-- dump date 20111121_015333 -- class Genbank::CDS -- table cds_note -- id note YP_003472770.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57 YP_003472771.1 KEGG: sat:SYN_02252 cytoplasmic protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: protein of unknown function DUF324 YP_003472772.1 TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: mxa:MXAN_7281 CRISPR-associated Cmr2 family protein YP_003472773.1 PFAM: CRISPR-associated protein, Cmr3 YP_003472774.1 KEGG: tgr:Tgr7_1793 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324 YP_003472775.1 KEGG: hha:Hhal_0630 CRISPR-associated Cmr5 family protein; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1 YP_003472776.1 KEGG: tgr:Tgr7_1795 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324 YP_003472778.1 TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family YP_003472779.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522 YP_003472780.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; PFAM: CRISPR-associated protein, CXXC-CXXC region YP_003472781.1 TIGRFAM: CRISPR-associated helicase Cas3; CRISPR- associated HD domain protein; PFAM: DEAD/DEAH box helicase; helicase; KEGG: ccv:CCV52592_1290 DEAD/DEAH box helicase domain-containing protein; SMART: DEAD-like helicase ; helicase domain protein YP_003472782.1 KEGG: conserved hypothetical protein YP_003472783.1 KEGG: ppd:Ppro_1460 molybdate metabolism transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003472784.1 KEGG: mca:MCA1378 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003472785.1 KEGG: nam:NAMH_0195 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003472786.1 KEGG: hhe:HH0657 molybdenum ABC transporter ATP- binding component ModC; PFAM: ABC transporter; SMART: ATPase AAA YP_003472787.1 KEGG: glo:Glov_0622 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein YP_003472788.1 PFAM: NLP/P60 protein; KEGG: dds:Ddes_1599 NLP/P60 protein YP_003472790.1 PFAM: methyltransferase type 11; tRNA methyltransferase complex GCD14 subunit; KEGG: dvm:DvMF_2378 tRNA (adenine-N(1)-)- methyltransferase YP_003472792.1 PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron- sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: gme:Gmet_3349 NADH dehydrogenase I, G subunit YP_003472793.1 PFAM: cupin; KEGG: nam:NAMH_1185 cupin domain protein YP_003472794.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: dma:DMR_43130 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain YP_003472795.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sat:SYN_01163 SAM-dependent methyltransferase YP_003472796.1 KEGG: pca:Pcar_2418 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003472797.1 PFAM: PP-loop domain protein; KEGG: dde:Dde_3611 hypothetical protein YP_003472798.1 KEGG: hypothetical LOC577126; TIGRFAM: dephospho-CoA kinase YP_003472799.1 PFAM: aminotransferase class I and II; KEGG: ank:AnaeK_2116 aminotransferase class I and II YP_003472801.1 KEGG: glo:Glov_2155 Tfp pilus assembly protein tip- associated adhesin PilY1-like protein YP_003472802.1 KEGG: dol:Dole_0486 pilin assembly protein YP_003472805.1 KEGG: sat:SYN_01086 spore maturation protein B YP_003472806.1 KEGG: ftn:FTN_0414 type IV pili, pilus assembly protein YP_003472807.1 KEGG: xfm:Xfasm12_2112 fimbrial protein YP_003472809.1 PFAM: type II and III secretion system protein; KEGG: sml:Smlt3821 type II/III pilus secretin YP_003472811.1 KEGG: pca:Pcar_2136 pilus assembly protein, PilO- like YP_003472812.1 KEGG: similar to nonmuscle myosin heavy chain ; K10352 myosin heavy chain YP_003472813.1 KEGG: sfu:Sfum_0537 type IV pilus assembly protein PilM YP_003472814.1 KEGG: gur:Gura_1291 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein YP_003472815.1 TIGRFAM: glycyl-tRNA synthetase subunit beta; KEGG: sfu:Sfum_2445 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase subunit beta YP_003472816.1 KEGG: pat:Patl_0419 hypothetical protein YP_003472817.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: gur:Gura_0234 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003472818.1 PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: afw:Anae109_4165 nuclease YP_003472819.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: mlo:mlr6609 Mg2+ transport ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_003472820.1 KEGG: afr:AFE_0124 TPR domain protein; PFAM: TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003472821.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: pmy:Pmen_3623 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003472822.1 KEGG: nis:NIS_0956 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003472823.1 PFAM: TrkA-C domain protein; KEGG: dat:HRM2_13910 proton/hydrogen exchanger family protein YP_003472824.1 PFAM: sodium/hydrogen exchanger; KEGG: pne:Pnec_1611 sodium/hydrogen exchanger YP_003472825.1 PFAM: protein of unknown function DUF374; KEGG: dol:Dole_2971 hypothetical protein YP_003472826.1 PFAM: peptidase M23; KEGG: dvm:DvMF_0414 peptidase M23 YP_003472827.1 PFAM: ribosomal L11 methyltransferase; methyltransferase type 11; methyltransferase small; RNA methylase; KEGG: vha:VIBHAR_00173 ribosomal protein L11 methyltransferase YP_003472828.1 KEGG: gur:Gura_2047 hypothetical protein YP_003472829.1 KEGG: gme:Gmet_3559 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003472830.1 PFAM: Na+/solute symporter; KEGG: eba:ebA3608 sodium/solute symporter YP_003472831.1 KEGG: sat:SYN_02926 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003472832.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: hch:HCH_05377 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003472833.1 KEGG: lhk:LHK_02666 Cpx; PFAM: Di-haem cytochrome C peroxidase YP_003472834.1 KEGG: dps:DP1484 DnaK suppressor protein; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type YP_003472835.1 PFAM: aminotransferase class I and II; KEGG: sfu:Sfum_1219 aminotransferase, class I and II YP_003472836.1 KEGG: dde:Dde_0784 ComF family protein YP_003472837.1 KEGG: nis:NIS_1708 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003472839.1 KEGG: dde:Dde_1037 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003472840.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: gbm:Gbem_0848 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003472841.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM protein; KEGG: ade:Adeh_0093 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_003472842.1 KEGG: dat:HRM2_18590 hypothetical protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003472843.1 KEGG: bmi:BMEA_A1156 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003472844.1 TIGRFAM: gid protein; KEGG: gsu:GSU2547 tRNA (uracil-5-)- methyltransferase Gid; PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase YP_003472846.1 KEGG: gme:Gmet_0134 magnesium/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein YP_003472847.1 PFAM: ROK family protein; KEGG: gme:Gmet_1639 glucokinase YP_003472849.1 KEGG: cco:CCC13826_0839 FlhB domain-containing protein YP_003472850.1 KEGG: noc:Noc_0982 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_003472851.1 KEGG: gme:Gmet_3066 hypothetical protein; PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR YP_003472853.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DEAD-like helicase; TIGRFAM: reverse gyrase; KEGG: nis:NIS_1759 reverse gyrase; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein YP_003472855.1 KEGG: dat:HRM2_12300 RpmB; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003472856.1 TIGRFAM: chorismate synthase; KEGG: pca:Pcar_2133 chorismate synthase; PFAM: chorismate synthase YP_003472857.1 PFAM: protein of unknown function DUF140; KEGG: sat:SYN_00411 ABC-type transporter involved in resistance to organic solvents, permease YP_003472858.1 PFAM: TOPRIM domain protein YP_003472860.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: nis:NIS_0215 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003472861.1 KEGG: gsu:GSU1605 3-oxoacyl-(acyl-carrier-protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase YP_003472862.1 KEGG: ppd:Ppro_1745 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003472863.1 KEGG: gur:Gura_2150 dihydroorotate dehydrogenase 1B; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase YP_003472864.1 KEGG: nis:NIS_1720 major facilitator superfamily multidrug-efflux transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003472865.1 PFAM: secretion protein HlyD; KEGG: nis:NIS_1721 major facilitator superfamily multidrug-efflux transporter YP_003472866.1 PFAM: outer membrane efflux protein; KEGG: glo:Glov_1633 outer membrane efflux protein YP_003472867.1 PFAM: regulatory protein TetR; KEGG: esa:ESA_02806 DNA-binding transcriptional repressor AcrR YP_003472868.1 PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein YP_003472869.1 KEGG: neu:NE2037 cation-efflux system signal peptide protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD YP_003472870.1 KEGG: geo:Geob_2628 polyprenyl synthetase; PFAM: polyprenyl synthetase YP_003472871.1 PFAM: phosphoglycerate mutase; KEGG: afr:AFE_0621 phosphoglycerate mutase family protein YP_003472872.1 KEGG: dvu:DVU1196 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase class I (M) YP_003472874.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: ppd:Ppro_3536 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003472875.1 PFAM: type II secretion system protein E; general secretory system II protein E domain protein; KEGG: sfu:Sfum_0117 type IV-A pilus assembly ATPase PilB YP_003472876.1 PFAM: SirA family protein; KEGG: mxa:MXAN_4068 hypothetical protein YP_003472878.1 PFAM: DsrE family protein YP_003472880.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: abu:Abu_2060 hypothetical protein YP_003472881.1 KEGG: dat:HRM2_05340 PriA YP_003472882.1 KEGG: tgr:Tgr7_3281 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent YP_003472883.1 KEGG: hde:HDEF_0123 transporter of outer membrane lipoproteins (ABC superfamily, atp_bind); PFAM: ABC transporter; SMART: ATPase AAA YP_003472884.1 PFAM: alanine racemase domain protein; KEGG: pca:Pcar_0403 PLP dependent enzymes class III- like protein YP_003472885.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: afw:Anae109_0863 molybdopterin oxidoreductase Fe4s4 region YP_003472886.1 PFAM: damage inducible protein CinA; KEGG: dps:DP2957 competence-damage inducible protein (CinA) YP_003472887.1 KEGG: dal:Dalk_1791 acyl-(acyl-carrier-protein)-- UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylglu cosamineO-acyltransferase YP_003472888.1 KEGG: pol:Bpro_3517 lipoprotein YP_003472889.1 KEGG: geo:Geob_0384 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_003472890.1 KEGG: cff:CFF8240_1615 hypothetical protein YP_003472891.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: mxa:MXAN_4718 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003472892.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: pca:Pcar_2950 suppressor of FtsH mutation; SMART: RNA-binding S4 domain protein YP_003472894.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: dar:Daro_1270 glycosyl transferase YP_003472895.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: sat:SYN_03766 hypothetical protein YP_003472896.1 KEGG: afr:AFE_3292 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase YP_003472898.1 PFAM: glycosyl transferase group 1; KEGG: ent:Ent638_2645 glycosyl transferase, group 1 YP_003472899.1 PFAM: glycosyl transferase group 1; KEGG: sbm:Shew185_2892 glycosyl transferase group 1 YP_003472900.1 KEGG: rma:Rmag_0894 methyltransferase FkbM YP_003472901.1 PFAM: glycosyl transferase group 1; KEGG: sea:SeAg_B3937 UDP-D- galactose:(glucosyl)lipopolysaccharide-1,6-D- galactosyltransfe rase YP_003472902.1 KEGG: ecp:ECP_2080 antigen polymerase YP_003472903.1 PFAM: polysaccharide biosynthesis protein; KEGG: msu:MS0657 RfbX protein YP_003472905.1 PFAM: histidine triad (HIT) protein; KEGG: pca:Pcar_1504 HIT (HINT, histidine triad) family protein YP_003472906.1 KEGG: avi:Avi_8183 ABC transporter nucleotide binding/ATPase protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003472908.1 PFAM: protein of unknown function DUF62; KEGG: sfu:Sfum_1405 hypothetical protein YP_003472909.1 KEGG: rme:Rmet_3714 hypothetical protein YP_003472910.1 KEGG: pla:Plav_2841 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003472911.1 PFAM: aminodeoxychorismate lyase; KEGG: sat:SYN_01735 4-amino-4-deoxychorismate lyase YP_003472912.1 KEGG: geo:Geob_3588 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein YP_003472914.1 KEGG: sat:SYN_01737 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003472915.1 KEGG: nmu:Nmul_A1429 O-antigen polymerase YP_003472916.1 PFAM: glycosyl transferase family 9; KEGG: gme:Gmet_2345 lipopolysaccharide heptosyltransferase II YP_003472917.1 KEGG: gme:Gmet_3277 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA YP_003472918.1 KEGG: amc:MADE_03384 response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003472919.1 KEGG: amf:AMF_566 probable GTP-binding protein EngB; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_003472920.1 KEGG: scl:sce7407 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_003472921.1 KEGG: dvm:DvMF_0046 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003472922.1 PFAM: protein of unknown function UPF0027; KEGG: pca:Pcar_0019 hypothetical protein YP_003472923.1 KEGG: dal:Dalk_2922 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain YP_003472924.1 PFAM: peptidase M23; KEGG: aeh:Mlg_1826 peptidase M23B YP_003472925.1 KEGG: gme:Gmet_1883 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003472926.1 PFAM: MGS domain protein; carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate- amine ligase domain protein ATP-grasp; protein of unknown function DUF201; carbamoyl-phosphate synthetase large chain domain protein; KEGG: pfl:PFL_0831 carbamoyl phosphate synthase large subunit YP_003472927.1 KEGG: GF10190 gene product from transcript GF10190- RA; PFAM: protein of unknown function DUF265; SMART: ATPase AAA YP_003472928.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gur:Gura_1771 tRNA delta(2)- isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003472929.1 KEGG: gur:Gura_3660 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003472930.1 KEGG: ppd:Ppro_1291 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003472931.1 KEGG: spermine synthase ; K00797 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; methyltransferase type 12 YP_003472932.1 KEGG: probable ribonuclease HI large subunit ; K10743 ribonuclease H2 subunit A; TIGRFAM: ribonuclease HIII; PFAM: ribonuclease HII/HIII YP_003472933.1 KEGG: gsu:GSU2982 TonB dependent receptor, TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003472934.1 KEGG: gur:Gura_0773 TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein YP_003472935.1 KEGG: nis:NIS_1164 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6 YP_003472936.1 KEGG: gbm:Gbem_3975 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003472937.1 KEGG: dol:Dole_0009 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003472938.1 KEGG: ppd:Ppro_0761 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like YP_003472939.1 PFAM: aldo/keto reductase; KEGG: hypothetical protein YP_003472940.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: nis:NIS_0001 chromosomal replication initiation protein; SMART: replication initiation factor DnaA; ATPase AAA YP_003472941.1 KEGG: mpt:Mpe_A0492 cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003472942.1 PFAM: protein of unknown function DUF152; KEGG: smt:Smal_3158 protein of unknown function DUF152 YP_003472943.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: kpn:KPN_00329 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase; 6-phosphogluconate dehydrogenase NAD-binding YP_003472944.1 KEGG: bba:Bd0684 aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003472945.1 TIGRFAM: adenosylhomocysteinase; KEGG: sfu:Sfum_0366 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; acetohydroxy acid isomeroreductase catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase YP_003472946.1 PFAM: protein of unknown function DUF177; KEGG: sfu:Sfum_1368 hypothetical protein YP_003472947.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: mxa:MXAN_3230 hypothetical protein YP_003472948.1 KEGG: afw:Anae109_3687 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase YP_003472949.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: mfa:Mfla_1804 excinuclease ABC subunit C; SMART: excinuclease ABC C subunit domain protein YP_003472951.1 PFAM: protein of unknown function DUF167; KEGG: asa:ASA_3628 hypothetical protein YP_003472952.1 SMART: protein phosphatase 2C domain protein; KEGG: nis:NIS_0192 protein phosphatase YP_003472953.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: sfu:Sfum_1666 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003472954.1 KEGG: avn:Avin_49350 hypothetical protein YP_003472956.1 PFAM: protein of unknown function DUF205; KEGG: mfa:Mfla_2327 acyl-phosphate glycerol-3- phosphate acyltransferase YP_003472957.1 PFAM: glycosyl transferase family 39; KEGG: dde:Dde_3122 dolichyl-phosphate-mannose- protein mannosyltransferase family protein YP_003472959.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; helicase; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; KEGG: bba:Bd2324 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase YP_003472960.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: geo:Geob_0052 CMP/dCMP deaminase zinc-binding YP_003472961.1 KEGG: gme:Gmet_2321 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia YP_003472962.1 KEGG: ppd:Ppro_1715 succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase YP_003472963.1 KEGG: rcm:A1E_03180 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein YP_003472964.1 KEGG: gur:Gura_1532 heavy metal translocating P- type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003472965.1 KEGG: ppd:Ppro_3784 protein-disulfide isomerase YP_003472966.1 TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; KEGG: nis:NIS_0586 phosphate ABC transporter ATP- binding protein; SMART: ATPase AAA YP_003472967.1 KEGG: tdn:Suden_1886 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component YP_003472968.1 KEGG: pna:Pnap_2205 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component YP_003472969.1 KEGG: nis:NIS_0582 phosphate ABC transporter substrate-binding protein; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003472970.1 KEGG: nam:NAMH_1017 exonuclease; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_003472971.1 KEGG: reh:H16_B1225 hypothetical protein YP_003472972.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; 6-phosphogluconate dehydrogenase NAD- binding; KEGG: ajs:Ajs_2163 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003472973.1 KEGG: geo:Geob_0834 FAD linked oxidase domain protein; PFAM: FAD linked oxidase YP_003472974.1 KEGG: gsu:GSU2050 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold YP_003472975.1 KEGG: afw:Anae109_1413 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_003472976.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: bxe:Bxe_A4135 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003472977.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; KEGG: ank:AnaeK_0127 50S ribosomal protein L25/general stress protein Ctc YP_003472978.