763141 complement(1662020..1662835) 1 NC_007575.1 short-chain dehydrogenase 1662835 3763141 Suden_1586 Sulfurimonas denitrificans DSM 1251 short-chain dehydrogenase YP_394098.1 1662020 R 326298 CDS YP_394099.1 78777784 3763142 complement(1663088..1664740) 1 NC_007575.1 hypothetical protein 1664740 3763142 Suden_1587 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394099.1 1663088 R 326298 CDS YP_394100.1 78777785 3763143 complement(1664737..1666134) 1 NC_007575.1 hypothetical protein 1666134 3763143 Suden_1588 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394100.1 1664737 R 326298 CDS YP_394101.1 78777786 3763144 1666427..1667074 1 NC_007575.1 hypothetical protein 1667074 3763144 Suden_1589 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394101.1 1666427 D 326298 CDS YP_394102.1 78777787 3763145 1667067..1668923 1 NC_007575.1 integrase catalytic subunit 1668923 3763145 Suden_1590 Sulfurimonas denitrificans DSM 1251 integrase catalytic subunit YP_394102.1 1667067 D 326298 CDS YP_394103.1 78777788 3763146 1668927..1669868 1 NC_007575.1 TniB protein 1669868 3763146 Suden_1591 Sulfurimonas denitrificans DSM 1251 TniB protein YP_394103.1 1668927 D 326298 CDS YP_394104.1 78777789 3763147 1669865..1671001 1 NC_007575.1 hypothetical protein 1671001 3763147 Suden_1592 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394104.1 1669865 D 326298 CDS YP_394105.1 78777790 3763148 complement(1671012..1671368) 1 NC_007575.1 transposase 1671368 3763148 Suden_1593 Sulfurimonas denitrificans DSM 1251 transposase YP_394105.1 1671012 R 326298 CDS YP_394106.1 78777791 3763149 1671542..1673134 1 NC_007575.1 N-6 DNA methylase 1673134 3763149 Suden_1594 Sulfurimonas denitrificans DSM 1251 N-6 DNA methylase YP_394106.1 1671542 D 326298 CDS YP_394107.1 78777792 3763150 1673135..1673518 1 NC_007575.1 hypothetical protein 1673518 3763150 Suden_1595 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394107.1 1673135 D 326298 CDS YP_394108.1 78777793 3763151 1673560..1674564 1 NC_007575.1 hypothetical protein 1674564 3763151 Suden_1596 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394108.1 1673560 D 326298 CDS YP_394109.1 78777794 3763152 1674567..1676711 1 NC_007575.1 ATPase 1676711 3763152 Suden_1597 Sulfurimonas denitrificans DSM 1251 ATPase YP_394109.1 1674567 D 326298 CDS YP_394110.1 78777795 3763153 1676818..1678905 1 NC_007575.1 hypothetical protein 1678905 3763153 Suden_1598 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394110.1 1676818 D 326298 CDS YP_394111.1 78777796 3763154 complement(1678895..1680571) 1 NC_007575.1 hypothetical protein 1680571 3763154 Suden_1599 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394111.1 1678895 R 326298 CDS YP_394112.1 78777797 3763155 complement(1680632..1681810) 1 NC_007575.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1681810 argJ 3763155 argJ Sulfurimonas denitrificans DSM 1251 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_394112.1 1680632 R 326298 CDS YP_394113.1 78777798 3763156 complement(1681803..1682939) 1 NC_007575.1 hypothetical protein 1682939 3763156 Suden_1601 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394113.1 1681803 R 326298 CDS YP_394114.1 78777799 3763157 complement(1682958..1683146) 1 NC_007575.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1683146 rpmB 3763157 rpmB Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L28 YP_394114.1 1682958 R 326298 CDS YP_394115.1 78777800 3763230 1683294..1684091 1 NC_007575.1 signal transduction protein 1684091 3763230 Suden_1603 Sulfurimonas denitrificans DSM 1251 signal transduction protein YP_394115.1 1683294 D 326298 CDS YP_394116.1 78777801 3763231 1684088..1685482 1 NC_007575.1 chemotaxis protein CheC 1685482 3763231 Suden_1604 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheC YP_394116.1 1684088 D 326298 CDS YP_394117.1 78777802 3763232 1685526..1686167 1 NC_007575.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1686167 3763232 Suden_1605 Sulfurimonas denitrificans DSM 1251 ribulose-phosphate 3-epimerase YP_394117.1 1685526 D 326298 CDS YP_394118.1 78777803 3763233 1686170..1686754 1 NC_007575.1 phosphoribosylanthranilate isomerase 1686754 3763233 Suden_1606 Sulfurimonas denitrificans DSM 1251 phosphoribosylanthranilate isomerase YP_394118.1 1686170 D 326298 CDS YP_394119.1 78777804 3763234 1686761..1687561 1 NC_007575.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1687561 3763234 Suden_1607 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit epsilon YP_394119.1 1686761 D 326298 CDS YP_394120.1 78777805 3763235 complement(1687564..1688499) 1 NC_007575.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1688499 3763235 Suden_1608 Sulfurimonas denitrificans DSM 1251 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_394120.1 1687564 R 326298 CDS YP_394121.1 78777806 3763236 complement(1688516..1689733) 1 NC_007575.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1689733 3763236 Suden_1609 Sulfurimonas denitrificans DSM 1251 3-oxoacyl-ACP synthase YP_394121.1 1688516 R 326298 CDS YP_394122.1 78777807 3763237 complement(1689834..1690106) 1 NC_007575.1 acyl carrier protein 1690106 3763237 Suden_1610 Sulfurimonas denitrificans DSM 1251 acyl carrier protein YP_394122.1 1689834 R 326298 CDS YP_394123.1 78777808 3763238 complement(1690229..1691566) 1 NC_007575.1 deoxyribodipyrimidine photolyase 1691566 3763238 Suden_1611 Sulfurimonas denitrificans DSM 1251 deoxyribodipyrimidine photolyase YP_394123.1 1690229 R 326298 CDS YP_394124.1 78777809 3763239 complement(1691574..1692521) 1 NC_007575.1 hypothetical protein 1692521 3763239 Suden_1612 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394124.1 1691574 R 326298 CDS YP_394125.1 78777810 3763240 complement(1692563..1693309) 1 NC_007575.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1693309 fabG 3763240 fabG Sulfurimonas denitrificans DSM 1251 3-ketoacyl-ACP reductase YP_394125.1 1692563 R 326298 CDS YP_394126.1 78777811 3763241 complement(1693328..1694803) 1 NC_007575.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1694803 3763241 Suden_1614 Sulfurimonas denitrificans DSM 1251 phosphoglyceromutase YP_394126.1 1693328 R 326298 CDS YP_394127.1 78777812 3763242 1694877..1695938 1 NC_007575.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1695938 mraY 3763242 mraY Sulfurimonas denitrificans DSM 1251 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_394127.1 1694877 D 326298 CDS YP_394128.1 78777813 3763243 1695938..1697143 1 NC_007575.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1697143 murD 3763243 murD Sulfurimonas denitrificans DSM 1251 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_394128.1 1695938 D 326298 CDS YP_394129.1 78777814 3763244 1697140..1697697 1 NC_007575.1 Formyl transferase-like 1697697 3763244 Suden_1617 Sulfurimonas denitrificans DSM 1251 Formyl transferase-like YP_394129.1 1697140 D 326298 CDS YP_394130.1 78777815 3763177 1698097..1698549 1 NC_007575.1 Phage integrase 1698549 3763177 Suden_1618 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_394130.1 1698097 D 326298 CDS YP_394131.1 78777816 3763178 complement(1698890..1699072) 1 NC_007575.1 hypothetical protein 1699072 3763178 Suden_1619 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394131.1 1698890 R 326298 CDS YP_394132.1 78777817 3763179 complement(1699121..1699459) 1 NC_007575.1 hypothetical protein 1699459 3763179 Suden_1620 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394132.1 1699121 R 326298 CDS YP_394133.1 78777818 3763180 complement(1699689..1701197) 1 NC_007575.1 hypothetical protein 1701197 3763180 Suden_1621 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394133.1 1699689 R 326298 CDS YP_394134.1 78777819 3763181 complement(1701208..1704546) 1 NC_007575.1 exonuclease V subunit alpha 1704546 3763181 Suden_1622 Sulfurimonas denitrificans DSM 1251 exonuclease V subunit alpha YP_394134.1 1701208 R 326298 CDS YP_394135.1 78777820 3763182 complement(1704574..1705317) 1 NC_007575.1 Phage anti-repressor protein-like protein 1705317 3763182 Suden_1623 Sulfurimonas denitrificans DSM 1251 Phage anti-repressor protein-like protein YP_394135.1 1704574 R 326298 CDS YP_394136.1 78777821 3763183 complement(1705556..1705873) 1 NC_007575.1 hypothetical protein 1705873 3763183 Suden_1624 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394136.1 1705556 R 326298 CDS YP_394137.1 78777822 3763184 complement(1705882..1706637) 1 NC_007575.1 hypothetical protein 1706637 3763184 Suden_1625 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394137.1 1705882 R 326298 CDS YP_394138.1 78777823 3763185 complement(1706653..1707480) 1 NC_007575.1 hypothetical protein 1707480 3763185 Suden_1626 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394138.1 1706653 R 326298 CDS YP_394139.1 78777824 3763186 complement(1707615..1710395) 1 NC_007575.1 hypothetical protein 1710395 3763186 Suden_1627 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394139.1 1707615 R 326298 CDS YP_394140.1 78777825 3763187 complement(1710399..1711124) 1 NC_007575.1 hypothetical protein 1711124 3763187 Suden_1628 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394140.1 1710399 R 326298 CDS YP_394141.1 78777826 3763188 complement(1711290..1711784) 1 NC_007575.1 hypothetical protein 1711784 3763188 Suden_1629 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394141.1 1711290 R 326298 CDS YP_394142.1 78777827 3763189 complement(1712543..1713274) 1 NC_007575.1 hypothetical protein 1713274 3763189 Suden_1630 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394142.1 1712543 R 326298 CDS YP_394143.1 78777828 3763190 complement(1713419..1713661) 1 NC_007575.1 hypothetical protein 1713661 3763190 Suden_1631 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394143.1 1713419 R 326298 CDS YP_394144.1 78777829 3763191 1713814..1714287 1 NC_007575.1 hypothetical protein 1714287 3763191 Suden_1632 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394144.1 1713814 D 326298 CDS YP_394145.1 78777830 3763192 complement(1714292..1715398) 1 NC_007575.1 Phage integrase 1715398 3763192 Suden_1633 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_394145.1 1714292 R 326298 CDS YP_394146.1 78777831 3763193 complement(1715398..1715982) 1 NC_007575.1 hypothetical protein 1715982 3763193 Suden_1634 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394146.1 1715398 R 326298 CDS YP_394147.1 78777832 3763194 complement(1716570..1717007) 1 NC_007575.1 cytosine deaminase 1717007 3763194 Suden_1635 Sulfurimonas denitrificans DSM 1251 cytosine deaminase YP_394147.1 1716570 R 326298 CDS YP_394148.1 78777833 3763247 1717576..1718502 1 NC_007575.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1718502 3763247 Suden_1636 Sulfurimonas denitrificans DSM 1251 ribose-phosphate pyrophosphokinase YP_394148.1 1717576 D 326298 CDS YP_394149.1 78777834 3763248 1718516..1720306 1 NC_007575.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1720306 3763248 Suden_1637 Sulfurimonas denitrificans DSM 1251 GTP-binding protein LepA YP_394149.1 1718516 D 326298 CDS YP_394150.1 78777835 3763249 1720320..1720895 1 NC_007575.1 transformation system protein 1720895 3763249 Suden_1638 Sulfurimonas denitrificans DSM 1251 transformation system protein YP_394150.1 1720320 D 326298 CDS YP_394151.1 78777836 3763250 1720943..1722805 1 NC_007575.1 Outer membrane cobalamin receptor protein-like protein 1722805 3763250 Suden_1639 Sulfurimonas denitrificans DSM 1251 Outer membrane cobalamin receptor protein-like protein YP_394151.1 1720943 D 326298 CDS YP_394152.1 78777837 3763251 1722806..1723237 1 NC_007575.1 hypothetical protein 1723237 3763251 Suden_1640 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394152.1 1722806 D 326298 CDS YP_394153.1 78777838 3763252 1723231..1725153 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 1725153 3763252 Suden_1641 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_394153.1 1723231 D 326298 CDS YP_394154.1 78777839 3763253 complement(1725137..1727134) 1 NC_007575.1 hypothetical protein 1727134 3763253 Suden_1642 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394154.1 1725137 R 326298 CDS YP_394155.1 78777840 3763254 1727315..1727872 1 NC_007575.1 heat shock protein GrpE 1727872 3763254 Suden_1643 Sulfurimonas denitrificans DSM 1251 heat shock protein GrpE YP_394155.1 1727315 D 326298 CDS YP_394156.1 78777841 3763255 1728033..1729919 1 NC_007575.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1729919 dnaK 3763255 dnaK Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaK YP_394156.1 1728033 D 326298 CDS YP_394157.1 78777842 3763256 1729990..1730982 1 NC_007575.1 hypothetical protein 1730982 3763256 Suden_1645 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394157.1 1729990 D 326298 CDS YP_394158.1 78777843 3763257 1731105..1732847 1 NC_007575.1 diguanylate cyclase 1732847 3763257 Suden_1646 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394158.1 1731105 D 326298 CDS YP_394159.1 78777844 3763258 complement(1732864..1734006) 1 NC_007575.1 dihydropteroate synthase 1734006 3763258 Suden_1647 Sulfurimonas denitrificans DSM 1251 dihydropteroate synthase YP_394159.1 1732864 R 326298 CDS YP_394160.1 78777845 3763259 complement(1733996..1734625) 1 NC_007575.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1734625 3763259 Suden_1648 Sulfurimonas denitrificans DSM 1251 DNA polymerase III subunit delta' YP_394160.1 1733996 R 326298 CDS YP_394161.1 78777846 3763260 complement(1734612..1735160) 1 NC_007575.1 hypothetical protein 1735160 3763260 Suden_1649 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394161.1 1734612 R 326298 CDS YP_394162.1 78777847 3763261 complement(1735240..1736451) 1 NC_007575.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1736451 3763261 Suden_1650 Sulfurimonas denitrificans DSM 1251 aspartate kinase YP_394162.1 1735240 R 326298 CDS YP_394163.1 78777848 3763262 complement(1736452..1736922) 1 NC_007575.