-- dump date   	20111121_015336
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004627046.1	SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: dat:HRM2_18560 DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal
YP_004627047.1	KEGG: glo:Glov_0464 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal
YP_004627048.1	PFAM: PP-loop; KEGG: dal:Dalk_1237 PP-loop domain protein
YP_004627049.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: sfu:Sfum_0050 lytic transglycosylase catalytic subunit
YP_004627050.1	PFAM: Mechanosensitive ion channel MscS; KEGG: hth:HTH_1400 mechanosensitive ion channel
YP_004627051.1	KEGG: aae:aq_1434 pilin
YP_004627052.1	KEGG: hya:HY04AAS1_0157 pilin
YP_004627053.1	KEGG: hya:HY04AAS1_0156 hypothetical protein
YP_004627054.1	KEGG: hya:HY04AAS1_0155 hypothetical protein
YP_004627055.1	KEGG: saf:SULAZ_0239 type IV prepilin leader peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV
YP_004627056.1	PFAM: Type IV pilus assembly PilZ
YP_004627057.1	KEGG: tye:THEYE_A0332 YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related
YP_004627058.1	TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: hor:Hore_01660 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase
YP_004627059.1	TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; KEGG: cni:Calni_0593 ribose-5-phosphate isomerase; PFAM: Ribose/galactose isomerase
YP_004627060.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: tye:THEYE_A0103 beta-ketoacyl-acyl carrier protein synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004627061.1	TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: ddf:DEFDS_0153 acyl carrier protein ACP; PFAM: Phosphopantetheine-binding
YP_004627062.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein
YP_004627063.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: dal:Dalk_0348 permease YjgP/YjgQ family protein
YP_004627064.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: hor:Hore_12830 putative oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004627065.1	PFAM: Methyltransferase type 11; KEGG: tte:TTE0102 SAM-dependent methyltransferase
YP_004627066.1	KEGG: tye:THEYE_A0925 MoaA/NifB/PqqE family protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627067.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: dte:Dester_0689 ribosomal RNA large subunit methyltransferase N; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM
YP_004627068.1	TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: sat:SYN_00123 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT
YP_004627069.1	KEGG: ddf:DEFDS_2124 serine--glyoxylate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004627070.1	TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: ddf:DEFDS_1091 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_004627071.1	PFAM: AICARFT/IMPCHase bienzyme, formylation region; KEGG: dak:DaAHT2_1420 IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme, formylation region
YP_004627072.1	TIGRFAM: Glycosyl transferase, family 19; KEGG: nde:NIDE3037 lipid-A-disaccharide synthetase; PFAM: Glycosyl transferase, family 19
YP_004627073.1	PFAM: Oxidoreductase, N-terminal; KEGG: dak:DaAHT2_0812 oxidoreductase domain protein
YP_004627074.1	PFAM: Protein of unknown function DUF1009; KEGG: tye:THEYE_A0089 hypothetical protein
YP_004627075.1	PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: tye:THEYE_A0090 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_004627076.1	TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: lip:LI1020 (3R)-hydroxymyristoyl-ACP dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004627077.1	KEGG: tjr:TherJR_1140 putative transcriptional regulator, AsnC family
YP_004627078.1	PFAM: Mammalian cell entry related; KEGG: gme:Gmet_1272 virulence factor MCE-like protein-related protein
YP_004627079.1	PFAM: ABC transporter-like; KEGG: sat:SYN_00410 ABC transporter ATP-binding component; SMART: ATPase, AAA+ type, core
YP_004627080.1	KEGG: drt:Dret_0676 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140
YP_004627081.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: dak:DaAHT2_2250 dihydroxy-acid dehydratase
YP_004627082.1	PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: gme:Gmet_3080 nitrogen-fixing NifU-like
YP_004627083.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: sfu:Sfum_1758 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6
YP_004627084.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: sfu:Sfum_1756 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; Chaperone DnaJ, C-terminal
YP_004627085.1	KEGG: mta:Moth_2134 GTP cyclohydrolase subunit MoaC; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region
YP_004627086.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: sat:SYN_01337 DnaK suppressor protein
YP_004627087.1	TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like; KEGG: nhl:Nhal_0131 excinuclease ABC, A subunit; SMART: ATPase, AAA+ type, core
YP_004627088.1	KEGG: dak:DaAHT2_0620 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004627089.1	PFAM: Protein of unknown function DUF39; KEGG: sfu:Sfum_1059 hypothetical protein
YP_004627090.1	KEGG: abc:ACICU_00347 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004627091.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: ttm:Tthe_1418 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004627092.1	TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: tye:THEYE_A0225 membrane-associated zinc metalloprotease, putative; SMART: PDZ/DHR/GLGF
YP_004627093.1	KEGG: cpf:CPF_2423 glycoprotease family protein; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease
YP_004627094.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dma:DMR_00780 putative peptide ABC transporter permease protein
YP_004627095.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tye:THEYE_A0929 oligopeptide transport system permease protein AppC
YP_004627096.1	KEGG: pcu:pc0861 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core
YP_004627097.1	KEGG: pcu:pc0862 hypothetical protein
YP_004627098.1	KEGG: sfu:Sfum_3765 two component sigma54 specific fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004627099.1	KEGG: dma:DMR_31680 hypothetical protein
YP_004627100.1	KEGG: cni:Calni_1809 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004627101.1	KEGG: toc:Toce_1092 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004627102.1	KEGG: dak:DaAHT2_1190 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal
YP_004627103.1	TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: dte:Dester_1231 flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_004627104.1	KEGG: tye:THEYE_A0267 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal
YP_004627105.1	KEGG: dak:DaAHT2_1187 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG
YP_004627106.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: psm:PSM_A2254 flagellar assembly protein H
YP_004627107.1	TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: cob:COB47_1951 ATPase, FliI/YscN family; SMART: ATPase, AAA+ type, core
YP_004627109.1	PFAM: Magnesium transporter, MgtE intracellular region; KEGG: das:Daes_3004 MgtE intracellular region
YP_004627110.1	PFAM: Sec-independent periplasmic protein translocase; KEGG: dps:DP1763 sec-independent protein translocase protein TatC
YP_004627111.1	KEGG: dak:DaAHT2_0635 phosphoribosylformylglycinamidine synthase; TIGRFAM: Phosphoribosylformylglycinamidine synthase I
YP_004627112.1	KEGG: pmx:PERMA_0605 putative peptidase M1, membrane alanine aminopeptidase
YP_004627113.1	KEGG: tye:THEYE_A1823 DNA-binding protein HU 1; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004627114.1	TIGRFAM: DNA glycosylase/AP lyase; KEGG: adg:Adeg_1023 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_004627115.1	PFAM: Uncharacterised protein family UPF0118; KEGG: aae:aq_740 hypothetical protein
YP_004627116.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: dth:DICTH_1607 putative regulatory protein, FmdB family
YP_004627117.1	PFAM: Protein of unknown function DUF1844; KEGG: sfu:Sfum_3650 hypothetical protein
YP_004627118.1	PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: sat:SYN_03046 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
YP_004627119.1	TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: dps:DP2734 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase
YP_004627120.1	TIGRFAM: Ribosomal protein L25; HAMAP: Ribosomal protein L25; KEGG: tam:Theam_0297 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal
YP_004627121.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: chy:CHY_0196 peptidyl-tRNA hydrolase
YP_004627122.1	KEGG: afw:Anae109_2844 hypothetical protein
YP_004627123.1	PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: tye:THEYE_A0205 GMP synthase
YP_004627124.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: aae:aq_1542 hypothetical protein
YP_004627125.1	PFAM: Amino acid-binding ACT; KEGG: dau:Daud_0194 beta-lactamase domain-containing protein
YP_004627126.1	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein
YP_004627127.1	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: geo:Geob_2610 50S ribosomal protein L32; PFAM: Ribosomal protein L32p
YP_004627128.1	TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: dte:Dester_0883 phosphate acyltransferase; PFAM: Fatty acid synthesis plsX protein
YP_004627129.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: adg:Adeg_0956 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_004627130.1	KEGG: dba:Dbac_2432 protein of unknown function DUF1078 domain protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal
YP_004627131.1	KEGG: tye:THEYE_A0275 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Flagellar basal body FlaE
YP_004627132.1	PFAM: Flagellar hook capping protein; KEGG: fno:Fnod_1538 flagellar hook capping protein
YP_004627133.1	KEGG: tva:TVAG_458080 viral A-type inclusion protein
YP_004627134.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: mmb:Mmol_1593 proton-translocating NADH-quinone oxidoreductase, chain N
YP_004627135.1	TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: tye:THEYE_A0920 NADH-quinone oxidoreductase chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004627136.1	TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: dpr:Despr_1869 NADH dehydrogenase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NADH dehydrogenase subunit 5, C-terminal
YP_004627137.1	KEGG: nit:NAL212_2731 NAD(P)H-quinone oxidoreductase subunit 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L
YP_004627138.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: dpr:Despr_1867 NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004627139.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: tye:THEYE_A1124 NADH-quinone oxidoreductase, chain I subfamily, putative
YP_004627140.1	HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: dpr:Despr_1865 NADH dehydrogenase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1
YP_004627141.1	PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: tye:THEYE_A0914 NADH dehydrogenase I, D subunit
YP_004627142.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: tye:THEYE_A0913 NADH-quinone oxidoreductase chain C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit
YP_004627143.1	PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: tye:THEYE_A1126 NADH-quinone oxidoreductase chain b 2
YP_004627144.1	KEGG: dar:Daro_0949 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004627145.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tga:TGAM_0248 formate dehydrogenase I subunit B (fdh1B)
YP_004627146.1	PFAM: Prokaryotic chromosome segregation/condensation protein ScpA
YP_004627147.1	PFAM: CoA-binding; KEGG: tvo:TVN0743 CoA-binding protein
YP_004627148.1	TIGRFAM: Triosephosphate isomerase; KEGG: dte:Dester_0584 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_004627149.1	HAMAP: Phosphoglycerate kinase; KEGG: ddf:DEFDS_1892 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004627150.1	TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: adg:Adeg_1979 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004627151.1	PFAM: Septum formation initiator
YP_004627153.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: dak:DaAHT2_0891 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme
YP_004627154.1	TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: chd:Calhy_2204 SsrA-binding protein; PFAM: SsrA-binding protein
YP_004627155.1	KEGG: pmo:Pmob_0084 exonuclease SbcC
YP_004627156.1	HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: cpr:CPR_1762 molybdopterin-guanine dinucleotide biosynthesis protein-like protein
YP_004627157.1	KEGG: dat:HRM2_33390 two-component transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region
YP_004627158.1	PFAM: Protein of unknown function DUF72; KEGG: tye:THEYE_A1271 DUF72
YP_004627160.1	PFAM: Nucleoside phosphorylase; KEGG: ppd:Ppro_3274 purine phosphorylases family protein 1
YP_004627161.1	KEGG: ddf:DEFDS_1123 hypothetical protein
YP_004627162.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: tye:THEYE_A0959 TolQ protein
YP_004627163.1	KEGG: dbr:Deba_1136 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004627164.1	TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: dak:DaAHT2_1639 outer membrane assembly lipoprotein YfiO