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: glo:Glov_2595 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003472979.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; KEGG: ppd:Ppro_1064 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_003472980.1 SMART: KH domain protein; metal-dependent phosphohydrolase HD region; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; KEGG: geo:Geob_3590 RNA binding metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup YP_003472981.1 KEGG: pca:Pcar_2351 ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003472982.1 TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: tgr:Tgr7_1455 phenylalanyl-tRNA synthetase subunit beta YP_003472983.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: msu:MS0683 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003472984.1 PFAM: glycosyl transferase family 2; KEGG: geo:Geob_1477 glycosyl transferase family 2 YP_003472985.1 PFAM: 3-dehydroquinate synthase; KEGG: dal:Dalk_1759 3-dehydroquinate synthase YP_003472986.1 KEGG: scl:sce6237 CoA-substrate-specific enzyme activase domain-containing protein YP_003472987.1 KEGG: scl:sce6237 CoA-substrate-specific enzyme activase domain-containing protein; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_003472988.1 KEGG: hha:Hhal_1472 hypothetical protein YP_003472989.1 KEGG: gem:GM21_3765 ferrous iron transporter B; TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transporter B domain protein; Ferrous iron transport B domain protein YP_003472990.1 PFAM: FeoA family protein; KEGG: ade:Adeh_3291 hypothetical protein YP_003472991.1 KEGG: tgr:Tgr7_2206 biotin/lipoate A/B protein ligase; PFAM: CO dehydrogenase subunit beta/acetyl-CoA synthase epsilon subunit; biotin/lipoate A/B protein ligase; protein of unknown function DUF116 YP_003472992.1 PFAM: glycosyl transferase family 39; KEGG: glo:Glov_3271 glycosyl transferase family 39 YP_003472993.1 KEGG: sse:Ssed_2515 hypothetical protein YP_003472995.1 KEGG: gme:Gmet_2464 TatD-related deoxyribonuclease:radical SAM family protein; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; radical SAM protein YP_003472996.1 PFAM: protein of unknown function DUF147; KEGG: dvl:Dvul_1785 hypothetical protein YP_003472997.1 TIGRFAM: dihydropteroate synthase; KEGG: sat:SYN_02778 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003472998.1 KEGG: hypothetical protein; PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein YP_003472999.1 KEGG: nis:NIS_0606 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_003473000.1 KEGG: hypothetical protein LOC100093434 ; K10696 E3 ubiquitin-protein ligase BRE1 YP_003473001.1 SMART: ATPase AAA; TIGRFAM: ATPase, FliI/YscN family; KEGG: nis:NIS_0626 flagellar-specific ATP synthase FliI; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003473002.1 KEGG: ppd:Ppro_3508 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003473003.1 KEGG: gur:Gura_1901 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Miro domain protein; GTP-binding protein HSR1-related; Ras family protein YP_003473004.1 PFAM: radical SAM protein; KEGG: asu:Asuc_2019 radical SAM domain-containing protein YP_003473005.1 PFAM: cell wall hydrolase/autolysin; KEGG: net:Neut_1896 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin YP_003473006.1 KEGG: noc:Noc_2709 ATPase-like YP_003473007.1 TIGRFAM: porphobilinogen deaminase; KEGG: shl:Shal_3917 porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003473008.1 KEGG: sfu:Sfum_2167 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003473009.1 KEGG: sat:SYN_01521 phosphomethylpyrimidine kinase / hydroxymethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003473010.1 KEGG: geo:Geob_2097 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_003473011.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; KEGG: sun:SUN_2360 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003473012.1 KEGG: glo:Glov_0159 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX YP_003473014.1 PFAM: nitrogen regulatory protein P-II; KEGG: tbd:Tbd_2652 nitrogen regulatory protein P-II YP_003473015.1 PFAM: protein of unknown function DUF2309; KEGG: tbd:Tbd_2653 hypothetical protein YP_003473016.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tbd:Tbd_2655 NADH dehydrogenase YP_003473017.1 PFAM: silent information regulator protein Sir2; KEGG: sfu:Sfum_3557 silent information regulator protein Sir2 YP_003473018.1 KEGG: rle:pRL90152 pleiotropic regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003473019.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: sfu:Sfum_1062 endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop YP_003473020.1 PFAM: ATPase-like, ParA/MinD; KEGG: pla:Plav_2457 hypothetical protein YP_003473021.1 KEGG: sat:SYN_01251 cysteine desulfurase / selenocysteine lyase; PFAM: aminotransferase class V YP_003473022.1 PFAM: protein of unknown function DUF2227, metal- binding YP_003473024.1 PFAM: ferric-uptake regulator; KEGG: mxa:MXAN_3702 FUR family transcriptional regulator YP_003473025.1 PFAM: lytic transglycosylase catalytic; KEGG: pfs:PFLU4604 cell invasion protein YP_003473026.1 PFAM: protein of unknown function DUF420; KEGG: ank:AnaeK_0947 protein of unknown function DUF420 YP_003473027.1 KEGG: ade:Adeh_2388 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_003473028.1 PFAM: OsmC family protein; KEGG: asa:ASA_3317 hypothetical protein YP_003473029.1 KEGG: mei:Msip34_1392 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; RimK domain protein ATP-grasp; carbamoyl-phosphate synthetase large chain domain protein YP_003473030.1 PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain- containing protein; KEGG: hch:HCH_06704 pyruvate carboxylase subunit B YP_003473031.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hhe:HH1010 bacterioferritin comigratory protein Bcp YP_003473032.1 PFAM: ApbE family lipoprotein; KEGG: maq:Maqu_1825 ApbE family lipoprotein YP_003473033.1 TIGRFAM: FolC bifunctional protein; KEGG: sat:SYN_01606 folylpolyglutamate synthase / dihydrofolate synthase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003473034.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: sat:SYN_02271 cytoplasmic protein YP_003473035.1 PFAM: K potassium transporter; KEGG: gsu:GSU2485 potassium transporter family protein YP_003473036.1 KEGG: similar to ENSANGP00000010547 ; K10747 DNA ligase 1; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein YP_003473037.1 KEGG: hch:HCH_05887 UDP-N-acetylmuramyl pentapeptide synthase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003473038.1 KEGG: gur:Gura_0226 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003473039.1 TIGRFAM: NAD+ synthetase; KEGG: dma:DMR_31100 probable glutamine-dependent NAD(+) synthetase; PFAM: NAD synthase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003473040.1 PFAM: protein of unknown function DUF503; KEGG: ade:Adeh_1103 hypothetical protein YP_003473041.1 PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: pca:Pcar_0005 DNA gyrase subunit alpha; SMART: DNA gyrase/topoisomerase IV subunit A YP_003473042.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ccv:CCV52592_1136 CDP-diacylglycerol-- glycerol-3-phosphate 3-phosphatidyltransferase YP_003473043.1 PFAM: FAD dependent oxidoreductase; KEGG: ade:Adeh_0139 glycine oxidase ThiO YP_003473044.1 TIGRFAM: GTP cyclohydrolase I; KEGG: nam:NAMH_1733 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003473045.1 PFAM: protein of unknown function DUF1009; KEGG: sfu:Sfum_3750 hypothetical protein YP_003473046.1 KEGG: dde:Dde_1960 lipid A export ATP- binding/permease protein MsbA; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_003473048.1 KEGG: gem:GM21_1228 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003473049.1 KEGG: glo:Glov_0589 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003473050.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: hch:HCH_04604 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003473051.1 KEGG: nam:NAMH_1126 fumarate reductase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein YP_003473052.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xfn:XfasM23_0711 short-chain dehydrogenase/reductase SDR YP_003473053.1 KEGG: pmr:PMI1956 hypothetical protein YP_003473055.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: tgr:Tgr7_0836 protein of unknown function DUF224 cysteine-rich region domain protein YP_003473056.1 PFAM: major facilitator superfamily MFS_1; KEGG: lhk:LHK_01604 probable integral membrane transporter YP_003473057.1 KEGG: dma:DMR_28290 Rrf2 family DNA binding protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003473058.1 PFAM: conserved hypothetical protein; KEGG: nam:NAMH_0881 hypothetical protein YP_003473059.1 PFAM: periplasmic solute binding protein; KEGG: gme:Gmet_0491 periplasmic solute binding protein YP_003473060.1 KEGG: tdn:Suden_2064 ABC transporter-related protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003473061.1 KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003473062.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: gbm:Gbem_2283 arginyl-tRNA synthetase YP_003473063.1 PFAM: sporulation domain protein; KEGG: SORBIDRAFT_02g032910; hypothetical protein YP_003473064.1 KEGG: gbm:Gbem_1658 hypothetical protein; PFAM: sporulation domain protein; TPR repeat- containing protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide repeat YP_003473065.1 KEGG: pla:Plav_1237 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003473066.1 KEGG: gme:Gmet_2298 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_003473067.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor domain protein; Rho termination factor RNA-binding; KEGG: glo:Glov_1025 transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_003473068.1 KEGG: hde:HDEF_2008 GTPase involved in tRNA modification and in thiophene and furan oxidation; TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003473070.1 TIGRFAM: integral membrane protein TIGR01906; KEGG: ttu:TERTU_2907 hypothetical protein YP_003473071.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: nis:NIS_0196 signal transduction response regulator; SMART: EAL domain protein; GGDEF domain containing protein YP_003473072.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2199 short chain dehydrogenase YP_003473073.1 KEGG: gem:GM21_1751 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_003473074.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: gsu:GSU2604 penicillin tolerance protein LytB; PFAM: LytB protein YP_003473076.1 PFAM: beta-lactamase; KEGG: dal:Dalk_2360 beta-lactamase YP_003473077.1 TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pca:Pcar_1222 DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_003473078.1 PFAM: protein of unknown function DUF309; KEGG: gsu:GSU1664 hypothetical protein YP_003473079.1 PFAM: FUN14 family protein; KEGG: hypothetical protein YP_003473080.1 KEGG: tgr:Tgr7_2204 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003473081.1 KEGG: nam:NAMH_0146 pdp protein YP_003473082.1 KEGG: mms:mma_2354 heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003473083.1 KEGG: gsu:GSU0452 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003473084.1 KEGG: pca:Pcar_1727 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A YP_003473085.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; KEGG: dal:Dalk_5105 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_003473087.1 KEGG: neu:NE1148 signal peptidase II; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003473088.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: acp:A2cp1_4369 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003473089.1 KEGG: sun:SUN_2132 DNA uptake protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003473090.1 KEGG: net:Neut_1905 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003473092.1 KEGG: hpa:HPAG1_0201 transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family YP_003473093.1 KEGG: acp:A2cp1_1616 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; PP-loop domain protein; Queuosine synthesis-like; glutamine amidotransferase class-I YP_003473094.1 KEGG: mei:Msip34_1937 phosphate-selective porin O and P YP_003473095.1 TIGRFAM: alanine racemase; KEGG: pca:Pcar_2234 alanine racemase; PFAM: alanine racemase domain protein YP_003473096.1 KEGG: aeh:Mlg_0867 peptidase M48, Ste24p; PFAM: peptidase M48 Ste24p; hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat YP_003473098.1 KEGG: cja:CJA_0888 HesB/YadR/YfhF family protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003473099.1 PFAM: protein of unknown function UPF0054; KEGG: mxa:MXAN_4736 cupin domain-containing protein YP_003473100.1 PFAM: PhoH family protein; KEGG: ank:AnaeK_2813 PhoH family protein YP_003473101.1 PFAM: protein of unknown function DUF89; KEGG: dol:Dole_1580 hypothetical protein YP_003473102.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: sfu:Sfum_0659 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel YP_003473103.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: ppd:Ppro_0965 phosphoesterase domain- containing protein YP_003473104.1 KEGG: cla:Cla_0581 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase YP_003473105.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gsu:GSU3365 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M) YP_003473106.1 KEGG: tdn:Suden_1025 molybdenum cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain YP_003473107.1 KEGG: glo:Glov_2724 acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; PFAM: acetyl-CoA carboxylase, subunit alpha, conserved region YP_003473108.1 KEGG: csa:Csal_3052 twitching motility protein YP_003473109.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nmu:Nmul_A1964 Orn/DAP/Arg decarboxylase 2 YP_003473110.1 KEGG: acp:A2cp1_2566 protein of unknown function DUF1078 domain protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003473111.1 PFAM: flagellar hook capping protein; KEGG: nis:NIS_0627 flagellar hook capping protein FlgD YP_003473112.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003473113.1 KEGG: hpa:HPAG1_0201 transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003473114.1 PFAM: MscS Mechanosensitive ion channel; KEGG: gsu:GSU2357 hypothetical protein YP_003473115.1 KEGG: bav:BAV1933 Ham1 protein homolog; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_003473116.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: gur:Gura_2318 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003473117.1 KEGG: glo:Glov_0977 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein YP_003473118.1 PFAM: protein of unknown function UPF0102; KEGG: wsu:WS0451 hypothetical protein YP_003473119.1 KEGG: dma:DMR_34690 hypothetical protein YP_003473120.1 KEGG: ppd:Ppro_1098 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003473121.1 KEGG: dno:DNO_0827 chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein YP_003473122.1 KEGG: abo:ABO_1994 inorganic diphosphatase; PFAM: inorganic pyrophosphatase YP_003473123.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: aeh:Mlg_2225 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_003473124.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: net:Neut_2029 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003473125.1 KEGG: gsu:GSU1886 ribosomal subunit interface protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003473126.1 KEGG: hypothetical protein; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003473127.1 KEGG: gsu:GSU0649 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003473128.1 KEGG: aeh:Mlg_1601 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003473129.1 KEGG: bba:Bd2235 preprotein translocase YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003473130.1 KEGG: nis:NIS_1585 ubiquinol-cytochrome C oxidoreductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome C reductase, iron- sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003473131.1 PFAM: cytochrome b/b6 domain; KEGG: noc:Noc_0298 cytochrome b/b6-like YP_003473132.1 KEGG: nis:NIS_1583 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit YP_003473133.1 KEGG: pca:Pcar_2572 endonuclease; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein YP_003473134.1 KEGG: nam:NAMH_1122 hypothetical protein YP_003473135.1 PFAM: Heavy metal transport/detoxification protein; KEGG: pap:PSPA7_0090 mercuric reductase YP_003473136.1 KEGG: gem:GM21_1958 formate dehydrogenase family accessory protein FdhD YP_003473137.1 PFAM: lytic transglycosylase catalytic; KEGG: dma:DMR_39000 transglycosylase YP_003473138.1 KEGG: sme:SMa1516 NuoH2 NADH:ubiquinone oxidoreductase subunit 1 (chain H); PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003473139.1 KEGG: geo:Geob_1263 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003473140.1 TIGRFAM: NADH-quinone oxidoreductase subunit beta; KEGG: rpr:RP356 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003473141.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: vei:Veis_2813 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_003473142.1 KEGG: pca:Pcar_0186 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase (MAT) YP_003473143.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ppd:Ppro_3418 phosphoglucomutase YP_003473144.1 PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: mca:MCA0344 amino acid permease family protein YP_003473146.1 KEGG: scl:sce1668 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003473147.1 KEGG: csa:Csal_2186 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003473149.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: pca:Pcar_2199 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; protein of unknown function DUF201; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; RimK domain protein ATP-grasp YP_003473150.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: acp:A2cp1_3913 UDP-N- acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase YP_003473151.1 KEGG: sat:SYN_00888 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase YP_003473152.1 KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type YP_003473153.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: gur:Gura_1332 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003473154.1 KEGG: abu:Abu_0911 hypothetical protein YP_003473155.1 KEGG: rlt:Rleg2_0957 conserved hypothetical conserved membrane protein YP_003473156.1 PFAM: protein of unknown function DUF107; KEGG: gem:GM21_3060 protein of unknown function DUF107 YP_003473157.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; thioredoxin domain; KEGG: maq:Maqu_1818 redoxin domain-containing protein YP_003473158.1 KEGG: afr:AFE_1527 Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; GAF domain protein YP_003473159.1 PFAM: sodium symporter; KEGG: abo:ABO_2515 Na+ symporter family protein YP_003473160.1 KEGG: afw:Anae109_1309 TraR/DksA family transcriptional regulator YP_003473161.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dvm:DvMF_1315 iron-containing alcohol dehydrogenase YP_003473162.1 KEGG: tbd:Tbd_1515 hypothetical protein YP_003473163.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gsu:GSU1720 6-pyruvoyl tetrahydrobiopterin synthase family protein YP_003473165.