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1736922 3763262 Suden_1651 Sulfurimonas denitrificans DSM 1251 dinucleoside polyphosphate hydrolase YP_394163.1 1736452 R 326298 CDS YP_394164.1 78777849 3763263 1737044..1737427 1 NC_007575.1 PAS/PAC sensor protein 1737427 3763263 Suden_1652 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_394164.1 1737044 D 326298 CDS YP_394165.1 78777850 3763264 1737436..1738554 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 1738554 3763264 Suden_1653 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_394165.1 1737436 D 326298 CDS YP_394166.1 78777851 3763265 1738626..1739678 1 NC_007575.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1739678 3763265 Suden_1654 Sulfurimonas denitrificans DSM 1251 coproporphyrinogen III oxidase YP_394166.1 1738626 D 326298 CDS YP_394167.1 78777852 3762869 1739731..1740156 1 NC_007575.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 1740156 3762869 Suden_1655 Sulfurimonas denitrificans DSM 1251 sec-independent translocase YP_394167.1 1739731 D 326298 CDS YP_394168.1 78777853 3762870 1740149..1740961 1 NC_007575.1 Sec-independent periplasmic protein translocase 1740961 3762870 Suden_1656 Sulfurimonas denitrificans DSM 1251 Sec-independent periplasmic protein translocase YP_394168.1 1740149 D 326298 CDS YP_394169.1 78777854 3762871 1740963..1741991 1 NC_007575.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1741991 queA 3762871 queA Sulfurimonas denitrificans DSM 1251 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_394169.1 1740963 D 326298 CDS YP_394170.1 78777855 3762872 complement(1741986..1742762) 1 NC_007575.1 SMF protein 1742762 3762872 Suden_1658 Sulfurimonas denitrificans DSM 1251 SMF protein YP_394170.1 1741986 R 326298 CDS YP_394171.1 78777856 3762873 complement(1742766..1743860) 1 NC_007575.1 hypothetical protein 1743860 3762873 Suden_1659 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394171.1 1742766 R 326298 CDS YP_394172.1 78777857 3762874 1744060..1744473 1 NC_007575.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1744473 rpsF 3762874 rpsF Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S6 YP_394172.1 1744060 D 326298 CDS YP_394173.1 78777858 3762875 1744525..1745043 1 NC_007575.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1745043 3762875 Suden_1661 Sulfurimonas denitrificans DSM 1251 single-stranded DNA-binding protein YP_394173.1 1744525 D 326298 CDS YP_394174.1 78777859 3762876 1745070..1745333 1 NC_007575.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1745333 rpsR 3762876 rpsR Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S18 YP_394174.1 1745070 D 326298 CDS YP_394175.1 78777860 3762877 1745444..1747171 1 NC_007575.1 hypothetical protein 1747171 3762877 Suden_1663 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394175.1 1745444 D 326298 CDS YP_394176.1 78777861 3762878 complement(1747179..1747499) 1 NC_007575.1 hypothetical protein 1747499 3762878 Suden_1664 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394176.1 1747179 R 326298 CDS YP_394177.1 78777862 3762879 complement(1747499..1748122) 1 NC_007575.1 phosphoserine phosphatase SerB 1748122 3762879 Suden_1665 Sulfurimonas denitrificans DSM 1251 phosphoserine phosphatase SerB YP_394177.1 1747499 R 326298 CDS YP_394178.1 78777863 3762880 1748177..1749088 1 NC_007575.1 methylenetetrahydrofolate reductase 1749088 3762880 Suden_1666 Sulfurimonas denitrificans DSM 1251 methylenetetrahydrofolate reductase YP_394178.1 1748177 D 326298 CDS YP_394179.1 78777864 3762881 1749101..1750348 1 NC_007575.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1750348 3762881 Suden_1667 Sulfurimonas denitrificans DSM 1251 seryl-tRNA synthetase YP_394179.1 1749101 D 326298 CDS YP_394180.1 78777865 3762882 1750399..1752738 1 NC_007575.1 hypothetical protein 1752738 3762882 Suden_1668 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394180.1 1750399 D 326298 CDS YP_394181.1 78777866 3762883 complement(1752745..1753398) 1 NC_007575.1 phosphatidylserine decarboxylase 1753398 3762883 Suden_1669 Sulfurimonas denitrificans DSM 1251 phosphatidylserine decarboxylase YP_394181.1 1752745 R 326298 CDS YP_394182.1 78777867 3762884 complement(1753388..1755379) 1 NC_007575.1 peptidase M41, FtsH 1755379 3762884 Suden_1670 Sulfurimonas denitrificans DSM 1251 peptidase M41, FtsH YP_394182.1 1753388 R 326298 CDS YP_394183.1 78777868 3762885 complement(1755382..1756215) 1 NC_007575.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1756215 prmA 3762885 prmA Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L11 methyltransferase YP_394183.1 1755382 R 326298 CDS YP_394184.1 78777869 3762886 complement(1756215..1756589) 1 NC_007575.1 response regulator receiver domain-containing protein 1756589 3762886 Suden_1672 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_394184.1 1756215 R 326298 CDS YP_394185.1 78777870 3762887 complement(1756670..1757380) 1 NC_007575.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1757380 3762887 Suden_1673 Sulfurimonas denitrificans DSM 1251 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_394185.1 1756670 R 326298 CDS YP_394186.1 78777871 3762888 complement(1757377..1758000) 1 NC_007575.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1758000 hisH 3762888 hisH Sulfurimonas denitrificans DSM 1251 imidazole glycerol phosphate synthase subunit HisH YP_394186.1 1757377 R 326298 CDS YP_394187.1 78777872 3762889 complement(1757997..1758902) 1 NC_007575.1 hypothetical protein 1758902 3762889 Suden_1675 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394187.1 1757997 R 326298 CDS YP_394188.1 78777873 3762890 1759022..1759912 1 NC_007575.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 1759912 3762890 Suden_1676 Sulfurimonas denitrificans DSM 1251 lipid A biosynthesis lauroyl acyltransferase YP_394188.1 1759022 D 326298 CDS YP_394189.1 78777874 3762891 complement(1759909..1760901) 1 NC_007575.1 hypothetical protein 1760901 3762891 Suden_1677 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394189.1 1759909 R 326298 CDS YP_394190.1 78777875 3762892 complement(1760949..1761962) 1 NC_007575.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1761962 ruvB 3762892 ruvB Sulfurimonas denitrificans DSM 1251 Holliday junction DNA helicase RuvB YP_394190.1 1760949 R 326298 CDS YP_394191.1 78777876 3762893 complement(1761971..1762762) 1 NC_007575.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1762762 panB 3762893 panB Sulfurimonas denitrificans DSM 1251 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_394191.1 1761971 R 326298 CDS YP_394192.1 78777877 3762894 1762839..1763243 1 NC_007575.1 CheA signal transduction histidine kinase 1763243 3762894 Suden_1680 Sulfurimonas denitrificans DSM 1251 CheA signal transduction histidine kinase YP_394192.1 1762839 D 326298 CDS YP_394193.1 78777878 3762895 1763240..1763980 1 NC_007575.1 tryptophan synthase 1763980 3762895 Suden_1681 Sulfurimonas denitrificans DSM 1251 tryptophan synthase YP_394193.1 1763240 D 326298 CDS YP_394194.1 78777879 3762897 complement(1764160..1764378) 1 NC_007575.1 hypothetical protein 1764378 3762897 Suden_1682 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394194.1 1764160 R 326298 CDS YP_394195.1 78777880 3762898 complement(1764381..1764608) 1 NC_007575.1 hypothetical protein 1764608 3762898 Suden_1683 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394195.1 1764381 R 326298 CDS YP_394196.1 78777881 3762899 1764788..1765555 1 NC_007575.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1765555 3762899 Suden_1684 Sulfurimonas denitrificans DSM 1251 gamma-glutamyl kinase YP_394196.1 1764788 D 326298 CDS YP_394197.1 78777882 3762900 complement(1765594..1765836) 1 NC_007575.1 hypothetical protein 1765836 3762900 Suden_1685 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394197.1 1765594 R 326298 CDS YP_394198.1 78777883 3762901 1766058..1766483 1 NC_007575.1 hypothetical protein 1766483 3762901 Suden_1686 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394198.1 1766058 D 326298 CDS YP_394199.1 78777884 3762902 1766501..1767433 1 NC_007575.1 S6 modification enzyme RimK 1767433 3762902 Suden_1687 Sulfurimonas denitrificans DSM 1251 S6 modification enzyme RimK YP_394199.1 1766501 D 326298 CDS YP_394200.1 78777885 3762903 1767434..1768486 1 NC_007575.1 succinylglutamate desuccinylase/aspartoacylase 1768486 3762903 Suden_1688 Sulfurimonas denitrificans DSM 1251 succinylglutamate desuccinylase/aspartoacylase YP_394200.1 1767434 D 326298 CDS YP_394201.1 78777886 3762904 1768489..1769520 1 NC_007575.1 peptidase M42 1769520 3762904 Suden_1689 Sulfurimonas denitrificans DSM 1251 peptidase M42 YP_394201.1 1768489 D 326298 CDS YP_394202.1 78777887 3762905 1769535..1770965 1 NC_007575.1 MscS mechanosensitive ion channel 1770965 3762905 Suden_1690 Sulfurimonas denitrificans DSM 1251 MscS mechanosensitive ion channel YP_394202.1 1769535 D 326298 CDS YP_394203.1 78777888 3762906 1770982..1771764 1 NC_007575.1 Mg2+ transporter protein, CorA-like 1771764 3762906 Suden_1691 Sulfurimonas denitrificans DSM 1251 Mg2+ transporter protein, CorA-like YP_394203.1 1770982 D 326298 CDS YP_394204.1 78777889 3762640 1772124..1772996 1 NC_007575.1 radical SAM family protein 1772996 3762640 Suden_1692 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_394204.1 1772124 D 326298 CDS YP_394205.1 78777890 3762641 complement(1772985..1773362) 1 NC_007575.1 hypothetical protein 1773362 3762641 Suden_1693 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394205.1 1772985 R 326298 CDS YP_394206.1 78777891 3762642 1773781..1775763 1 NC_007575.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1775763 3762642 Suden_1694 Sulfurimonas denitrificans DSM 1251 excinuclease ABC subunit B YP_394206.1 1773781 D 326298 CDS YP_394207.1 78777892 3762643 1775770..1776342 1 NC_007575.1 hypothetical protein 1776342 3762643 Suden_1695 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394207.1 1775770 D 326298 CDS YP_394208.1 78777893 3762644 complement(1776356..1777942) 1 NC_007575.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1777942 3762644 Suden_1696 Sulfurimonas denitrificans DSM 1251 phosphoenolpyruvate carboxykinase YP_394208.1 1776356 R 326298 CDS YP_394209.1 78777894 3762647 complement(1778597..1778824) 1 NC_007575.1 hypothetical protein 1778824 3762647 Suden_1698 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394209.1 1778597 R 326298 CDS YP_394210.1 78777895 3762648 complement(1778824..1780029) 1 NC_007575.1 O-antigen polymerase 1780029 3762648 Suden_1699 Sulfurimonas denitrificans DSM 1251 O-antigen polymerase YP_394210.1 1778824 R 326298 CDS YP_394211.1 78777896 3762649 complement(1780032..1781348) 1 NC_007575.1 undecaprenyl-phosphate galactosephosphotransferase 1781348 3762649 Suden_1700 Sulfurimonas denitrificans DSM 1251 undecaprenyl-phosphate galactosephosphotransferase YP_394211.1 1780032 R 326298 CDS YP_394212.1 78777897 3762650 complement(1781345..1782436) 1 NC_007575.1 group 1 glycosyl transferase 1782436 3762650 Suden_1701 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_394212.1 1781345 R 326298 CDS YP_394213.1 78777898 3762651 complement(1782433..1783515) 1 NC_007575.1 group 1 glycosyl transferase 1783515 3762651 Suden_1702 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_394213.1 1782433 R 326298 CDS YP_394214.1 78777899 3762652 complement(1783541..1784419) 1 NC_007575.1 NAD-dependent epimerase/dehydratase 1784419 3762652 Suden_1703 Sulfurimonas denitrificans DSM 1251 NAD-dependent epimerase/dehydratase YP_394214.1 1783541 R 326298 CDS YP_394215.1 78777900 3762653 complement(1784423..1785457) 1 NC_007575.1 GDP-mannose 4,6-dehydratase 1785457 3762653 Suden_1704 Sulfurimonas denitrificans DSM 1251 GDP-mannose 4,6-dehydratase YP_394215.1 1784423 R 326298 CDS YP_394216.1 78777901 3762654 complement(1785468..1786778) 1 NC_007575.1 Outer membrane efflux protein 1786778 3762654 Suden_1705 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_394216.1 1785468 R 326298 CDS YP_394217.1 78777902 3762655 complement(1786768..1788063) 1 NC_007575.1 Type I secretion membrane fusion protein, HlyD 1788063 3762655 Suden_1706 Sulfurimonas denitrificans DSM 1251 Type I secretion membrane fusion protein, HlyD YP_394217.1 1786768 R 326298 CDS YP_394218.1 78777903 3762656 complement(1788071..1789861) 1 NC_007575.1 Type I secretion system ATPase, PrtD 1789861 3762656 Suden_1707 Sulfurimonas denitrificans DSM 1251 Type I secretion system ATPase, PrtD YP_394218.1 1788071 R 326298 CDS YP_394219.1 78777904 3762657 complement(1789870..1791255) 1 NC_007575.1 hypothetical protein 1791255 3762657 Suden_1708 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394219.1 1789870 R 326298 CDS YP_394220.1 78777905 3762658 complement(1791372..1791842) 1 NC_007575.1 hypothetical protein 1791842 3762658 Suden_1709 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394220.1 1791372 R 326298 CDS YP_394221.1 78777906 3762737 complement(1791989..1793188) 1 NC_007575.1 Na-Ca exchanger/integrin-beta4 1793188 3762737 Suden_1710 Sulfurimonas denitrificans DSM 1251 Na-Ca exchanger/integrin-beta4 YP_394221.1 1791989 R 326298 CDS YP_394222.1 78777907 3762738 1793390..1793587 1 NC_007575.1 hypothetical protein 1793587 3762738 Suden_1711 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394222.1 1793390 D 326298 CDS YP_394223.1 78777908 3762740 complement(1794231..1795070) 1 NC_007575.1 transposase IS4 1795070 3762740 Suden_1713 Sulfurimonas denitrificans DSM 1251 transposase IS4 YP_394223.1 1794231 R 326298 CDS YP_394224.1 78777909 3762741 1795188..1795511 1 NC_007575.1 hypothetical protein 1795511 3762741 Suden_1714 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394224.1 1795188 D 326298 CDS YP_394225.1 78777910 3762742 complement(1795527..1796009) 1 NC_007575.1 hypothetical protein 1796009 3762742 Suden_1715 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394225.1 1795527 R 326298 CDS YP_394226.1 78777911 3762743 complement(1796234..1799023) 1 NC_007575.1 hemolysin-type calcium-binding region 1799023 3762743 Suden_1716 Sulfurimonas denitrificans DSM 1251 hemolysin-type calcium-binding region YP_394226.1 1796234 R 326298 CDS YP_394227.1 78777912 3762744 1799640..1799948 1 NC_007575.1 hypothetical protein 