YP_004627166.1	TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: tye:THEYE_A1021 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif
YP_004627167.1	PFAM: Pseudouridine synthase, TruD; KEGG: tye:THEYE_A0547 tRNA pseudouridine synthase D
YP_004627168.1	KEGG: maq:Maqu_0789 lipopolysaccharide heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9
YP_004627169.1	KEGG: ttm:Tthe_0744 putative alkylmercury lyase
YP_004627170.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: mfe:Mefer_0445 anthranilate phosphoribosyltransferase
YP_004627171.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: hth:HTH_1607 putative Zn-dependent protease
YP_004627172.1	PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: dte:Dester_0768 enolase
YP_004627173.1	PFAM: Carbohydrate/purine kinase; KEGG: lba:Lebu_0628 RfaE bifunctional protein
YP_004627174.1	SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: gsu:GSU0145 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA
YP_004627175.1	KEGG: bpo:BP951000_0286 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004627176.1	KEGG: pmo:Pmob_0085 nuclease SbcCD, D subunit; TIGRFAM: Exonuclease SbcD; PFAM: Metallophosphoesterase
YP_004627177.1	PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: dpr:Despr_0523 dihydrodipicolinate reductase
YP_004627178.1	PFAM: ATPase-like, ParA/MinD; KEGG: amu:Amuc_2037 cobyrinic acid ac-diamide synthase
YP_004627179.1	PFAM: Protein of unknown function DUF364; KEGG: ssm:Spirs_3702 protein of unknown function DUF364
YP_004627181.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: dal:Dalk_5046 glutamate racemase
YP_004627182.1	PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: slp:Slip_2175 acetylornithine and succinylornithine aminotransferase
YP_004627183.1	KEGG: mja:MJ_1487 hypothetical protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB
YP_004627186.1	PFAM: Fungal mating-type pheromone; KEGG: dsa:Desal_2367 beta-lactamase domain protein
YP_004627187.1	KEGG: mel:Metbo_0698 type 11 methyltransferase
YP_004627188.1	HAMAP: Endonuclease V; KEGG: tal:Thal_0902 deoxyribonuclease V; PFAM: Endonuclease V
YP_004627189.1	KEGG: mja:MJECL42 type I restriction system protein M; PFAM: DNA methylase, adenine-specific
YP_004627190.1	KEGG: hpa:HPAG1_1365 hypothetical protein
YP_004627191.1	PFAM: MTH538 TIR-like domain; KEGG: mms:mma_2730 hypothetical protein
YP_004627192.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mja:MJECL41 type I restriction enzyme subunit S
YP_004627193.1	PFAM: Nucleotidyltransferase; KEGG: mac:MA0099 hypothetical protein
YP_004627194.1	KEGG: hya:HY04AAS1_1590 nucleotidyltransferase substrate binding protein, HI0074 family; TIGRFAM: Nucleotidyltransferase substrate binding protein, HI0074; PFAM: Nucleotidyltransferase substrate binding protein, HI0074
YP_004627195.1	TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; KEGG: mja:MJECL40 type I restriction enzyme subunit R; SMART: DEAD-like helicase, N-terminal
YP_004627196.1	KEGG: tit:Thit_1359 large conductance mechanosensitive channel protein; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel
YP_004627197.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: tme:Tmel_1752 flavin reductase domain-containing protein
YP_004627198.1	SMART: Tetratricopeptide repeat; KEGG: dps:DP1944 hypothetical protein
YP_004627199.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: sfu:Sfum_2138 hypothetical protein
YP_004627200.1	TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: sat:SYN_00578 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding
YP_004627201.1	TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: dtu:Dtur_0883 dephospho-CoA kinase
YP_004627202.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dtu:Dtur_1813 pseudouridine synthase, RluA family; SMART: RNA-binding S4
YP_004627203.1	PFAM: Protein of unknown function DUF583; KEGG: hth:HTH_0078 hypothetical protein
YP_004627204.1	PFAM: Peptidase M23; KEGG: hth:HTH_0200 putative lipoprotein
YP_004627205.1	KEGG: adg:Adeg_1657 ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15
YP_004627206.1	SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: sfu:Sfum_1550 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5
YP_004627207.1	TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: sfu:Sfum_1549 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7
YP_004627208.1	TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: tte:TTE2303 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal
YP_004627209.1	KEGG: tjr:TherJR_0285 ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_004627210.1	KEGG: sfu:Sfum_1546 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_004627211.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: trq:TRQ2_0481 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_004627212.1	KEGG: sfu:Sfum_1544 NusG antitermination factor; PFAM: KOW; Transcription antitermination protein, NusG, N-terminal; SMART: KOW
YP_004627213.1	KEGG: dol:Dole_0696 preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein
YP_004627214.1	TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: tam:Theam_1586 ribosomal protein L33; PFAM: Ribosomal protein L33
YP_004627215.1	KEGG: toc:Toce_2107 translation elongation factor 1A (EF-1A/EF-Tu); TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004627216.1	KEGG: tye:THEYE_A1829 QmoC
YP_004627217.1	PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: afu:AF0662 heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta
YP_004627218.1	PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: tye:THEYE_A1831 CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2
YP_004627219.1	KEGG: drt:Dret_1966 adenylylsulfate reductase subunit alpha; TIGRFAM: Adenylylsulphate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase
YP_004627220.1	KEGG: dsa:Desal_0229 adenylylsulfate reductase, beta subunit; TIGRFAM: Adenylylsulphate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004627221.1	KEGG: tye:THEYE_A1834 hypothetical protein
YP_004627222.1	TIGRFAM: Sulphate adenylyltransferase; KEGG: tye:THEYE_A1835 sulfate adenylyltransferase; PFAM: Sulphate adenylyltransferase
YP_004627223.1	KEGG: sfu:Sfum_1586 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase
YP_004627224.1	PFAM: Haloacid dehalogenase-like hydrolase; KEGG: dak:DaAHT2_2039 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_004627225.1	PFAM: DNA helicase, UvrD/REP type; KEGG: rsd:TGRD_136 RecB-like exodeoxyribonuclease V beta chain
YP_004627226.1	KEGG: bbe:BBR47_20330 hypothetical protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_004627228.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: tye:THEYE_A1919 hypothetical protein
YP_004627229.1	PFAM: UspA; KEGG: tye:THEYE_A0762 universal stress protein, putative
YP_004627230.1	TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: sat:SYN_00640 replicative DNA helicase; SMART: ATPase, AAA+ type, core
YP_004627231.1	TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: sat:SYN_00641 50S ribosomal protein L9P; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal
YP_004627232.1	TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: atm:ANT_22430 30S ribosomal protein S18; PFAM: Ribosomal protein S18
YP_004627233.1	TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: sfu:Sfum_3188 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_004627234.1	PFAM: NUDIX hydrolase domain; KEGG: dvl:Dvul_0325 NUDIX hydrolase
YP_004627235.1	KEGG: tam:Theam_1017 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal
YP_004627236.1	KEGG: tye:THEYE_A1300 probable endopeptidase LytE; PFAM: NLP/P60; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004627237.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dak:DaAHT2_1538 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004627239.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: dak:DaAHT2_1635 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_004627240.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Thymidylate kinase; KEGG: fpl:Ferp_2261 thymidylate kinase; HAMAP: Thymidylate kinase; PFAM: Thymidylate kinase-like; Protein of unknown function DUF265
YP_004627241.1	KEGG: dal:Dalk_1036 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal
YP_004627242.1	KEGG: gur:Gura_4075 hypothetical protein
YP_004627243.1	PFAM: Uncharacterised protein family UPF0027; KEGG: drt:Dret_0333 hypothetical protein
YP_004627244.1	TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: ddf:DEFDS_2155 ATP-dependent protease HslVU, peptidase subunit HslV; PFAM: Proteasome, subunit alpha/beta
YP_004627245.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: ddf:DEFDS_2156 ATP-dependent protease HslVU, ATPase subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; Clp ATPase, C-terminal
YP_004627246.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: tbo:Thebr_1223 MiaB-like tRNA modifying enzyme YliG; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM
YP_004627247.1	PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: pmx:PERMA_1512 aspartate alpha-decarboxylase
YP_004627248.1	TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: cki:Calkr_0726 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase
YP_004627249.1	PFAM: YkuD domain; KEGG: nwa:Nwat_1413 ErfK/YbiS/YcfS/YnhG family protein
YP_004627250.1	KEGG: tye:THEYE_A0136 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047
YP_004627251.1	PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: sat:SYN_01414 TPR repeat-containing protein
YP_004627252.1	TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: tye:THEYE_A0650 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004627253.1	KEGG: afr:AFE_2671 phospho-2-dehydro-3-deoxyheptonate aldolase, putative; PFAM: DAHP synthetase I/KDSA
YP_004627254.1	PFAM: ThiJ/PfpI; KEGG: sta:STHERM_c06320 hypothetical protein
YP_004627257.1	PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal; KEGG: sat:SYN_00938 phosphomannomutase
YP_004627258.1	PFAM: Protein of unknown function DUF721
YP_004627259.1	TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: tye:THEYE_A1310 HD domain protein; SMART: Metal-dependent phosphohydrolase, HD region
YP_004627260.1	PFAM: Lactate/malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent; HAMAP: Malate dehydrogenase, NAD-dependent; KEGG: dak:DaAHT2_0941 malate dehydrogenase, NAD-dependent
YP_004627261.1	TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: dth:DICTH_0942 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like
YP_004627262.1	PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: toc:Toce_1187 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase
YP_004627263.1	KEGG: fma:FMG_0655 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732
YP_004627264.1	KEGG: aae:aq_052 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase
YP_004627265.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fjo:Fjoh_0202 cobyrinic acid a,c-diamide synthase
YP_004627266.1	PFAM: Radical SAM; KEGG: cni:Calni_0833 radical sam domain protein
YP_004627267.1	PFAM: AT hook, DNA-binding motif
YP_004627268.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tye:THEYE_A0116 transcriptional regulator, TetR family
YP_004627269.1	KEGG: sku:Sulku_2655 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004627270.1	KEGG: ant:Arnit_0634 hydrophobe/amphiphile efflux transporter; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004627271.1	KEGG: sku:Sulku_2653 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004627272.1	PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; KEGG: ter:Tery_2096 adenosylmethionine decarboxylase proenzyme
YP_004627273.1	HAMAP: Spermidine synthase; KEGG: tvo:TVN0417 spermidine synthase; PFAM: Spermine synthase
YP_004627274.1	KEGG: dpr:Despr_2538 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase putative
YP_004627275.1	KEGG: dak:DaAHT2_2214 hypothetical protein
YP_004627276.1	TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: dte:Dester_0737 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region
YP_004627277.1	KEGG: ctc:CTC02158 putative anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal
YP_004627278.1	KEGG: dth:DICTH_0557 aminotransferase, class V superfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004627279.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; DEAD-like helicase, N-terminal; Toprim domain, subgroup; TIGRFAM: Reverse gyrase; KEGG: aae:aq_1159 reverse gyrase; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal
YP_004627280.1	KEGG: dpr:Despr_1966 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein
YP_004627281.1	KEGG: dak:DaAHT2_0246 penicillin-binding protein, 1A family; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004627282.1	TIGRFAM: Diguanylate cyclase, predicted; Haemerythrin-like, metal-binding; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: pmx:PERMA_0255 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004627283.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: tye:THEYE_A1050 sodium/hydrogen exchanger family/TrkA domain protein
YP_004627284.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: kol:Kole_1745 peptidylprolyl isomerase FKBP-type
YP_004627285.1	TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: cob:COB47_1395 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_004627286.1	KEGG: tye:THEYE_A0694 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like