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gme:Gmet_2720 microcin-processing peptidase 2 YP_003473166.1 PFAM: 4-vinyl reductase 4VR; KEGG: dal:Dalk_3884 sigma54 specific Fis family transcriptional regulator YP_003473167.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: nse:NSE_0463 dihydrolipoamide dehydrogenase YP_003473168.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: similar to AF138285_1 molybdopterin synthase large subunit CnxH YP_003473169.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis protein; radical SAM domain protein; KEGG: mms:mma_1977 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003473170.1 PFAM: cytochrome C class I; KEGG: tgr:Tgr7_0683 cytochrome c class I YP_003473171.1 KEGG: tgr:Tgr7_0684 hypothetical protein YP_003473172.1 PFAM: nitrogen regulatory protein P-II; KEGG: dvm:DvMF_2614 nitrogen regulatory protein P- II YP_003473173.1 PFAM: nitrogen regulatory protein P-II; KEGG: dal:Dalk_1520 nitrogen regulatory protein P- II YP_003473174.1 KEGG: afr:AFE_1538 nitrogen fixation protein, TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein YP_003473175.1 KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; radical SAM domain protein YP_003473176.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_1575 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003473177.1 PFAM: nitrogen fixation protein NifW; KEGG: cti:pRALTA_0382 nitrogen fixation accessory protein NifW YP_003473178.1 PFAM: NifZ family protein; KEGG: wsu:WS1383 nitrogen fixation protein YP_003473180.1 PFAM: pyruvate carboxyltransferase; KEGG: gbm:Gbem_2073 homocitrate synthase YP_003473181.1 PFAM: aminotransferase class V; KEGG: dol:Dole_0756 aminotransferase class V YP_003473182.1 PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; KEGG: pca:Pcar_2514 aldehyde:ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase YP_003473185.1 KEGG: afr:AFE_1527 Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; GAF domain protein YP_003473186.1 TIGRFAM: nitrogenase iron protein; KEGG: azo:azo0538 nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_003473187.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: mca:MCA0230 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_003473188.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_1464 transcriptional activator Anr YP_003473189.1 KEGG: afr:AFE_1514 hypothetical protein YP_003473190.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pna:Pnap_1585 DegT/DnrJ/EryC1/StrS aminotransferase YP_003473191.1 KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_003473192.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: lch:Lcho_1350 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_003473193.1 KEGG: lch:Lcho_1351 nitrogen fixation protein NifX; TIGRFAM: nitrogen fixation protein NifX; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_003473194.1 PFAM: TOBE domain protein; KEGG: wsu:WS1811 molybdenum-pterin-binding protein YP_003473195.1 PFAM: protein of unknown function DUF683; KEGG: rhi:NGR234_442 Y4xE YP_003473196.1 TIGRFAM: CTP synthase; KEGG: afw:Anae109_4318 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003473197.1 PFAM: thiamineS protein YP_003473198.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU3297 iron-sulfur cluster-binding protein YP_003473199.1 PFAM: peptidase M16 domain protein; KEGG: wpi:WPa_0591 peptidase, M16 family YP_003473200.1 PFAM: peptidase M16 domain protein; KEGG: sfu:Sfum_0362 peptidase M16 domain-containing protein YP_003473201.1 KEGG: gme:Gmet_1232 hypothetical protein YP_003473202.1 KEGG: predicted protein; K03797 carboxyl-terminal processing protease; PFAM: peptidase S41; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003473203.1 KEGG: gur:Gura_3306 hypothetical protein YP_003473204.1 KEGG: ecq:ECED1_1018 crossover junction endodeoxyribonuclease RusA (Holliday junction nuclease RusA) (Holliday juction resolvase) (GP67); PFAM: endodeoxyribonuclease RusA YP_003473205.1 KEGG: pnu:Pnuc_1297 peptidase M23B; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003473206.1 PFAM: acylphosphatase; KEGG: pae:PA0954 acylphosphatase YP_003473207.1 KEGG: gem:GM21_1160 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003473208.1 PFAM: protein of unknown function DUF114; KEGG: rhi:NGR_b00930 periplasmic serine protease YP_003473209.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: nis:NIS_1662 thiol peroxidase YP_003473210.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: nam:NAMH_0623 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003473212.1 PFAM: metallophosphoesterase; KEGG: geo:Geob_3589 metallophosphoesterase YP_003473213.1 KEGG: har:HEAR2575 cytidine monophosphate (CMP) kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003473214.1 PFAM: chorismate binding-like; KEGG: pay:PAU_01841 para-aminobenzoate synthase component I YP_003473215.1 KEGG: sfu:Sfum_0998 appr-1-p processing domain- containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003473216.1 KEGG: geo:Geob_2156 small GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein YP_003473217.1 PFAM: 20S proteasome A and subunit betas; KEGG: dol:Dole_2496 ATP-dependent protease peptidase subunit YP_003473218.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: gsu:GSU3379 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related YP_003473219.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: aeh:Mlg_0167 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: amidase YP_003473220.1 KEGG: gbm:Gbem_2748 peptidase M22 glycoprotease YP_003473221.1 PFAM: ATP-binding region ATPase domain protein; KEGG: nam:NAMH_0392 histidine kinase YP_003473222.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: lch:Lcho_0341 peptidase S8 and S53 subtilisin kexin sedolisin YP_003473223.1 PFAM: Flavocytochrome C sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: dar:Daro_1813 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit YP_003473224.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nis:NIS_0033 sulfur oxidation protein, Rieske- I iron sulfur protein SoxL YP_003473225.1 KEGG: scl:sce7246 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003473226.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: cbc:CbuK_0498 guanylate kinase; PFAM: guanylate kinase YP_003473227.1 KEGG: hch:HCH_06314 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_003473228.1 KEGG: bvi:Bcep1808_2445 integral membrane protein- like protein YP_003473229.1 PFAM: lytic transglycosylase catalytic; KEGG: mxa:MXAN_4034 transglycosylase SLT domain- containing protein YP_003473230.1 KEGG: dde:Dde_3180 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003473231.1 KEGG: mxa:MXAN_7013 hypothetical protein YP_003473232.1 PFAM: peptidase M28; KEGG: hypothetical protein YP_003473233.1 KEGG: cha:CHAB381_1449 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003473234.1 PFAM: OmpA/MotB domain protein; KEGG: dma:DMR_43090 outer membrane protein YP_003473235.1 PFAM: aminotransferase class I and II; KEGG: msu:MS1248 AvtA protein YP_003473237.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sat:SYN_00921 outer membrane protein YP_003473238.1 KEGG: gsu:GSU0859 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003473239.1 PFAM: thioesterase; KEGG: dma:DMR_06370 thioesterase superfamily domain protein YP_003473240.1 KEGG: glo:Glov_1212 N-(5'- phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003473243.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: dal:Dalk_1108 oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM domain protein; HemN domain protein YP_003473244.1 KEGG: sat:SYN_00550 rod shape-determining protein; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003473245.1 PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein YP_003473246.1 KEGG: dal:Dalk_0743 hypothetical protein YP_003473247.1 KEGG: lch:Lcho_0656 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; Ras family protein YP_003473248.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ppd:Ppro_3080 N-acetyl-gamma-glutamyl- phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region YP_003473249.1 PFAM: ribosomal protein S9; KEGG: spe:Spro_4348 30S ribosomal protein S9 YP_003473250.1 KEGG: noc:Noc_2836 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003473251.1 PFAM: conserved hypothetical protein YP_003473252.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: glo:Glov_1761 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003473253.1 KEGG: rme:Rmet_5488 exonuclease YP_003473255.1 KEGG: psa:PST_3196 hypothetical protein YP_003473256.1 KEGG: sfu:Sfum_0411 helicase domain-containing protein; PFAM: helicase; SNF2-related protein; type III restriction protein res subunit; SMART: helicase; DEAD-like helicase YP_003473258.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: MDN1; Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP- dependent remodeling of 60S subunits and subsequent export from nucleoplasm to -TRUNCATED- YP_003473259.1 PFAM: protein of unknown function DUF534; KEGG: dps:DP3100 hypothetical protein YP_003473260.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: avn:Avin_42670 sensory histidine protein kinase CbrA; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003473261.1 KEGG: sat:SYN_01093 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA YP_003473262.1 PFAM: Domain of unknown function DUF1791; KEGG: tgr:Tgr7_3212 domain of unknown function DUF1791 YP_003473263.1 KEGG: glo:Glov_1175 outer membrane porin FmdC YP_003473264.1 PFAM: Ppx/GppA phosphatase; KEGG: mxa:MXAN_5759 Ppx/GppA family phosphatase YP_003473265.1 KEGG: vsa:VSAL_I0486 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003473266.1 KEGG: sat:SYN_00807 cytoplasmic protein YP_003473267.1 KEGG: eic:NT01EI_2429 flagellar motor switch protein FliN, TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_003473268.1 KEGG: dde:Dde_2148 chemotaxis protein CheZ YP_003473269.1 KEGG: dze:Dd1591_1545 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003473270.1 KEGG: nam:NAMH_0679 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003473271.1 KEGG: bgl:bglu_2g19950 methyl-accepting chemotaxis protein YP_003473272.1 KEGG: nis:NIS_0602 chemotactic response regulator CheV; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein YP_003473273.1 KEGG: nis:NIS_0604 chemotaxis sensor histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein YP_003473274.1 KEGG: lip:LI1170 chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003473275.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: SORBIDRAFT_03g013590; hypothetical protein YP_003473276.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hps:HPSH_02945 hypothetical protein YP_003473277.1 KEGG: geo:Geob_2894 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase-like YP_003473278.1 KEGG: sat:SYN_03850 hypothetical protein YP_003473279.1 PFAM: peptidase C39 bacteriocin processing; KEGG: sat:SYN_03849 hypothetical protein YP_003473280.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: dal:Dalk_4127 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; Nicotinamide mononucleotide adenylyltransferase-like YP_003473281.1 KEGG: hha:Hhal_1967 sulfate transporter; TIGRFAM: sulfate transporter; PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease YP_003473282.1 PFAM: CDP-alcohol phosphatidyltransferase; phosphatidate cytidylyltransferase; KEGG: pca:Pcar_1307 phosphatidylglycerophosphate synthase YP_003473283.1 PFAM: phosphatidylglycerophosphatase A; KEGG: ilo:IL2139 phosphatidylglycerophosphatase A YP_003473284.1 PFAM: ribonuclease BN; KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein YP_003473285.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ade:Adeh_2548 L-lysine 2,3-aminomutase; PFAM: radical SAM protein YP_003473286.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: ank:AnaeK_2769 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003473288.1 KEGG: geo:Geob_0889 general secretion pathway protein K YP_003473289.1 KEGG: dat:HRM2_11400 GspG1; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_003473292.1 PFAM: lytic transglycosylase catalytic; KEGG: ppd:Ppro_0193 lytic transglycosylase, catalytic YP_003473293.1 PFAM: NurA domain YP_003473294.1 PFAM: Auxin Efflux Carrier; KEGG: cff:CFF8240_0756 integral membrane protein YP_003473295.1 KEGG: sat:SYN_00104 virulence factor protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE YP_003473296.1 KEGG: gem:GM21_0771 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003473297.1 PFAM: protein of unknown function DUF214; KEGG: pla:Plav_2534 hypothetical protein YP_003473298.1 KEGG: psa:PST_2519 membrane fusion protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003473299.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lpc:LPC_1299 enoyl reductase YP_003473300.1 TIGRFAM: predicted phospho-2-dehydro-3- deoxyheptonate aldolase; KEGG: dma:DMR_19010 aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003473301.1 KEGG: vco:VC0395_0327 tonB1 protein YP_003473302.1 KEGG: bau:BUAPTUC7_107 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_003473303.1 TIGRFAM: argininosuccinate synthase; KEGG: hypothetical protein ; K01940 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003473304.1 TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: hypothetical protein ; K03785 3- dehydroquinate dehydratase I; PFAM: dehydroquinase class I YP_003473305.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: tau:Tola_2593 uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003473306.1 TIGRFAM: N2,N2-dimethylguanosine tRNA methyltransferase; KEGG: similar to Probable N(2),N(2)- dimethylguanosine tRNA methyltransferase (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) ; K00555 tRNA (guani-TRUNCATED-; PFAM: N2N2-dimethylguanosine tRNA methyltransferase YP_003473307.1 KEGG: hypothetical protein YP_003473308.1 KEGG: ank:AnaeK_3579 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_003473309.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: scl:sce8319 hypothetical protein YP_003473310.1 PFAM: cytochrome C assembly protein; KEGG: gme:Gmet_3232 cytochrome C assembly protein YP_003473311.1 KEGG: gem:GM21_2661 shikimate kinase; PFAM: shikimate kinase YP_003473312.1 PFAM: SMC domain protein; KEGG: vvy:VVA0587 exonuclease SbcC YP_003473313.1 KEGG: afw:Anae109_2145 nuclease SbcCD, D subunit; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_003473314.1 PFAM: conserved hypothetical protein; KEGG: tdn:Suden_0709 hypothetical protein YP_003473316.1 PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0211 acriflavin resistance protein YP_003473317.1 KEGG: abo:ABO_0807 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003473318.1 PFAM: nucleoside diphosphate kinase; KEGG: cff:CFF8240_0233 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003473320.1 PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: gem:GM21_4038 ATP synthase F1 subunit delta YP_003473321.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: YALI0A17853p YP_003473322.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nam:NAMH_0317 H+-transporting two- sector ATPase, B/B' subunit YP_003473323.1 TIGRFAM: ribose 5-phosphate isomerase B; sugar- phosphate isomerase, RpiB/LacA/LacB family; KEGG: sfu:Sfum_1376 RpiB/LacA/LacB family sugar- phosphate isomerase; PFAM: ribose/galactose isomerase YP_003473324.1 KEGG: sfu:Sfum_1705 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; GatB central domain protein YP_003473325.1 KEGG: noc:Noc_2496 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003473326.1 PFAM: protein of unknown function DUF178; KEGG: dde:Dde_0796 hypothetical protein YP_003473327.1 PFAM: 17 kDa surface antigen; KEGG: hch:HCH_02788 hypothetical protein YP_003473328.1 PFAM: extracellular solute-binding protein family 5; KEGG: pca:Pcar_1870 dipeptide transporter YP_003473329.1 KEGG: gene 11-1 protein precursor YP_003473331.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gsu:GSU2060 PmbA protein YP_003473332.1 PFAM: phosphatidate cytidylyltransferase; KEGG: nis:NIS_1667 phosphatidate cytidylyltransferase YP_003473333.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: cvi:CV_2200 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003473334.1 PFAM: hypothetical protein; KEGG: geo:Geob_1555 tol-pal system protein YbgF YP_003473335.1 PFAM: septum formation initiator; KEGG: mca:MCA2516 septum formation initiator family protein YP_003473336.1 TIGRFAM: enolase; KEGG: gsu:GSU2286 phosphopyruvate hydratase; PFAM: enolase YP_003473337.1 PFAM: protein of unknown function DUF191; KEGG: ppd:Ppro_3279 hypothetical protein YP_003473338.1 KEGG: gme:Gmet_2355 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003473339.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH) YP_003473340.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bgl:bglu_1g13510 ATP-dependent protease ATP- binding subunit; SMART: ATPase AAA YP_003473341.1 TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; KEGG: gsu:GSU1792 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003473342.1 KEGG: sfu:Sfum_0101 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein YP_003473343.1 KEGG: mxa:MXAN_0469 foldase protein PrsA YP_003473344.1 PFAM: SurA domain; KEGG: apl:APL_0400 peptidyl-prolyl cis-trans isomerase SurA YP_003473345.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_A2367 glycosyl transferase, group 1; phosphatidylinositol N- acetylglucosaminyltransferase YP_003473346.1 KEGG: bba:Bd3036 nitrogen regulation protein NtrY; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003473349.1 KEGG: tgr:Tgr7_0162 thioredoxin domain protein YP_003473350.1 KEGG: gur:Gura_2505 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003473351.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rhi:NGR_b21290 probable oxidoreductase protein YP_003473352.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: ppu:PP_0401 dimethyladenosine transferase; SMART: ribosomal RNA adenine methylase transferase- like YP_003473353.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: dar:Daro_0864 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003473354.1 KEGG: pca:Pcar_3121 hypothetical protein YP_003473355.1 PFAM: protein of unknown function DUF185; KEGG: glo:Glov_0383 protein of unknown function DUF185 YP_003473356.1 PFAM: histidine triad (HIT) protein; KEGG: lpf:lpl2682 hypothetical protein YP_003473357.1 KEGG: ilo:IL2124 ArsC/ArsR fusion protein; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003473358.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: afr:AFE_2531 LysR family transcriptional regulator YP_003473359.1 KEGG: hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003473360.1 PFAM: protein of unknown function DUF343; KEGG: pca:Pcar_1262 hypothetical protein YP_003473361.1 KEGG: gsu:GSU0398 phage shock protein E, PFAM: rhodanese; SMART: rhodanese YP_003473362.1 PFAM: protein of unknown function DUF255; KEGG: mxa:MXAN_5954 hypothetical protein YP_003473364.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: gsu:GSU1132 cell division protein FtsY; SMART: ATPase AAA YP_003473365.1 SMART: peptidase S16; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: gur:Gura_0691 ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein; ATPase AAA YP_003473366.1 KEGG: similar to viral A-type inclusion protein YP_003473367.1 KEGG: sfu:Sfum_1218 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_003473368.