1799948 3762744 Suden_1717 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394227.1 1799640 D 326298 CDS YP_394228.1 78777913 3762745 1799935..1800162 1 NC_007575.1 CopG family transcriptional regulator 1800162 3762745 Suden_1718 Sulfurimonas denitrificans DSM 1251 CopG family transcriptional regulator YP_394228.1 1799935 D 326298 CDS YP_394229.1 78777914 3762746 1800407..1800619 1 NC_007575.1 hypothetical protein 1800619 3762746 Suden_1719 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394229.1 1800407 D 326298 CDS YP_394230.1 78777915 3762747 1800609..1801016 1 NC_007575.1 twitching motility protein PilT 1801016 3762747 Suden_1720 Sulfurimonas denitrificans DSM 1251 twitching motility protein PilT YP_394230.1 1800609 D 326298 CDS YP_394231.1 78777916 3762748 1801644..1802003 1 NC_007575.1 hypothetical protein 1802003 3762748 Suden_1721 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394231.1 1801644 D 326298 CDS YP_394232.1 78777917 3762749 complement(1802050..1802604) 1 NC_007575.1 DNA invertase RlgA 1802604 3762749 Suden_1722 Sulfurimonas denitrificans DSM 1251 DNA invertase RlgA YP_394232.1 1802050 R 326298 CDS YP_394233.1 78777918 3762750 complement(1802601..1803203) 1 NC_007575.1 Phage integrase 1803203 3762750 Suden_1723 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_394233.1 1802601 R 326298 CDS YP_394234.1 78777919 3762751 complement(1803691..1804437) 1 NC_007575.1 hypothetical protein 1804437 3762751 Suden_1724 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394234.1 1803691 R 326298 CDS YP_394235.1 78777920 3762752 complement(1805475..1806221) 1 NC_007575.1 hypothetical protein 1806221 3762752 Suden_1725 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394235.1 1805475 R 326298 CDS YP_394236.1 78777921 3762753 complement(1806726..1810160) 1 NC_007575.1 hemolysin-type calcium-binding region 1810160 3762753 Suden_1726 Sulfurimonas denitrificans DSM 1251 hemolysin-type calcium-binding region YP_394236.1 1806726 R 326298 CDS YP_394237.1 78777922 3762927 complement(1810670..1812160) 1 NC_007575.1 hypothetical protein 1812160 3762927 Suden_1728 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394237.1 1810670 R 326298 CDS YP_394238.1 78777923 3762928 complement(1812176..1814692) 1 NC_007575.1 group 1 glycosyl transferase 1814692 3762928 Suden_1729 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_394238.1 1812176 R 326298 CDS YP_394239.1 78777924 3762929 complement(1814695..1815723) 1 NC_007575.1 methyltransferase FkbM 1815723 3762929 Suden_1730 Sulfurimonas denitrificans DSM 1251 methyltransferase FkbM YP_394239.1 1814695 R 326298 CDS YP_394240.1 78777925 3762930 complement(1815720..1816952) 1 NC_007575.1 ABC transporter-like protein 1816952 3762930 Suden_1731 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394240.1 1815720 R 326298 CDS YP_394241.1 78777926 3762931 complement(1816949..1817740) 1 NC_007575.1 hypothetical protein 1817740 3762931 Suden_1732 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394241.1 1816949 R 326298 CDS YP_394242.1 78777927 3762932 complement(1817822..1818976) 1 NC_007575.1 group 1 glycosyl transferase 1818976 3762932 Suden_1733 Sulfurimonas denitrificans DSM 1251 group 1 glycosyl transferase YP_394242.1 1817822 R 326298 CDS YP_394243.1 78777928 3762933 complement(1818986..1820353) 1 NC_007575.1 mannose-1-phosphate guanylyltransferase 1820353 3762933 Suden_1734 Sulfurimonas denitrificans DSM 1251 mannose-1-phosphate guanylyltransferase YP_394243.1 1818986 R 326298 CDS YP_394244.1 78777929 3762934 1820543..1821463 1 NC_007575.1 sugar transferase 1821463 3762934 Suden_1735 Sulfurimonas denitrificans DSM 1251 sugar transferase YP_394244.1 1820543 D 326298 CDS YP_394245.1 78777930 3762935 complement(1821458..1822612) 1 NC_007575.1 hypothetical protein 1822612 3762935 Suden_1736 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394245.1 1821458 R 326298 CDS YP_394246.1 78777931 3762936 1822673..1823992 1 NC_007575.1 hypothetical protein 1823992 3762936 Suden_1737 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394246.1 1822673 D 326298 CDS YP_394247.1 78777932 3762937 1823979..1824968 1 NC_007575.1 tRNA(Ile)-lysidine synthetase-like protein 1824968 3762937 Suden_1738 Sulfurimonas denitrificans DSM 1251 tRNA(Ile)-lysidine synthetase-like protein YP_394247.1 1823979 D 326298 CDS YP_394248.1 78777933 3762938 complement(1824960..1826147) 1 NC_007575.1 MscS mechanosensitive ion channel 1826147 3762938 Suden_1739 Sulfurimonas denitrificans DSM 1251 MscS mechanosensitive ion channel YP_394248.1 1824960 R 326298 CDS YP_394249.1 78777934 3762939 complement(1826172..1826711) 1 NC_007575.1 hypothetical protein 1826711 3762939 Suden_1740 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394249.1 1826172 R 326298 CDS YP_394250.1 78777935 3762940 complement(1826701..1827255) 1 NC_007575.1 hypothetical protein 1827255 3762940 Suden_1741 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394250.1 1826701 R 326298 CDS YP_394251.1 78777936 3762941 complement(1827256..1828248) 1 NC_007575.1 hypothetical protein 1828248 3762941 Suden_1742 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394251.1 1827256 R 326298 CDS YP_394252.1 78777937 3762942 complement(1828245..1829057) 1 NC_007575.1 Phage integrase 1829057 3762942 Suden_1743 Sulfurimonas denitrificans DSM 1251 Phage integrase YP_394252.1 1828245 R 326298 CDS YP_394253.1 78777938 3762943 complement(1829062..1829520) 1 NC_007575.1 hypothetical protein 1829520 3762943 Suden_1744 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394253.1 1829062 R 326298 CDS YP_394254.1 78777939 3762944 complement(1829510..1830133) 1 NC_007575.1 hypothetical protein 1830133 3762944 Suden_1745 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394254.1 1829510 R 326298 CDS YP_394255.1 78777940 3762945 complement(1830126..1831433) 1 NC_007575.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1831433 3762945 Suden_1746 Sulfurimonas denitrificans DSM 1251 (dimethylallyl)adenosine tRNA methylthiotransferase YP_394255.1 1830126 R 326298 CDS YP_394256.1 78777941 3762907 complement(1831439..1831684) 1 NC_007575.1 hypothetical protein 1831684 3762907 Suden_1747 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394256.1 1831439 R 326298 CDS YP_394257.1 78777942 3762908 1831858..1833000 1 NC_007575.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1833000 nusA 3762908 nusA Sulfurimonas denitrificans DSM 1251 transcription elongation factor NusA YP_394257.1 1831858 D 326298 CDS YP_394258.1 78777943 3762909 complement(1833152..1834111) 1 NC_007575.1 binding-protein dependent transport system inner membrane protein 1834111 3762909 Suden_1749 Sulfurimonas denitrificans DSM 1251 binding-protein dependent transport system inner membrane protein YP_394258.1 1833152 R 326298 CDS YP_394259.1 78777944 3762910 complement(1834202..1834861) 1 NC_007575.1 hypothetical protein 1834861 3762910 Suden_1750 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394259.1 1834202 R 326298 CDS YP_394260.1 78777945 3762911 complement(1834951..1835772) 1 NC_007575.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1835772 3762911 Suden_1751 Sulfurimonas denitrificans DSM 1251 enoyl-ACP reductase YP_394260.1 1834951 R 326298 CDS YP_394261.1 78777946 3762912 complement(1835784..1836506) 1 NC_007575.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1836506 tpiA 3762912 tpiA Sulfurimonas denitrificans DSM 1251 triosephosphate isomerase YP_394261.1 1835784 R 326298 CDS YP_394262.1 78777947 3762913 complement(1836510..1837709) 1 NC_007575.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1837709 pgk 3762913 pgk Sulfurimonas denitrificans DSM 1251 phosphoglycerate kinase YP_394262.1 1836510 R 326298 CDS YP_394263.1 78777948 3762914 complement(1837718..1838716) 1 NC_007575.1 glyceraldehyde-3-phosphate dehydrogenase 1838716 3762914 Suden_1754 Sulfurimonas denitrificans DSM 1251 glyceraldehyde-3-phosphate dehydrogenase YP_394263.1 1837718 R 326298 CDS YP_394264.1 78777949 3762915 1838783..1839331 1 NC_007575.1 nicotinate-nucleotide adenylyltransferase 1839331 3762915 Suden_1755 Sulfurimonas denitrificans DSM 1251 nicotinate-nucleotide adenylyltransferase YP_394264.1 1838783 D 326298 CDS YP_394265.1 78777950 3762916 1839316..1839651 1 NC_007575.1 Iojap-related protein 1839651 3762916 Suden_1756 Sulfurimonas denitrificans DSM 1251 Iojap-related protein YP_394265.1 1839316 D 326298 CDS YP_394266.1 78777951 3762917 complement(1839723..1841138) 1 NC_007575.1 lytic transglycosylase, catalytic 1841138 3762917 Suden_1757 Sulfurimonas denitrificans DSM 1251 lytic transglycosylase, catalytic YP_394266.1 1839723 R 326298 CDS YP_394267.1 78777952 3762918 complement(1841162..1842436) 1 NC_007575.1 histidine kinase 1842436 3762918 Suden_1758 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_394267.1 1841162 R 326298 CDS YP_394268.1 78777953 3762919 complement(1842463..1843125) 1 NC_007575.1 two component transcriptional regulator 1843125 3762919 Suden_1759 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_394268.1 1842463 R 326298 CDS YP_394269.1 78777954 3762920 complement(1843181..1843696) 1 NC_007575.1 ferritin 1843696 3762920 Suden_1760 Sulfurimonas denitrificans DSM 1251 ferritin YP_394269.1 1843181 R 326298 CDS YP_394270.1 78777955 3762921 complement(1843761..1845896) 1 NC_007575.1 ferrous iron transport protein B 1845896 3762921 Suden_1761 Sulfurimonas denitrificans DSM 1251 ferrous iron transport protein B YP_394270.1 1843761 R 326298 CDS YP_394271.1 78777956 3762922 complement(1845893..1846123) 1 NC_007575.1 hypothetical protein 1846123 3762922 Suden_1762 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394271.1 1845893 R 326298 CDS YP_394272.1 78777957 3762923 complement(1846215..1847318) 1 NC_007575.1 hypothetical protein 1847318 3762923 Suden_1763 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394272.1 1846215 R 326298 CDS YP_394273.1 78777958 3762924 1847684..1848241 1 NC_007575.1 CDP-alcohol phosphatidyltransferase 1848241 3762924 Suden_1764 Sulfurimonas denitrificans DSM 1251 CDP-alcohol phosphatidyltransferase YP_394273.1 1847684 D 326298 CDS YP_394274.1 78777959 3762925 complement(1848244..1848627) 1 NC_007575.1 DoxX protein 1848627 3762925 Suden_1765 Sulfurimonas denitrificans DSM 1251 DoxX protein YP_394274.1 1848244 R 326298 CDS YP_394275.1 78777960 3762600 complement(1848624..1848821) 1 NC_007575.1 hypothetical protein 1848821 3762600 Suden_1766 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394275.1 1848624 R 326298 CDS YP_394276.1 78777961 3762601 1849066..1850688 1 NC_007575.1 DEAD/DEAH box helicase 1850688 3762601 Suden_1767 Sulfurimonas denitrificans DSM 1251 DEAD/DEAH box helicase YP_394276.1 1849066 D 326298 CDS YP_394277.1 78777962 3762602 1850864..1851232 1 NC_007575.1 HIT family protein 1851232 3762602 Suden_1768 Sulfurimonas denitrificans DSM 1251 HIT family protein YP_394277.1 1850864 D 326298 CDS YP_394278.1 78777963 3762603 1851369..1852667 1 NC_007575.1 c553-type monoheme cytochrome c 1852667 3762603 Suden_1769 Sulfurimonas denitrificans DSM 1251 c553-type monoheme cytochrome c YP_394278.1 1851369 D 326298 CDS YP_394279.1 78777964 3762604 1852688..1855282 1 NC_007575.1 nitrous-oxide reductase NosZ 1855282 3762604 Suden_1770 Sulfurimonas denitrificans DSM 1251 nitrous-oxide reductase NosZ YP_394279.1 1852688 D 326298 CDS YP_394280.1 78777965 3762605 complement(1855378..1856376) 1 NC_007575.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1856376 3762605 Suden_1771 Sulfurimonas denitrificans DSM 1251 3-oxoacyl-ACP synthase YP_394280.1 1855378 R 326298 CDS YP_394281.1 78777966 3762606 complement(1856376..1857374) 1 NC_007575.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1857374 3762606 Suden_1772 Sulfurimonas denitrificans DSM 1251 glycerol-3-phosphate acyltransferase PlsX YP_394281.1 1856376 R 326298 CDS YP_394282.1 78777967 3762607 complement(1857378..1857527) 1 NC_007575.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1857527 rpmF 3762607 rpmF Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L32 YP_394282.1 1857378 R 326298 CDS YP_394283.1 78777968 3762608 complement(1857550..1857930) 1 NC_007575.1 hypothetical protein 1857930 3762608 Suden_1774 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394283.1 1857550 R 326298 CDS YP_394284.1 78777969 3762609 complement(1857940..1858353) 1 NC_007575.1 nucleoside-diphosphate kinase 1858353 3762609 Suden_1775 Sulfurimonas denitrificans DSM 1251 nucleoside-diphosphate kinase YP_394284.1 1857940 R 326298 CDS YP_394285.1 78777970 3762610 complement(1858495..1858779) 1 NC_007575.1 4Fe-4S ferredoxin 1858779 3762610 Suden_1776 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_394285.1 1858495 R 326298 CDS YP_394286.1 78777971 3762611 complement(1858913..1860091) 1 NC_007575.