YP_004627287.1	KEGG: dak:DaAHT2_0073 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_004627288.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: sfu:Sfum_1590 shikimate/quinate 5-dehydrogenase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal
YP_004627289.1	PFAM: Cytochrome c assembly protein; KEGG: gme:Gmet_3232 cytochrome c assembly protein
YP_004627290.1	PFAM: UspA; KEGG: sfu:Sfum_0646 UspA domain-containing protein
YP_004627291.1	KEGG: nth:Nther_0671 radical SAM domain protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB
YP_004627292.1	KEGG: sat:SYN_00931 integrin-like repeat-containing protein
YP_004627293.1	PFAM: Protein of unknown function DUF498; KEGG: tye:THEYE_A0511 hypothetical protein
YP_004627294.1	TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: tte:TTE0143 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor
YP_004627295.1	TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: cow:Calow_0886 50S ribosomal protein L31; PFAM: Ribosomal protein L31
YP_004627296.1	KEGG: dth:DICTH_1522 glucose-1-phosphate thymidylyltransferase
YP_004627297.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: cni:Calni_0191 ppic-type peptidyl-prolyl cis-trans isomerase
YP_004627298.1	KEGG: mba:Mbar_A1749 hypothetical protein
YP_004627299.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dpr:Despr_3341 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004627300.1	PFAM: SurA N-terminal; KEGG: dat:HRM2_28180 PpiD2
YP_004627301.1	TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO; KEGG: sat:SYN_01535 DNA repair protein; PFAM: Recombination protein O, RecO
YP_004627302.1	KEGG: cni:Calni_1857 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730
YP_004627303.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: dth:DICTH_1465 aspartate carbamoyltransferase
YP_004627304.1	KEGG: dte:Dester_0705 dihydroorotase, multifunctional complex type; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 1
YP_004627305.1	TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: ddf:DEFDS_0033 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_004627306.1	PFAM: YkuD domain; KEGG: noc:Noc_0717 hypothetical protein
YP_004627307.1	TIGRFAM: Cysteine synthase K/M; Cysteinyl-tRNA synthetase, class Ia; KEGG: dpr:Despr_3183 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cysteinyl-tRNA synthetase, class Ia, N-terminal
YP_004627308.1	KEGG: dpr:Despr_2593 DNA-3-methyladenine glycosylase III; PFAM: HhH-GPD domain; SMART: HhH-GPD domain
YP_004627309.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: sat:SYN_00035 DMT family permease
YP_004627310.1	PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: aps:CFPG_329 cob(I)alamin adenosyltransferase
YP_004627311.1	TIGRFAM: menaquinone biosynthesis protein; FO synthase, subunit 2; PFAM: Radical SAM; KEGG: dsa:Desal_1215 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004627312.1	KEGG: dpr:Despr_1798 amidohydrolase; PFAM: Amidohydrolase 1
YP_004627313.1	PFAM: Protein of unknown function DUF178; KEGG: tjr:TherJR_1771 protein of unknown function DUF178
YP_004627314.1	TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: ddf:DEFDS_1643 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004627315.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: tcx:Tcr_1143 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004627316.1	KEGG: fpl:Ferp_0999 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627317.1	KEGG: adg:Adeg_1793 beta-lactamase domain protein
YP_004627318.1	KEGG: nam:NAMH_1041 probable inorganic polyphosphate/ATP-NAD kinase (poly(P)/ATP NAD kinase); HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase
YP_004627319.1	KEGG: tye:THEYE_A1391 hypothetical protein
YP_004627320.1	KEGG: tme:Tmel_1816 methyl-accepting chemotaxis sensory transducer
YP_004627321.1	TIGRFAM: Alpha-glucan phosphorylase; KEGG: cni:Calni_0992 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35
YP_004627322.1	KEGG: lip:LI0331 alpha-amylase; PFAM: Glycoside hydrolase, family 57, core
YP_004627323.1	PFAM: Glycosyl transferase, group 1; Starch synthase catalytic region; KEGG: amu:Amuc_1869 glycosyl transferase group 1
YP_004627324.1	PFAM: Amylo-alpha-1,6-glucosidase; KEGG: hor:Hore_08610 glycogen debranching enzyme, putative
YP_004627325.1	KEGG: saf:SULAZ_0095 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related
YP_004627326.1	KEGG: dps:DP1730 hypothetical protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004627327.1	HAMAP: Bifunctional protein pyrR; KEGG: aar:Acear_0893 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004627328.1	TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: geb:GM18_0634 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_004627329.1	KEGG: tye:THEYE_A1270 hypothetical protein
YP_004627330.1	KEGG: ddf:DEFDS_0617 multidrug-efflux transporter MFS family; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004627331.1	PFAM: Secretion protein HlyD; KEGG: hth:HTH_0028 multidrug resistance efflux pump
YP_004627332.1	KEGG: deg:DehalGT_0699 thymidylate synthase, putative
YP_004627333.1	PFAM: Type IV pilus assembly PilZ
YP_004627334.1	KEGG: adg:Adeg_0996 hypothetical protein
YP_004627335.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: hth:HTH_1772 long-chain fatty acid transport protein
YP_004627336.1	PFAM: Phosphoglucose isomerase (PGI); KEGG: sfu:Sfum_1952 phosphoglucose isomerase
YP_004627337.1	KEGG: dak:DaAHT2_0346 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_004627338.1	KEGG: dak:DaAHT2_1328 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria
YP_004627339.1	KEGG: hor:Hore_10320 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding
YP_004627340.1	TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: saf:SULAZ_1518 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_004627341.1	KEGG: ddf:DEFDS_2147 negative regulator of flagellin synthesis FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_004627342.1	KEGG: dpr:Despr_3011 RfaE bifunctional protein; TIGRFAM: RfaE bifunctional protein, domain II; Cytidyltransferase-related; PFAM: Cytidylyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004627343.1	PFAM: Phosphoribosyltransferase; KEGG: cdl:CDR20291_0132 putative phosphoribosyl transferase
YP_004627344.1	KEGG: dat:HRM2_27370 PepT; TIGRFAM: Peptidase M20B, peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20
YP_004627345.1	KEGG: sfu:Sfum_1427 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like
YP_004627348.1	TIGRFAM: ATPase, anion-transporting; KEGG: tal:Thal_0948 arsenite-activated ATPase ArsA; PFAM: ATPase, anion-transporting
YP_004627349.1	KEGG: dol:Dole_2231 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44
YP_004627350.1	SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: chy:CHY_0258 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein
YP_004627351.1	KEGG: dte:Dester_1082 hypothetical protein
YP_004627352.1	PFAM: Protein of unknown function DUF125, transmembrane; KEGG: sta:STHERM_c17420 hypothetical protein
YP_004627353.1	TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic-like; PFAM: Radical SAM; KEGG: pca:Pcar_2732 pyruvate-formate lyase-activating enzyme; SMART: Elongator protein 3/MiaB/NifB
YP_004627354.1	TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: saf:SULAZ_0957 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase
YP_004627355.1	PFAM: NADPH-dependent FMN reductase; KEGG: sfu:Sfum_1392 NADPH-dependent FMN reductase
YP_004627358.1	KEGG: dol:Dole_2131 hypothetical protein
YP_004627359.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: sku:Sulku_1979 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_004627360.1	KEGG: iag:Igag_0932 hypothetical protein
YP_004627361.1	TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dte:Dester_1366 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase
YP_004627362.1	PFAM: Nucleotidyltransferase; KEGG: saf:SULAZ_0334 DNA polymerase, beta domain protein region
YP_004627363.1	KEGG: ddf:DEFDS_0355 hypothetical protein
YP_004627364.1	KEGG: tye:THEYE_A0178 hypothetical protein
YP_004627366.1	PFAM: Flagellin assembly, membrane protein MviN; KEGG: aae:aq_509 hypothetical protein
YP_004627367.1	KEGG: tye:THEYE_A0178 hypothetical protein
YP_004627370.1	PFAM: Protein of unknown function DUF2281; KEGG: dau:Daud_1677 hypothetical protein
YP_004627371.1	PFAM: PilT protein, N-terminal; KEGG: hya:HY04AAS1_0453 PilT protein domain protein
YP_004627372.1	PFAM: Polysaccharide biosynthesis protein; KEGG: dte:Dester_1359 polysaccharide biosynthesis protein
YP_004627373.1	KEGG: gya:GYMC52_3248 hypothetical protein
YP_004627374.1	TIGRFAM: UDP-galactopyranose mutase; KEGG: sul:SYO3AOP1_1566 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase, C-terminal; Glucose-methanol-choline oxidoreductase, N-terminal
YP_004627375.1	PFAM: Glycosyl transferase, family 2; KEGG: pho:PH0424 hypothetical protein
YP_004627376.1	PFAM: Glycosyl transferase, family 2; KEGG: cts:Ctha_2071 family 2 glycosyl transferase
YP_004627377.1	PFAM: Glycosyl transferase, family 2; KEGG: mtp:Mthe_0965 glycosyl transferase family protein
YP_004627378.1	PFAM: Nucleotidyl transferase; KEGG: hya:HY04AAS1_1570 glucose-1-phosphate thymidylyltransferase
YP_004627379.1	PFAM: Glycosyl transferase, family 2; KEGG: cts:Ctha_2068 family 2 glycosyl transferase
YP_004627380.1	PFAM: Glycosyl transferase, group 1; KEGG: plt:Plut_0772 glycosyl transferase, group 1 family protein
YP_004627381.1	PFAM: Glycosyl transferase, family 2; KEGG: cni:Calni_1175 glycosyl transferase family 2
YP_004627382.1	KEGG: gtn:GTNG_3257 polymerase
YP_004627383.1	PFAM: Glycosyl transferase, group 1; KEGG: gur:Gura_3183 glycosyl transferase, group 1
YP_004627384.1	PFAM: Glycosyl transferase, group 1; KEGG: tal:Thal_0135 glycosyl transferase group 1
YP_004627385.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: sul:SYO3AOP1_1388 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004627386.1	PFAM: Uncharacterised protein family UPF0150; KEGG: mem:Memar_1097 hypothetical protein
YP_004627387.1	PFAM: YcfA-like; KEGG: cyn:Cyan7425_1350 YcfA family protein
YP_004627388.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: dte:Dester_1372 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_004627389.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dte:Dester_1373 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004627390.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: saf:SULAZ_0365 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004627391.1	PFAM: PilT protein, N-terminal; KEGG: ton:TON_1847 hypothetical nucleic acid-binding protein
YP_004627392.1	PFAM: Protein of unknown function DUF2281; KEGG: pab:PAB7298 hypothetical protein
YP_004627394.1	PFAM: Chordopoxvirus fusion protein; KEGG: sul:SYO3AOP1_0621 hypothetical protein
YP_004627395.1	PFAM: Bacterial sugar transferase; KEGG: hor:Hore_22910 undecaprenyl-phosphate galactose phosphotransferase
YP_004627396.1	KEGG: deb:DehaBAV1_0697 FAD dependent oxidoreductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004627397.1	PFAM: Lipopolysaccharide biosynthesis; KEGG: tmz:Tmz1t_3789 lipopolysaccharide biosynthesis protein
YP_004627398.1	KEGG: geb:GM18_3555 hypothetical protein
YP_004627399.1	PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: aco:Amico_1713 polysaccharide export protein
YP_004627401.1	KEGG: dps:DP1080 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_004627402.1	PFAM: YHS; SMART: TRASH; KEGG: ddf:DEFDS_0351 hypothetical protein
YP_004627403.1	PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; manually curated; KEGG: tye:THEYE_A1015 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004627404.1	TIGRFAM: LL-diaminopimelate aminotransferase; KEGG: hya:HY04AAS1_0487 LL-diaminopimelate aminotransferase; PFAM: Aminotransferase, class I/II
YP_004627405.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like; KEGG: hth:HTH_1533 myo-inositol-1-phosphate synthase
YP_004627406.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: chy:CHY_2704 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004627407.1	SMART: Phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: dak:DaAHT2_0301 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase
YP_004627408.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: nmu:Nmul_A2564 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004627409.1	TIGRFAM: Anthranilate synthase component I; KEGG: tye:THEYE_A0506 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004627410.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: has:Halsa_1638 histidyl-tRNA synthetase
YP_004627411.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dps:DP2890 NADH oxidase; SMART: Rhodanese-like
YP_004627412.1	KEGG: hth:HTH_0318 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal
YP_004627413.1	PFAM: Peptidase M24, structural domain; Creatinase; KEGG: aae:aq_1535 Xaa-Pro dipeptidase
YP_004627414.1	PFAM: Nitrite/sulphite reductase 4Fe-4S region; Proto-chlorophyllide reductase 57kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dol:Dole_0748 proto-chlorophyllide reductase 57 kD subunit
YP_004627415.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dol:Dole_2104 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004627416.1	KEGG: dat:HRM2_40610 hypothetical protein