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: gsu:GSU3374 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; thiamine monophosphate synthase YP_003473369.1 PFAM: organic solvent tolerance protein; KEGG: gme:Gmet_2474 organic solvent tolerance protein YP_003473370.1 KEGG: cvi:CV_4177 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003473371.1 KEGG: neu:NE0409 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003473372.1 KEGG: sfu:Sfum_1562 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16 YP_003473373.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; KEGG: pca:Pcar_0707 30S ribosomal protein S3; SMART: KH domain protein YP_003473374.1 KEGG: pca:Pcar_0706 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003473375.1 KEGG: sfu:Sfum_1559 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003473376.1 KEGG: ppd:Ppro_0683 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003473377.1 PFAM: ribosomal protein L25/L23; KEGG: nmn:NMCC_2003 50S ribosomal protein L23 YP_003473378.1 PFAM: ribosomal protein L4/L1e; KEGG: sfu:Sfum_1556 ribosomal protein L4/L1e YP_003473379.1 KEGG: dde:Dde_2257 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003473380.1 KEGG: pub:SAR11_1118 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003473381.1 KEGG: nis:NIS_0260 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein YP_003473382.1 KEGG: nis:NIS_0272 elongation factor G; TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV YP_003473383.1 KEGG: dvl:Dvul_1769 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003473384.1 KEGG: sfu:Sfum_1551 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003473385.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 4; KEGG: afw:Anae109_2220 DNA-directed RNA polymerase, beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_003473386.1 TIGRFAM: DNA-directed RNA polymerase subunit beta; KEGG: geo:Geob_3632 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase subunit beta, external 1 domain YP_003473387.1 KEGG: gsu:GSU2864 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12 YP_003473388.1 PFAM: ribosomal protein L10; KEGG: dol:Dole_0700 ribosomal protein L10 YP_003473389.1 KEGG: gme:Gmet_0616 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003473390.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; KEGG: abo:ABO_0374 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_003473391.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: cvi:CV_4198 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein YP_003473392.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: dma:DMR_31220 preprotein translocase SecE subunit YP_003473393.1 KEGG: pca:Pcar_0687 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003473394.1 KEGG: nis:NIS_0260 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein YP_003473395.1 KEGG: sat:SYN_02641 cofactor-independent phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein YP_003473396.1 KEGG: dat:HRM2_18920 CcmC2; TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein YP_003473397.1 KEGG: pha:PSHAb0434 hypothetical protein; PFAM: EAL domain protein; metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_003473398.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: ppd:Ppro_1595 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_003473399.1 PFAM: dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: gur:Gura_2151 oxidoreductase FAD/NAD(P)- binding subunit YP_003473400.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b21263 mureinpeptideoligopeptide ABC transporter permease YP_003473401.1 KEGG: hypothetical protein YP_003473402.1 KEGG: afw:Anae109_4445 hypothetical protein YP_003473403.1 PFAM: protein of unknown function DUF88; KEGG: pla:Plav_2865 hypothetical protein YP_003473404.1 KEGG: tbd:Tbd_1856 FMN adenylyltransferase / riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; cytidylyltransferase; riboflavin kinase YP_003473406.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: pmr:PMI0891 isocitrate dehydrogenase YP_003473407.1 KEGG: pca:Pcar_1405 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein YP_003473408.1 KEGG: shw:Sputw3181_2440 3-oxoacyl-(acyl-carrier- protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase YP_003473409.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; KEGG: geo:Geob_3451 queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase YP_003473410.1 SMART: Tetratricopeptide repeat YP_003473411.1 KEGG: ppd:Ppro_3423 flagellar basal-body rod protein FlgB YP_003473412.1 KEGG: nis:NIS_0622 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003473413.1 KEGG: net:Neut_0748 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003473414.1 KEGG: nis:NIS_0624 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein YP_003473415.1 PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: nis:NIS_0607 flagellar motor switch protein FliM YP_003473416.1 PFAM: nitrogen regulatory protein P-II YP_003473417.1 PFAM: protein of unknown function DUF897; KEGG: mpt:Mpe_A0139 hypothetical protein YP_003473418.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sfu:Sfum_3612 cobalamin synthesis protein, P47K YP_003473420.1 KEGG: hhe:HH0548 pyruvate flavodoxin oxidoreductase subunit delta YP_003473421.1 KEGG: rfr:Rfer_2187 2-oxoacid:acceptor oxidoreductase, subunit gamma, pyruvate/2-ketoisovalerate; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, subunit gamma; PFAM: pyruvate/ketoisovalerate oxidoreductase YP_003473422.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: wsu:WS2128 ferrodoxin oxidoreductase subunit beta YP_003473423.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rfr:Rfer_2186 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_003473424.1 PFAM: CO dehydrogenase subunit beta/acetyl-CoA synthase subunit epsilon YP_003473425.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate/ketoisovalerate oxidoreductase; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003473426.1 KEGG: dat:HRM2_41100 PorB3; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003473427.1 PFAM: pentapeptide repeat protein; KEGG: hypothetical protein YP_003473429.1 KEGG: gbm:Gbem_0751 leucyl-tRNA synthetase YP_003473430.1 PFAM: aminotransferase class IV; KEGG: cbc:CbuK_1649 branched-chain amino acid aminotransferase YP_003473431.1 PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; KEGG: ppd:Ppro_0663 HhH-GPD family protein; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003473432.1 KEGG: hpa:HPAG1_0201 transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family YP_003473433.1 KEGG: dal:Dalk_3607 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; Quinolinate phosphoribosyl transferase YP_003473434.1 TIGRFAM: acetylglutamate kinase; KEGG: sfu:Sfum_0064 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003473435.1 KEGG: sfu:Sfum_3641 small GTP-binding protein; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP- binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; Miro domain protein YP_003473436.1 PFAM: glycine cleavage H-protein; KEGG: afr:AFE_2869 glycine cleavage system protein H YP_003473437.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: cti:RALTA_A0312 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_003473438.1 PFAM: protein of unknown function methylase KEGG: sat:SYN_00910 adenine-specific methyltransferase YP_003473439.1 KEGG: nis:NIS_1526 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_003473440.1 KEGG: ngo:NGO0296 translation initiation factor IF- 3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_003473441.1 KEGG: gem:GM21_3484 hypothetical protein YP_003473442.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_3508 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003473443.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; KEGG: cha:CHAB381_0023 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_003473444.1 TIGRFAM: malate dehydrogenase, NAD-dependent; KEGG: scl:sce1050 malate dehydrogenase; PFAM: lactate/malate dehydrogenase YP_003473445.1 KEGG: afr:AFE_0423 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein YP_003473447.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: bml:BMA10229_A2974 aspartate alpha- decarboxylase; PFAM: aspartate decarboxylase YP_003473448.1 KEGG: hhe:HH0606 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_003473449.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: cla:Cla_0025 ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein YP_003473450.1 KEGG: hypothetical protein LOC100250896 ; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; ATPase AAA; UvrB/UvrC protein; ATPase AAA; Clp domain protein; SMART: ATPase AAA YP_003473451.1 KEGG: ade:Adeh_0674 condensin subunit Smc; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003473453.1 TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; KEGG: sfu:Sfum_0065 ATP-dependent protease ATP- binding subunit HslU; SMART: ATPase AAA YP_003473455.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: mxa:MXAN_2657 uroporphyrinogen-III synthase YP_003473456.1 PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: gbm:Gbem_0901 UDP-3-0-acyl N- acetylglucosamine deacetylase YP_003473457.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3286 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003473458.1 PFAM: RNA binding S1 domain protein; KEGG: mxa:MXAN_3793 30S ribosomal protein S1 YP_003473459.1 PFAM: histone family protein DNA-binding protein; KEGG: dde:Dde_2058 histone-like DNA-binding protein YP_003473460.1 KEGG: nis:NIS_1760 hypothetical protein YP_003473461.1 PFAM: protein of unknown function DUF490; KEGG: son:SO_2113 hypothetical protein YP_003473463.1 KEGG: dal:Dalk_4475 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003473464.1 KEGG: gme:Gmet_1634 transglutaminase-like; PFAM: transglutaminase; SMART: transglutaminase YP_003473465.1 KEGG: hpb:HELPY_1012 cyclopropane-fatty-acyl- phospholipid synthase (cyclopropane fatty acid synthase) (CFA synthase); PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 11 YP_003473466.1 KEGG: afw:Anae109_1977 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003473467.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: rec:RHECIAT_CH0002735 hypothetical protein YP_003473468.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: noc:Noc_2982 CDP-alcohol phosphatidyltransferase YP_003473469.1 TIGRFAM: urease, subunit gamma; KEGG: pcr:Pcryo_0880 urease subunit gamma; PFAM: Urease subunit gamma region YP_003473470.1 KEGG: dal:Dalk_0556 ribulose-phosphate 3-epimerase YP_003473471.1 KEGG: mms:mma_3084 sulfonate/nitrate transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003473472.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mlo:mlr7114 ABC transporter permease YP_003473473.1 KEGG: reu:Reut_B4888 ABC transporter substrate- binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; NLPA lipoprotein YP_003473474.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: agmatinase YP_003473475.1 TIGRFAM: urease, subunit gamma; KEGG: pcr:Pcryo_0880 urease subunit gamma; PFAM: Urease subunit gamma region YP_003473476.1 KEGG: ara:Arad_8301 UreA or short-chain amide ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_003473477.1 PFAM: ABC transporter; KEGG: ttu:TERTU_4197 UreA ABC transporter ATP- binding protein UrtD YP_003473478.1 KEGG: bcm:Bcenmc03_5670 UreA ABC transporter permease protein UrtC; TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator YP_003473479.1 PFAM: inner-membrane translocator; KEGG: rlg:Rleg_3317 UreA ABC transporter permease UrtB YP_003473480.1 KEGG: scl:sce5579 branched-chain amino acid transporter substrate-binding protein; TIGRFAM: urea ABC transporter urea binding protein; PFAM: extracellular ligand-binding receptor YP_003473481.1 TIGRFAM: urease subunit beta; KEGG: hac:Hac_1532 urease subunit alpha; PFAM: Urease subunit beta YP_003473482.1 KEGG: ttu:TERTU_4206 urease, subunit alpha; TIGRFAM: urease, subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein YP_003473483.1 KEGG: smd:Smed_2379 urease accessory protein UreE YP_003473484.1 KEGG: hac:Hac_1536 hypothetical protein YP_003473485.1 KEGG: dma:DMR_26510 fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003473486.1 PFAM: Urease accessory protein UreD; KEGG: hac:Hac_1538 urease accessory protein UreD YP_003473487.1 KEGG: bmj:BMULJ_00743 urease accessory protein; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_003473488.1 KEGG: afe:Lferr_1890 hypothetical protein YP_003473489.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sfu:Sfum_3077 CDP-alcohol phosphatidyltransferase YP_003473490.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: geo:Geob_0561 L-seryl-tRNA(sec) selenium transferase; PFAM: pyridoxal phosphate-dependent transferase YP_003473491.1 KEGG: dde:Dde_3173 selenocysteine-specific translation elongation factor SelB; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; elongation factor Tu domain 2 protein YP_003473492.1 SMART: GGDEF domain containing protein; CBS domain containing protein; GAF domain protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: wsu:WS0964 hypothetical protein; PFAM: GGDEF domain containing protein; CBS domain containing protein; PAS fold domain protein; hypothetical protein YP_003473493.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_1058 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003473494.1 KEGG: dal:Dalk_4651 radical SAM enzyme, Cfr family; TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein YP_003473495.1 TIGRFAM: signal peptidase I; KEGG: mca:MCA1465 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_003473496.1 KEGG: glo:Glov_3524 beta-lactamase YP_003473499.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; methyltransferase type 12; RNA-binding S4 domain protein; KEGG: gem:GM21_1580 hemolysin A; SMART: RNA-binding S4 domain protein YP_003473500.1 PFAM: protein of unknown function YGGT; KEGG: hha:Hhal_0947 protein of unknown function YGGT YP_003473501.1 KEGG: nis:NIS_0250 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003473502.1 TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase subunit alpha domain protein; RNA polymerase dimerisation; KEGG: sfu:Sfum_1582 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003473503.1 TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: nam:NAMH_1696 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003473504.1 KEGG: scl:sce7938 hypothetical protein; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003473505.1 KEGG: dde:Dde_2234 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003473506.1 KEGG: pca:Pcar_0724 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_003473507.1 KEGG: mxa:MXAN_3321 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003473508.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: afw:Anae109_1933 methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003473509.1 KEGG: gsu:GSU2836 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_003473510.1 KEGG: sat:SYN_01595 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003473511.1 KEGG: sfu:Sfum_1574 ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003473512.1 KEGG: smt:Smal_0774 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003473513.1 KEGG: gme:Gmet_0643 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003473514.1 KEGG: hypothetical protein ; K02881 large subunit ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003473515.1 KEGG: glo:Glov_1361 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain YP_003473516.1 PFAM: ribosomal protein S8; KEGG: gur:Gura_1080 30S ribosomal protein S8 YP_003473517.1 PFAM: ribosomal protein S14; KEGG: sfu:Sfum_1568 ribosomal protein S14 YP_003473518.1 PFAM: ribosomal protein L5; KEGG: mca:MCA2360 50S ribosomal protein L5 YP_003473519.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: sfu:Sfum_1566 ribosomal protein L24; SMART: KOW domain protein YP_003473520.1 KEGG: lip:LI0969 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003473521.1 KEGG: glo:Glov_0625 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003473522.1 PFAM: protein of unknown function DUF302; KEGG: tbd:Tbd_0905 hypothetical protein YP_003473523.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: nis:NIS_1828 sulfur oxidation protein SoxB YP_003473524.1 KEGG: tgr:Tgr7_0858 hypothetical protein YP_003473525.1 KEGG: dar:Daro_3130 hypothetical protein YP_003473526.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: nis:NIS_1830 hypothetical protein YP_003473527.1 KEGG: nis:NIS_1831 sulfur oxidation protein SoxY YP_003473528.1 PFAM: thioredoxin domain; KEGG: pnu:Pnuc_0081 protein-disulfide reductase YP_003473529.1 KEGG: hpa:HPAG1_0201 transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB YP_003473530.1 PFAM: transposase IS200-family protein; KEGG: plu:plu1338 transposase IS200 YP_003473531.1 PFAM: sodium/hydrogen exchanger; KEGG: sun:SUN_0480 NhaA family Na(+)/H(+) antiporter YP_003473532.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: wbm:Wbm0355 dUTPase; PFAM: deoxyUTP pyrophosphatase YP_003473533.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: gsu:GSU1593 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup YP_003473534.1 KEGG: smd:Smed_3445 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003473535.1 KEGG: tcx:Tcr_1856 heavy metal efflux pump CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003473536.1 KEGG: pmy:Pmen_1176 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein YP_003473537.1 PFAM: outer membrane efflux protein; KEGG: mei:Msip34_2247 cyclic nucleotide-binding protein YP_003473538.1 PFAM: thioesterase; KEGG: pca:Pcar_1492 thioesterase YP_003473539.1 KEGG: nis:NIS_0523 cyclic nucleotide binding protein; PFAM: Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase SMART: cyclic nucleotide-binding; CBS domain containing protein YP_003473540.1 KEGG: dma:DMR_19750 sodium/solute symporter family protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003473541.1 PFAM: protein of unknown function DUF485; KEGG: nis:NIS_0525 hypothetical protein YP_003473542.1 KEGG: ade:Adeh_3396 acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003473543.1 KEGG: ppd:Ppro_2489 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_003473544.1 PFAM: protein of unknown function DUF208; KEGG: sun:SUN_1113 hypothetical protein YP_003473545.1 KEGG: nis:NIS_0704 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003473546.1 KEGG: nis:NIS_0776 hypothetical protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_003473547.1 PFAM: radical SAM protein; KEGG: tbd:Tbd_1951 radical SAM family Fe-S oxidoreductase YP_003473548.1 PFAM: PSP1 domain protein; KEGG: gsu:GSU2231 hypothetical protein YP_003473549.1 KEGG: hch:HCH_02670 DNA polymerase III delta prime subunit YP_003473550.1 KEGG: pmu:PM1091 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; RimK domain protein ATP-grasp; carbamoyl-phosphate synthetase large chain domain protein YP_003473551.1 KEGG: sfu:Sfum_0543 pyruvate/ketoisovalerate oxidoreductase, subunit gamma; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, subunit gamma; PFAM: pyruvate/ketoisovalerate oxidoreductase YP_003473552.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sat:SYN_00691 pyruvate synthase subunit YP_003473553.