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1860091 3762611 Suden_1777 Sulfurimonas denitrificans DSM 1251 S-adenosylmethionine synthetase YP_394286.1 1858913 R 326298 CDS YP_394287.1 78777972 3762612 1860277..1860873 1 NC_007575.1 alkyl hydroperoxide reductase 1860873 3762612 Suden_1778 Sulfurimonas denitrificans DSM 1251 alkyl hydroperoxide reductase YP_394287.1 1860277 D 326298 CDS YP_394288.1 78777973 3762613 complement(1861080..1862348) 1 NC_007575.1 ATPase 1862348 3762613 Suden_1779 Sulfurimonas denitrificans DSM 1251 ATPase YP_394288.1 1861080 R 326298 CDS YP_394289.1 78777974 3762614 1862399..1863643 1 NC_007575.1 diguanylate cyclase 1863643 3762614 Suden_1780 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394289.1 1862399 D 326298 CDS YP_394290.1 78777975 3762615 complement(1863640..1864752) 1 NC_007575.1 hypothetical protein 1864752 3762615 Suden_1781 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394290.1 1863640 R 326298 CDS YP_394291.1 78777976 3762616 complement(1864760..1865755) 1 NC_007575.1 ATPase 1865755 3762616 Suden_1782 Sulfurimonas denitrificans DSM 1251 ATPase YP_394291.1 1864760 R 326298 CDS YP_394292.1 78777977 3762617 complement(1865752..1867110) 1 NC_007575.1 hypothetical protein 1867110 3762617 Suden_1783 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394292.1 1865752 R 326298 CDS YP_394293.1 78777978 3762618 1867196..1868530 1 NC_007575.1 Na+/H+ antiporter NhaA 1868530 3762618 Suden_1784 Sulfurimonas denitrificans DSM 1251 Na+/H+ antiporter NhaA YP_394293.1 1867196 D 326298 CDS YP_394294.1 78777979 3762619 complement(1868527..1869552) 1 NC_007575.1 mandelate racemase 1869552 3762619 Suden_1785 Sulfurimonas denitrificans DSM 1251 mandelate racemase YP_394294.1 1868527 R 326298 CDS YP_394295.1 78777980 3762754 complement(1869549..1869986) 1 NC_007575.1 hypothetical protein 1869986 3762754 Suden_1786 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394295.1 1869549 R 326298 CDS YP_394296.1 78777981 3762755 1870177..1870758 1 NC_007575.1 hypothetical protein 1870758 3762755 Suden_1787 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394296.1 1870177 D 326298 CDS YP_394297.1 78777982 3762756 complement(1870755..1871885) 1 NC_007575.1 hypothetical protein 1871885 3762756 Suden_1788 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394297.1 1870755 R 326298 CDS YP_394298.1 78777983 3762757 complement(1871882..1872541) 1 NC_007575.1 negative regulator of AmpC, AmpD 1872541 3762757 Suden_1789 Sulfurimonas denitrificans DSM 1251 negative regulator of AmpC, AmpD YP_394298.1 1871882 R 326298 CDS YP_394299.1 78777984 3762758 1872591..1873334 1 NC_007575.1 exonuclease 1873334 3762758 Suden_1790 Sulfurimonas denitrificans DSM 1251 exonuclease YP_394299.1 1872591 D 326298 CDS YP_394300.1 78777985 3762759 complement(1873323..1874504) 1 NC_007575.1 Na+/H+ antiporter NhaC 1874504 3762759 Suden_1791 Sulfurimonas denitrificans DSM 1251 Na+/H+ antiporter NhaC YP_394300.1 1873323 R 326298 CDS YP_394301.1 78777986 3762760 complement(1874707..1875330) 1 NC_007575.1 hypothetical protein 1875330 3762760 Suden_1792 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394301.1 1874707 R 326298 CDS YP_394302.1 78777987 3762761 1875393..1876073 1 NC_007575.1 hypothetical protein 1876073 3762761 Suden_1793 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394302.1 1875393 D 326298 CDS YP_394303.1 78777988 3762762 complement(1876085..1877668) 1 NC_007575.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1877668 argS 3762762 argS Sulfurimonas denitrificans DSM 1251 arginyl-tRNA synthetase YP_394303.1 1876085 R 326298 CDS YP_394304.1 78777989 3762763 complement(1877684..1877929) 1 NC_007575.1 twin-arginine translocation protein TatA 1877929 3762763 Suden_1795 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation protein TatA YP_394304.1 1877684 R 326298 CDS YP_394305.1 78777990 3762764 complement(1877992..1878612) 1 NC_007575.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1878612 gmk 3762764 gmk Sulfurimonas denitrificans DSM 1251 guanylate kinase YP_394305.1 1877992 R 326298 CDS YP_394306.1 78777991 3762765 complement(1878612..1880021) 1 NC_007575.1 hypothetical protein 1880021 3762765 Suden_1797 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394306.1 1878612 R 326298 CDS YP_394307.1 78777992 3762766 complement(1880068..1880832) 1 NC_007575.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1880832 fliR 3762766 fliR Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis protein FliR YP_394307.1 1880068 R 326298 CDS YP_394308.1 78777993 3762767 complement(1880852..1881496) 1 NC_007575.1 ABC transporter-like protein 1881496 3762767 Suden_1799 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394308.1 1880852 R 326298 CDS YP_394309.1 78777994 3762768 complement(1881550..1882155) 1 NC_007575.1 lytic transglycosylase, catalytic 1882155 3762768 Suden_1800 Sulfurimonas denitrificans DSM 1251 lytic transglycosylase, catalytic YP_394309.1 1881550 R 326298 CDS YP_394310.1 78777995 3762769 complement(1882381..1883433) 1 NC_007575.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1883433 tsf 3762769 tsf Sulfurimonas denitrificans DSM 1251 elongation factor Ts YP_394310.1 1882381 R 326298 CDS YP_394311.1 78777996 3762770 complement(1883436..1884215) 1 NC_007575.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1884215 rpsB 3762770 rpsB Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S2 YP_394311.1 1883436 R 326298 CDS YP_394312.1 78777997 3762771 complement(1884530..1884997) 1 NC_007575.1 alkyl hydroperoxide reductase 1884997 3762771 Suden_1803 Sulfurimonas denitrificans DSM 1251 alkyl hydroperoxide reductase YP_394312.1 1884530 R 326298 CDS YP_394313.1 78777998 3762772 complement(1885007..1885591) 1 NC_007575.1 cytochrome B561 1885591 3762772 Suden_1804 Sulfurimonas denitrificans DSM 1251 cytochrome B561 YP_394313.1 1885007 R 326298 CDS YP_394314.1 78777999 3762792 complement(1885606..1886073) 1 NC_007575.1 hypothetical protein 1886073 3762792 Suden_1805 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394314.1 1885606 R 326298 CDS YP_394315.1 78778000 3762793 complement(1886066..1886677) 1 NC_007575.1 hypothetical protein 1886677 3762793 Suden_1806 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394315.1 1886066 R 326298 CDS YP_394316.1 78778001 3762794 complement(1886670..1887692) 1 NC_007575.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1887692 murG 3762794 murG Sulfurimonas denitrificans DSM 1251 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_394316.1 1886670 R 326298 CDS YP_394317.1 78778002 3762795 complement(1887699..1888862) 1 NC_007575.1 cell cycle protein 1888862 3762795 Suden_1808 Sulfurimonas denitrificans DSM 1251 cell cycle protein YP_394317.1 1887699 R 326298 CDS YP_394318.1 78778003 3762796 complement(1888870..1889388) 1 NC_007575.1 hypothetical protein 1889388 3762796 Suden_1809 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394318.1 1888870 R 326298 CDS YP_394319.1 78778004 3762797 complement(1889385..1889906) 1 NC_007575.1 hypothetical protein 1889906 3762797 Suden_1810 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394319.1 1889385 R 326298 CDS YP_394320.1 78778005 3762798 complement(1889903..1890763) 1 NC_007575.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1890763 ubiA 3762798 ubiA Sulfurimonas denitrificans DSM 1251 prenyltransferase YP_394320.1 1889903 R 326298 CDS YP_394321.1 78778006 3762799 1890772..1891725 1 NC_007575.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1891725 miaA 3762799 miaA Sulfurimonas denitrificans DSM 1251 tRNA delta(2)-isopentenylpyrophosphate transferase YP_394321.1 1890772 D 326298 CDS YP_394322.1 78778007 3762800 complement(1891722..1893455) 1 NC_007575.1 histone deacetylase superfamily protein 1893455 3762800 Suden_1813 Sulfurimonas denitrificans DSM 1251 histone deacetylase superfamily protein YP_394322.1 1891722 R 326298 CDS YP_394323.1 78778008 3762801 complement(1893539..1895905) 1 NC_007575.1 hypothetical protein 1895905 3762801 Suden_1814 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394323.1 1893539 R 326298 CDS YP_394324.1 78778009 3762802 complement(1895942..1897450) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1897450 3762802 Suden_1815 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit N YP_394324.1 1895942 R 326298 CDS YP_394325.1 78778010 3762803 complement(1897450..1899003) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1899003 3762803 Suden_1816 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit M YP_394325.1 1897450 R 326298 CDS YP_394326.1 78778011 3762804 complement(1899007..1900929) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1900929 3762804 Suden_1817 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit L YP_394326.1 1899007 R 326298 CDS YP_394327.1 78778012 3762805 complement(1900933..1901241) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1901241 3762805 Suden_1818 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit K YP_394327.1 1900933 R 326298 CDS YP_394328.1 78778013 3762806 complement(1901238..1901810) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1901810 3762806 Suden_1819 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit J YP_394328.1 1901238 R 326298 CDS YP_394329.1 78778014 3762807 complement(1901822..1902457) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1902457 3762807 Suden_1820 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit I YP_394329.1 1901822 R 326298 CDS YP_394330.1 78778015 3762808 complement(1902467..1903453) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1903453 3762808 Suden_1821 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit H YP_394330.1 1902467 R 326298 CDS YP_394331.1 78778016 3762809 complement(1903457..1905943) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1905943 3762809 Suden_1822 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit G YP_394331.1 1903457 R 326298 CDS YP_394332.1 78778017 3762810 complement(1905943..1908195) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1908195 3762810 Suden_1823 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit G YP_394332.1 1905943 R 326298 CDS YP_394333.1 78778018 3762811 complement(1908200..1910233) 1 NC_007575.1 glutamate synthase 1910233 3762811 Suden_1824 Sulfurimonas denitrificans DSM 1251 glutamate synthase YP_394333.1 1908200 R 326298 CDS YP_394334.1 78778019 3762773 complement(1910248..1910469) 1 NC_007575.1 NADH oxidoreductase I 1910469 3762773 Suden_1825 Sulfurimonas denitrificans DSM 1251 NADH oxidoreductase I YP_394334.1 1910248 R 326298 CDS YP_394335.1 78778020 3762774 complement(1910564..1911802) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1911802 3762774 Suden_1826 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit D YP_394335.1 1910564 R 326298 CDS YP_394336.1 78778021 3762775 complement(1911817..1912623) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C 1912623 3762775 Suden_1827 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit C YP_394336.1 1911817 R 326298 CDS YP_394337.1 78778022 3762776 complement(1912623..1913132) 1 NC_007575.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1913132 3762776 Suden_1828 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit B YP_394337.1 1912623 R 326298 CDS YP_394338.1 78778023 3762777 complement(1913114..1913503) 1 NC_007575.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 1913503 3762777 Suden_1829 Sulfurimonas denitrificans DSM 1251 NADH dehydrogenase subunit A YP_394338.1 1913114 R 326298 CDS YP_394339.1 78778024 3762778 1913795..1914442 1 NC_007575.1 hypothetical protein 1914442 3762778 Suden_1830 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394339.1 1913795 D 326298 CDS YP_394340.1 78778025 3762779 complement(1914456..1914905) 1 NC_007575.1 guanine deaminase 1914905 3762779 Suden_1831 Sulfurimonas denitrificans DSM 1251 guanine deaminase YP_394340.1 1914456 R 326298 CDS YP_394341.1 78778026 3762780 complement(1914913..1915263) 1 NC_007575.1 cobalamin (vitamin B12) biosynthesis CbiX protein 1915263 3762780 Suden_1832 Sulfurimonas denitrificans DSM 1251 cobalamin (vitamin B12) biosynthesis CbiX protein YP_394341.1 1914913 R 326298 CDS YP_394342.1 78778027 3762781 complement(1915274..1917010) 1 NC_007575.1 central region; ATPase AAA 1917010 3762781 Suden_1833 Sulfurimonas denitrificans DSM 1251 ATPase AAA YP_394342.1 1915274 R 326298 CDS YP_394343.1 78778028 3762782 complement(1917019..1918260) 1 NC_007575.1 involved in aromatic hydrocarbon degradation; hypothetical protein 1918260 3762782 Suden_1834 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394343.1 1917019 R 326298 CDS YP_394344.1 78778029 3762783 complement(1918311..1919156) 1 NC_007575.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1919156 3762783 Suden_1835 Sulfurimonas denitrificans DSM 1251 endonuclease IV YP_394344.1 1918311 R 326298 CDS YP_394345.1 78778030 3762784 complement(1919149..1919619) 1 NC_007575.1 lipoprotein 1919619 3762784 Suden_1836 Sulfurimonas denitrificans DSM 1251 lipoprotein YP_394345.1 1919149 R 326298 CDS YP_394346.1 78778031 3762785 1919753..1920199 1 NC_007575.1 hypothetical protein 1920199 3762785 Suden_1837 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394346.1 1919753 D 326298 CDS YP_394347.1 78778032 3762786 complement(1920380..1920817) 1 NC_007575.1 hemerythrin HHE cation binding protein 1920817 3762786 Suden_1838 Sulfurimonas denitrificans DSM 1251 hemerythrin HHE cation binding protein YP_394347.1 1920380 R 326298 CDS YP_394348.1 78778033 3762787 complement(1921538..1923511) 1 NC_007575.1 DNA (cytosine-5-)-methyltransferase 1923511 3762787 Suden_1839 Sulfurimonas denitrificans DSM 1251 DNA (cytosine-5-)-methyltransferase YP_394348.1 1921538 R 326298 CDS YP_394349.1 78778034 3762788 1923620..1924954 1 NC_007575.1 DNA-directed DNA polymerase 1924954 3762788 Suden_1840 Sulfurimonas denitrificans DSM 1251 DNA-directed DNA polymerase YP_394349.1 1923620 D 326298 CDS YP_394350.1 78778035 3762789 1924967..1925908 1 NC_007575.1 dexx-box ATPase 1925908 3762789 Suden_1841 Sulfurimonas denitrificans DSM 1251 dexx-box ATPase YP_394350.1 1924967 D 326298 CDS YP_394351.1 78778036 3762790 complement(1925946..1926746) 1 NC_007575.1 molecular chaperone DnaJ 1926746 3762790 Suden_1842 Sulfurimonas denitrificans DSM 1251 molecular chaperone DnaJ YP_394351.1 1925946 R 326298 CDS YP_394352.1 78778037 3762791 complement(1926818..1927291) 1 NC_007575.1 hypothetical protein 1927291 3762791 Suden_1843 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394352.1 1926818 R 326298 CDS YP_394353.1 78778038 3762677 complement(1927296..1928156) 1 NC_007575.