YP_004627417.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: sfu:Sfum_2937 hemerythrin HHE cation binding domain-containing protein
YP_004627418.1	KEGG: geb:GM18_2729 hypothetical protein
YP_004627419.1	PFAM: Protein of unknown function DUF996; KEGG: mfs:MFS40622_0917 protein of unknown function DUF996
YP_004627420.1	PFAM: Uncharacterised protein family UPF0153; KEGG: cte:CT0872 hypothetical protein
YP_004627421.1	TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: lip:LI0024 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004627422.1	TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: sul:SYO3AOP1_0885 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase
YP_004627423.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: glo:Glov_3556 TonB-dependent receptor plug
YP_004627424.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tye:THEYE_A0446 oxidoreductase
YP_004627425.1	PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; Putative Fe-S cluster; Dihydropteroate synthase, DHPS; KEGG: dak:DaAHT2_0824 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel
YP_004627426.1	TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; KEGG: dak:DaAHT2_0825 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit
YP_004627427.1	PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; KEGG: dak:DaAHT2_0826 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel
YP_004627428.1	PFAM: Methylenetetrahydrofolate reductase; KEGG: adg:Adeg_0345 methylenetetrahydrofolate reductase
YP_004627429.1	KEGG: dal:Dalk_2780 hypothetical protein
YP_004627430.1	KEGG: adg:Adeg_0335 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane
YP_004627431.1	HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: dak:DaAHT2_0828 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004627432.1	HAMAP: Formate-tetrahydrofolate ligase, FTHFS; KEGG: dak:DaAHT2_0837 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS
YP_004627433.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: aae:aq_1069 UDP-glucose-4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004627434.1	KEGG: sat:SYN_02529 single-stranded DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_004627435.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: ddf:DEFDS_0159 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_004627436.1	KEGG: adg:Adeg_0900 formyl transferase domain protein
YP_004627437.1	KEGG: dbr:Deba_2428 tol-pal system protein YbgF
YP_004627438.1	PFAM: UspA; KEGG: dal:Dalk_0718 UspA domain protein
YP_004627439.1	PFAM: Isochorismatase-like; KEGG: ddf:DEFDS_1406 isochorismatase hydrolase
YP_004627440.1	KEGG: aae:aq_1056 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase putative; PFAM: Nicotinate phosphoribosyltransferase-like
YP_004627441.1	KEGG: dak:DaAHT2_1974 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_004627442.1	KEGG: dth:DICTH_0821 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004627443.1	KEGG: plu:plu1405 glucokinase; PFAM: Glucokinase
YP_004627444.1	PFAM: Outer membrane chaperone Skp (OmpH); KEGG: tye:THEYE_A0093 outer membrane protein, putative
YP_004627445.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tye:THEYE_A2098 peptidoglycan-associated lipoprotein
YP_004627446.1	KEGG: sfu:Sfum_1128 hypothetical protein
YP_004627447.1	PFAM: Prenyltransferase/squalene oxidase; KEGG: tba:TERMP_00468 hypothetical protein
YP_004627448.1	TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: cki:Calkr_1153 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core
YP_004627449.1	KEGG: drt:Dret_1504 hypothetical protein
YP_004627450.1	TIGRFAM: Hydrogenase maturation factor, HypF-type; HAMAP: Acylphosphatase; KEGG: tte:TTE0131 hydrogenase maturation factor; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type
YP_004627451.1	PFAM: Metallophosphoesterase; KEGG: hth:HTH_1454 metallophosphoesterase
YP_004627452.1	KEGG: hor:Hore_20970 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004627453.1	KEGG: dal:Dalk_3856 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627454.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: csc:Csac_2084 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: Flavoprotein; DNA/pantothenate metabolism flavoprotein, C-terminal
YP_004627455.1	KEGG: sfu:Sfum_0468 putative lipoprotein
YP_004627456.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Metal-dependent hydrolase HDOD; KEGG: ppd:Ppro_3373 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004627457.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: dol:Dole_0090 gamma-glutamyl phosphate reductase
YP_004627458.1	PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: tye:THEYE_A0791 nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_004627459.1	SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: cth:Cthe_0777 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, clamp
YP_004627460.1	KEGG: din:Selin_2214 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup
YP_004627461.1	PFAM: Uncharacterised conserved protein UCP016719; KEGG: sfu:Sfum_0535 hypothetical protein
YP_004627462.1	PFAM: Phosphoesterase, RecJ-like; KEGG: dak:DaAHT2_1369 phosphoesterase RecJ domain protein
YP_004627463.1	TIGRFAM: GTP-binding protein Obg/CgtA; Small GTP-binding protein; HAMAP: GTPase obg; KEGG: slp:Slip_0709 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_004627464.1	SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: dak:DaAHT2_1156 glutamate 5-kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase
YP_004627465.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dte:Dester_1146 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004627466.1	PFAM: Rubrerythrin; KEGG: tye:THEYE_A0129 methyltransferase
YP_004627467.1	PFAM: Organic solvent tolerance protein; KEGG: dps:DP3010 organic solvent tolerance protein (OstA)
YP_004627468.1	KEGG: dtu:Dtur_1306 protein of unknown function DUF163; HAMAP: Ribosomal RNA large subunit methyltransferase H; PFAM: SPOUT methyltransferase, predicted
YP_004627469.1	PFAM: Histone deacetylase superfamily; KEGG: sat:SYN_00740 histone deacetylase family protein
YP_004627470.1	PFAM: Secretion protein HlyD; KEGG: tye:THEYE_A1628 HlyD family secretion protein, putative
YP_004627471.1	PFAM: ABC transporter-like; KEGG: tye:THEYE_A1627 ABC transporter ATP-binding component; SMART: ATPase, AAA+ type, core
YP_004627472.1	PFAM: ABC-2 type transporter; KEGG: tye:THEYE_A1624 ATPase component ABC-type multidrug transport system
YP_004627473.1	PFAM: ABC-2 type transporter; KEGG: tye:THEYE_A1623 ABC-2 type transporter
YP_004627474.1	PFAM: Protein of unknown function DUF369; KEGG: tye:THEYE_A0257 hypothetical protein
YP_004627475.1	KEGG: afu:AF2264 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004627476.1	PFAM: Phosphoglycerate mutase; KEGG: clj:CLJU_c35540 alpha-ribazole phosphatase
YP_004627477.1	PFAM: Peptidase M48, Ste24p; KEGG: dol:Dole_1630 peptidase M48 Ste24p
YP_004627478.1	KEGG: dpr:Despr_2621 hypothetical protein
YP_004627479.1	PFAM: ATP-grasp fold, RimK-type; KEGG: dak:DaAHT2_2417 RimK domain protein ATP-grasp
YP_004627481.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: dte:Dester_0527 tryptophan synthase subunit beta
YP_004627482.1	PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: mja:MJ_1038 tryptophan synthase alpha subunit TrpA
YP_004627483.1	PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: dak:DaAHT2_0294 3-dehydroquinate synthase
YP_004627484.1	TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: dte:Dester_0439 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004627485.1	PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: tye:THEYE_A0933 dihydrodipicolinate synthase
YP_004627486.1	KEGG: tye:THEYE_A1984 NADH-dependent butanol dehydrogenase A; PFAM: Alcohol dehydrogenase, iron-type
YP_004627487.1	KEGG: dpr:Despr_1071 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004627488.1	KEGG: dte:Dester_0979 hypothetical protein
YP_004627489.1	KEGG: cch:Cag_0435 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004627490.1	KEGG: gmc:GY4MC1_1620 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004627491.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: saf:SULAZ_0401 PAS fold family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004627492.1	TIGRFAM: Protein of unknown function DUF198; KEGG: gur:Gura_4045 putative GTP cyclohydrolase; PFAM: Protein of unknown function DUF198
YP_004627493.1	KEGG: hth:HTH_0612 hypothetical protein
YP_004627494.1	KEGG: saf:SULAZ_0746 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_004627495.1	KEGG: hth:HTH_1006 hydrogenase expression/formation protein; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_004627496.1	PFAM: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: aae:aq_1021 hydrogenase accessory protein HypA
YP_004627497.1	KEGG: aae:aq_667 HupD hydrogenase related function; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein
YP_004627498.1	PFAM: UspA; KEGG: tye:THEYE_A0762 universal stress protein, putative
YP_004627499.1	PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A0738 hypothetical protein
YP_004627500.1	KEGG: tye:THEYE_A0737 hypothetical protein
YP_004627501.1	TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; KEGG: tit:Thit_1765 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal
YP_004627502.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Cystathionine beta-synthase, core; KEGG: pmx:PERMA_0493 response regulator PleD; SMART: Diguanylate cyclase, predicted; Cystathionine beta-synthase, core
YP_004627503.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: tal:Thal_0198 CMP/dCMP deaminase zinc-binding protein
YP_004627504.1	PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: dak:DaAHT2_1060 hydroxymethylbutenyl pyrophosphate reductase
YP_004627505.1	KEGG: dak:DaAHT2_1957 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like
YP_004627506.1	PFAM: Protein of unknown function DUF1239
YP_004627507.1	TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KEGG: tye:THEYE_A0223 bifunctional protein HldE; PFAM: Haloacid dehalogenase-like hydrolase
YP_004627508.1	PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: hya:HY04AAS1_1603 2-dehydro-3-deoxyphosphooctonate aldolase
YP_004627509.1	KEGG: sfu:Sfum_3475 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627510.1	KEGG: sin:YN1551_2288 hypothetical protein
YP_004627512.1	PFAM: Glycosyl transferase, group 1; KEGG: hth:HTH_0760 glycosyltransferase
YP_004627513.1	KEGG: hth:HTH_0761 hypothetical protein
YP_004627514.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; KEGG: hth:HTH_0762 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase
YP_004627515.1	KEGG: pmx:PERMA_1600 hypothetical protein; TIGRFAM: Protein of unknown function DUF77; PFAM: Protein of unknown function DUF77
YP_004627516.1	PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: tsc:TSC_c02740 argininosuccinate synthase
YP_004627517.1	TIGRFAM: Transaldolase C; HAMAP: transaldolase; KEGG: tam:Theam_1301 transaldolase; PFAM: Transaldolase
YP_004627518.1	KEGG: dsa:Desal_1306 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004627519.1	PFAM: Glycosyl transferase, family 39; KEGG: tye:THEYE_A0589 hypothetical protein
YP_004627520.1	TIGRFAM: DNA repair protein RadA; PFAM: DNA helicase, DnaB-like, C-terminal; KEGG: chy:CHY_2347 DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_004627521.1	PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_0616 hypothetical protein
YP_004627522.1	TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: dal:Dalk_2581 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis
YP_004627523.1	KEGG: ddf:DEFDS_1168 hypothetical protein; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004627524.1	KEGG: nam:NAMH_0804 NAD-dependent deacetylase; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2
YP_004627525.1	PFAM: Divalent ion tolerance protein, CutA1; KEGG: das:Daes_1411 CutA1 divalent ion tolerance protein
YP_004627526.1	KEGG: tye:THEYE_A0361 molybdenum cofactor biosynthesis protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_004627527.1	PFAM: Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; manually curated; KEGG: tye:THEYE_A0891 formate dehydrogenase, alpha subunit, selenocysteine-containing; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence
YP_004627528.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A0893 nitrate-inducible formate dehydrogenase, beta subunit
YP_004627529.1	PFAM: Formate dehydrogenase accessory protein; KEGG: tye:THEYE_A1302 formate dehydrogenase accessory protein FdhE, putative
YP_004627530.1	KEGG: tye:THEYE_A1301 molybdenum cofactor biosynthesis protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_004627531.1	KEGG: paa:Paes_1471 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related
YP_004627532.1	PFAM: Tetratricopeptide TPR-1; KEGG: mar:MAE_03780 TPR repeat-containing protein
YP_004627533.1	TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: bld:BLi04084 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004627535.1	KEGG: tye:THEYE_A1135 hypothetical protein
YP_004627536.1	TIGRFAM: FO synthase, subunit 2; PFAM: Radical SAM; KEGG: tam:Theam_0970 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004627537.1	PFAM: Glycosyl transferase, family 2; KEGG: app:CAP2UW1_3097 family 2 glycosyl transferase
YP_004627538.1	KEGG: pca:Pcar_1265 putative LPS biosynthesis enzyme