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; transketolase; KEGG: hhe:HH0547 pyruvate flavodoxin oxidoreductase subunit alpha YP_003473554.1 PFAM: CO dehydrogenase subunit beta/acetyl-CoA synthase subunit epsilon YP_003473555.1 KEGG: glo:Glov_1146 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003473556.1 KEGG: sun:SUN_0162 sodium-driven multidrug efflux pump protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003473557.1 PFAM: patatin; KEGG: wsu:WS1459 hypothetical protein YP_003473558.1 KEGG: wsu:WS2158 hypothetical protein YP_003473559.1 PFAM: acriflavin resistance protein; KEGG: gur:Gura_4228 acriflavin resistance protein YP_003473560.1 KEGG: gur:Gura_4229 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003473561.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_4230 outer membrane efflux protein YP_003473562.1 KEGG: sat:SYN_01561 queuosine biosynthesis protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003473563.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS; KEGG: pca:Pcar_2680 mismatch repair ATPase; SMART: DNA mismatch repair protein MutS; MutS III domain protein; Smr protein/MutS2 YP_003473564.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003473565.1 PFAM: protein of unknown function DUF28; KEGG: dps:DP2908 hypothetical protein YP_003473566.1 KEGG: ppr:PBPRB0241 translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP YP_003473567.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: sat:SYN_00640 replicative DNA helicase; SMART: ATPase AAA YP_003473568.1 KEGG: afr:AFE_2057 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003473569.1 KEGG: hypothetical protein YP_003473570.1 KEGG: gsu:GSU3095 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003473571.1 PFAM: NUDIX hydrolase; KEGG: nis:NIS_1286 NUDIX hydrolase YP_003473572.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ppf:Pput_3909 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003473573.1 PFAM: protein of unknown function UPF0278; KEGG: noc:Noc_1414 hypothetical protein YP_003473574.1 PFAM: ATP dependent DNA ligase; KEGG: noc:Noc_1413 ATP-dependent DNA ligase YP_003473575.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: dol:Dole_2310 signal recognition particle protein; SMART: ATPase AAA YP_003473576.1 KEGG: sat:SYN_01301 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003473577.1 PFAM: EAL domain protein; KEGG: ttu:TERTU_4270 motility regulator YP_003473578.1 KEGG: glo:Glov_0977 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003473579.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: gbm:Gbem_3400 glycogen/starch synthase, ADP- glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003473580.1 PFAM: hypothetical protein; KEGG: TPR Domain containing protein YP_003473582.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: har:HEAR2349 sulfite:cytochrome C oxidoreductase subunit A YP_003473583.1 KEGG: har:HEAR2348 cytochrome C oxidoreductase subunit B YP_003473584.1 KEGG: pca:Pcar_1333 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003473585.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dat:HRM2_18100 permease YP_003473588.1 PFAM: GrpE protein; KEGG: bmi:BMEA_A0177 protein GrpE YP_003473589.1 KEGG: dma:DMR_21290 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003473590.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: dat:HRM2_22190 ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_003473591.1 KEGG: sat:SYN_00075 cysteinyl-tRNA synthetase; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003473592.1 KEGG: dat:HRM2_42350 TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003473593.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dat:HRM2_42340 TatB YP_003473594.1 KEGG: gsu:GSU0440 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy- lyase; PFAM: flavoprotein YP_003473596.1 KEGG: pin:Ping_1133 lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_003473598.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: tbd:Tbd_0572 DMSO reductase chain C YP_003473599.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vap:Vapar_3814 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003473600.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide- binding region; KEGG: tbd:Tbd_0570 DMSO reductase chain A YP_003473601.1 KEGG: hpa:HPAG1_0201 transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS891/IS1136/IS1341 family YP_003473602.1 KEGG: pca:Pcar_0256 molybdopterin biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain YP_003473603.1 TIGRFAM: homoaconitate hydratase family protein; 3- isopropylmalate dehydratase, large subunit; 3- isopropylmalate dehydratase; KEGG: sfu:Sfum_3029 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003473604.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: gsu:GSU1809 cell division protein FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5 YP_003473605.1 KEGG: dol:Dole_0068 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_003473606.1 PFAM: ferredoxin; KEGG: wsu:WS1382 hypothetical protein YP_003473608.1 KEGG: gem:GM21_2165 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase YP_003473609.1 KEGG: lip:LI1098 cell division protein FtsI/penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003473610.1 KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003473611.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: gsu:GSU1485 ribonuclease R, PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein YP_003473612.1 KEGG: gem:GM21_0883 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase YP_003473613.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sec:SC2094 phosphomannomutase in colanic acid gene cluster; PFAM: nucleotidyl transferase; cupin; mannose-6-phosphate isomerase type II YP_003473620.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU3264 hypothetical protein YP_003473621.1 KEGG: lhk:LHK_02021 3-deoxy-D-manno-octulosonate 8- phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA YP_003473623.1 KEGG: wsu:WS2067 hypothetical protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_003473624.1 KEGG: ech:ECH_0162 integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003473625.1 KEGG: afr:AFE_2544 geranylgeranyl reductase family protein; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_003473626.1 PFAM: NIL domain; KEGG: dat:HRM2_45870 ferredoxin YP_003473627.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: dal:Dalk_0686 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003473628.1 KEGG: sat:SYN_02713 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase AAA; SMART: response regulator receiver; ATPase AAA YP_003473629.1 PFAM: protein of unknown function DUF2168; KEGG: gme:Gmet_2867 hypothetical protein YP_003473630.1 KEGG: glo:Glov_0673 phospho-N-acetylmuramoyl- pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-transf erase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003473631.1 KEGG: geo:Geob_0952 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003473632.1 KEGG: dds:Ddes_2252 hypothetical protein YP_003473633.1 PFAM: Queuosine synthesis-like; KEGG: cbc:CbuK_2130 queuosine biosynthesis protein YP_003473634.1 PFAM: Circadian clock protein KaiC central region; KEGG: nis:NIS_1761 ATPase YP_003473635.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: cps:CPS_3753 biopolymer transport ExbD protein YP_003473636.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mca:MCA0631 MotA/TolQ/ExbB proton channel family protein YP_003473637.1 KEGG: dar:Daro_2439 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003473638.1 PFAM: phosphoglycerate mutase; KEGG: afr:AFE_0621 phosphoglycerate mutase family protein YP_003473639.1 PFAM: aminotransferase class V; KEGG: nis:NIS_1627 aminotransferase YP_003473640.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gur:Gura_2208 hypothetical protein YP_003473641.1 KEGG: nam:NAMH_1138 transferase hexapeptide repeat protein YP_003473643.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: mxa:MXAN_3556 hypothetical protein YP_003473644.1 PFAM: regulatory protein TetR; KEGG: ppd:Ppro_0332 TetR family transcriptional regulator YP_003473645.1 KEGG: mca:MCA2585 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase; PFAM: glutamine amidotransferase class-I YP_003473646.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: GI15537 gene product from transcript GI15537- RA YP_003473648.1 KEGG: nam:NAMH_1144 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003473649.1 TIGRFAM: thymidylate synthase, flavin-dependent; KEGG: thyA; thymidylate synthase (FAD) ; K03465 thymidylate synthase (FAD); PFAM: thymidylate synthase complementing protein ThyX YP_003473650.1 TIGRFAM: homoserine kinase; KEGG: wsu:WS2015 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003473651.1 KEGG: fph:Fphi_1014 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003473652.1 PFAM: radical SAM protein; KEGG: dat:HRM2_33150 FbiC1 YP_003473653.1 KEGG: glo:Glov_2167 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003473654.1 TIGRFAM:2, 5-diamino-6-hydroxy-4-(5-phosphoribosylami no)pyrimidine1-reductase; KEGG: psp:PSPPH_3758 riboflavin biosynthesis protein RibD domain-containing protein; PFAM: bifunctional deaminase-reductase domain protein YP_003473655.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fph:Fphi_1114 CDP-alcohol phosphatidyltransferase family protein YP_003473656.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: gme:Gmet_1262 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003473658.1 KEGG: sfu:Sfum_1369 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003473659.1 KEGG: gme:Gmet_1598 glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003473660.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: gur:Gura_1875 3-oxoacyl-(acyl-carrier- protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003473661.1 KEGG: noc:Noc_0217 deoxyribonuclease V; PFAM: endonuclease V YP_003473662.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: nis:NIS_0196 signal transduction response regulator; SMART: EAL domain protein; GGDEF domain containing protein YP_003473664.1 PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_0666 dienelactone hydrolase YP_003473665.1 PFAM: Homing endonuclease LAGLIDADG/HNH; KEGG: cbg:CbuG_1824 homing endonuclease YP_003473667.1 KEGG: ppd:Ppro_2969 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003473668.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_1388 major facilitator superfamily MFS_1 YP_003473670.1 SMART: ATPase AAA; TIGRFAM: DNA polymerase III subunits gamma and tau; KEGG: sfu:Sfum_2789 DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA YP_003473671.1 KEGG: gme:Gmet_1578 polyA polymerase family protein; PFAM: polynucleotide adenylyltransferase region; phosphoesterase DHHA1; CBS domain containing protein; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein YP_003473672.1 KEGG: sfu:Sfum_2058 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003473673.1 KEGG: mxa:MXAN_4908 protein methyltransferase HemK; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003473674.1 KEGG: dol:Dole_2054 hypothetical protein; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein YP_003473675.1 PFAM: integral membrane protein TerC; KEGG: gsu:GSU0855 TerC family membrane protein YP_003473676.1 TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; KEGG: sbo:SBO_2452 hypothetical protein; PFAM: Bifunctional glucose-6-phosphate/mannose-6- phosphate isomerase-like; sugar isomerase (SIS) YP_003473677.1 KEGG: dma:DMR_21330 hypothetical protein YP_003473678.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: gur:Gura_4031 Mg chelatase, subunit ChlI; SMART: ATPase AAA YP_003473679.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gme:Gmet_1946 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003473680.1 PFAM: protein of unknown function DUF474; KEGG: dia:Dtpsy_2513 hypothetical protein YP_003473681.1 KEGG: gur:Gura_4426 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003473682.1 PFAM: electron transporter SCO1/SenC; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: tmz:Tmz1t_1061 electron transporter SCO1/SenC YP_003473683.1 KEGG: ank:AnaeK_2246 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; GTP- binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein YP_003473684.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: phosphoribosylaminoimidazole carboxylase ; K11808 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003473685.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: gur:Gura_2242 biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM protein YP_003473686.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: sun:SUN_0966 lipoate protein ligase YP_003473688.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; chorismate mutase; KEGG: glo:Glov_2150 chorismate mutase YP_003473689.1 PFAM: protein of unknown function DUF58; KEGG: geo:Geob_2886 protein of unknown function DUF58 YP_003473690.1 KEGG: sat:SYN_02180 membrane protease subunit, stomatin/prohibitin -like protein; PFAM: band 7 protein; SMART: band 7 protein YP_003473692.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: noc:Noc_1038 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003473693.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: hac:Hac_0718 flagellar motor protein MotA YP_003473694.1 PFAM: OmpA/MotB domain protein; KEGG: ppd:Ppro_3470 OmpA/MotB domain-containing protein YP_003473695.1 PFAM: protein of unknown function UPF0079; KEGG: rfe:RF_0017 hypothetical protein YP_003473696.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; carbamoyl-phosphate synthetase large chain domain protein; KEGG: abu:Abu_0605 acetyl CoA carboxylase, biotin carboxylase subunit YP_003473698.1 KEGG: tgr:Tgr7_0838 hypothetical protein YP_003473699.1 PFAM: rubrerythrin; KEGG: pla:Plav_3638 rubrerythrin YP_003473700.1 KEGG: net:Neut_1953 glycine dehydrogenase subunit 1; PFAM: glycine cleavage system P-protein-like YP_003473701.1 KEGG: hypothetical protein ; K02437 glycine cleavage system H protein; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage H-protein YP_003473703.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nis:NIS_1477 signal transduction response regulator; SMART: GGDEF domain containing protein YP_003473704.1 KEGG: pay:PAU_01523 nadh dehydrogenase I chain e (nadh-ubiquinone oxidoreductase chain 5 (nuo5); TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003473705.1 KEGG: ank:AnaeK_4331 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_003473706.1 KEGG: sat:SYN_02178 uracil DNA glycosylase superfamily protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily YP_003473707.1 TIGRFAM: arsenite-activated ATPase ArsA; KEGG: dal:Dalk_3989 arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_003473708.1 PFAM: sterol-binding domain protein; KEGG: tbd:Tbd_0976 hypothetical protein YP_003473709.1 KEGG: sun:SUN_1435 DEAD-box ATP dependent DNA helicase; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_003473710.1 PFAM: protein of unknown function DUF81; KEGG: azo:azo1160 hypothetical protein YP_003473712.1 KEGG: dma:DMR_21840 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003473713.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: vha:VIBHAR_06844 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003473714.1 KEGG: tgr:Tgr7_0087 DNA polymerase I; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_003473715.1 KEGG: nis:NIS_0609 flagellar basal-body rod protein FlgF; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003473717.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: hso:HS_0925 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_003473718.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: afw:Anae109_2007 molybdopterin oxidoreductase Fe4s4 region YP_003473719.1 TIGRFAM: formate dehydrogenase, subunit alpha; KEGG: afw:Anae109_2008 formate dehydrogenase, subunit alpha; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003473720.1 KEGG: mca:MCA1209 formate dehydrogenase, iron- sulfur subunit; TIGRFAM: formate dehydrogenase subunit beta; PFAM: formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003473721.1 TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: geo:Geob_1645 formate dehydrogenase, subunit gamma YP_003473722.1 KEGG: gem:GM21_3067 superoxide dismutase; PFAM: superoxide dismutase copper/zinc binding YP_003473723.1 PFAM: formate dehydrogenase accessory protein; KEGG: sat:SYN_00288 uncharacterized protein involved in formate dehydrogenase formation YP_003473724.1 PFAM: glycine cleavage H-protein; KEGG: afr:AFE_2869 glycine cleavage system protein H YP_003473725.1 TIGRFAM: threonyl-tRNA synthetase; KEGG: tgr:Tgr7_1450 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD YP_003473726.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: sfu:Sfum_1596 1-acyl-sn-glycerol-3-phosphate acyltransferases; SMART: phospholipid/glycerol acyltransferase YP_003473727.1 PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: abu:Abu_1218 molybdopterin-guanine dinucleotide biosynthesis protein YP_003473728.1 PFAM: glycosyl transferase family 9; KEGG: dal:Dalk_1097 glycosyl transferase family 9 YP_003473730.1 PFAM: protein of unknown function DUF458 YP_003473731.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: nis:NIS_0196 signal transduction response regulator; SMART: EAL domain protein; GGDEF domain containing protein YP_003473732.1 KEGG: sat:SYN_00761 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_003473733.1 TIGRFAM: ferrochelatase; KEGG: gme:Gmet_0019 ferrochelatase; PFAM: ferrochelatase YP_003473734.1 KEGG: pca:Pcar_2150 shikimate 5-dehydrogenase-like oxidoreductase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase YP_003473735.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: NIFU3; iron-sulfur cluster assembly protein YP_003473737.1 PFAM: SirA family protein; KEGG: ade:Adeh_4046 SirA-like YP_003473738.1 PFAM: tRNA methyl transferase-like; thiamine biosynthesis protein-like; KEGG: ade:Adeh_4045 thiamine biosynthesis protein YP_003473739.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: afr:AFE_1508 nitrogen fixation protein NifU YP_003473740.1 KEGG: azo:azo1898 (3R)-hydroxymyristol acyl carrier protein dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; thioesterase YP_003473741.1 KEGG: cps:CPS_4815 hypothetical protein YP_003473742.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gur:Gura_2050 binding-protein-dependent transport systems inner membrane component YP_003473743.1 KEGG: ppd:Ppro_2119 metal dependent phosphohydrolase; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein YP_003473744.1 KEGG: wsu:WS0017 hypothetical protein; PFAM: protein of unknown function Met10; SMART: PUA domain containing protein YP_003473745.1 TIGRFAM: undecaprenol kinase; KEGG: wsu:WS1290 undecaprenol kinase bacitracin resistance protein; PFAM: bacitracin resistance protein BacA YP_003473746.1 KEGG: aeh:Mlg_2763 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferase class-II YP_003473747.1 KEGG: sfu:Sfum_0154 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase subunit beta; PFAM: t-RNA-binding domain protein YP_003473748.1 KEGG: dol:Dole_2356 hypothetical protein YP_003473749.1 KEGG: ppd:Ppro_2313 alpha- isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003473750.1 TIGRFAM: transaldolase; KEGG: gsu:GSU2977 translaldolase; PFAM: transaldolase YP_003473751.