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1928156 3762677 Suden_1844 Sulfurimonas denitrificans DSM 1251 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_394353.1 1927296 R 326298 CDS YP_394354.1 78778039 3762678 complement(1928169..1929245) 1 NC_007575.1 hypothetical protein 1929245 3762678 Suden_1845 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394354.1 1928169 R 326298 CDS YP_394355.1 78778040 3762679 complement(1929384..1930409) 1 NC_007575.1 hypothetical protein 1930409 3762679 Suden_1846 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394355.1 1929384 R 326298 CDS YP_394356.1 78778041 3762680 complement(1930460..1930777) 1 NC_007575.1 hypothetical protein 1930777 3762680 Suden_1847 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394356.1 1930460 R 326298 CDS YP_394357.1 78778042 3762681 complement(1930767..1931555) 1 NC_007575.1 hypothetical protein 1931555 3762681 Suden_1848 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394357.1 1930767 R 326298 CDS YP_394358.1 78778043 3762682 complement(1931552..1932541) 1 NC_007575.1 radical SAM family protein 1932541 3762682 Suden_1849 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_394358.1 1931552 R 326298 CDS YP_394359.1 78778044 3762683 complement(1932522..1933094) 1 NC_007575.1 hypothetical protein 1933094 3762683 Suden_1850 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394359.1 1932522 R 326298 CDS YP_394360.1 78778045 3762684 complement(1933105..1933974) 1 NC_007575.1 hypothetical protein 1933974 3762684 Suden_1851 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394360.1 1933105 R 326298 CDS YP_394361.1 78778046 3762685 complement(1934031..1936268) 1 NC_007575.1 ATPase 1936268 3762685 Suden_1852 Sulfurimonas denitrificans DSM 1251 ATPase YP_394361.1 1934031 R 326298 CDS YP_394362.1 78778047 3762686 complement(1936261..1937544) 1 NC_007575.1 ATPase 1937544 3762686 Suden_1853 Sulfurimonas denitrificans DSM 1251 ATPase YP_394362.1 1936261 R 326298 CDS YP_394363.1 78778048 3762687 complement(1937613..1939016) 1 NC_007575.1 DNA mismatch repair protein MutH 1939016 3762687 Suden_1854 Sulfurimonas denitrificans DSM 1251 DNA mismatch repair protein MutH YP_394363.1 1937613 R 326298 CDS YP_394364.1 78778049 3762688 complement(1939017..1940324) 1 NC_007575.1 DNA (cytosine-5-)-methyltransferase 1940324 3762688 Suden_1855 Sulfurimonas denitrificans DSM 1251 DNA (cytosine-5-)-methyltransferase YP_394364.1 1939017 R 326298 CDS YP_394365.1 78778050 3762689 1940540..1941247 1 NC_007575.1 short-chain dehydrogenase 1941247 3762689 Suden_1856 Sulfurimonas denitrificans DSM 1251 short-chain dehydrogenase YP_394365.1 1940540 D 326298 CDS YP_394366.1 78778051 3762690 complement(1941254..1942135) 1 NC_007575.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1942135 glyQ 3762690 glyQ Sulfurimonas denitrificans DSM 1251 glycyl-tRNA synthetase subunit alpha YP_394366.1 1941254 R 326298 CDS YP_394367.1 78778052 3762691 complement(1942180..1942860) 1 NC_007575.1 MerR family transcriptional regulator 1942860 3762691 Suden_1858 Sulfurimonas denitrificans DSM 1251 MerR family transcriptional regulator YP_394367.1 1942180 R 326298 CDS YP_394368.1 78778053 3762692 1942960..1943490 1 NC_007575.1 alkylhydroperoxidase 1943490 3762692 Suden_1859 Sulfurimonas denitrificans DSM 1251 alkylhydroperoxidase YP_394368.1 1942960 D 326298 CDS YP_394369.1 78778054 3762693 1943493..1943936 1 NC_007575.1 hypothetical protein 1943936 3762693 Suden_1860 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394369.1 1943493 D 326298 CDS YP_394370.1 78778055 3762694 complement(1943941..1944798) 1 NC_007575.1 hypothetical protein 1944798 3762694 Suden_1861 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394370.1 1943941 R 326298 CDS YP_394371.1 78778056 3762695 complement(1944814..1945287) 1 NC_007575.1 hypothetical protein 1945287 3762695 Suden_1862 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394371.1 1944814 R 326298 CDS YP_394372.1 78778057 3762696 complement(1945459..1945956) 1 NC_007575.1 phosphoribosylaminoimidazole carboxylase 1945956 3762696 Suden_1863 Sulfurimonas denitrificans DSM 1251 phosphoribosylaminoimidazole carboxylase YP_394372.1 1945459 R 326298 CDS YP_394373.1 78778058 3762697 complement(1946036..1947328) 1 NC_007575.1 peptidase U32 1947328 3762697 Suden_1864 Sulfurimonas denitrificans DSM 1251 peptidase U32 YP_394373.1 1946036 R 326298 CDS YP_394374.1 78778059 3762698 complement(1947325..1948059) 1 NC_007575.1 hypothetical protein 1948059 3762698 Suden_1865 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394374.1 1947325 R 326298 CDS YP_394375.1 78778060 3762699 1948146..1948925 1 NC_007575.1 histidinol phosphate phosphatase HisJ 1948925 3762699 Suden_1866 Sulfurimonas denitrificans DSM 1251 histidinol phosphate phosphatase HisJ YP_394375.1 1948146 D 326298 CDS YP_394376.1 78778061 3762700 1949003..1949323 1 NC_007575.1 thioredoxin 1949323 3762700 Suden_1867 Sulfurimonas denitrificans DSM 1251 thioredoxin YP_394376.1 1949003 D 326298 CDS YP_394377.1 78778062 3762701 1949401..1949820 1 NC_007575.1 hypothetical protein 1949820 3762701 Suden_1868 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394377.1 1949401 D 326298 CDS YP_394378.1 78778063 3762702 1949834..1950778 1 NC_007575.1 thioredoxin reductase 1950778 3762702 Suden_1869 Sulfurimonas denitrificans DSM 1251 thioredoxin reductase YP_394378.1 1949834 D 326298 CDS YP_394379.1 78778064 3762703 1950820..1951587 1 NC_007575.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1951587 3762703 Suden_1870 Sulfurimonas denitrificans DSM 1251 dihydrodipicolinate reductase YP_394379.1 1950820 D 326298 CDS YP_394380.1 78778065 3762704 1951658..1953013 1 NC_007575.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1953013 3762704 Suden_1871 Sulfurimonas denitrificans DSM 1251 amidophosphoribosyltransferase YP_394380.1 1951658 D 326298 CDS YP_394381.1 78778066 3762705 1953013..1953972 1 NC_007575.1 hypothetical protein 1953972 3762705 Suden_1872 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394381.1 1953013 D 326298 CDS YP_394382.1 78778067 3762706 complement(1953969..1954529) 1 NC_007575.1 hypothetical protein 1954529 3762706 Suden_1873 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394382.1 1953969 R 326298 CDS YP_394383.1 78778068 3762707 complement(1954526..1955035) 1 NC_007575.1 hypothetical protein 1955035 3762707 Suden_1874 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394383.1 1954526 R 326298 CDS YP_394384.1 78778069 3762708 complement(1955042..1955722) 1 NC_007575.1 phosphoribosyl-AMP cyclohydrolase 1955722 3762708 Suden_1875 Sulfurimonas denitrificans DSM 1251 phosphoribosyl-AMP cyclohydrolase YP_394384.1 1955042 R 326298 CDS YP_394385.1 78778070 3762709 complement(1955729..1956847) 1 NC_007575.1 Band 7 protein 1956847 3762709 Suden_1876 Sulfurimonas denitrificans DSM 1251 Band 7 protein YP_394385.1 1955729 R 326298 CDS YP_394386.1 78778071 3762710 complement(1956867..1957787) 1 NC_007575.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1957787 3762710 Suden_1877 Sulfurimonas denitrificans DSM 1251 branched-chain amino acid aminotransferase YP_394386.1 1956867 R 326298 CDS YP_394387.1 78778072 3762711 complement(1958037..1958390) 1 NC_007575.1 hypothetical protein 1958390 3762711 Suden_1878 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394387.1 1958037 R 326298 CDS YP_394388.1 78778073 3762712 complement(1958400..1959590) 1 NC_007575.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1959590 3762712 Suden_1879 Sulfurimonas denitrificans DSM 1251 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_394388.1 1958400 R 326298 CDS YP_394389.1 78778074 3762713 complement(1959697..1960368) 1 NC_007575.1 two component transcriptional regulator 1960368 3762713 Suden_1880 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_394389.1 1959697 R 326298 CDS YP_394390.1 78778075 3762714 complement(1960370..1961797) 1 NC_007575.1 PAS/PAC sensor signal transduction histidine kinase 1961797 3762714 Suden_1881 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor signal transduction histidine kinase YP_394390.1 1960370 R 326298 CDS YP_394391.1 78778076 3762715 complement(1961895..1963085) 1 NC_007575.1 hypothetical protein 1963085 3762715 Suden_1882 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394391.1 1961895 R 326298 CDS YP_394392.1 78778077 3762620 complement(1963269..1964273) 1 NC_007575.1 phosphate binding protein 1964273 3762620 Suden_1883 Sulfurimonas denitrificans DSM 1251 phosphate binding protein YP_394392.1 1963269 R 326298 CDS YP_394393.1 78778078 3762621 complement(1964338..1965192) 1 NC_007575.1 hypothetical protein 1965192 3762621 Suden_1884 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394393.1 1964338 R 326298 CDS YP_394394.1 78778079 3762622 1965300..1966157 1 NC_007575.1 phosphate ABC transporter permease 1966157 3762622 Suden_1885 Sulfurimonas denitrificans DSM 1251 phosphate ABC transporter permease YP_394394.1 1965300 D 326298 CDS YP_394395.1 78778080 3762623 1966157..1967002 1 NC_007575.1 phosphate ABC transporter permease 1967002 3762623 Suden_1886 Sulfurimonas denitrificans DSM 1251 phosphate ABC transporter permease YP_394395.1 1966157 D 326298 CDS YP_394396.1 78778081 3762624 1967002..1967787 1 NC_007575.1 phosphate ABC transporter permease 1967787 3762624 Suden_1887 Sulfurimonas denitrificans DSM 1251 phosphate ABC transporter permease YP_394396.1 1967002 D 326298 CDS YP_394397.1 78778082 3762625 1967833..1968504 1 NC_007575.1 phosphate uptake regulator-like protein 1968504 3762625 Suden_1888 Sulfurimonas denitrificans DSM 1251 phosphate uptake regulator-like protein YP_394397.1 1967833 D 326298 CDS YP_394398.1 78778083 3762626 1968587..1970017 1 NC_007575.1 glutamine synthetase type I 1970017 3762626 Suden_1889 Sulfurimonas denitrificans DSM 1251 glutamine synthetase type I YP_394398.1 1968587 D 326298 CDS YP_394399.1 78778084 3762627 1970163..1971821 1 NC_007575.1 2-isopropylmalate synthase 1971821 3762627 Suden_1890 Sulfurimonas denitrificans DSM 1251 2-isopropylmalate synthase YP_394399.1 1970163 D 326298 CDS YP_394400.1 78778085 3762628 1971961..1972383 1 NC_007575.1 hypothetical protein 1972383 3762628 Suden_1891 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394400.1 1971961 D 326298 CDS YP_394401.1 78778086 3762629 complement(1972411..1974378) 1 NC_007575.1 penicillin-binding protein 1A 1974378 3762629 Suden_1892 Sulfurimonas denitrificans DSM 1251 penicillin-binding protein 1A YP_394401.1 1972411 R 326298 CDS YP_394402.1 78778087 3762630 complement(1974375..1975064) 1 NC_007575.1 ABC transporter-like protein 1975064 3762630 Suden_1893 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394402.1 1974375 R 326298 CDS YP_394403.1 78778088 3762631 complement(1975061..1976155) 1 NC_007575.1 class I and II aminotransferase 1976155 3762631 Suden_1894 Sulfurimonas denitrificans DSM 1251 class I and II aminotransferase YP_394403.1 1975061 R 326298 CDS YP_394404.1 78778089 3762632 complement(1976155..1977822) 1 NC_007575.1 diguanylate cyclase 1977822 3762632 Suden_1895 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394404.1 1976155 R 326298 CDS YP_394405.1 78778090 3762633 complement(1977957..1978505) 1 NC_007575.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1978505 3762633 Suden_1896 Sulfurimonas denitrificans DSM 1251 Maf-like protein YP_394405.1 1977957 R 326298 CDS YP_394406.1 78778091 3762634 complement(1978506..1978988) 1 NC_007575.1 hypothetical protein 1978988 3762634 Suden_1897 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394406.1 1978506 R 326298 CDS YP_394407.1 78778092 3762635 complement(1978988..1981543) 1 NC_007575.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1981543 alaS 3762635 alaS Sulfurimonas denitrificans DSM 1251 alanyl-tRNA synthetase YP_394407.1 1978988 R 326298 CDS YP_394408.1 78778093 3762636 complement(1981609..1983024) 1 NC_007575.1 aldehyde dehydrogenase 1983024 3762636 Suden_1899 Sulfurimonas denitrificans DSM 1251 aldehyde dehydrogenase YP_394408.1 1981609 R 326298 CDS YP_394409.1 78778094 3762637 1983286..1983678 1 NC_007575.1 hypothetical protein 1983678 3762637 Suden_1900 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394409.1 1983286 D 326298 CDS YP_394410.1 78778095 3762638 complement(1983675..1984004) 1 NC_007575.1 formate dehydrogenase H large subunit 1984004 3762638 Suden_1901 Sulfurimonas denitrificans DSM 1251 formate dehydrogenase H large subunit YP_394410.1 1983675 R 326298 CDS YP_394411.1 78778096 3762639 complement(1984004..1986079) 1 NC_007575.1 molybdopterin oxidoreductase 1986079 3762639 Suden_1902 Sulfurimonas denitrificans DSM 1251 molybdopterin oxidoreductase YP_394411.1 1984004 R 326298 CDS YP_394412.1 78778097 3762850 complement(1986104..1986832) 1 NC_007575.1 short-chain dehydrogenase 1986832 3762850 Suden_1903 Sulfurimonas denitrificans DSM 1251 short-chain dehydrogenase YP_394412.1 1986104 R 326298 CDS YP_394413.1 78778098 3762851 complement(1986839..1988101) 1 NC_007575.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1988101 3762851 Suden_1904 Sulfurimonas denitrificans DSM 1251 homoserine dehydrogenase YP_394413.1 1986839 R 326298 CDS YP_394414.1 78778099 3762852 complement(1988140..1989357) 1 NC_007575.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1989357 3762852 Suden_1905 Sulfurimonas denitrificans DSM 1251 aspartate aminotransferase YP_394414.1 1988140 R 326298 CDS YP_394415.1 78778100 3762853 complement(1989426..1990253) 1 NC_007575.1 hypothetical protein 1990253 3762853 Suden_1906 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394415.1 1989426 R 326298 CDS YP_394416.1 78778101 3762854 complement(1990247..1991179) 1 NC_007575.1 hypothetical protein 1991179 3762854 Suden_1907 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394416.1 1990247 R 326298 CDS YP_394417.1 78778102 3762855 complement(1991176..1991856) 1 NC_007575.1 RNA methyltransferase TrmH, group 3 1991856 3762855 Suden_1908 Sulfurimonas denitrificans DSM 1251 RNA methyltransferase TrmH, group 3 YP_394417.1 1991176 R 326298 CDS YP_394418.1 78778103 3762856 complement(1991895..1992710) 1 NC_007575.1 hypothetical protein 1992710 3762856 Suden_1909 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394418.1 1991895 R 326298 CDS YP_394419.1 78778104 3762857 complement(1992723..1992923) 1 NC_007575.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1992923 rpmE 3762857 rpmE Sulfurimonas denitrificans DSM 1251 50S ribosomal protein L31 YP_394419.1 1992723 R 326298 CDS YP_394420.1 78778105 3762858 complement(1993040..1993717) 1 NC_007575.