YP_004627539.1	KEGG: pvi:Cvib_0642 hypothetical protein
YP_004627540.1	PFAM: Glycosyl transferase, group 1; KEGG: tte:TTE0949 glycosyltransferase
YP_004627541.1	PFAM: O-antigen ligase-related; KEGG: cni:Calni_1077 O-antigen polymerase
YP_004627542.1	PFAM: Glycosyl transferase, group 1; KEGG: tye:THEYE_A1549 WabG
YP_004627544.1	PFAM: Glycosyl transferase, family 39; KEGG: dte:Dester_0129 glycosyl transferase family 39
YP_004627545.1	KEGG: dth:DICTH_1499 hypothetical protein
YP_004627546.1	PFAM: ATP-grasp fold, RimK-type; KEGG: dol:Dole_1115 RimK domain-containing protein ATP-grasp
YP_004627547.1	TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; PFAM: Radical SAM; Methylthiotransferase, N-terminal; KEGG: geo:Geob_1978 MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB
YP_004627548.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dte:Dester_1112 CDP-alcohol phosphatidyltransferase
YP_004627549.1	PFAM: Protein of unknown function DUF208; KEGG: ddf:DEFDS_1431 hypothetical protein
YP_004627550.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: mfe:Mefer_1075 molybdopterin biosynthesis MoaE protein
YP_004627551.1	KEGG: saf:SULAZ_1414 M penetrans paralogue family 2
YP_004627552.1	PFAM: Ferric-uptake regulator; KEGG: pmx:PERMA_1658 transcriptional regulator
YP_004627553.1	PFAM: Ferrous iron transporter, FeoA subunit; KEGG: hth:HTH_0317 ferrous iron transport protein A
YP_004627554.1	PFAM: Phosphoribosyltransferase; Type IV pilus assembly PilZ; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: tal:Thal_1476 orotate phosphoribosyltransferase
YP_004627555.1	KEGG: tye:THEYE_A1778 phosphate ABC transporter, phosphate-binding protein PstS; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004627556.1	KEGG: hth:HTH_1710 ABC-type phosphate transport system permease protein; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004627557.1	KEGG: hth:HTH_1711 ABC-type phosphate transport system permease protein; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004627558.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: tal:Thal_0204 phosphate ABC transporter ATPase; PFAM: ABC transporter-like
YP_004627559.1	PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: tye:THEYE_A1523 arginine biosynthesis bifunctional protein ArgJ
YP_004627560.1	TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: sat:SYN_01984 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase
YP_004627562.1	TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: toc:Toce_1233 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase
YP_004627563.1	TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: dak:DaAHT2_0900 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004627564.1	manually curated
YP_004627565.1	KEGG: dps:DP2496 hypothetical protein
YP_004627566.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: sfu:Sfum_3253 flavodoxin/nitric oxide synthase
YP_004627567.1	KEGG: sat:SYN_00675 putative cytoplasmic protein
YP_004627568.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmo:Pmob_1630 rubredoxin-type Fe(Cys)4 protein
YP_004627569.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tna:CTN_1927 rubredoxin-type Fe(Cys)4 protein
YP_004627570.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tye:THEYE_A1651 rubredoxin
YP_004627571.1	KEGG: dma:DMR_17610 desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx
YP_004627572.1	SMART: HTH transcriptional regulator, MerR; KEGG: gpb:HDN1F_10630 transcriptional regulator, MerR family
YP_004627573.1	KEGG: ank:AnaeK_1909 integration host factor subunit alpha; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004627574.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: chy:CHY_1570 phenylalanyl-tRNA synthetase subunit beta
YP_004627575.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: dte:Dester_0632 phenylalanyl-tRNA synthetase alpha chain; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_004627576.1	TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: adg:Adeg_0536 ribosomal protein L20; PFAM: Ribosomal protein L20
YP_004627577.1	TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: tye:THEYE_A1227 50S ribosomal protein L35; PFAM: Ribosomal protein L35
YP_004627578.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: adg:Adeg_1877 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_004627579.1	SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: tye:THEYE_A0876 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal
YP_004627580.1	KEGG: tye:THEYE_A0904 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004627581.1	KEGG: dal:Dalk_2369 hydroxylamine oxidase
YP_004627583.1	KEGG: tye:THEYE_A0721 hypothetical protein
YP_004627584.1	TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; Small GTP-binding protein; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: sul:SYO3AOP1_0320 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004627585.1	KEGG: deb:DehaBAV1_1373 beta-lactamase domain-containing protein
YP_004627586.1	HAMAP: peroxiredoxin; KEGG: aae:aq_858 alkyl hydroperoxide reductase; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal
YP_004627587.1	KEGG: atm:ANT_26280 hypothetical protein
YP_004627588.1	PFAM: Carbohydrate/purine kinase; KEGG: apo:Arcpr_0268 PfkB domain protein
YP_004627589.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: tye:THEYE_A0931 protein TldD
YP_004627590.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: dak:DaAHT2_1636 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase
YP_004627591.1	KEGG: ddf:DEFDS_1642 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; Carboxylyase-related; PFAM: Carboxylyase-related
YP_004627592.1	KEGG: dak:DaAHT2_0278 phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase
YP_004627593.1	TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: geo:Geob_2401 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding
YP_004627594.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: dte:Dester_1105 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat
YP_004627595.1	KEGG: sfu:Sfum_0537 type IV pilus assembly protein PilM
YP_004627597.1	KEGG: cow:Calow_1934 dynamin family protein
YP_004627598.1	PFAM: HAMP linker domain; KEGG: tye:THEYE_A0904 methyl-accepting chemotaxis protein
YP_004627599.1	KEGG: ddf:DEFDS_P063 methyl-accepting chemotaxis protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif
YP_004627602.1	KEGG: sat:SYN_02176 Fe-S oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627603.1	KEGG: gur:Gura_4290 ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase
YP_004627604.1	PFAM: Major facilitator superfamily MFS-1; KEGG: tye:THEYE_A1335 protein AmpG
YP_004627605.1	PFAM: Isochorismatase-like; KEGG: tye:THEYE_A0610 isochorismatase family protein
YP_004627606.1	TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: nam:NAMH_0946 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain III, C-terminal
YP_004627607.1	KEGG: vpr:Vpar_0590 crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; PFAM: Mitochondrial resolvase Ydc2, catalytic
YP_004627608.1	TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: adg:Adeg_1634 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28
YP_004627609.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: dpr:Despr_3284 hypothetical protein
YP_004627610.1	KEGG: tba:TERMP_01423 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004627611.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dak:DaAHT2_0262 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004627612.1	TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; KEGG: dak:DaAHT2_0261 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004627613.1	KEGG: dak:DaAHT2_0260 hypothetical protein
YP_004627614.1	PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: dak:DaAHT2_1355 ATP phosphoribosyltransferase
YP_004627615.1	HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: sat:SYN_03110 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004627616.1	KEGG: nsa:Nitsa_0802 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004627617.1	TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: tme:Tmel_1628 50S ribosomal protein L34; PFAM: Ribosomal protein L34
YP_004627618.1	TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: tma:TM1463 ribonuclease P protein component; PFAM: Ribonuclease P
YP_004627619.1	TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: chy:CHY_0003 hypothetical protein; PFAM: Protein of unknown function DUF37
YP_004627620.1	TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal; HAMAP: Membrane protein oxaA; KEGG: dps:DP0855 hypothetical protein; PFAM: Membrane insertion protein, OxaA/YidC
YP_004627621.1	KEGG: slp:Slip_2381 single-stranded nucleic acid binding R3H domain protein
YP_004627622.1	TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: tmt:Tmath_2282 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_004627623.1	KEGG: tam:Theam_0093 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal
YP_004627624.1	KEGG: aae:aq_1925 N-methylhydantoinase B; PFAM: Hydantoinase B/oxoprolinase
YP_004627625.1	KEGG: aae:aq_1960 HMP-P kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004627626.1	TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: tte:TTE0606 aspartyl/glutamyl-tRNA amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit
YP_004627627.1	PFAM: Amidase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: dte:Dester_0487 glutamyl-tRNA(Gln) amidotransferase subunit A
YP_004627628.1	TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KorB; KEGG: tye:THEYE_A1991 stage 0 sporulation protein J; SMART: ParB-like nuclease
YP_004627629.1	PFAM: Glycosyl transferase, group 1; KEGG: nwa:Nwat_1578 glycosyl transferase group 1
YP_004627630.1	PFAM: Bacterial alpha-L-rhamnosidase; KEGG: nde:NIDE3191 putative amylo-alpha-1,6-glucosidase
YP_004627631.1	KEGG: dsa:Desal_3394 hypothetical protein
YP_004627632.1	KEGG: tye:THEYE_A0581 glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependentdihydroxyacetone-phosphate reductase); HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
YP_004627633.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sat:SYN_00608 oligopeptide-binding protein
YP_004627634.1	PFAM: Protein of unknown function DUF2495; KEGG: hth:HTH_0312 hypothetical protein
YP_004627635.1	KEGG: sfu:Sfum_2529 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX
YP_004627636.1	KEGG: dak:DaAHT2_1904 competence/damage-inducible protein CinA; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding
YP_004627637.1	PFAM: Phosphatidylglycerophosphatase A; KEGG: ppn:Palpr_2418 phosphatidylglycerophosphatase A
YP_004627639.1	PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_2593 hypothetical protein
YP_004627640.1	PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; KEGG: tye:THEYE_A0825 potassium uptake protein, TrkA family
YP_004627641.1	PFAM: UspA; KEGG: tye:THEYE_A0732 universal stress protein family
YP_004627642.1	PFAM: Divalent ion symporter; KEGG: tye:THEYE_A0731 arsenical pump membrane protein
YP_004627643.1	PFAM: Glycosyl transferase, family 2; KEGG: nis:NIS_0674 glycosyl transferase
YP_004627644.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: gur:Gura_1869 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004627645.1	PFAM: Prephenate dehydrogenase; KEGG: mmx:MmarC6_1158 prephenate dehydrogenase
YP_004627646.1	TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: tye:THEYE_A0186 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_004627647.1	SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: rxy:Rxyl_2676 DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004627649.1	KEGG: tam:Theam_1682 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1
YP_004627650.1	PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: dbr:Deba_0937 S-adenosylmethionine synthetase
YP_004627651.1	PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: aae:aq_1180 S-adenosyl-L-homocysteine hydrolase
YP_004627652.1	TIGRFAM: Lumazine-binding protein; KEGG: adg:Adeg_1981 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004627653.1	PFAM: Beta-lactamase-related; KEGG: dal:Dalk_3805 beta-lactamase
YP_004627654.1	TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: cyt:cce_2615 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_004627655.1	PFAM: Phosphate transporter; KEGG: tye:THEYE_A1362 sodium/phosphate symporter
YP_004627656.1	KEGG: tye:THEYE_A1361 hypothetical protein; TIGRFAM: Protein of unknown function DUF47; PFAM: Putitive phosphate transport regulator
YP_004627657.1	KEGG: tye:THEYE_A1360 CBS domain protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004627658.1	PFAM: Inositol monophosphatase; NUDIX hydrolase domain; KEGG: dak:DaAHT2_0139 inositol monophosphatase
YP_004627659.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dak:DaAHT2_1538 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004627660.1	PFAM: Ribonuclease II/R; KEGG: dak:DaAHT2_0510 exoribonuclease II
YP_004627661.1	PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: clj:CLJU_c11710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
YP_004627662.1	KEGG: sat:SYN_00762 hypothetical protein
YP_004627663.1	KEGG: tye:THEYE_A1654 acetyl-CoA synthetase; TIGRFAM: Acetyl coenzyme A synthetase (ADP forming), alpha domain; PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type