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: pca:Pcar_1914 membrane-associated Zn- dependent protease; SMART: PDZ/DHR/GLGF domain protein YP_003473752.1 PFAM: protein of unknown function UPF0047; KEGG: sfu:Sfum_1967 hypothetical protein YP_003473753.1 PFAM: 4-vinyl reductase 4VR; KEGG: dal:Dalk_3884 sigma54 specific Fis family transcriptional regulator YP_003473754.1 PFAM: protein of unknown function DUF59; KEGG: abu:Abu_0606 hypothetical protein YP_003473755.1 KEGG: sat:SYN_01125 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD YP_003473756.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: nad-dependent epimerase/dehydratase YP_003473757.1 PFAM: peptidase M24; creatinase; KEGG: gsu:GSU2021 xaa-pro dipeptidase YP_003473758.1 PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; regulatory protein LacI; KEGG: hps:HPSH_03295 RNA polymerase factor sigma-54 YP_003473759.1 KEGG: dol:Dole_2054 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_003473760.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: sat:SYN_02172 oligopeptide transport ATP- binding protein; SMART: ATPase AAA YP_003473761.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: nis:NIS_0364 coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM domain protein YP_003473762.1 KEGG: sfu:Sfum_3277 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003473763.1 KEGG: geo:Geob_1247 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase YP_003473764.1 KEGG: geo:Geob_0420 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase YP_003473765.1 PFAM: protein of unknown function DUF101; KEGG: afw:Anae109_0987 hypothetical protein YP_003473766.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: mxa:MXAN_5927 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003473768.1 KEGG: nis:NIS_0596 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003473769.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: dvl:Dvul_2453 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; phosphoribosylglycinamide synthetase, N- domain; phosphoribosylglycinamide synthetase, C-domain YP_003473770.1 PFAM: protein of unknown function UPF0118; KEGG: sat:SYN_00207 permease YP_003473771.1 KEGG: glo:Glov_1867 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003473772.1 TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; KEGG: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003473773.1 PFAM: conserved hypothetical protein; KEGG: gsu:GSU2648 hypothetical protein YP_003473774.1 PFAM: ResB family protein; KEGG: gsu:GSU0613 ResB-like family protein YP_003473776.1 TIGRFAM: peptide deformylase; KEGG: ade:Adeh_0725 peptide deformylase; PFAM: formylmethionine deformylase YP_003473777.1 KEGG: mxa:MXAN_5579 lysyl-tRNA synthetase- related protein GenX; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S) YP_003473778.1 KEGG: afr:AFE_0231 dolichyl-phosphate-mannose- protein mannosyltransferase family protein YP_003473780.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: gur:Gura_1578 aldehyde dehydrogenase YP_003473781.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gsu:GSU1322 cytochrome C biogenesis protein CcdA YP_003473782.1 KEGG: gem:GM21_3797 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase YP_003473783.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: geo:Geob_2402 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003473784.1 KEGG: pca:Pcar_1907 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003473785.1 KEGG: geo:Geob_2508 selenide, water dikinase; TIGRFAM: selenide, water dikinase; manually curated; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003473786.1 KEGG: scl:sce0062 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003473787.1 PFAM: carbon starvation protein CstA; KEGG: mpt:Mpe_A1025 carbon starvation A transmembrane protein YP_003473788.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: pmu:PM0342 ribonuclease G; PFAM: RNA-binding protein AU-1/ribonuclease E/G; RNA binding S1 domain protein YP_003473789.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: pca:Pcar_2383 TPR domain-containing protein YP_003473790.1 KEGG: sdn:Sden_0857 iojap-related protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003473791.1 KEGG: afw:Anae109_3372 hypothetical protein YP_003473792.1 KEGG: geo:Geob_0373 GTPase-like protein YP_003473794.1 KEGG: gem:GM21_1334 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; anticodon- binding domain protein YP_003473795.1 KEGG: gur:Gura_3690 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003473797.1 KEGG: gsu:GSU2045 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003473798.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: scl:sce4468 twitching motility protein; SMART: ATPase AAA YP_003473799.1 PFAM: type II secretion system F domain; KEGG: tgr:Tgr7_0786 type IV pilin biogenesis protein PilC YP_003473800.1 KEGG: spl:Spea_2024 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003473801.1 KEGG: ccv:CCV52592_1889 hydrogenase nickel insertion protein HypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_003473802.1 KEGG: hhe:HH0324 hydrogenase isoenzyme formation protein HypC; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_003473803.1 KEGG: lch:Lcho_2448 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_003473804.1 PFAM: formyl transferase; enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_1541 formyl transferase-like protein YP_003473805.1 PFAM: regulatory protein TetR; KEGG: nam:NAMH_0571 TetR family transcriptional regulator YP_003473806.1 KEGG: tdn:Suden_0064 ABC transporter-related protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003473807.1 KEGG: nam:NAMH_0735 hypothetical protein YP_003473808.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: aeh:Mlg_2033 cobalamin (vitamin B12) biosynthesis CbiM protein YP_003473809.1 KEGG: tdn:Suden_0061 hypothetical protein YP_003473810.1 KEGG: tdn:Suden_0060 hypothetical protein YP_003473811.1 PFAM: nickel transport complex, NikM subunit, transmembrane; KEGG: tdn:Suden_0059 hypothetical protein YP_003473812.1 PFAM: protein of unknown function DUF43; KEGG: aav:Aave_3741 hypothetical protein YP_003473813.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gsu:GSU1371 oxidoreductase, FAD/FMN-binding YP_003473814.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: glo:Glov_3161 recombinase A; SMART: ATPase AAA YP_003473817.1 PFAM: SirA family protein; KEGG: noc:Noc_2653 SirA-like protein YP_003473818.1 KEGG: pca:Pcar_0733 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase YP_003473820.1 KEGG: gem:GM21_1883 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003473821.1 PFAM: inositol monophosphatase; KEGG: lch:Lcho_1218 inositol-phosphate phosphatase YP_003473822.1 PFAM: UspA domain protein; KEGG: lpc:LPC_2094 hypothetical protein YP_003473823.1 KEGG: sfu:Sfum_0074 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide repeat YP_003473824.1 PFAM: permease YjgP/YjgQ family protein; KEGG: glo:Glov_2589 permease YjgP/YjgQ family protein YP_003473825.1 KEGG: cvi:CV_3609 hypothetical protein YP_003473826.1 KEGG: gur:Gura_0990 hypothetical protein YP_003473827.1 KEGG: ank:AnaeK_3565 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_003473828.1 TIGRFAM: glutaredoxin-like domain protein; KEGG: acp:A2cp1_2897 glutaredoxin-like domain protein YP_003473829.1 KEGG: glo:Glov_2012 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein YP_003473830.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: sfu:Sfum_2644 lipoyl synthase; PFAM: radical SAM domain protein YP_003473831.1 PFAM: protein of unknown function DUF77; KEGG: mpt:Mpe_A3164 hypothetical protein YP_003473832.1 PFAM: peptidase S16; KEGG: geo:Geob_1956 peptidase S16 YP_003473833.1 KEGG: mxa:MXAN_4771 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase YP_003473834.1 PFAM: cytochrome C class I; KEGG: pag:PLES_05151 cytochrome C-551 precursor YP_003473835.1 KEGG: dat:HRM2_08800 GltA2; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003473837.1 PFAM: glycosyl transferase family 9; KEGG: pna:Pnap_0149 lipopolysaccharide heptosyltransferase II YP_003473838.1 PFAM: cell cycle protein; KEGG: lip:LI1103 cell division membrane protein YP_003473839.1 KEGG: sfu:Sfum_0122 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003473840.1 KEGG: nam:NAMH_1454 hypothetical protein YP_003473841.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: hha:Hhal_1044 CbbQ/NirQ/NorQ C-terminal domain-containing protein YP_003473843.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gbm:Gbem_0351 6-phosphogluconate dehydrogenase NAD-binding YP_003473844.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: gur:Gura_1935 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_003473845.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: abm:ABSDF1284 O-sialoglycoprotein endopeptidase gcp; PFAM: peptidase M22 glycoprotease YP_003473846.1 PFAM: ABC transporter; KEGG: sun:SUN_0760 metal ion ABC transporter permease YP_003473847.1 PFAM: periplasmic solute binding protein; KEGG: nis:NIS_0024 metal ion ABC transporter substrate-binding protein YP_003473848.1 KEGG: sun:SUN_0762 hypothetical protein YP_003473850.1 PFAM: rhomboid family protein; KEGG: ppd:Ppro_0568 rhomboid family protein YP_003473851.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: afw:Anae109_2774 alcohol dehydrogenase YP_003473852.1 PFAM: protein of unknown function DUF411; KEGG: psa:PST_2714 metal-binding protein YP_003473853.1 PFAM: Domain of unknown function DUF1791; KEGG: tbd:Tbd_1843 hypothetical protein YP_003473854.1 KEGG: nis:NIS_0837 fumarate/tartrate hydratase, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region YP_003473855.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_3218 glutaredoxin YP_003473856.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: tgr:Tgr7_2206 biotin/lipoate A/B protein ligase YP_003473857.1 KEGG: sat:SYN_02812 flagellar hook-associated protein 1; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellin hook IN repeat protein YP_003473858.1 TIGRFAM: flagellar hook-associated protein 3; KEGG: nis:NIS_0644 flagellar hook-associated protein 3 FliC YP_003473859.1 KEGG: scl:sce9025 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70 YP_003473860.1 KEGG: lch:Lcho_4258 PilT domain-containing protein YP_003473861.1 KEGG: mxa:MXAN_5204 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein YP_003473862.1 PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A1897 phosphoribosyl transferase protein YP_003473863.1 PFAM: HupH hydrogenase expression protein; KEGG: avn:Avin_50530 hydrogenase expression/formation protein HoxQ YP_003473864.1 PFAM: hydrogenase-1 expression HyaE; KEGG: reh:PHG007 HoxO YP_003473865.1 KEGG: gme:Gmet_3329 peptidase M52, hydrogenase maturation peptidase; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_003473866.1 KEGG: mpt:Mpe_A2824 HupC protein; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561 YP_003473867.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: azo:azo3787 ferredoxin hydrogenase, large chain YP_003473868.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: avn:Avin_50590 uptake hydrogenase small subunit (precursor), HoxK; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003473869.1 KEGG: geo:Geob_1720 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003473870.1 KEGG: mxa:MXAN_2340 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; nitrite and sulphite reductase 4Fe-4S region; thiamineS protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein YP_003473872.1 PFAM: protein of unknown function DUF81; KEGG: ppg:PputGB1_1875 hypothetical protein YP_003473873.1 KEGG: nis:NIS_1790 uroporphyrin-III C- methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003473874.1 TIGRFAM: sulfate adenylyltransferase; KEGG: scl:sce0740 sulfate adenylyltransferase; PFAM: ATP-sulfurylase YP_003473875.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: abu:Abu_2292 molybdopterin biosynthesis protein YP_003473876.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: ank:AnaeK_2367 pyridoxine 5'-phosphate synthase; PFAM: pyridoxal phosphate biosynthetic protein PdxJ YP_003473877.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: geo:Geob_1116 twitching motility protein; SMART: ATPase AAA YP_003473878.1 PFAM: protein of unknown function DUF554; KEGG: sfu:Sfum_1389 hypothetical protein YP_003473880.1 KEGG: gur:Gura_1463 prephenate dehydrogenase; PFAM: prephenate dehydrogenase YP_003473881.1 KEGG: gsu:GSU1272 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase; PFAM: amidohydrolase YP_003473882.1 KEGG: nam:NAMH_0349 hypothetical protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003473883.1 TIGRFAM: conserved hypothetical protein; PFAM: radical SAM domain protein; KEGG: dat:HRM2_32150 predicted Fe-S oxidoreductase; SMART: Elongator protein 3/MiaB/NifB YP_003473884.1 KEGG: afw:Anae109_0310 hypothetical protein YP_003473885.1 PFAM: protein of unknown function DUF86 YP_003473886.1 KEGG: gsu:GSU3051 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003473887.1 PFAM: flagellar basal body-associated protein FliL; KEGG: nis:NIS_0629 flagellar basal body-associated protein FliL YP_003473889.1 KEGG: pla:Plav_2568 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003473890.1 KEGG: cvi:CV_3125 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003473891.1 KEGG: csa:Csal_1967 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003473892.1 KEGG: nis:NIS_0635 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003473893.1 KEGG: sun:SUN_1449 hypothetical protein YP_003473894.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bph:Bphy_6480 transcriptional coactivator/pterin dehydratase YP_003473895.1 PFAM: ferric-uptake regulator; KEGG: sfu:Sfum_1722 ferric uptake regulator family protein YP_003473896.1 TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; KEGG: geo:Geob_1848 tRNA 2-selenouridine synthase; SMART: rhodanese YP_003473897.1 PFAM: radical SAM protein; KEGG: gur:Gura_2282 radical SAM domain-containing protein YP_003473899.1 TIGRFAM: small GTP-binding protein; KEGG: mxa:MXAN_1925 gliding motility protein MglA YP_003473900.1 KEGG: dal:Dalk_2486 roadblock/LC7 family protein YP_003473901.1 PFAM: nucleic acid binding OB-fold tRNA/helicase- type; KEGG: smt:Smal_1848 secreted protein YP_003473902.1 KEGG: sat:SYN_02914 hypothetical protein YP_003473903.1 KEGG: sat:SYN_02914 hypothetical protein YP_003473904.1 PFAM: nucleic acid binding OB-fold tRNA/helicase- type; KEGG: smt:Smal_1848 secreted protein YP_003473906.1 KEGG: ppd:Ppro_0168 hypothetical protein YP_003473907.1 KEGG: bba:Bd3318 RNA polymerase sigma factor for flagellar operon; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2 YP_003473908.1 SMART: ATPase AAA; KEGG: dno:DNO_0776 DNA replication protein DnaC YP_003473909.1 KEGG: ppd:Ppro_0789 hypothetical protein YP_003473910.1 KEGG: mca:MCA1905 hypothetical protein YP_003473911.1 KEGG: cha:CHAB381_0226 hypothetical protein YP_003473912.1 PFAM: FMN-binding domain protein; KEGG: acp:A2cp1_2383 FMN-binding domain protein YP_003473913.1 KEGG: noc:Noc_2933 hypothetical protein YP_003473914.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; KEGG: nis:NIS_0212 DNA primase DnaG; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003473915.1 KEGG: cbc:CbuK_1468 succinyl-CoA synthetase alpha chain; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA- binding domain protein YP_003473916.1 KEGG: gsu:GSU3449 ferredoxin family protein YP_003473918.1 PFAM: beta-lactamase; KEGG: ade:Adeh_0750 beta-lactamase-like YP_003473919.1 PFAM: SNARE associated Golgi protein; KEGG: pca:Pcar_1428 hypothetical protein YP_003473920.1 PFAM: peptidase M23; KEGG: lip:LI0920 membrane proteins related to metalloendopeptidases YP_003473921.1 PFAM: protein of unknown function DUF507; KEGG: hps:HPSH_06395 hypothetical protein YP_003473922.1 PFAM: methyltransferase small; KEGG: gbm:Gbem_3437 methyltransferase small YP_003473923.1 KEGG: nis:NIS_1219 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon- like YP_003473924.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: gme:Gmet_0309 succinate dehydrogenase subunit B; PFAM: ferredoxin YP_003473925.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: pca:Pcar_1160 flagellar biosynthesis protein FlhG YP_003473926.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: gur:Gura_4110 GTP-binding signal recognition particle; SMART: ATPase AAA YP_003473927.1 KEGG: nis:NIS_0615 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003473928.1 PFAM: protein of unknown function DUF150; KEGG: pca:Pcar_1552 hypothetical protein YP_003473929.1 KEGG: gem:GM21_2983 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; K Homology, type 1, subgroup YP_003473930.1 TIGRFAM: RNA methyltransferase, TrmA family; KEGG: dps:DP1443 RNA-methyltransferase; PFAM: (uracil-5)-methyltransferase YP_003473931.1 PFAM: type IV pilus assembly PilZ YP_003473932.1 PFAM: protein of unknown function DUF214; KEGG: dds:Ddes_0613 lipoprotein releasing system, transmembrane protein, LolC/E family YP_003473933.1 KEGG: prw:PsycPRwf_1739 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003473934.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: pca:Pcar_1972 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003473935.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: geo:Geob_2145 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain YP_003473936.1 PFAM: polysaccharide deacetylase; KEGG: dde:Dde_1658 polysaccharide deacetylase family protein YP_003473937.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; KEGG: tdn:Suden_0469 HAD family hydrolase YP_003473938.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: septum formation topological specificity factor MinE; KEGG: bpa:BPP3581 cell division topological specificity factor MinE YP_003473939.1 KEGG: nam:NAMH_1151 septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase YP_003473940.1 KEGG: sfu:Sfum_1280 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: septum formation inhibitor MinC YP_003473941.1 KEGG: wsu:WS0679 glycero-mannoheptose-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase YP_003473942.1 KEGG: cla:Cla_0550 60 kDa inner-membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein YP_003473943.1 PFAM: protein of unknown function DUF37; KEGG: dal:Dalk_4134 protein of unknown function DUF37 YP_003473944.1 KEGG: xfn:XfasM23_2226 ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_003473945.1 KEGG: abu:Abu_1748 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003473946.1 KEGG: dvl:Dvul_2066 ATP synthase F0 subunit alpha; TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha YP_003473947.1 PFAM: nitrogen-fixing NifU domain protein; protein of unknown function DUF59; KEGG: sat:SYN_02452 NifU-like domain-containing protein YP_003473948.1 KEGG: vvy:VV2787 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003473949.1 KEGG: GCSL; dihydrolipoyl dehydrogenase ; K00382 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase YP_003473951.1 KEGG: scl:sce0071 hypothetical protein; PFAM: Manganese/iron superoxide dismutase-like YP_003473952.1 PFAM: protein of unknown function DUF461; KEGG: pin:Ping_3432 hypothetical protein YP_003473953.1 KEGG: mxa:MXAN_6341 glycine cleavage system T protein; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003473954.