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1993717 3762858 Suden_1911 Sulfurimonas denitrificans DSM 1251 16S ribosomal RNA methyltransferase RsmE YP_394420.1 1993040 R 326298 CDS YP_394421.1 78778106 3762859 1994018..1995379 1 NC_007575.1 molybdopterin binding domain-containing protein 1995379 3762859 Suden_1912 Sulfurimonas denitrificans DSM 1251 molybdopterin binding domain-containing protein YP_394421.1 1994018 D 326298 CDS YP_394422.1 78778107 3762860 complement(1995359..1995940) 1 NC_007575.1 6-pyruvoyl tetrahydrobiopterin synthase 1995940 3762860 Suden_1913 Sulfurimonas denitrificans DSM 1251 6-pyruvoyl tetrahydrobiopterin synthase YP_394422.1 1995359 R 326298 CDS YP_394423.1 78778108 3762861 complement(1995940..1996605) 1 NC_007575.1 hypothetical protein 1996605 3762861 Suden_1914 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394423.1 1995940 R 326298 CDS YP_394424.1 78778109 3762862 complement(1996698..1997663) 1 NC_007575.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1997663 moaA 3762862 moaA Sulfurimonas denitrificans DSM 1251 molybdenum cofactor biosynthesis protein A YP_394424.1 1996698 R 326298 CDS YP_394425.1 78778110 3762863 complement(1997855..1998496) 1 NC_007575.1 hypothetical protein 1998496 3762863 Suden_1916 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394425.1 1997855 R 326298 CDS YP_394426.1 78778111 3762864 complement(1998655..1999926) 1 NC_007575.1 hypothetical protein 1999926 3762864 Suden_1917 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394426.1 1998655 R 326298 CDS YP_394427.1 78778112 3762865 2000251..2000715 1 NC_007575.1 RDD protein 2000715 3762865 Suden_1918 Sulfurimonas denitrificans DSM 1251 RDD protein YP_394427.1 2000251 D 326298 CDS YP_394428.1 78778113 3762866 complement(2000957..2001904) 1 NC_007575.1 ubiquinol cytochrome c oxidoreductase, cytochrome C1 subunit 2001904 3762866 Suden_1919 Sulfurimonas denitrificans DSM 1251 ubiquinol cytochrome c oxidoreductase, cytochrome C1 subunit YP_394428.1 2000957 R 326298 CDS YP_394429.1 78778114 3762867 complement(2001915..2003129) 1 NC_007575.1 cytochrome b/b6-like protein 2003129 3762867 Suden_1920 Sulfurimonas denitrificans DSM 1251 cytochrome b/b6-like protein YP_394429.1 2001915 R 326298 CDS YP_394430.1 78778115 3762868 complement(2003142..2003639) 1 NC_007575.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 2003639 3762868 Suden_1921 Sulfurimonas denitrificans DSM 1251 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_394430.1 2003142 R 326298 CDS YP_394431.1 78778116 3763043 complement(2003726..2004592) 1 NC_007575.1 hypothetical protein 2004592 3763043 Suden_1922 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394431.1 2003726 R 326298 CDS YP_394432.1 78778117 3763044 complement(2004614..2006494) 1 NC_007575.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2006494 3763044 Suden_1923 Sulfurimonas denitrificans DSM 1251 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_394432.1 2004614 R 326298 CDS YP_394433.1 78778118 3763045 2006674..2007777 1 NC_007575.1 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 2007777 3763045 Suden_1924 Sulfurimonas denitrificans DSM 1251 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase YP_394433.1 2006674 D 326298 CDS YP_394434.1 78778119 3763046 2007774..2008139 1 NC_007575.1 response regulator receiver domain-containing protein 2008139 3763046 Suden_1925 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_394434.1 2007774 D 326298 CDS YP_394435.1 78778120 3763047 2008143..2010236 1 NC_007575.1 PAS/PAC sensor signal transduction histidine kinase 2010236 3763047 Suden_1926 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor signal transduction histidine kinase YP_394435.1 2008143 D 326298 CDS YP_394436.1 78778121 3763048 2010238..2012565 1 NC_007575.1 histidine kinase 2012565 3763048 Suden_1927 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_394436.1 2010238 D 326298 CDS YP_394437.1 78778122 3763049 2012565..2013347 1 NC_007575.1 signal transduction protein 2013347 3763049 Suden_1928 Sulfurimonas denitrificans DSM 1251 signal transduction protein YP_394437.1 2012565 D 326298 CDS YP_394438.1 78778123 3763050 2013408..2014094 1 NC_007575.1 Sel1 repeat-containing protein 2014094 3763050 Suden_1929 Sulfurimonas denitrificans DSM 1251 Sel1 repeat-containing protein YP_394438.1 2013408 D 326298 CDS YP_394439.1 78778124 3763051 2014129..2014740 1 NC_007575.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2014740 3763051 Suden_1930 Sulfurimonas denitrificans DSM 1251 riboflavin synthase subunit alpha YP_394439.1 2014129 D 326298 CDS YP_394440.1 78778125 3763052 2014740..2016515 1 NC_007575.1 ATP-dependent DNA helicase RecQ 2016515 3763052 Suden_1931 Sulfurimonas denitrificans DSM 1251 ATP-dependent DNA helicase RecQ YP_394440.1 2014740 D 326298 CDS YP_394441.1 78778126 3763053 2016631..2018679 1 NC_007575.1 methyl-accepting chemotaxis sensory transducer 2018679 3763053 Suden_1932 Sulfurimonas denitrificans DSM 1251 methyl-accepting chemotaxis sensory transducer YP_394441.1 2016631 D 326298 CDS YP_394442.1 78778127 3763054 complement(2018685..2019449) 1 NC_007575.1 hypothetical protein 2019449 3763054 Suden_1933 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394442.1 2018685 R 326298 CDS YP_394443.1 78778128 3763055 complement(2019511..2019804) 1 NC_007575.1 hypothetical protein 2019804 3763055 Suden_1934 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394443.1 2019511 R 326298 CDS YP_394444.1 78778129 3763056 complement(2019804..2020022) 1 NC_007575.1 hypothetical protein 2020022 3763056 Suden_1935 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394444.1 2019804 R 326298 CDS YP_394445.1 78778130 3763057 complement(2020163..2020651) 1 NC_007575.1 hypothetical protein 2020651 3763057 Suden_1936 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394445.1 2020163 R 326298 CDS YP_394446.1 78778131 3763058 complement(2020653..2020955) 1 NC_007575.1 hypothetical protein 2020955 3763058 Suden_1937 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394446.1 2020653 R 326298 CDS YP_394447.1 78778132 3763059 complement(2020959..2021462) 1 NC_007575.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 2021462 3763059 Suden_1938 Sulfurimonas denitrificans DSM 1251 S-ribosylhomocysteinase YP_394447.1 2020959 R 326298 CDS YP_394448.1 78778133 3763060 2021598..2022179 1 NC_007575.1 chemotaxis protein CheB 2022179 3763060 Suden_1939 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheB YP_394448.1 2021598 D 326298 CDS YP_394449.1 78778134 3763061 2022179..2022958 1 NC_007575.1 chemotaxis protein CheR 2022958 3763061 Suden_1940 Sulfurimonas denitrificans DSM 1251 chemotaxis protein CheR YP_394449.1 2022179 D 326298 CDS YP_394450.1 78778135 3763062 2023036..2025621 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 2025621 3763062 Suden_1941 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_394450.1 2023036 D 326298 CDS YP_394451.1 78778136 3762946 complement(2025627..2025830) 1 NC_007575.1 hypothetical protein 2025830 3762946 Suden_1942 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394451.1 2025627 R 326298 CDS YP_394452.1 78778137 3762947 complement(2025827..2027581) 1 NC_007575.1 Na+/Pi-cotransporter 2027581 3762947 Suden_1943 Sulfurimonas denitrificans DSM 1251 Na+/Pi-cotransporter YP_394452.1 2025827 R 326298 CDS YP_394453.1 78778138 3762948 complement(2027596..2028744) 1 NC_007575.1 Sodium/hydrogen exchanger 2028744 3762948 Suden_1944 Sulfurimonas denitrificans DSM 1251 Sodium/hydrogen exchanger YP_394453.1 2027596 R 326298 CDS YP_394454.1 78778139 3762949 complement(2028819..2030054) 1 NC_007575.1 DEAD/DEAH box helicase 2030054 3762949 Suden_1945 Sulfurimonas denitrificans DSM 1251 DEAD/DEAH box helicase YP_394454.1 2028819 R 326298 CDS YP_394455.1 78778140 3762950 complement(2030122..2030970) 1 NC_007575.1 AraC family transcriptional regulator 2030970 3762950 Suden_1946 Sulfurimonas denitrificans DSM 1251 AraC family transcriptional regulator YP_394455.1 2030122 R 326298 CDS YP_394456.1 78778141 3762951 complement(2030982..2032244) 1 NC_007575.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2032244 3762951 Suden_1947 Sulfurimonas denitrificans DSM 1251 serine hydroxymethyltransferase YP_394456.1 2030982 R 326298 CDS YP_394457.1 78778142 3762952 complement(2032335..2032808) 1 NC_007575.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2032808 3762952 Suden_1948 Sulfurimonas denitrificans DSM 1251 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_394457.1 2032335 R 326298 CDS YP_394458.1 78778143 3762953 2032937..2033461 1 NC_007575.1 hypothetical protein 2033461 3762953 Suden_1949 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394458.1 2032937 D 326298 CDS YP_394459.1 78778144 3762954 complement(2033479..2034369) 1 NC_007575.1 hypothetical protein 2034369 3762954 Suden_1950 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394459.1 2033479 R 326298 CDS YP_394460.1 78778145 3762955 2034646..2035053 1 NC_007575.1 response regulator receiver domain-containing protein 2035053 3762955 Suden_1951 Sulfurimonas denitrificans DSM 1251 response regulator receiver domain-containing protein YP_394460.1 2034646 D 326298 CDS YP_394461.1 78778146 3762956 2035506..2040122 1 NC_007575.1 hypothetical protein 2040122 3762956 Suden_1952 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394461.1 2035506 D 326298 CDS YP_394462.1 78778147 3762957 2040361..2040603 1 NC_007575.1 hypothetical protein 2040603 3762957 Suden_1953 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394462.1 2040361 D 326298 CDS YP_394463.1 78778148 3762958 2040967..2041194 1 NC_007575.1 hypothetical protein 2041194 3762958 Suden_1954 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394463.1 2040967 D 326298 CDS YP_394464.1 78778149 3762959 2041199..2041459 1 NC_007575.1 hypothetical protein 2041459 3762959 Suden_1955 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394464.1 2041199 D 326298 CDS YP_394465.1 78778150 3762960 complement(2041787..2041999) 1 NC_007575.1 plasmid stabilization system protein 2041999 3762960 Suden_1956 Sulfurimonas denitrificans DSM 1251 plasmid stabilization system protein YP_394465.1 2041787 R 326298 CDS YP_394466.1 78778151 3762961 complement(2042004..2042171) 1 NC_007575.1 hypothetical protein 2042171 3762961 Suden_1957 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394466.1 2042004 R 326298 CDS YP_394467.1 78778152 3762962 2042214..2042456 1 NC_007575.1 hypothetical protein 2042456 3762962 Suden_1958 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394467.1 2042214 D 326298 CDS YP_394468.1 78778153 3762963 complement(2042946..2043155) 1 NC_007575.1 hypothetical protein 2043155 3762963 Suden_1959 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394468.1 2042946 R 326298 CDS YP_394469.1 78778154 3762964 2043371..2043565 1 NC_007575.1 hypothetical protein 2043565 3762964 Suden_1960 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394469.1 2043371 D 326298 CDS YP_394470.1 78778155 3762965 complement(2043600..2044073) 1 NC_007575.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2044073 3762965 Suden_1961 Sulfurimonas denitrificans DSM 1251 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_394470.1 2043600 R 326298 CDS YP_394471.1 78778156 3762966 2044312..2045601 1 NC_007575.1 diguanylate cyclase 2045601 3762966 Suden_1962 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394471.1 2044312 D 326298 CDS YP_394472.1 78778157 3762967 complement(2045687..2046310) 1 NC_007575.1 DSBA oxidoreductase 2046310 3762967 Suden_1963 Sulfurimonas denitrificans DSM 1251 DSBA oxidoreductase YP_394472.1 2045687 R 326298 CDS YP_394473.1 78778158 3762968 2046524..2047000 1 NC_007575.1 hypothetical protein 2047000 3762968 Suden_1964 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394473.1 2046524 D 326298 CDS YP_394474.1 78778159 3762969 2047069..2047278 1 NC_007575.1 CopG family transcriptional regulator 2047278 3762969 Suden_1965 Sulfurimonas denitrificans DSM 1251 CopG family transcriptional regulator YP_394474.1 2047069 D 326298 CDS YP_394475.1 78778160 3762970 2047268..2047525 1 NC_007575.1 addiction module toxin RelE/StbE 2047525 3762970 Suden_1966 Sulfurimonas denitrificans DSM 1251 addiction module toxin RelE/StbE YP_394475.1 2047268 D 326298 CDS YP_394476.1 78778161 3762971 complement(2047708..2050506) 1 NC_007575.1 helicase-like protein 2050506 3762971 Suden_1967 Sulfurimonas denitrificans DSM 1251 helicase-like protein YP_394476.1 2047708 R 326298 CDS YP_394477.1 78778162 3762972 complement(2050536..2051705) 1 NC_007575.1 UDP-glucose 6-dehydrogenase 2051705 3762972 Suden_1968 Sulfurimonas denitrificans DSM 1251 UDP-glucose 6-dehydrogenase YP_394477.1 2050536 R 326298 CDS YP_394478.1 78778163 3762973 2051833..2052276 1 NC_007575.1 hypothetical protein 2052276 3762973 Suden_1969 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394478.1 2051833 D 326298 CDS YP_394479.1 78778164 3762974 complement(2052283..2054244) 1 NC_007575.1 short chain dehydrogenase 2054244 3762974 Suden_1970 Sulfurimonas denitrificans DSM 1251 short chain dehydrogenase YP_394479.1 2052283 R 326298 CDS YP_394480.1 78778165 3762975 complement(2054249..2055328) 1 NC_007575.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 2055328 mtnA 3762975 mtnA Sulfurimonas denitrificans DSM 1251 methylthioribose-1-phosphate isomerase YP_394480.1 2054249 R 326298 CDS YP_394481.1 78778166 3762976 complement(2055318..2056538) 1 NC_007575.