YP_004627664.1	PFAM: DRTGG; KEGG: tye:THEYE_A1655 cobyrinic acid a,c-diamide synthase family protein, putative
YP_004627665.1	HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; KEGG: sfu:Sfum_2961 amidohydrolase; PFAM: Amidohydrolase 1
YP_004627666.1	KEGG: reh:H16_A1616 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004627667.1	KEGG: tye:THEYE_A1984 NADH-dependent butanol dehydrogenase A; PFAM: Alcohol dehydrogenase, iron-type
YP_004627668.1	KEGG: saf:SULAZ_1655 glyoxylate reductase (glycolate reductase); PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004627669.1	TIGRFAM: Riboflavin-specific deaminase, C-terminal; KEGG: tal:Thal_0895 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)p yrimidine1-reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal
YP_004627670.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: hth:HTH_1631 CDP-alcohol phosphatidyltransferase
YP_004627671.1	KEGG: tye:THEYE_A1804 hypothetical protein
YP_004627672.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tye:THEYE_A0116 transcriptional regulator, TetR family
YP_004627673.1	KEGG: tye:THEYE_A0784 indolepyruvate oxidoreductase subunit IorA; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004627674.1	PFAM: Amino acid-binding ACT; KEGG: tye:THEYE_A0783 ACT domain protein
YP_004627675.1	KEGG: tye:THEYE_A0782 aerobic phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004627676.1	PFAM: Amino acid-binding ACT; KEGG: tye:THEYE_A0781 acetolactate synthase small subunit
YP_004627677.1	KEGG: tye:THEYE_A0780 PaaF; PFAM: AMP-dependent synthetase/ligase
YP_004627678.1	KEGG: tye:THEYE_A0779 indolepyruvate oxidoreductase subunit IorB; PFAM: Pyruvate/ketoisovalerate oxidoreductase
YP_004627679.1	PFAM: L-lactate permease; KEGG: tye:THEYE_A1556 L-lactate permease, putative
YP_004627680.1	KEGG: dal:Dalk_1639 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004627681.1	PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: saf:SULAZ_1707 tetratricopeptide TPR_2 repeat protein
YP_004627682.1	KEGG: dak:DaAHT2_1673 heat repeat-containing PBS lyase
YP_004627683.1	KEGG: dps:DP1095 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat
YP_004627684.1	KEGG: toc:Toce_1340 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like
YP_004627685.1	SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: aae:aq_1816 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase
YP_004627686.1	KEGG: dps:DP2813 hypothetical protein; PFAM: Radical SAM; Protein of unknown function DUF2344; SMART: Elongator protein 3/MiaB/NifB
YP_004627687.1	KEGG: pas:Pars_0947 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Major facilitator superfamily MFS-1; SMART: Cystathionine beta-synthase, core
YP_004627688.1	PFAM: Uncharacterised conserved protein UCP033563; KEGG: ddf:DEFDS_0114 hypothetical protein
YP_004627689.1	KEGG: sfu:Sfum_2771 hypothetical protein
YP_004627690.1	KEGG: pmx:PERMA_0403 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase
YP_004627691.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: mmq:MmarC5_0403 class II aldolase/adducin family protein
YP_004627692.1	PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: aar:Acear_0548 glutamate-1-semialdehyde 2,1-aminomutase
YP_004627693.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: dvm:DvMF_0155 ketol-acid reductoisomerase
YP_004627694.1	KEGG: tye:THEYE_A1803 hypothetical protein
YP_004627695.1	KEGG: tye:THEYE_A1802 SasR; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004627696.1	KEGG: tye:THEYE_A1801 sensor protein AtoS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004627697.1	KEGG: tye:THEYE_A1814 lipid A 1-phosphatase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004627698.1	KEGG: dau:Daud_1123 hypothetical protein
YP_004627699.1	TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: tye:THEYE_A0459 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004627700.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: drt:Dret_0089 pyruvate/ketoisovalerate oxidoreductase
YP_004627701.1	KEGG: chy:CHY_1971 putative keto/oxoacid ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004627702.1	KEGG: dbr:Deba_1953 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal
YP_004627703.1	KEGG: fno:Fnod_0110 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; manually curated; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004627704.1	TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: dal:Dalk_3440 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_004627705.1	KEGG: nth:Nther_2750 glycine cleavage system H protein; HAMAP: Glycine cleavage H-protein; PFAM: Glycine cleavage H-protein
YP_004627706.1	PFAM: Type III secretion exporter; KEGG: dte:Dester_0573 type III secretion exporter
YP_004627707.1	PFAM: Fructose-1,6-bisphosphatase, class V; KEGG: hth:HTH_0340 putative fructose 1,6-bisphosphatase
YP_004627708.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dat:HRM2_42430 hypothetical protein
YP_004627709.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dpr:Despr_2187 cell division and transport-associated protein TolR
YP_004627710.1	KEGG: dsa:Desal_2479 protein TolA
YP_004627711.1	KEGG: mgm:Mmc1_0698 L-aspartate aminotransferase; PFAM: Aminotransferase, class I/II
YP_004627712.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: tal:Thal_0566 17 kDa surface antigen
YP_004627713.1	PFAM: SNARE associated Golgi protein; KEGG: abu:Abu_2024 hypothetical protein
YP_004627714.1	PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: sat:SYN_00884 outer membrane lipoprotein carrier protein
YP_004627715.1	TIGRFAM: DnaD/phage-associated region; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: sat:SYN_01274 cell division protein; SMART: ATPase, AAA+ type, core
YP_004627716.1	KEGG: dau:Daud_1896 hypothetical protein
YP_004627717.1	KEGG: pca:Pcar_1176 hypothetical protein; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain
YP_004627718.1	KEGG: tye:THEYE_A1229 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding
YP_004627719.1	TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: tal:Thal_0680 translation initiation factor IF-3; PFAM: Translation initiation factor 3, N-terminal; Translation initiation factor 3, C-terminal
YP_004627720.1	TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: dal:Dalk_3651 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004627721.1	KEGG: dak:DaAHT2_0853 hypothetical protein
YP_004627722.1	KEGG: cbd:CBUD_0982 segregation and condensation protein; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_004627723.1	KEGG: dte:Dester_0674 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004627724.1	KEGG: plt:Plut_0448 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004627725.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: drm:Dred_1716 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_004627727.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: ddf:DEFDS_0213 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004627728.1	TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: aae:aq_894 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004627729.1	PFAM: Major facilitator superfamily MFS-1; KEGG: cni:Calni_1952 major facilitator superfamily mfs_1
YP_004627730.1	KEGG: dak:DaAHT2_2010 hypothetical protein
YP_004627731.1	TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: hth:HTH_0512 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004627733.1	KEGG: kol:Kole_0530 anaerobic ribonucleoside triphosphate reductase
YP_004627734.1	TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; Intein splicing site; PFAM: ATP-cone; KEGG: cow:Calow_0403 anaerobic ribonucleoside-triphosphate reductase; SMART: Hedgehog/intein hint, N-terminal
YP_004627735.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: tmr:Tmar_0957 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: ATPase, AAA+ type, core
YP_004627736.1	TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: cth:Cthe_0769 30S ribosomal protein S16; PFAM: Ribosomal protein S16
YP_004627737.1	HAMAP: Uncharacterised protein family UPF0109, bacterial; KEGG: dba:Dbac_3306 RNA-binding protein (KH domain)
YP_004627738.1	TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: tme:Tmel_1803 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_004627739.1	PFAM: Protein of unknown function DUF2168; tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: ddf:DEFDS_0251 tRNA (guanine-N(1)-)-methyltransferase
YP_004627740.1	PFAM: Heavy metal transport/detoxification protein; KEGG: aae:aq_1840a copper chaperone
YP_004627741.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tna:CTN_0351 cation-transporting ATPase, P-type; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004627742.1	KEGG: rca:Rcas_2955 carbamoyl-phosphate synthase L chain ATP-binding; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal
YP_004627743.1	KEGG: rca:Rcas_2954 biotin/lipoyl attachment domain-containing protein; PFAM: Biotin/lipoyl attachment; Conserved carboxylase region; Pyruvate carboxyltransferase
YP_004627744.1	PFAM: Curli production assembly/transport component CsgG; KEGG: aae:aq_1148 hypothetical protein
YP_004627745.1	KEGG: tnp:Tnap_1357 ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_004627746.1	PFAM: Ribosomal protein S9; KEGG: ckn:Calkro_0588 30S ribosomal protein S9
YP_004627747.1	PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: tye:THEYE_A1632 N-acetyl-gamma-glutamyl-phosphate reductase
YP_004627748.1	TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: sat:SYN_01395 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004627749.1	HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: mgm:Mmc1_2938 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004627750.1	PFAM: Colicin V production protein; KEGG: chl:Chy400_1054 colicin V production protein
YP_004627751.1	TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: tye:THEYE_A1975 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR
YP_004627752.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dol:Dole_1488 cobyrinic acid ac-diamide synthase
YP_004627753.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; KEGG: sfu:Sfum_2174 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase
YP_004627754.1	KEGG: tye:THEYE_A1522 asparate kinase, monofunctional class; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT
YP_004627755.1	KEGG: dpr:Despr_3248 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004627756.1	PFAM: Outer membrane lipoprotein Slp; KEGG: tye:THEYE_A2084 outer membrane lipoprotein Slp family
YP_004627757.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_1672 TonB-dependent receptor
YP_004627758.1	PFAM: Tetrapyrrole methylase; KEGG: ppd:Ppro_1250 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_004627759.1	PFAM: Amino acid permease-associated region; KEGG: ppd:Ppro_1252 amino acid permease-associated region
YP_004627760.1	KEGG: oan:Oant_4175 hypothetical protein
YP_004627761.1	KEGG: ppd:Ppro_1247 hypothetical protein
YP_004627763.1	PFAM: ABC transporter-like; KEGG: tye:THEYE_A1646 ABC-type multidrug transport system, ATPase component; SMART: ATPase, AAA+ type, core
YP_004627764.1	PFAM: ABC-2 type transporter; KEGG: tye:THEYE_A1645 ABC-2 type transporter superfamily
YP_004627765.1	TIGRFAM: AMMECR1; HAMAP: AMMECR1-domain protein; KEGG: sta:STHERM_c03350 hypothetical protein; PFAM: AMMECR1
YP_004627766.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; Glutaredoxin; KEGG: hth:HTH_1351 thiol:disulfide interchange protein
YP_004627767.1	PFAM: Nitroreductase-like; KEGG: dak:DaAHT2_0557 nitroreductase
YP_004627768.1	PFAM: NADPH-dependent FMN reductase; KEGG: iho:Igni_0620 NADPH-dependent FMN reductase
YP_004627769.1	HAMAP: Spermidine synthase; KEGG: tbo:Thebr_1171 spermidine synthase; PFAM: Spermine synthase
YP_004627770.1	KEGG: dak:DaAHT2_1329 chaperone DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004627771.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: ter:Tery_2084 CMP/dCMP deaminase, zinc-binding
YP_004627772.1	KEGG: dtu:Dtur_0810 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004627773.1	PFAM: Glycosyl transferase, family 2; KEGG: saf:SULAZ_0943 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase)
YP_004627774.1	KEGG: hya:HY04AAS1_0581 hypothetical protein
YP_004627775.1	PFAM: HAD superfamily hydrolase-like, type 3; KEGG: dat:HRM2_42590 AhpF
YP_004627777.1	KEGG: tam:Theam_0252 ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23
YP_004627778.1	KEGG: dte:Dester_0190 ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_004627779.1	KEGG: dte:Dester_0191 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004627780.1	KEGG: toc:Toce_2107 translation elongation factor 1A (EF-1A/EF-Tu); TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004627781.1	TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: dbr:Deba_2939 ribosomal protein S10; PFAM: Ribosomal protein S10
YP_004627782.1	KEGG: dat:HRM2_36260 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_004627783.1	PFAM: Ribosomal protein L4/L1e; KEGG: tam:Theam_0258 ribosomal protein L4/L1e
YP_004627784.1	PFAM: Ribosomal protein L25/L23; KEGG: sta:STHERM_c04980 50S ribosomal protein L23
YP_004627785.1	KEGG: hor:Hore_01200 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2