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sun:SUN_1508 hypothetical protein YP_003473955.1 PFAM: protein of unknown function DUF72; KEGG: apa:APP7_1262 hypothetical protein YP_003473956.1 TIGRFAM: ATP synthase F1 subunit alpha; KEGG: nis:NIS_1222 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; HerA-ATP synthase, barrel domain; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003473957.1 PFAM: copper resistance B precursor; KEGG: rpi:Rpic_1839 copper resistance B precursor YP_003473958.1 KEGG: net:Neut_0311 copper-resistance protein, CopA family protein; TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2 YP_003473960.1 KEGG: afw:Anae109_3997 HhH-GPD family protein; SMART: HhH-GPD family protein YP_003473961.1 PFAM: SMC domain protein; KEGG: gur:Gura_1707 DNA repair protein RecN YP_003473962.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: gsu:GSU2195 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; 2-nitropropane dioxygenase NPD YP_003473963.1 TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; KEGG: gme:Gmet_0412 undecaprenyldiphospho- muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003473964.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_3347 NADH-quinone oxidoreductase, chain I YP_003473965.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: las:CLIBASIA_03785 NADH dehydrogenase subunit J YP_003473966.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: hpb:HELPY_1246 NADH-ubiquinone oxidoreductase, NQO11 subunit YP_003473967.1 KEGG: aeh:Mlg_1959 proton-translocating NADH- quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003473968.1 KEGG: sme:SMa1536 NuoM2 NADH- ubiquinone/plastoquinone (complex I) oxidoreductase; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003473969.1 KEGG: tcx:Tcr_0830 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003473970.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: vei:Veis_2813 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_003473971.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: geo:Geob_0465 NADH dehydrogenase I, D subunit YP_003473972.1 KEGG: sme:SMa1516 NuoH2 NADH:ubiquinone oxidoreductase subunit 1 (chain H); PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003473973.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: predicted protein; K03941 NADH dehydrogenase (ubiquinone) Fe-S protein 8 YP_003473974.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: dze:Dd1591_1402 NADH dehydrogenase (quinone) YP_003473975.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dds:Ddes_1658 NADH-ubiquinone oxidoreductase chain 4L YP_003473976.1 KEGG: aeh:Mlg_1959 proton-translocating NADH- quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003473977.1 KEGG: gsu:GSU0350 NADH dehydrogenase I, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003473978.1 KEGG: gme:Gmet_3342 proton-translocating NADH- quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003473979.1 PFAM: beta-lactamase; KEGG: glo:Glov_3342 beta-lactamase YP_003473981.1 KEGG: mca:MCA0348 glycine dehydrogenase subunit 2; PFAM: glycine cleavage system P-protein-like; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003473982.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III subunit beta; KEGG: pca:Pcar_0002 DNA polymerase III beta subunit; PFAM: DNA polymerase III beta chain YP_003473983.1 TIGRFAM: thymidylate kinase; KEGG: gur:Gura_3153 dTMP kinase; PFAM: thymidylate kinase YP_003473984.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: gsu:GSU3325 excinuclease ABC subunit A; SMART: AAA ATPase YP_003473985.1 KEGG: dal:Dalk_0740 nuclease (SNase domain protein); PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein) YP_003473986.1 KEGG: sfu:Sfum_2676 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase YP_003473987.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: nis:NIS_1651 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein YP_003473988.1 TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; KEGG: ccv:CCV52592_2005 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003473989.1 TIGRFAM: alpha-glucan phosphorylase; KEGG: pca:Pcar_1731 glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003473990.1 KEGG: sat:SYN_00324 cytoplasmic protein YP_003473991.1 PFAM: sugar isomerase (SIS); KEGG: mfa:Mfla_0770 phosphoheptose isomerase YP_003473992.1 KEGG: mfa:Mfla_0774 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase YP_003473993.1 PFAM: protein of unknown function DUF815; KEGG: gme:Gmet_1239 hypothetical protein YP_003473994.1 KEGG: afr:AFE_0365 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003473995.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvm:DvMF_0108 LysR family transcriptional regulator YP_003473996.1 PFAM: glycosyl transferase family 2; KEGG: glo:Glov_2754 glycosyl transferase family 2 YP_003473997.1 KEGG: abu:Abu_2282 hypothetical protein YP_003473998.1 PFAM: protein of unknown function DUF52; KEGG: sfu:Sfum_0075 hypothetical protein YP_003473999.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bgl:bglu_2p1060 major facilitator superfamily MFS_1 YP_003474000.1 PFAM: class II aldolase/adducin family protein; KEGG: sun:SUN_0631 hypothetical protein YP_003474001.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: geo:Geob_1889 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_003474002.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: mxa:MXAN_1048 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003474003.1 PFAM: flagellar P-ring protein; KEGG: dvl:Dvul_2425 flagellar basal body P-ring protein YP_003474004.1 PFAM: flagellar L-ring protein; KEGG: gem:GM21_3844 flagellar L-ring protein YP_003474005.1 KEGG: hypothetical protein; PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease YP_003474006.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1708 acetyltransferase YP_003474007.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; KEGG: geo:Geob_2178 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB YP_003474008.1 PFAM: protein of unknown function DUF151; KEGG: sfu:Sfum_0418 hypothetical protein YP_003474010.1 PFAM: peptidase M50; KEGG: afr:AFE_1788 membrane-associated zinc metalloprotease YP_003474011.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: nis:NIS_0005 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003474012.1 PFAM: amidohydrolase; amidohydrolase; KEGG: aeh:Mlg_0911 N-ethylammeline chlorohydrolase YP_003474014.1 PFAM: type II secretion system protein E; KEGG: mxa:MXAN_2513 general secretory pathway protein E YP_003474016.1 KEGG: hha:Hhal_2370 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_003474017.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: geo:Geob_0897 type II secretory pathway component PulC-like protein YP_003474018.1 PFAM: type II secretion system F domain; KEGG: dat:HRM2_11250 GspF1 YP_003474019.1 PFAM: thiamineS protein; KEGG: afw:Anae109_1160 molybdopterin converting factor, subunit 1 YP_003474020.1 PFAM: glycosyl transferase family 9; KEGG: afw:Anae109_2581 lipopolysaccharide heptosyltransferase II YP_003474022.1 KEGG: dps:DP0570 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase- type YP_003474023.1 TIGRFAM: seryl-tRNA synthetase; KEGG: gme:Gmet_3528 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like YP_003474024.1 TIGRFAM: pantoate/beta-alanine ligase; KEGG: rlg:Rleg_4723 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003474025.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: scl:sce7268 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003474026.1 KEGG: nam:NAMH_1802 transcription antitermination factor NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003474027.1 KEGG: abu:Abu_2127 twin arginine-targeting protein translocase; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003474028.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: gme:Gmet_1431 NAD-dependent epimerase/dehydratase YP_003474029.1 KEGG: dvl:Dvul_1290 ATPase; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA YP_003474030.1 KEGG: gem:GM21_0506 UDP-N-acetylmuramoylalanine/D- glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003474031.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: gur:Gura_0184 NAD-dependent epimerase/dehydratase YP_003474032.1 PFAM: glycosyl transferase family 2; KEGG: pnu:Pnuc_0609 glycosyl transferase YP_003474033.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: nis:NIS_0611 flagellar protein FlgA YP_003474035.1 PFAM: protein of unknown function DUF202; KEGG: afr:AFE_1554 hypothetical protein YP_003474036.1 KEGG: gur:Gura_3296 hypothetical protein YP_003474037.1 KEGG: csa:Csal_2836 protein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003474038.1 PFAM: MgtC/SapB transporter; KEGG: pca:Pcar_1965 MgtC family protein YP_003474039.1 TIGRFAM: protoporphyrinogen oxidase; KEGG: gme:Gmet_3551 protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003474040.1 PFAM: thiazole biosynthesis protein; KEGG: pla:Plav_3288 thiazole synthase YP_003474041.1 KEGG: mca:MCA1077 bifunctional sulfur carrier protein/thiazole synthase protein; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003474042.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: sfu:Sfum_0214 peptidase A24A domain- containing protein YP_003474043.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: hpp:HPP12_1365 type III R-M system methyltransferase YP_003474044.1 PFAM: type III restriction protein res subunit; KEGG: hpb:HELPY_1358 type III restriction enzyme R protein YP_003474045.1 TIGRFAM: diaminopimelate epimerase; KEGG: sat:SYN_00169 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003474046.1 SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; TIGRFAM: diguanylate cyclase; KEGG: dar:Daro_3508 diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_003474047.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dal:Dalk_2354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003474048.1 KEGG: afw:Anae109_4496 ATP synthase F1 gamma subunit; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma YP_003474049.1 SMART: ATPase AAA; TIGRFAM: ATP synthase F1 beta subunit; KEGG: geo:Geob_0447 ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003474050.1 TIGRFAM: ribonuclease PH; KEGG: gsu:GSU1795 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003474051.1 PFAM: protein of unknown function DUF190; KEGG: gem:GM21_0715 protein of unknown function DUF190 YP_003474052.1 KEGG: hch:HCH_02448 hypothetical protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003474053.1 PFAM: protein of unknown function DUF190; KEGG: noc:Noc_2284 hypothetical protein YP_003474055.1 KEGG: bpy:Bphyt_4040 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003474056.1 PFAM: ATP-binding region ATPase domain protein; KEGG: vha:VIBHAR_04993 histidine kinase YP_003474057.1 KEGG: bas:BUsg567 hypothetical protein YP_003474058.1 PFAM: outer membrane efflux protein; KEGG: ppw:PputW619_0062 outer membrane efflux protein YP_003474059.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: dar:Daro_0295 secretion protein HlyD YP_003474060.1 PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA YP_003474062.1 KEGG: pla:Plav_0399 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003474063.1 KEGG: tau:Tola_1848 oxaloacetate decarboxylase alpha subunit; TIGRFAM: oxaloacetate decarboxylase subunit alpha; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain- containing protein YP_003474064.1 KEGG: dal:Dalk_1559 apolipoprotein N- acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003474065.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE2965 hypothetical protein YP_003474066.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: nis:NIS_1148 exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003474067.1 KEGG: gme:Gmet_0355 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003474068.1 PFAM: protein of unknown function DUF558; KEGG: vha:VIBHAR_03572 hypothetical protein YP_003474069.1 PFAM: nitrogen regulatory protein P-II; KEGG: cvi:CV_2045 nitrogen regulatory protein P-II- 1 YP_003474070.1 KEGG: sfu:Sfum_0576 glutamine synthetase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp YP_003474071.1 KEGG: dol:Dole_0565 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003474072.1 KEGG: afe:Lferr_0203 hypothetical protein YP_003474073.1 KEGG: nis:NIS_1049 HAD family hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase YP_003474074.1 KEGG: nis:NIS_1790 uroporphyrin-III C- methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003474075.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: aeh:Mlg_1707 uroporphyrinogen III synthase HEM4 YP_003474076.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: cvi:CV_2229 nitrate reductase YP_003474077.1 TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter; KEGG: tau:Tola_1770 nitrate ABC transporter ATPases C and D; SMART: ATPase AAA YP_003474078.1 KEGG: lch:Lcho_3842 nitrate ABC transporter inner membrane subunit; TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003474079.1 KEGG: mfa:Mfla_0327 nitrate transporter periplasmic component YP_003474080.1 KEGG: ppf:Pput_3239 cyanate hydratase YP_003474081.1 PFAM: nitrogen regulatory protein P-II; KEGG: sfu:Sfum_1018 nitrogen regulatory protein P- II YP_003474082.1 PFAM: nitrogen regulatory protein P-II; KEGG: pne:Pnec_1663 nitrogen regulatory protein P- II YP_003474083.1 PFAM: globin; KEGG: plu:plu3292 nitric oxide dioxygenase YP_003474084.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: nis:NIS_1436 ferredoxin--nitrite reductase YP_003474085.1 PFAM: glutamine amidotransferase class-I; KEGG: aci:ACIAD2019 glutamine amidotransferase YP_003474086.1 PFAM: protein of unknown function DUF752; KEGG: nis:NIS_1599 hypothetical protein YP_003474087.1 PFAM: Anion-transporting ATPase; KEGG: wsu:WS1546 arsenical pump-driving ATPase YP_003474088.1 KEGG: ilo:IL0698 hypothetical protein YP_003474089.1 PFAM: cytochrome C class I; KEGG: lhk:LHK_00036 cytochrome c, class I precursor YP_003474090.1 TIGRFAM: glutamate racemase; KEGG: gsu:GSU2923 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003474091.1 KEGG: RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein YP_003474092.1 KEGG: cbc:CbuK_0604 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003474093.1 KEGG: dma:DMR_21400 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein YP_003474095.1 PFAM: protein of unknown function DUF2203; KEGG: mxa:MXAN_7051 hypothetical protein YP_003474096.1 KEGG: tgr:Tgr7_2207 radical SAM protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003474097.1 PFAM: glycine cleavage H-protein; KEGG: tgr:Tgr7_2208 glycine cleavage H-protein YP_003474098.1 KEGG: tgr:Tgr7_2209 hypothetical protein YP_003474099.1 KEGG: tgr:Tgr7_3133 hypothetical protein YP_003474100.1 PFAM: glycine cleavage H-protein; KEGG: afr:AFE_2869 glycine cleavage system protein H YP_003474101.1 KEGG: tgr:Tgr7_2211 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine- rich region domain protein YP_003474102.1 KEGG: tgr:Tgr7_2212 heterodisulfide reductase subunit C YP_003474103.1 KEGG: afr:AFE_2552 hypothetical protein YP_003474104.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afr:AFE_2553 pyridine nucleotide-disulfide oxidoreductase YP_003474105.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: afr:AFE_2554 heterodisulfide reductase subunit B, homolog YP_003474106.1 KEGG: tgr:Tgr7_2216 hypothetical protein YP_003474107.1 KEGG: afr:AFE_0363 hypothetical protein YP_003474108.1 KEGG: tbd:Tbd_0575 hypothetical protein YP_003474109.1 PFAM: SirA family protein; KEGG: vok:COSY_0219 hypothetical protein YP_003474110.1 KEGG: sun:SUN_1512 acetoin utilization protein; PFAM: histone deacetylase superfamily YP_003474112.1 KEGG: afr:AFE_2340 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003474113.1 PFAM: type IV pilus assembly PilZ; KEGG: nis:NIS_0639 hypothetical protein YP_003474114.1 KEGG: dal:Dalk_2405 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein YP_003474115.1 KEGG: rhi:NGR_c33820 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain YP_003474116.1 KEGG: mca:MCA2535 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003474117.1 TIGRFAM: glutamyl-tRNA reductase; KEGG: gsu:GSU3284 glutamyl-tRNA reductase; PFAM: shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003474118.1 PFAM: transcription regulator, AsnC-type-like; KEGG: bmi:BMEA_B0607 hypothetical protein YP_003474120.1 TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; KEGG: rme:Rmet_3250 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003474121.1 PFAM: heat shock protein Hsp20; CS; KEGG: glo:Glov_2790 heat shock protein HSP20 YP_003474122.1 KEGG: nmu:Nmul_A0906 isochorismatase hydrolase; PFAM: isochorismatase hydrolase YP_003474123.1 KEGG: gur:Gura_2152 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003474124.1 PFAM: homoserine dehydrogenase NAD-binding; KEGG: tcx:Tcr_0396 homoserine dehydrogenase, NAD- binding YP_003474125.1 KEGG: tgr:Tgr7_1461 peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: class I peptide chain release factor; PCRF domain protein YP_003474127.1 PFAM: protein of unknown function DUF302; KEGG: gsu:GSU2146 hypothetical protein YP_003474128.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: gme:Gmet_1624 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003474129.1 TIGRFAM: penicillin-binding protein 2; KEGG: ppd:Ppro_2545 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003474131.1 PFAM: Rod shape-determining protein MreC; KEGG: gur:Gura_2860 rod shape-determining protein MreC YP_003474132.1 KEGG: gme:Gmet_0918 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003474133.1 KEGG: mca:MCA0256 ferredoxin 2Fe-2S YP_003474134.1 KEGG: atu:Atu1450 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003474135.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: pfo:Pfl01_4137 ADP-ribosylation/crystallin J1 YP_003474136.1 PFAM: peptidase M48 Ste24p; KEGG: glo:Glov_0554 peptidase M48 Ste24p YP_003474137.1 KEGG: scl:sce5755 hypothetical protein; TIGRFAM: MoaD family protein; PFAM: thiamineS protein YP_003474138.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dal:Dalk_4720 methyltransferase type 11 YP_003474139.1 TIGRFAM: excinuclease ABC subunit B; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; KEGG: lip:LI0241 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase YP_003474140.1 KEGG: dat:HRM2_48140 Tkt1; TIGRFAM: transketolase; PFAM: transketolase; transketolase YP_003474141.1 KEGG: mxa:MXAN_1385 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; transferase YP_003474142.1 KEGG: bmi:BMEA_B0263 transcriptional activator protein FnrA; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide- binding YP_003474143.1 KEGG: ppd:Ppro_3281 hypothetical protein YP_003474144.1 PFAM: hypothetical protein; KEGG: sat:SYN_00409 ABC-type transporter involved in resistance to organic solvents, periplasmic component YP_003474145.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: afr:AFE_0662 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003474146.1 PFAM: oxidoreductase domain protein; KEGG: hha:Hhal_1859 oxidoreductase domain- containing protein YP_003474147.1 PFAM: glycosidase PH1107-related; KEGG: sat:SYN_01903 cytoplasmic protein YP_003474149.1 KEGG: bac:BamMC406_6773 hemolysin-type calcium binding domain-containing protein YP_003474151.1 KEGG: bac:BamMC406_6773 hemolysin-type calcium binding domain-containing protein YP_003474154.