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 2056538 mtnK 3762976 mtnK Sulfurimonas denitrificans DSM 1251 methylthioribose kinase YP_394481.1 2055318 R 326298 CDS YP_394482.1 78778167 3762977 complement(2056835..2057530) 1 NC_007575.1 hypothetical protein 2057530 3762977 Suden_1973 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394482.1 2056835 R 326298 CDS YP_394483.1 78778168 3762978 complement(2057517..2057819) 1 NC_007575.1 hypothetical protein 2057819 3762978 Suden_1974 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394483.1 2057517 R 326298 CDS YP_394484.1 78778169 3762979 complement(2057974..2058381) 1 NC_007575.1 hypothetical protein 2058381 3762979 Suden_1975 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394484.1 2057974 R 326298 CDS YP_394485.1 78778170 3762980 complement(2058400..2059398) 1 NC_007575.1 AsnC family transcriptional regulator 2059398 3762980 Suden_1976 Sulfurimonas denitrificans DSM 1251 AsnC family transcriptional regulator YP_394485.1 2058400 R 326298 CDS YP_394486.1 78778171 3762981 2059540..2060106 1 NC_007575.1 siroheme synthase CysG 2060106 3762981 Suden_1977 Sulfurimonas denitrificans DSM 1251 siroheme synthase CysG YP_394486.1 2059540 D 326298 CDS YP_394487.1 78778172 3762982 2060107..2060487 1 NC_007575.1 hypothetical protein 2060487 3762982 Suden_1978 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394487.1 2060107 D 326298 CDS YP_394488.1 78778173 3762983 complement(2060484..2061704) 1 NC_007575.1 major facilitator transporter 2061704 3762983 Suden_1979 Sulfurimonas denitrificans DSM 1251 major facilitator transporter YP_394488.1 2060484 R 326298 CDS YP_394489.1 78778174 3762984 complement(2061697..2062593) 1 NC_007575.1 glycosyl transferase 2062593 3762984 Suden_1980 Sulfurimonas denitrificans DSM 1251 glycosyl transferase YP_394489.1 2061697 R 326298 CDS YP_394490.1 78778175 3762831 complement(2062765..2063169) 1 NC_007575.1 hypothetical protein 2063169 3762831 Suden_1981 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394490.1 2062765 R 326298 CDS YP_394491.1 78778176 3762832 2063691..2064017 1 NC_007575.1 hypothetical protein 2064017 3762832 Suden_1982 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394491.1 2063691 D 326298 CDS YP_394492.1 78778177 3762833 2064057..2064743 1 NC_007575.1 nitric-oxide reductase subunit NorC 2064743 3762833 Suden_1983 Sulfurimonas denitrificans DSM 1251 nitric-oxide reductase subunit NorC YP_394492.1 2064057 D 326298 CDS YP_394493.1 78778178 3762834 2064733..2066157 1 NC_007575.1 nitric-oxide reductase subunit NorB 2066157 3762834 Suden_1984 Sulfurimonas denitrificans DSM 1251 nitric-oxide reductase subunit NorB YP_394493.1 2064733 D 326298 CDS YP_394494.1 78778179 3762835 2066434..2068074 1 NC_007575.1 nitrite reductase NirS 2068074 3762835 Suden_1985 Sulfurimonas denitrificans DSM 1251 nitrite reductase NirS YP_394494.1 2066434 D 326298 CDS YP_394495.1 78778180 3762836 2068264..2068569 1 NC_007575.1 cytochrome c, class I 2068569 3762836 Suden_1986 Sulfurimonas denitrificans DSM 1251 cytochrome c, class I YP_394495.1 2068264 D 326298 CDS YP_394496.1 78778181 3762837 2068570..2069691 1 NC_007575.1 radical SAM family protein 2069691 3762837 Suden_1987 Sulfurimonas denitrificans DSM 1251 radical SAM family protein YP_394496.1 2068570 D 326298 CDS YP_394497.1 78778182 3762838 2069691..2070827 1 NC_007575.1 nitrite reductase NirF 2070827 3762838 Suden_1988 Sulfurimonas denitrificans DSM 1251 nitrite reductase NirF YP_394497.1 2069691 D 326298 CDS YP_394498.1 78778183 3762839 2070827..2071567 1 NC_007575.1 uroporphyrinogen-III C-methyltransferase 2071567 3762839 Suden_1989 Sulfurimonas denitrificans DSM 1251 uroporphyrinogen-III C-methyltransferase YP_394498.1 2070827 D 326298 CDS YP_394499.1 78778184 3762840 2071560..2073086 1 NC_007575.1 histidine kinase 2073086 3762840 Suden_1990 Sulfurimonas denitrificans DSM 1251 histidine kinase YP_394499.1 2071560 D 326298 CDS YP_394500.1 78778185 3762841 2073076..2073765 1 NC_007575.1 two component transcriptional regulator 2073765 3762841 Suden_1991 Sulfurimonas denitrificans DSM 1251 two component transcriptional regulator YP_394500.1 2073076 D 326298 CDS YP_394501.1 78778186 3762842 complement(2073762..2074463) 1 NC_007575.1 Sel1 repeat-containing protein 2074463 3762842 Suden_1992 Sulfurimonas denitrificans DSM 1251 Sel1 repeat-containing protein YP_394501.1 2073762 R 326298 CDS YP_394502.1 78778187 3762843 complement(2074536..2075753) 1 NC_007575.1 Sodium:dicarboxylate symporter 2075753 3762843 Suden_1993 Sulfurimonas denitrificans DSM 1251 Sodium:dicarboxylate symporter YP_394502.1 2074536 R 326298 CDS YP_394503.1 78778188 3762844 complement(2075767..2077095) 1 NC_007575.1 divalent cation transporter 2077095 3762844 Suden_1994 Sulfurimonas denitrificans DSM 1251 divalent cation transporter YP_394503.1 2075767 R 326298 CDS YP_394504.1 78778189 3762845 complement(2077234..2077719) 1 NC_007575.1 hypothetical protein 2077719 3762845 Suden_1995 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394504.1 2077234 R 326298 CDS YP_394505.1 78778190 3762846 2077802..2078395 1 NC_007575.1 lipoprotein 2078395 3762846 Suden_1996 Sulfurimonas denitrificans DSM 1251 lipoprotein YP_394505.1 2077802 D 326298 CDS YP_394506.1 78778191 3762847 2078454..2078900 1 NC_007575.1 hypothetical protein 2078900 3762847 Suden_1997 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394506.1 2078454 D 326298 CDS YP_394507.1 78778192 3762848 2078986..2080788 1 NC_007575.1 hypothetical protein 2080788 3762848 Suden_1998 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394507.1 2078986 D 326298 CDS YP_394508.1 78778193 3762849 complement(2080795..2081490) 1 NC_007575.1 hypothetical protein 2081490 3762849 Suden_1999 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394508.1 2080795 R 326298 CDS YP_394509.1 78778194 3762985 complement(2081534..2081812) 1 NC_007575.1 hypothetical protein 2081812 3762985 Suden_2000 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394509.1 2081534 R 326298 CDS YP_394510.1 78778195 3762986 complement(2081821..2083086) 1 NC_007575.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2083086 eno 3762986 eno Sulfurimonas denitrificans DSM 1251 phosphopyruvate hydratase YP_394510.1 2081821 R 326298 CDS YP_394511.1 78778196 3762987 complement(2083144..2084181) 1 NC_007575.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2084181 recA 3762987 recA Sulfurimonas denitrificans DSM 1251 recombinase A YP_394511.1 2083144 R 326298 CDS YP_394512.1 78778197 3762988 2084383..2086695 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 2086695 3762988 Suden_2003 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_394512.1 2084383 D 326298 CDS YP_394513.1 78778198 3762989 2086761..2087624 1 NC_007575.1 hypothetical protein 2087624 3762989 Suden_2004 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394513.1 2086761 D 326298 CDS YP_394514.1 78778199 3762990 2087624..2087890 1 NC_007575.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 2087890 fliQ 3762990 fliQ Sulfurimonas denitrificans DSM 1251 flagellar biosynthesis protein FliQ YP_394514.1 2087624 D 326298 CDS YP_394515.1 78778200 3762991 2087890..2088702 1 NC_007575.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2088702 murB 3762991 murB Sulfurimonas denitrificans DSM 1251 UDP-N-acetylenolpyruvoylglucosamine reductase YP_394515.1 2087890 D 326298 CDS YP_394516.1 78778201 3762992 complement(2088725..2089699) 1 NC_007575.1 nitrogen-fixing NifU-like protein 2089699 3762992 Suden_2007 Sulfurimonas denitrificans DSM 1251 nitrogen-fixing NifU-like protein YP_394516.1 2088725 R 326298 CDS YP_394517.1 78778202 3762993 complement(2089846..2091060) 1 NC_007575.1 class V aminotransferase 2091060 3762993 Suden_2008 Sulfurimonas denitrificans DSM 1251 class V aminotransferase YP_394517.1 2089846 R 326298 CDS YP_394518.1 78778203 3762994 2091222..2091725 1 NC_007575.1 hypothetical protein 2091725 3762994 Suden_2009 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394518.1 2091222 D 326298 CDS YP_394519.1 78778204 3762995 complement(2091722..2092408) 1 NC_007575.1 pseudouridine synthase 2092408 3762995 Suden_2010 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_394519.1 2091722 R 326298 CDS YP_394520.1 78778205 3762996 complement(2092511..2095576) 1 NC_007575.1 heavy metal efflux pump CzcA 2095576 3762996 Suden_2011 Sulfurimonas denitrificans DSM 1251 heavy metal efflux pump CzcA YP_394520.1 2092511 R 326298 CDS YP_394521.1 78778206 3762997 complement(2095569..2096627) 1 NC_007575.1 secretion protein HlyD 2096627 3762997 Suden_2012 Sulfurimonas denitrificans DSM 1251 secretion protein HlyD YP_394521.1 2095569 R 326298 CDS YP_394522.1 78778207 3762998 complement(2096624..2097805) 1 NC_007575.1 hypothetical protein 2097805 3762998 Suden_2013 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394522.1 2096624 R 326298 CDS YP_394523.1 78778208 3762999 complement(2097845..2098144) 1 NC_007575.1 hypothetical protein 2098144 3762999 Suden_2014 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394523.1 2097845 R 326298 CDS YP_394524.1 78778209 3763000 complement(2098226..2098975) 1 NC_007575.1 diguanylate cyclase 2098975 3763000 Suden_2015 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394524.1 2098226 R 326298 CDS YP_394525.1 78778210 3763001 complement(2098994..2099836) 1 NC_007575.1 hypothetical protein 2099836 3763001 Suden_2016 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394525.1 2098994 R 326298 CDS YP_394526.1 78778211 3763002 2099986..2101245 1 NC_007575.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 2101245 3763002 Suden_2017 Sulfurimonas denitrificans DSM 1251 3-isopropylmalate dehydratase large subunit YP_394526.1 2099986 D 326298 CDS YP_394527.1 78778212 3763003 2101331..2102377 1 NC_007575.1 OmpA/MotB protein 2102377 3763003 Suden_2018 Sulfurimonas denitrificans DSM 1251 OmpA/MotB protein YP_394527.1 2101331 D 326298 CDS YP_394528.1 78778213 3763004 2102377..2102958 1 NC_007575.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A 2102958 3763004 Suden_2019 Sulfurimonas denitrificans DSM 1251 molybdopterin-guanine dinucleotide biosynthesis protein A YP_394528.1 2102377 D 326298 CDS YP_394529.1 78778214 3762812 2103030..2103500 1 NC_007575.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2103500 moaC 3762812 moaC Sulfurimonas denitrificans DSM 1251 molybdenum cofactor biosynthesis protein MoaC YP_394529.1 2103030 D 326298 CDS YP_394530.1 78778215 3762813 2103481..2103750 1 NC_007575.1 hypothetical protein 2103750 3762813 Suden_2021 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394530.1 2103481 D 326298 CDS YP_394531.1 78778216 3762814 2103763..2104734 1 NC_007575.1 hypothetical protein 2104734 3762814 Suden_2022 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394531.1 2103763 D 326298 CDS YP_394532.1 78778217 3762815 complement(2104789..2105865) 1 NC_007575.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2105865 3762815 Suden_2023 Sulfurimonas denitrificans DSM 1251 chorismate synthase YP_394532.1 2104789 R 326298 CDS YP_394533.1 78778218 3762816 complement(2105865..2106545) 1 NC_007575.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2106545 rnc 3762816 rnc Sulfurimonas denitrificans DSM 1251 ribonuclease III YP_394533.1 2105865 R 326298 CDS YP_394534.1 78778219 3762817 complement(2106542..2106973) 1 NC_007575.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2106973 rnhA 3762817 rnhA Sulfurimonas denitrificans DSM 1251 ribonuclease H YP_394534.1 2106542 R 326298 CDS YP_394535.1 78778220 3762818 complement(2106948..2107994) 1 NC_007575.1 hypothetical protein 2107994 3762818 Suden_2026 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394535.1 2106948 R 326298 CDS YP_394536.1 78778221 3762819 complement(2107994..2108461) 1 NC_007575.1 hypothetical protein 2108461 3762819 Suden_2027 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394536.1 2107994 R 326298 CDS YP_394537.1 78778222 3762820 complement(2108532..2109578) 1 NC_007575.1 hypothetical protein 2109578 3762820 Suden_2028 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394537.1 2108532 R 326298 CDS YP_394538.1 78778223 3762821 complement(2109682..2113167) 1 NC_007575.1 hypothetical protein 2113167 3762821 Suden_2029 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394538.1 2109682 R 326298 CDS YP_394539.1 78778224 3762822 complement(2113224..2114657) 1 NC_007575.1 4Fe-4S ferredoxin 2114657 3762822 Suden_2030 Sulfurimonas denitrificans DSM 1251 4Fe-4S ferredoxin YP_394539.1 2113224 R 326298 CDS YP_394540.1 78778225 3762823 2114857..2118348 1 NC_007575.1 5-methyltetrahydrofolate--homocysteine methyltransferase 2118348 3762823 Suden_2031 Sulfurimonas denitrificans DSM 1251 5-methyltetrahydrofolate--homocysteine methyltransferase YP_394540.1 2114857 D 326298 CDS YP_394541.1 78778226 3762824 2118452..2119030 1 NC_007575.1 hypothetical protein 2119030 3762824 Suden_2032 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394541.1 2118452 D 326298 CDS YP_394542.1 78778227 3762825 complement(2119072..2120583) 1 NC_007575.1 Mg chelatase-like protein 2120583 3762825 Suden_2033 Sulfurimonas denitrificans DSM 1251 Mg chelatase-like protein YP_394542.1 2119072 R 326298 CDS YP_394543.1 78778228 3762826 complement(2120659..2121195) 1 NC_007575.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2121195 def 3762826 def Sulfurimonas denitrificans DSM 1251 peptide deformylase YP_394543.1 2120659 R 326298 CDS YP_394544.1 78778229 3762827 complement(2121211..2122260) 1 NC_007575.1 diguanylate cyclase 2122260 3762827 Suden_2035 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase YP_394544.1 2121211 R 326298 CDS YP_394545.1 78778230 3762828 complement(2122280..2122870) 1 NC_007575.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2122870 clpP 3762828 clpP Sulfurimonas denitrificans DSM 1251 ATP-dependent Clp protease proteolytic subunit YP_394545.1 2122280 R 326298 CDS YP_394546.1 78778231 3762829 complement(2122875..2124176) 1 NC_007575.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2124176 tig 3762829 tig Sulfurimonas denitrificans DSM 1251 trigger factor YP_394546.1 2122875 R 326298 CDS YP_394547.1 78778232 3762830 complement(2124348..2124809) 1 NC_007575.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2124809 lspA 3762830 lspA Sulfurimonas denitrificans DSM 1251 lipoprotein signal peptidase YP_394547.1 2124348 R 326298 CDS YP_394548.1 78778233 3763025 complement(2124802..2126142) 1 NC_007575.