YP_004627786.1	KEGG: ddf:DEFDS_1768 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_004627787.1	KEGG: tna:CTN_0998 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_004627788.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: dbr:Deba_2932 ribosomal protein S3; SMART: K Homology
YP_004627789.1	TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: tbo:Thebr_0391 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004627790.1	KEGG: nth:Nther_0202 LSU ribosomal protein L29P; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_004627791.1	KEGG: tmr:Tmar_2286 30S ribosomal protein S17P; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_004627792.1	KEGG: ppd:Ppro_0690 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_004627793.1	TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: chy:CHY_2298 50S ribosomal protein L24; SMART: KOW
YP_004627794.1	PFAM: Ribosomal protein L5; KEGG: gwc:GWCH70_0123 50S ribosomal protein L5
YP_004627795.1	PFAM: Ribosomal protein S14; KEGG: dte:Dester_0207 ribosomal protein S14
YP_004627796.1	PFAM: Ribosomal protein S8; KEGG: aac:Aaci_2697 ribosomal protein S8
YP_004627797.1	KEGG: ddf:DEFDS_1757 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004627798.1	KEGG: tnp:Tnap_1325 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_004627799.1	KEGG: bha:BH0151 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal
YP_004627800.1	KEGG: tme:Tmel_0971 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region
YP_004627801.1	KEGG: tna:CTN_1012 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15
YP_004627802.1	KEGG: dat:HRM2_36060 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein
YP_004627803.1	TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: afu:AF0676 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region
YP_004627804.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: has:Halsa_1900 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain
YP_004627805.1	TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: bse:Bsel_0138 translation initiation factor IF-1; PFAM: S1, IF1 type
YP_004627806.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: tam:Theam_0281 ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004627807.1	KEGG: tte:TTE2266 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_004627808.1	KEGG: adg:Adeg_1498 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11
YP_004627809.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: gbm:Gbem_0959 30S ribosomal protein S4; SMART: RNA-binding S4
YP_004627810.1	SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: csc:Csac_2259 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal
YP_004627811.1	TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: ppd:Ppro_0707 50S ribosomal protein L17; PFAM: Ribosomal protein L17
YP_004627812.1	KEGG: dpr:Despr_0671 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_004627813.1	TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: ddf:DEFDS_0192 trigger factor; PFAM: Trigger factor, C-terminal, bacterial; Trigger factor, ribosome-binding, bacterial
YP_004627814.1	PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: tam:Theam_0136 ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004627815.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: sfu:Sfum_0099 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal
YP_004627816.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: sfu:Sfum_0098 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_004627817.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; KEGG: dps:DP2728 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core
YP_004627818.1	KEGG: dol:Dole_2996 AsnC family transcriptional regulator
YP_004627819.1	PFAM: Glycosyl transferase, family 39; KEGG: hth:HTH_0673 glycosyltransferase, family 39
YP_004627821.1	KEGG: dps:DP2822 Ntr two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004627822.1	TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: tte:TTE0874 DNA polymerase I; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2
YP_004627823.1	TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: pmx:PERMA_0135 30S ribosomal protein S21; PFAM: Ribosomal protein S21
YP_004627824.1	HAMAP: MutS2 protein; PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair protein MutS, C-terminal; KEGG: sul:SYO3AOP1_1568 MutS2 family protein; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal
YP_004627825.1	KEGG: bha:BH1375 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain
YP_004627826.1	KEGG: lbf:LBF_1515 DNA-directed RNA polymerase sigma sigma70/sigma32 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004627827.1	KEGG: tdn:Suden_1976 AsnC family transcriptional regulator
YP_004627828.1	PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A0940 hypothetical protein
YP_004627829.1	KEGG: aae:aq_972 hypothetical protein; PFAM: Peptidase M48, Ste24p; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; RNA-processing protein, HAT helix
YP_004627830.1	KEGG: afu:AF1002 hypothetical protein; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase
YP_004627831.1	KEGG: sul:SYO3AOP1_1428 hypothetical protein
YP_004627832.1	KEGG: sul:SYO3AOP1_1427 hypothetical protein
YP_004627833.1	KEGG: sul:SYO3AOP1_1426 hypothetical protein
YP_004627834.1	KEGG: sul:SYO3AOP1_1425 hypothetical protein
YP_004627835.1	KEGG: sul:SYO3AOP1_1424 hypothetical protein
YP_004627836.1	KEGG: sul:SYO3AOP1_1421 hypothetical protein
YP_004627837.1	KEGG: sul:SYO3AOP1_1420 hypothetical protein
YP_004627838.1	KEGG: sul:SYO3AOP1_1419 hypothetical protein
YP_004627839.1	KEGG: sul:SYO3AOP1_1418 hypothetical protein
YP_004627840.1	KEGG: sul:SYO3AOP1_1417 proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin
YP_004627841.1	KEGG: tye:THEYE_A1914 hypothetical protein
YP_004627842.1	KEGG: sul:SYO3AOP1_1421 hypothetical protein
YP_004627843.1	KEGG: sul:SYO3AOP1_1414 hypothetical protein
YP_004627844.1	KEGG: tva:TVAG_199400 viral A-type inclusion protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF
YP_004627846.1	KEGG: plt:Plut_0316 hypothetical protein
YP_004627847.1	PFAM: Protein of unknown function DUF218; KEGG: lbf:LBF_0703 hypothetical protein
YP_004627848.1	HAMAP: Phosphoheptose isomerase; KEGG: mfs:MFS40622_0411 phosphoheptose isomerase
YP_004627849.1	PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: gur:Gura_2310 putative DNA-binding/iron metalloprotein/AP endonuclease
YP_004627850.1	KEGG: sat:SYN_02713 response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004627851.1	PFAM: BioY protein; TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cts:Ctha_0981 TonB-dependent receptor
YP_004627852.1	KEGG: sfu:Sfum_0720 S-adenosylmethionine decarboxylase-like protein; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal
YP_004627853.1	TIGRFAM: Putative agmatinase; KEGG: dth:DICTH_1308 agmatinase, putative; PFAM: Ureohydrolase
YP_004627854.1	KEGG: drt:Dret_2009 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_004627855.1	PFAM: Cysteine-rich region, CCG; KEGG: tye:THEYE_A0169 anaerobic glycerol-3-phosphate dehydrogenase, subunit C, putative
YP_004627856.1	PFAM: Radical SAM; KEGG: tye:THEYE_A0358 radical SAM domain protein
YP_004627857.1	PFAM: Metallophosphoesterase; KEGG: dol:Dole_0345 metallophosphoesterase
YP_004627859.1	TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; KEGG: toc:Toce_1271 tyrosine recombinase XerD subunit; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004627860.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: dtu:Dtur_1497 CBS domain containing protein
YP_004627861.1	PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tth:TTC1824 30S ribosomal protein S1
YP_004627862.1	KEGG: gur:Gura_2285 signal peptide peptidase SppA, 36K type; TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49
YP_004627863.1	KEGG: ddf:DEFDS_1930 phosphatase Ppx/GppA family; PFAM: Ppx/GppA phosphatase; Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004627864.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: tye:THEYE_A0206 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_004627865.1	PFAM: Type II secretion system F domain; KEGG: gbm:Gbem_2593 type IV pilus biogenesis protein PilC
YP_004627866.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: afl:Aflv_1374 metal ion transporter
YP_004627867.1	TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: geo:Geob_0603 undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_004627868.1	PFAM: Methyltransferase-16, putative; KEGG: dpr:Despr_2610 methyltransferase-16, putative
YP_004627869.1	KEGG: saf:SULAZ_1038 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small
YP_004627870.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: toc:Toce_2016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_004627871.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: aar:Acear_0044 DNA polymerase III subunit delta'
YP_004627872.1	KEGG: smt:Smal_3176 fimbrial protein pilin
YP_004627873.1	KEGG: she:Shewmr4_0422 methylation site containing protein
YP_004627874.1	KEGG: nis:NIS_0655 hypothetical protein
YP_004627875.1	KEGG: sat:SYN_01357 putative cytoplasmic protein
YP_004627876.1	TIGRFAM: Cofactor-independent phosphoglycerate mutase, archaeal; KEGG: aae:aq_542 cofactor-independent phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme
YP_004627877.1	KEGG: hth:HTH_1678 biopolymer transport protein; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel
YP_004627878.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hth:HTH_1677 biopolymer transport protein
YP_004627879.1	KEGG: hth:HTH_0241 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_004627880.1	PFAM: Protein of unknown function, CGGC domain; KEGG: tye:THEYE_A1863 hypothetical protein
YP_004627881.1	KEGG: tye:THEYE_A0530 hypothetical protein
YP_004627882.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: pai:PAE2058 hypothetical protein
YP_004627883.1	KEGG: tye:THEYE_A0140 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51
YP_004627884.1	KEGG: sto:ST1739 hypothetical protein
YP_004627885.1	PFAM: ATP dependent DNA ligase, central; KEGG: tbo:Thebr_0487 DNA polymerase LigD, ligase domain-containing protein
YP_004627886.1	KEGG: tye:THEYE_A0630 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004627887.1	TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; KEGG: gsu:GSU2063 HD domain-containing protein; SMART: Metal-dependent phosphohydrolase, HD region
YP_004627888.1	PFAM: Protein of unknown function DUF1284; KEGG: tye:THEYE_A0527 hypothetical protein
YP_004627889.1	PFAM: Protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: tye:THEYE_A1162 hypothetical protein
YP_004627890.1	PFAM: Metallophosphoesterase; KEGG: abi:Aboo_1037 metallophosphoesterase
YP_004627891.1	KEGG: abi:Aboo_1036 hypothetical protein
YP_004627892.1	KEGG: cts:Ctha_0439 TPR repeat-containing protein
YP_004627893.1	KEGG: mtp:Mthe_0628 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004627895.1	PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: sul:SYO3AOP1_1523 ATPase associated with various cellular activities AAA_3
YP_004627896.1	KEGG: saf:SULAZ_0020 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF58
YP_004627897.1	KEGG: pmx:PERMA_1111 transglutaminase domain protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_004627898.1	KEGG: mmb:Mmol_0710 peptidase M48 Ste24p; PFAM: Peptidase M48, Ste24p; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF
YP_004627899.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: apo:Arcpr_0800 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_004627900.1	KEGG: sfu:Sfum_1297 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004627901.1	PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: aae:aq_257 RNA methyltransferase
YP_004627902.1	KEGG: tye:THEYE_A0388 (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein; TIGRFAM: CoA enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; Protein of unknown function DUF2229, CoA enzyme activase
YP_004627903.1	KEGG: tye:THEYE_A0149 hypothetical protein
YP_004627905.1	TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: dps:DP0815 ATP synthase, A chain; PFAM: ATPase, F0 complex, subunit A
YP_004627906.1	TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: dds:Ddes_2255 ATP synthase F0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C
YP_004627907.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: tmt:Tmath_1299 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core
YP_004627908.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: atm:ANT_09900 putative phosphatidylinositol synthase
YP_004627909.1	KEGG: hth:HTH_1813 hydrogenase assembly chaperone; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC
YP_004627910.1	KEGG: hth:HTH_1814 hydrogenase expression/formation protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein
YP_004627911.1	KEGG: dte:Dester_0454 cytochrome-c3 hydrogenase; PFAM: Nickel-dependent hydrogenase, large subunit
YP_004627912.1	TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: dte:Dester_0453 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
YP_004627913.1	KEGG: iag:Igag_1482 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal; Aldehyde ferredoxin oxidoreductase, C-terminal; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal
YP_004627914.1	KEGG: tye:THEYE_A0200 heavy metal resistance transcription regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004627915.1	PFAM: Protein of unknown function DUF318, transmembrane; KEGG: afu:AF2247 hypothetical protein