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase subunit beta; KEGG: sfu:Sfum_2689 DNA gyrase subunit beta; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein YP_003474155.1 PFAM: UspA domain protein; KEGG: sse:Ssed_2562 universal stress protein YP_003474156.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dat:HRM2_30930 tetrapyrrole (corrin/porphyrin) methylase YP_003474157.1 PFAM: glycoside hydrolase family 57; KEGG: afw:Anae109_1766 glycoside hydrolase family protein YP_003474158.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: nis:NIS_0010 succinate dehydrogenase/fumarate reductase, iron-sulfur protein YP_003474159.1 PFAM: NHL repeat containing protein; KEGG: afr:AFE_0711 NHL repeat protein YP_003474160.1 PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] iron-sulphur domain; KEGG: afr:AFE_0710 iron-sulfur cluster-binding protein, Rieske family YP_003474161.1 KEGG: afr:AFE_0707 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003474163.1 KEGG: afr:AFE_0705 hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_003474164.1 KEGG: afr:AFE_0702 hydrogenase-2, large subunit; PFAM: nickel-dependent hydrogenase large subunit YP_003474165.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: afr:AFE_0701 hydrogenase-2, small subunit YP_003474166.1 PFAM: protein of unknown function DUF1641 YP_003474168.1 KEGG: nis:NIS_0974 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_003474169.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nis:NIS_0961 Ni-Fe hydrogenase, small subunit HupS YP_003474170.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: tdn:Suden_1437 nickel-dependent hydrogenase, large subunit YP_003474171.1 KEGG: wsu:WS0790 transcriptional regulatory protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein YP_003474172.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: tbd:Tbd_1375 Ni-Fe hydrogenase large chain YP_003474173.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: tgr:Tgr7_1267 protein of unknown function DUF224 cysteine-rich region domain protein YP_003474174.1 KEGG: tgr:Tgr7_1268 hypothetical protein YP_003474175.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: tbd:Tbd_1378 Ni-Fe hydrogenase, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003474176.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dps:DP1047 hydrogenase, component B-formate hydrogenlyase subunit 3 YP_003474177.1 KEGG: nis:NIS_0718 Ni-Fe hydrogenase, membrane subunit HycD/HyfD YP_003474178.1 KEGG: eba:ebA4191 hydrogenase 4 membrane component YP_003474179.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dze:Dd1591_2712 NADH/ubiquinone/plastoquinone (complex I) YP_003474180.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: bxe:Bxe_B0325 formate hydrogenlyase subunit YP_003474181.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nis:NIS_0714 Ni-Fe hydrogenase, small subunit HycG YP_003474182.1 KEGG: gsu:GSU3311 hypothetical protein YP_003474183.1 PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)- binding subunit YP_003474184.1 PFAM: polysaccharide deacetylase; KEGG: bpa:BPP1713 polysaccharide deacetylase YP_003474185.1 KEGG: hypothetical protein; PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase YP_003474186.1 PFAM: protein of unknown function DUF839; KEGG: noc:Noc_2144 hypothetical protein YP_003474188.1 KEGG: sbp:Sbal223_4514 hypothetical protein YP_003474189.1 KEGG: mfa:Mfla_1405 hypothetical protein; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_003474190.1 PFAM: glycosyl transferase group 1; KEGG: eba:ebA6934 glycosyltransferase YP_003474191.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_2602 glycosyl transferase, group 1 YP_003474192.1 KEGG: avn:Avin_17920 hypothetical protein YP_003474193.1 KEGG: sfu:Sfum_1586 trans- hexaprenyltranstransferase; PFAM: polyprenyl synthetase YP_003474195.1 PFAM: flagellar protein FliS; KEGG: gme:Gmet_0445 flagellar protein FliS YP_003474196.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: nis:NIS_0642 flagellar hook-associated protein 2 FliD YP_003474197.1 PFAM: flagellar protein FlaG protein; KEGG: nis:NIS_0641 flagellar protein FlaG YP_003474198.1 PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: nis:NIS_0640 flagellin YP_003474199.1 PFAM: ABC transporter; transporter permease protein; KEGG: sat:SYN_00956 ABC-type Mn2+/Zn2+ transporters, permease component YP_003474200.1 TIGRFAM:2-amino-4-hydroxy-6- hydroxymethyldihydropter idinepyrophosphokinase; KEGG:dihydropteroatesynthase/2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase/ dihydroneopterin aldolase; K00796 dihydropteroate synthase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003474201.1 KEGG: dma:DMR_02710 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003474202.1 PFAM: chaperonin Cpn10; KEGG: sat:SYN_00062 co-chaperonin YP_003474203.1 TIGRFAM: thioredoxin reductase; KEGG: pca:Pcar_0114 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A YP_003474204.1 KEGG: psa:PST_3670 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003474205.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: gme:Gmet_3259 ATP phosphoribosyltransferase regulatory subunit YP_003474206.1 TIGRFAM: histidinol dehydrogenase; KEGG: pca:Pcar_2688 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003474208.1 KEGG: dal:Dalk_1768 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003474209.1 KEGG: pca:Pcar_1881 signal peptide peptidase SppA, 67K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_003474210.1 PFAM: protein of unknown function DUF2495; KEGG: afr:AFE_3115 hypothetical protein YP_003474211.1 KEGG: reu:Reut_C6294 citrate synthase YP_003474212.1 KEGG: hpb:HELPY_0964 pedidyl-prolyl cis- trans ismerase D(PPIase D) (rotamase D) YP_003474214.1 KEGG: sun:SUN_2284 hypothetical protein YP_003474215.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: tmz:Tmz1t_1891 hemerythrin HHE cation binding domain protein YP_003474216.1 KEGG: pct:PC1_1172 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003474217.1 TIGRFAM: succinyl-CoA synthetase subunit beta; KEGG: nam:NAMH_1231 succinyl-CoA synthetase beta chain; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003474218.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pat:Patl_2129 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; NAD-dependent epimerase/dehydratase YP_003474219.1 KEGG: mxa:MXAN_4613 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase YP_003474220.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: cbd:CBUD_0068 dTDP-4-dehydrorhamnose 3,5- epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003474221.1 KEGG: cja:CJA_3436 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase YP_003474222.1 KEGG: pnu:Pnuc_1510 hypothetical protein YP_003474223.1 KEGG: dde:Dde_1088 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003474224.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: nam:NAMH_0504 aspartate carbamoyltransferase YP_003474225.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: gsu:GSU1124 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003474226.1 KEGG: hhe:HH0135 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003474227.1 PFAM: myo-inositol-1-phosphate synthase; myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: noc:Noc_2981 myo-inositol-1-phosphate synthase YP_003474228.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: esa:ESA_04099 3-deoxy-D-manno-octulosonic- acid transferase YP_003474229.1 PFAM: conserved hypothetical protein; KEGG: pae:PA4313 hypothetical protein YP_003474230.1 TIGRFAM:5- methyltetrahydropteroyltriglutamate/homocy steineS-methyltransferase; KEGG: nis:NIS_0886 5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_003474231.1 PFAM: zinc/iron permease; KEGG: eba:ebA4529 metal transporter YP_003474232.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: pca:Pcar_1325 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003474233.1 KEGG: nam:NAMH_1247 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003474234.1 PFAM: cytochrome oxidase assembly; KEGG: gur:Gura_0405 cytochrome oxidase assembly YP_003474235.1 KEGG: tgr:Tgr7_3003 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003474236.1 KEGG: tgr:Tgr7_3002 hypothetical protein YP_003474237.1 TIGRFAM: stationary-phase survival protein SurE; KEGG: glo:Glov_1087 stationary phase survival protein SurE; PFAM: Survival protein SurE YP_003474238.1 PFAM: Hsp33 protein; KEGG: gem:GM21_3620 HSP33 protein YP_003474239.1 KEGG: nis:NIS_1537 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003474240.1 KEGG: ppd:Ppro_2045 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003474241.1 KEGG: gur:Gura_3731 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003474242.1 KEGG: dol:Dole_0477 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003474243.1 PFAM: protein of unknown function DUF399; KEGG: noc:Noc_1357 hypothetical protein YP_003474245.1 KEGG: dat:HRM2_13870 hypothetical protein YP_003474246.1 KEGG: nis:NIS_1563 general secretory pathway protein E YP_003474247.1 PFAM: glycosyl transferase family 2; KEGG: xcv:XCV3650 glycosyltransferase YP_003474248.1 KEGG: tdn:Suden_1220 glycosyltransferase YP_003474250.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: sfu:Sfum_2791 recombination protein RecR; SMART: Toprim sub domain protein YP_003474251.1 KEGG: rpr:RP306 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like YP_003474252.1 KEGG: geo:Geob_0480 hypothetical protein YP_003474253.1 PFAM: alpha/beta hydrolase fold; thioesterase; KEGG: neu:NE2298 biotin biosynthesis protein BioH YP_003474254.1 PFAM: methyltransferase type 11; methionine biosynthesis MetW protein; methyltransferase type 12; KEGG: sgl:SG0905 biotin synthesis protein BioC YP_003474255.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: gme:Gmet_1014 peptidase S1C, Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003474256.1 KEGG: nam:NAMH_0615 rna polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 1.2 YP_003474257.1 KEGG: hit:NTHI1834 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_003474258.1 KEGG: nis:NIS_0070 D-tyrosyl-tRNA deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003474259.1 PFAM: OmpA/MotB domain protein; KEGG: nam:NAMH_1356 major outer membrane protein YP_003474260.1 PFAM: cytochrome C oxidase subunit III; KEGG: cox3; cytochrome C oxidase subunit 3; K02262 cytochrome C oxidase subunit III YP_003474261.1 PFAM: electron transporter SCO1/SenC; KEGG: mxa:MXAN_6085 hypothetical protein YP_003474262.1 KEGG: bba:Bd0286 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_003474263.1 KEGG: gur:Gura_0408 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I YP_003474265.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: wbm:Wbm0124 single-stranded DNA-specific exonuclease RecJ YP_003474266.1 KEGG: dal:Dalk_3130 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003474267.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; KEGG: gsu:GSU1276 carbamoyl-phosphate synthase, large subunit YP_003474268.1 PFAM: glycosyl transferase family 39; KEGG: gbm:Gbem_2984 glycosyl transferase family 39 YP_003474269.1 KEGG: gme:Gmet_0864 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003474270.1 KEGG: nis:NIS_1544 histidine biosynthesis bifunctional protein HisI; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase YP_003474271.1 KEGG: aeh:Mlg_1159 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein YP_003474272.1 KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_003474273.1 PFAM: dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: dat:HRM2_08790 cytochrome-c3 hydrogenase, subunit gamma (electron transfer subunit) YP_003474274.1 KEGG: dvu:DVU1655 LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II YP_003474275.1 PFAM: CBS domain containing protein; KEGG: mfa:Mfla_1388 diguanylate cyclase/phosphodiesterase YP_003474276.1 KEGG: tgr:Tgr7_2162 histone deacetylase superfamily; PFAM: histone deacetylase superfamily YP_003474277.1 KEGG: gur:Gura_2244 adenosylmethionine-8-amino-7- oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_003474279.1 PFAM: protein of unknown function DUF100; KEGG: sat:SYN_02232 fructose-1,6-bisphosphatase YP_003474280.1 PFAM: NikR nickel binding; CopG domain protein DNA- binding domain protein; KEGG: ccv:CCV52592_1897 nickel responsive regulator YP_003474281.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: rma:Rmag_1024 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_003474282.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfa:Mfla_1874 condensin subunit ScpA YP_003474283.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: nis:NIS_0425 ubiquinone/menaquinone biosynthesis methyltransferase YP_003474284.1 KEGG: sde:Sde_1009 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003474285.1 KEGG: net:Neut_0955 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003474286.1 KEGG: similar to alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1) ; K09378 AT-binding transcription factor 1 YP_003474288.1 TIGRFAM: tryptophan synthase, subunit alpha; KEGG: hypothetical protein ; K01695 tryptophan synthase alpha chain; PFAM: tryptophan synthase alpha chain YP_003474289.1 PFAM: OsmC family protein; KEGG: eca:ECA4063 hypothetical protein YP_003474290.1 KEGG: mmb:Mmol_0156 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003474291.1 KEGG: nis:NIS_0670 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_003474292.1 KEGG: sat:SYN_01399 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003474293.1 KEGG: hiq:CGSHiGG_03685 hypothetical protein YP_003474294.1 KEGG: pca:Pcar_1666 6-carboxyhexanoate--CoA ligase; TIGRFAM: 6-carboxyhexanoate/CoA ligase YP_003474295.1 PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: dds:Ddes_1404 domain of unknown function DUF1732 YP_003474297.1 KEGG: tgr:Tgr7_2003 outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_003474298.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mes:Meso_3229 GCN5-related N- acetyltransferase YP_003474299.1 KEGG: smt:Smal_1674 protein of unknown function DUF87; PFAM: protein of unknown function DUF87; phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003474300.1 KEGG: dal:Dalk_5213 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein YP_003474301.1 KEGG: aap:NT05HA_2253 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003474302.1 TIGRFAM: alanyl-tRNA synthetase; KEGG: pca:Pcar_2408 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; threonyl/alanyl tRNA synthetase SAD YP_003474303.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bme:BMEII0865 1-carboxy-3-chloro-3,4- dihydroxycyclo hexa-1,5-diene dehydrogenase YP_003474304.1 KEGG: sat:SYN_01902 mannosyltransferase YP_003474305.1 PFAM: glycosyl transferase group 1; KEGG: sat:SYN_01902 mannosyltransferase YP_003474306.1 KEGG: mpt:Mpe_A1885 50S ribosomal protein L20P; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003474307.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: pst:PSPTO_2382 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003474308.1 TIGRFAM: anthranilate synthase component I; KEGG: gem:GM21_1804 anthranilate synthase component I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_003474309.1 PFAM: disulfide bond isomerase, DsbC/G-like; KEGG: aci:ACIAD0713 thiol:disulphide interchange protein (DsbC-like) YP_003474310.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: gur:Gura_3246 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003474311.1 KEGG: nis:NIS_1777 hypothetical protein; TIGRFAM: siroheme synthase YP_003474313.1 KEGG: sun:SUN_1848 hypothetical protein YP_003474315.1 KEGG: afe:Lferr_0167 copper-translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003474316.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: dal:Dalk_4117 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_003474317.1 PFAM: CoA-binding protein; KEGG: pla:Plav_2934 CoA-binding domain-containing protein YP_003474318.1 KEGG: nis:NIS_1547 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003474319.1 KEGG: dps:DP0765 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003474320.1 TIGRFAM: glycyl-tRNA synthetase, subunit alpha; KEGG: dvl:Dvul_1265 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha YP_003474321.1 PFAM: cytochrome C oxidase subunit III; KEGG: COX3; cytochrome C oxidase subunit III ; K02262 cytochrome C oxidase subunit III YP_003474322.1 KEGG: gur:Gura_0415 hypothetical protein YP_003474323.1 KEGG: dde:Dde_1826 cytochrome C oxidase subunit II, TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_003474324.1 KEGG: gur:Gura_0408 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I YP_003474325.1 PFAM: 4-vinyl reductase 4VR YP_003474329.1 PFAM: cytochrome C oxidase subunit II; KEGG: mca:MCA2397 cytochrome C oxidase subunit II YP_003474330.1 PFAM: cytochrome C oxidase subunit I; KEGG: bph:Bphy_0347 cytochrome C oxidase subunit I YP_003474331.1 PFAM: electron transporter SCO1/SenC; KEGG: dvm:DvMF_0537 uncharacterized protein involved in biogenesis of respiratory and photosynthetic systems-like protein YP_003474333.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: noc:Noc_1348 6-phosphogluconolactonase YP_003474334.1 KEGG: net:Neut_2143 glucose-6-phosphate 1- dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003474335.1 KEGG: dal:Dalk_3008 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein YP_003474337.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: gem:GM21_3524 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003474338.1 KEGG: nam:NAMH_0649 phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_003474339.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; KEGG: cff:CFF8240_0946 phosphoribosylformylglycinamidine synthase, PurS protein YP_003474340.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM protein; KEGG: geo:Geob_1978 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB YP_003474341.1 KEGG: geo:Geob_1509 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding YP_003474342.1 PFAM: peptidase zinc-dependent; KEGG: sat:SYN_01286 zinc metalloprotease YP_003474343.1 KEGG: cco:CCC13826_1061 hypothetical protein YP_003474344.1 PFAM: PHP domain protein; KEGG: nis:NIS_1287 family X DNA polymerase IV; SMART: DNA polymerase X; phosphoesterase PHP domain protein; DNA-binding protein YP_003474345.1 KEGG: afw:Anae109_3989 helicase domain-containing protein; PFAM: helicase; SNF2-related protein; type III restriction protein res subunit; SMART: helicase; DEAD-like helicase YP_003474346.1 PFAM: protein of unknown function DUF1156; KEGG: afw:Anae109_3988 hypothetical protein YP_003474347.1 KEGG: ppd:Ppro_1875 hypothetical protein YP_003474353.1 KEGG: axoneme-associated protein mst101 YP_003474354.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ilo:IL0826 site-specific recombinase YP_003474355.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: geo:Geob_1490 tRNA (guanine-N1)- methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003474356.1 PFAM: glycosyl transferase group 1; KEGG: xfm:Xfasm12_1970 lipopolysaccharide biosynthesis protein YP_003474357.1 KEGG: bmi:BMEA_A1592 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP- binding protein HSR1-related YP_003474358.1 KEGG: similar to One cut domain family member 2 (transcription factor ONECUT-2) (OC-2)