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2126142 glmM 3763025 glmM Sulfurimonas denitrificans DSM 1251 phosphoglucosamine mutase YP_394548.1 2124802 R 326298 CDS YP_394549.1 78778234 3763026 2126291..2127526 1 NC_007575.1 Outer membrane efflux protein 2127526 3763026 Suden_2040 Sulfurimonas denitrificans DSM 1251 Outer membrane efflux protein YP_394549.1 2126291 D 326298 CDS YP_394550.1 78778235 3763027 2127523..2128719 1 NC_007575.1 secretion protein HlyD 2128719 3763027 Suden_2041 Sulfurimonas denitrificans DSM 1251 secretion protein HlyD YP_394550.1 2127523 D 326298 CDS YP_394551.1 78778236 3763028 2128719..2129429 1 NC_007575.1 ABC transporter-like protein 2129429 3763028 Suden_2042 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394551.1 2128719 D 326298 CDS YP_394552.1 78778237 3763029 2129429..2130640 1 NC_007575.1 hypothetical protein 2130640 3763029 Suden_2043 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394552.1 2129429 D 326298 CDS YP_394553.1 78778238 3763030 2130768..2131028 1 NC_007575.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2131028 rpsT 3763030 rpsT Sulfurimonas denitrificans DSM 1251 30S ribosomal protein S20 YP_394553.1 2130768 D 326298 CDS YP_394554.1 78778239 3763031 2131043..2132110 1 NC_007575.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2132110 prfA 3763031 prfA Sulfurimonas denitrificans DSM 1251 peptide chain release factor 1 YP_394554.1 2131043 D 326298 CDS YP_394555.1 78778240 3763032 complement(2132107..2132880) 1 NC_007575.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2132880 dapF 3763032 dapF Sulfurimonas denitrificans DSM 1251 diaminopimelate epimerase YP_394555.1 2132107 R 326298 CDS YP_394556.1 78778241 3763033 complement(2132877..2133479) 1 NC_007575.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2133479 coaE 3763033 coaE Sulfurimonas denitrificans DSM 1251 dephospho-CoA kinase YP_394556.1 2132877 R 326298 CDS YP_394557.1 78778242 3763034 complement(2133479..2134024) 1 NC_007575.1 spermidine synthase 2134024 3763034 Suden_2048 Sulfurimonas denitrificans DSM 1251 spermidine synthase YP_394557.1 2133479 R 326298 CDS YP_394558.1 78778243 3763035 2134184..2135509 1 NC_007575.1 twin-arginine translocation pathway signal 2135509 3763035 Suden_2049 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_394558.1 2134184 D 326298 CDS YP_394559.1 78778244 3763036 2135870..2136865 1 NC_007575.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2136865 3763036 Suden_2050 Sulfurimonas denitrificans DSM 1251 phosphoribosylaminoimidazole synthetase YP_394559.1 2135870 D 326298 CDS YP_394560.1 78778245 3763037 complement(2136963..2137811) 1 NC_007575.1 hypothetical protein 2137811 3763037 Suden_2051 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394560.1 2136963 R 326298 CDS YP_394561.1 78778246 3763038 complement(2137808..2138821) 1 NC_007575.1 hypothetical protein 2138821 3763038 Suden_2052 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394561.1 2137808 R 326298 CDS YP_394562.1 78778247 3763039 complement(2138986..2140188) 1 NC_007575.1 aromatic hydrocarbon degradation protein 2140188 3763039 Suden_2053 Sulfurimonas denitrificans DSM 1251 aromatic hydrocarbon degradation protein YP_394562.1 2138986 R 326298 CDS YP_394563.1 78778248 3762660 2146719..2147417 1 NC_007575.1 hypothetical protein 2147417 3762660 Suden_2054 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394563.1 2146719 D 326298 CDS YP_394564.1 78778249 3762661 2147410..2147814 1 NC_007575.1 hypothetical protein 2147814 3762661 Suden_2055 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394564.1 2147410 D 326298 CDS YP_394565.1 78778250 3762662 complement(2147928..2148950) 1 NC_007575.1 Beta-lactamase-like 2148950 3762662 Suden_2056 Sulfurimonas denitrificans DSM 1251 Beta-lactamase-like YP_394565.1 2147928 R 326298 CDS YP_394566.1 78778251 3762663 complement(2149064..2149357) 1 NC_007575.1 sulfur oxidation protein SoxZ 2149357 3762663 Suden_2057 Sulfurimonas denitrificans DSM 1251 sulfur oxidation protein SoxZ YP_394566.1 2149064 R 326298 CDS YP_394567.1 78778252 3762664 complement(2149411..2149863) 1 NC_007575.1 sulfur oxidation protein 2149863 3762664 Suden_2058 Sulfurimonas denitrificans DSM 1251 sulfur oxidation protein YP_394567.1 2149411 R 326298 CDS YP_394568.1 78778253 3762665 complement(2149905..2151053) 1 NC_007575.1 diheme cytochrome c SoxD 2151053 3762665 Suden_2059 Sulfurimonas denitrificans DSM 1251 diheme cytochrome c SoxD YP_394568.1 2149905 R 326298 CDS YP_394569.1 78778254 3762666 complement(2151066..2152403) 1 NC_007575.1 twin-arginine translocation pathway signal 2152403 3762666 Suden_2060 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_394569.1 2151066 R 326298 CDS YP_394570.1 78778255 3762667 2152685..2153131 1 NC_007575.1 hypothetical protein 2153131 3762667 Suden_2061 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394570.1 2152685 D 326298 CDS YP_394571.1 78778256 3762668 complement(2153113..2153805) 1 NC_007575.1 methyl transferase 2153805 3762668 Suden_2062 Sulfurimonas denitrificans DSM 1251 methyl transferase YP_394571.1 2153113 R 326298 CDS YP_394572.1 78778257 3762669 complement(2153802..2154599) 1 NC_007575.1 hypothetical protein 2154599 3762669 Suden_2063 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394572.1 2153802 R 326298 CDS YP_394573.1 78778258 3762670 complement(2154601..2155365) 1 NC_007575.1 ABC transporter-like protein 2155365 3762670 Suden_2064 Sulfurimonas denitrificans DSM 1251 ABC transporter-like protein YP_394573.1 2154601 R 326298 CDS YP_394574.1 78778259 3762671 complement(2155362..2156276) 1 NC_007575.1 periplasmic solute binding protein 2156276 3762671 Suden_2065 Sulfurimonas denitrificans DSM 1251 periplasmic solute binding protein YP_394574.1 2155362 R 326298 CDS YP_394575.1 78778260 3762672 2156385..2156786 1 NC_007575.1 preprotein translocase subunit SecG 2156786 secG 3762672 secG Sulfurimonas denitrificans DSM 1251 preprotein translocase subunit SecG YP_394575.1 2156385 D 326298 CDS YP_394576.1 78778261 3762673 2156880..2157437 1 NC_007575.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2157437 frr 3762673 frr Sulfurimonas denitrificans DSM 1251 ribosome recycling factor YP_394576.1 2156880 D 326298 CDS YP_394577.1 78778262 3762674 2157442..2158050 1 NC_007575.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2158050 pyrE 3762674 pyrE Sulfurimonas denitrificans DSM 1251 orotate phosphoribosyltransferase YP_394577.1 2157442 D 326298 CDS YP_394578.1 78778263 3762675 2158105..2159181 1 NC_007575.1 beta-N-acetylhexosaminidase 2159181 3762675 Suden_2069 Sulfurimonas denitrificans DSM 1251 beta-N-acetylhexosaminidase YP_394578.1 2158105 D 326298 CDS YP_394579.1 78778264 3762676 2159181..2160650 1 NC_007575.1 Na+/solute symporter 2160650 3762676 Suden_2070 Sulfurimonas denitrificans DSM 1251 Na+/solute symporter YP_394579.1 2159181 D 326298 CDS YP_394580.1 78778265 3763082 2160643..2161749 1 NC_007575.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2161749 anmK 3763082 anmK Sulfurimonas denitrificans DSM 1251 anhydro-N-acetylmuramic acid kinase YP_394580.1 2160643 D 326298 CDS YP_394581.1 78778266 3763083 2161742..2162680 1 NC_007575.1 aminoglycoside phosphotransferase 2162680 3763083 Suden_2072 Sulfurimonas denitrificans DSM 1251 aminoglycoside phosphotransferase YP_394581.1 2161742 D 326298 CDS YP_394582.1 78778267 3763084 2162677..2163339 1 NC_007575.1 nucleotidyl transferase 2163339 3763084 Suden_2073 Sulfurimonas denitrificans DSM 1251 nucleotidyl transferase YP_394582.1 2162677 D 326298 CDS YP_394583.1 78778268 3763085 2163545..2164531 1 NC_007575.1 membrane-bound lytic murein transglycosylase B-like 2164531 3763085 Suden_2074 Sulfurimonas denitrificans DSM 1251 membrane-bound lytic murein transglycosylase B-like YP_394583.1 2163545 D 326298 CDS YP_394584.1 78778269 3763086 complement(2164545..2164787) 1 NC_007575.1 iron oxidase oxidoreductase 2164787 3763086 Suden_2075 Sulfurimonas denitrificans DSM 1251 iron oxidase oxidoreductase YP_394584.1 2164545 R 326298 CDS YP_394585.1 78778270 3763087 complement(2164876..2165712) 1 NC_007575.1 aldose 1-epimerase 2165712 3763087 Suden_2076 Sulfurimonas denitrificans DSM 1251 aldose 1-epimerase YP_394585.1 2164876 R 326298 CDS YP_394586.1 78778271 3763088 complement(2165699..2166979) 1 NC_007575.1 glucose/galactose transporter 2166979 3763088 Suden_2077 Sulfurimonas denitrificans DSM 1251 glucose/galactose transporter YP_394586.1 2165699 R 326298 CDS YP_394587.1 78778272 3763089 complement(2166969..2167799) 1 NC_007575.1 HAD superfamily hydrolase 2167799 3763089 Suden_2078 Sulfurimonas denitrificans DSM 1251 HAD superfamily hydrolase YP_394587.1 2166969 R 326298 CDS YP_394588.1 78778273 3763090 complement(2167803..2169422) 1 NC_007575.1 Sodium/hydrogen exchanger 2169422 3763090 Suden_2079 Sulfurimonas denitrificans DSM 1251 Sodium/hydrogen exchanger YP_394588.1 2167803 R 326298 CDS YP_394589.1 78778274 3763091 2169578..2171206 1 NC_007575.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2171206 pyrG 3763091 pyrG Sulfurimonas denitrificans DSM 1251 CTP synthetase YP_394589.1 2169578 D 326298 CDS YP_394590.1 78778275 3763092 2171219..2172832 1 NC_007575.1 RecJ exonuclease 2172832 3763092 Suden_2081 Sulfurimonas denitrificans DSM 1251 RecJ exonuclease YP_394590.1 2171219 D 326298 CDS YP_394591.1 78778276 3763093 2173055..2174530 1 NC_007575.1 twin-arginine translocation pathway signal 2174530 3763093 Suden_2082 Sulfurimonas denitrificans DSM 1251 twin-arginine translocation pathway signal YP_394591.1 2173055 D 326298 CDS YP_394592.1 78778277 3763094 2174625..2175596 1 NC_007575.1 Beta-lactamase-like 2175596 3763094 Suden_2083 Sulfurimonas denitrificans DSM 1251 Beta-lactamase-like YP_394592.1 2174625 D 326298 CDS YP_394593.1 78778278 3763095 2175687..2177828 1 NC_007575.1 hypothetical protein 2177828 3763095 Suden_2084 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394593.1 2175687 D 326298 CDS YP_394594.1 78778279 3763096 complement(2177812..2179122) 1 NC_007575.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 2179122 fliI 3763096 fliI Sulfurimonas denitrificans DSM 1251 flagellum-specific ATP synthase YP_394594.1 2177812 R 326298 CDS YP_394595.1 78778280 3763097 complement(2179150..2179689) 1 NC_007575.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2179689 folE 3763097 folE Sulfurimonas denitrificans DSM 1251 GTP cyclohydrolase I YP_394595.1 2179150 R 326298 CDS YP_394596.1 78778281 3763098 complement(2180038..2180760) 1 NC_007575.1 PAS/PAC sensor protein 2180760 3763098 Suden_2087 Sulfurimonas denitrificans DSM 1251 PAS/PAC sensor protein YP_394596.1 2180038 R 326298 CDS YP_394597.1 78778282 3763099 complement(2180801..2182534) 1 NC_007575.1 diguanylate cyclase/phosphodiesterase 2182534 3763099 Suden_2088 Sulfurimonas denitrificans DSM 1251 diguanylate cyclase/phosphodiesterase YP_394597.1 2180801 R 326298 CDS YP_394598.1 78778283 3763100 complement(2182679..2184622) 1 NC_007575.1 hypothetical protein 2184622 3763100 Suden_2089 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394598.1 2182679 R 326298 CDS YP_394599.1 78778284 3763733 complement(2184594..2185397) 1 NC_007575.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2185397 ksgA 3763733 ksgA Sulfurimonas denitrificans DSM 1251 dimethyladenosine transferase YP_394599.1 2184594 R 326298 CDS YP_394600.1 78778285 3763734 2185597..2186355 1 NC_007575.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2186355 3763734 Suden_2091 Sulfurimonas denitrificans DSM 1251 imidazole glycerol phosphate synthase subunit HisF YP_394600.1 2185597 D 326298 CDS YP_394601.1 78778286 3763735 2186365..2186910 1 NC_007575.1 hypothetical protein 2186910 3763735 Suden_2092 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394601.1 2186365 D 326298 CDS YP_394602.1 78778287 3763736 2186907..2187977 1 NC_007575.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 2187977 3763736 Suden_2093 Sulfurimonas denitrificans DSM 1251 ribosomal RNA large subunit methyltransferase N YP_394602.1 2186907 D 326298 CDS YP_394603.1 78778288 3763737 complement(2188471..2189385) 1 NC_007575.1 pseudouridine synthase 2189385 3763737 Suden_2094 Sulfurimonas denitrificans DSM 1251 pseudouridine synthase YP_394603.1 2188471 R 326298 CDS YP_394604.1 78778289 3763738 2189468..2190799 1 NC_007575.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2190799 3763738 Suden_2095 Sulfurimonas denitrificans DSM 1251 adenylosuccinate lyase YP_394604.1 2189468 D 326298 CDS YP_394605.1 78778290 3763739 2190915..2193281 1 NC_007575.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2193281 3763739 Suden_2096 Sulfurimonas denitrificans DSM 1251 ribonucleotide-diphosphate reductase subunit alpha YP_394605.1 2190915 D 326298 CDS YP_394606.1 78778291 3763740 2193272..2193652 1 NC_007575.1 hypothetical protein 2193652 3763740 Suden_2097 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394606.1 2193272 D 326298 CDS YP_394607.1 78778292 3763741 2193744..2195129 1 NC_007575.1 peptidase S1C, Do 2195129 3763741 Suden_2098 Sulfurimonas denitrificans DSM 1251 peptidase S1C, Do YP_394607.1 2193744 D 326298 CDS YP_394608.1 78778293 3763742 2195149..2195571 1 NC_007575.1 thioredoxin 2195571 3763742 Suden_2099 Sulfurimonas denitrificans DSM 1251 thioredoxin YP_394608.1 2195149 D 326298 CDS YP_394609.1 78778294 3763743 2195606..2196886 1 NC_007575.1 citrate synthase I 2196886 3763743 Suden_2100 Sulfurimonas denitrificans DSM 1251 citrate synthase I YP_394609.1 2195606 D 326298 CDS YP_394610.1 78778295 3763744 complement(2196906..2199455) 1 NC_007575.1 response regulator receiver /GGDEF/PAS/PAC domain-containing protein 2199455 3763744 Suden_2101 Sulfurimonas denitrificans DSM 1251 response regulator receiver /GGDEF/PAS/PAC domain-containing protein YP_394610.1 2196906 R 326298 CDS YP_394611.1 78778296 3763745 complement(2199610..2199921) 1 NC_007575.1 hypothetical protein 2199921 3763745 Suden_2102 Sulfurimonas denitrificans DSM 1251 hypothetical protein YP_394611.1 2199610 R 326298 CDS YP_394612.1 78778297 3763746 complement(2199948..2200913) 1 NC_007575.1 sensory box protein 2200913 3763746 Suden_2103 Sulfurimonas denitrificans DSM 1251 sensory box protein YP_394612.1 2199948 R 326298 CDS YP_394613.1 78778298 3763747 complement(2200995..2201474) 1 NC_007575.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2201474 ruvC 3763747 ruvC Sulfurimonas denitrificans DSM 1251 Holliday junction resolvase YP_394613.1 2200995 R 326298 CDS