YP_004627916.1	TIGRFAM: Redox-active disulphide protein 2; KEGG: apo:Arcpr_0666 redox-active disulfide protein 2
YP_004627917.1	PFAM: Formylmethanofuran dehydrogenase, subunit E region; KEGG: sun:SUN_1417 hypothetical protein
YP_004627918.1	PFAM: Protein of unknown function DUF81; KEGG: rrs:RoseRS_2089 hypothetical protein
YP_004627919.1	KEGG: tye:THEYE_A1110 phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative; manually curated; TIGRFAM: Phosphonate-binding periplasmic protein
YP_004627920.1	KEGG: tye:THEYE_A1111 two-component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004627921.1	KEGG: tye:THEYE_A1112 acetoacetate metabolism regulatory protein AtoC; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004627922.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A1127 anaerobic dimethyl sulfoxide reductase chain B
YP_004627923.1	KEGG: tye:THEYE_A1128 thiosulfate reductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region
YP_004627924.1	PFAM: Phosphate-selective porin O/P; KEGG: saf:SULAZ_1687 phosphate-selective porin O and P superfamily protein
YP_004627925.1	KEGG: sul:SYO3AOP1_0511 protein of unknown function DUF302
YP_004627926.1	PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A1130 hypothetical protein
YP_004627927.1	PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A1129 hypothetical protein
YP_004627928.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: tye:THEYE_A0654 isoleucyl-tRNA synthetase
YP_004627929.1	TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: hya:HY04AAS1_1257 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II
YP_004627930.1	KEGG: dak:DaAHT2_1547 hypothetical protein
YP_004627931.1	KEGG: tye:THEYE_A0114 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004627932.1	SMART: Excinuclease ABC, C subunit, N-terminal; TIGRFAM: Excinuclease ABC, C subunit; KEGG: dpr:Despr_0447 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein
YP_004627933.1	KEGG: geo:Geob_2600 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004627934.1	PFAM: Curlin associated; KEGG: svo:SVI_2693 hypothetical protein
YP_004627935.1	PFAM: Curlin associated; KEGG: fba:FIC_01314 hypothetical protein
YP_004627937.1	PFAM: Curli assembly protein CsgE; KEGG: ilo:IL0158 curli production assembly/transport component, CsgE
YP_004627938.1	PFAM: Curli production assembly/transport component CsgF; KEGG: fjo:Fjoh_2350 hypothetical protein
YP_004627939.1	PFAM: Curli production assembly/transport component CsgG; KEGG: fjo:Fjoh_2351 curli production assembly/transport component CsgG
YP_004627940.1	TIGRFAM: Thiamine biosynthesis Thi4 protein; HAMAP: thiazole biosynthetic enzyme; KEGG: pcl:Pcal_1555 ribulose-1,5-biphosphate synthetase; PFAM: Thiamine biosynthesis Thi4 protein
YP_004627941.1	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: pmx:PERMA_0977 type IV pilus assembly protein TapB
YP_004627942.1	PFAM: Type II secretion system F domain; KEGG: pmx:PERMA_0978 putative type II secretion system protein
YP_004627944.1	SMART: ATPase, AAA+ type, core; KEGG: pmx:PERMA_0968 peptidoglycan-binding domain 1 protein
YP_004627948.1	PFAM: Type II/III secretion system; KEGG: pmx:PERMA_0972 putative pilus
YP_004627949.1	KEGG: pmx:PERMA_0971 tetratricopeptide repeat domain protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat
YP_004627950.1	KEGG: tye:THEYE_A1502 putative hemagglutinin-related protein
YP_004627951.1	KEGG: dte:Dester_1442 N-methylation domain-containing protein
YP_004627952.1	KEGG: dps:DP2930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004627953.1	PFAM: Protein of unknown function DUF62; KEGG: gvi:glr2922 hypothetical protein
YP_004627954.1	KEGG: dth:DICTH_1386 tRNA methyl transferase
YP_004627955.1	KEGG: lba:Lebu_0483 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal
YP_004627956.1	PFAM: ABC transporter-like; KEGG: mka:MK1523 ABC-type molibdate transport systems, ATPase component; SMART: ATPase, AAA+ type, core
YP_004627957.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mpd:MCP_1862 ABC transporter permease protein
YP_004627958.1	KEGG: mka:MK1521 ABC-type molybdate transport system, periplasmic component; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004627959.1	PFAM: HTH transcriptional regulator, LysR; KEGG: tye:THEYE_A0050 molybdenum transport regulatory protein ModE
YP_004627960.1	TIGRFAM: MraZ; HAMAP: MraZ; KEGG: sfu:Sfum_3462 MraZ protein; PFAM: MraZ domain
YP_004627961.1	PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; manually curated; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: aae:aq_1875 S-adenosyl-methyltransferase MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004627963.1	KEGG: dth:DICTH_1138 penicillin-binding protein 2B, putative
YP_004627964.1	PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: tye:THEYE_A1328 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_004627965.1	TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: tmt:Tmath_1477 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004627966.1	TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: dal:Dalk_3134 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004627967.1	PFAM: Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: geo:Geob_0778 UDP-N-acetylmuramoylalanine/D-glutamate ligase
YP_004627968.1	TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: sat:SYN_01746 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28
YP_004627969.1	PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: dsa:Desal_0690 UDP-N-acetylmuramate--L-alanine ligase
YP_004627970.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: cni:Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004627971.1	PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: aoe:Clos_1381 polypeptide-transport-associated domain-containing protein
YP_004627972.1	KEGG: dde:Dde_1046 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain
YP_004627973.1	KEGG: dba:Dbac_2602 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_004627974.1	KEGG: aae:aq_324 hypothetical protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease
YP_004627975.1	PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: aae:aq_1336 hypothetical protein
YP_004627976.1	KEGG: hth:HTH_0191 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004627977.1	PFAM: Protein of unknown function DUF2148; KEGG: tye:THEYE_A1460 hypothetical protein
YP_004627978.1	KEGG: pmx:PERMA_1751 conserved protein YrvD
YP_004627979.1	KEGG: dte:Dester_1082 hypothetical protein
YP_004627980.1	KEGG: tte:TTE1737 HSP33-like chaperonin; HAMAP: Heat shock protein Hsp33 protein; PFAM: Heat shock protein Hsp33 protein
YP_004627981.1	PFAM: Dihydroorotate dehydrogenase, class 1/ 2; manually curated; KEGG: tit:Thit_1335 dihydroorotate dehydrogenase family protein; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core
YP_004627982.1	PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: tye:THEYE_A0542 dihydroorotate dehydrogenase electron transfer subunit
YP_004627983.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dal:Dalk_2850 hypothetical protein
YP_004627984.1	KEGG: dpr:Despr_2322 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_004627985.1	TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: gsu:GSU1690 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II
YP_004627986.1	PFAM: Glycosyl transferase, family 2; KEGG: mma:MM_0652 glycosyltransferase
YP_004627987.1	TIGRFAM: Methyltransferase FkbM; KEGG: bhy:BHWA1_02264 methyltransferase
YP_004627989.1	PFAM: Glutaredoxin; KEGG: apo:Arcpr_1659 hypothetical protein
YP_004627990.1	KEGG: dat:HRM2_46500 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat
YP_004627991.1	KEGG: dap:Dacet_0679 radical SAM domain protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB
YP_004627992.1	KEGG: tye:THEYE_A1495 sporulation kinase C; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004627993.1	KEGG: tye:THEYE_A1496 FrgC; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004627994.1	KEGG: tye:THEYE_A1562 OB-fold nucleic acid binding domain protein
YP_004627995.1	KEGG: tye:THEYE_A1561 hypothetical protein
YP_004627996.1	KEGG: dak:DaAHT2_0803 RNA modification enzyme, MiaB family; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; manually curated; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB
YP_004627997.1	PFAM: Creatininase; KEGG: sfu:Sfum_0661 creatininase
YP_004627998.1	TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; KEGG: ton:TON_0048 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like
YP_004627999.1	KEGG: pfo:Pfl01_2836 glycosyl transferase family protein
YP_004628000.1	KEGG: aae:aq_1106 hypothetical protein; TIGRFAM: Y414; PFAM: ATP dependent DNA ligase, central
YP_004628001.1	TIGRFAM: Sirohaem synthase, N-terminal; KEGG: adg:Adeg_1261 siroheme synthase
YP_004628002.1	PFAM: NUDIX hydrolase domain; KEGG: drt:Dret_1553 NUDIX hydrolase
YP_004628003.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: tye:THEYE_A0859 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_004628004.1	TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: sth:STH1471 50S ribosomal protein L19; PFAM: Ribosomal protein L19
YP_004628005.1	KEGG: dtu:Dtur_1531 ribonuclease H; PFAM: Ribonuclease HII/HIII
YP_004628006.1	KEGG: dtu:Dtur_1530 hypothetical protein; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102
YP_004628007.1	KEGG: sfu:Sfum_0165 hypothetical protein
YP_004628008.1	TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: toc:Toce_2133 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal
YP_004628009.1	KEGG: tye:THEYE_A1986 homoserine dehydrogenase (HDH): ThrA, MetL; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT
YP_004628010.1	KEGG: ssm:Spirs_2911 CheD
YP_004628011.1	KEGG: dak:DaAHT2_1683 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region
YP_004628012.1	KEGG: tye:THEYE_A0699 lipoprotein, putative
YP_004628014.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: tjr:TherJR_0068 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core
YP_004628015.1	TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: dap:Dacet_2370 hypothetical protein; PFAM: Uncharacterised protein family UPF0133
YP_004628016.1	KEGG: tmt:Tmath_0102 recombination protein RecR; TIGRFAM: RecR protein; HAMAP: Recombination protein recR
YP_004628018.1	KEGG: tte:TTE1450 DNA uptake Rossmann fold nucleotide-binding protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_004628019.1	KEGG: saf:SULAZ_1244 major facilitator family transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004628020.1	PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: dte:Dester_0424 phosphoribosylamine--glycine ligase
YP_004628021.1	TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: pab:PAB1077 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004628022.1	KEGG: tye:THEYE_A0996 hypothetical protein; TIGRFAM: SirA-related, selenium metabolism; PFAM: SirA-like
YP_004628023.1	PFAM: Glycosyl transferase, family 9; KEGG: hth:HTH_1721 glycosyltransferase
YP_004628024.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bcd:BARCL_0291 hypothetical protein
YP_004628025.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: tye:THEYE_A1274 AP endonuclease, family 2
YP_004628026.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dpr:Despr_0882 lytic transglycosylase catalytic
YP_004628027.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: aae:aq_619 adhesion B precursor
YP_004628028.1	KEGG: dak:DaAHT2_0637 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; SecF protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_004628029.1	PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: tmt:Tmath_1362 methionyl-tRNA formyltransferase
YP_004628030.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: pth:PTH_2122 ATPase with chaperone activity, ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004628031.1	PFAM: Heat shock protein Hsp20; KEGG: ddf:DEFDS_1576 heat shock protein Hsp20
YP_004628032.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: aat:D11S_0993 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004628033.1	SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: pmx:PERMA_1729 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core
YP_004628034.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: toc:Toce_2211 protein of unknown function DUF6 transmembrane
YP_004628035.1	PFAM: Peptidase M50; KEGG: dps:DP0062 hypothetical protein
YP_004628036.1	TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: sfu:Sfum_3063 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_004628037.1	KEGG: glo:Glov_2708 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_004628038.1	TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: adg:Adeg_0579 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_004628039.1	KEGG: ddf:DEFDS_0119 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_004628040.1	TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: ckn:Calkro_0900 ribosome recycling factor; PFAM: Ribosome recycling factor
YP_004628041.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: geb:GM18_2618 undecaprenyl diphosphate synthase
YP_004628042.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: cao:Celal_2323 phosphatidate cytidylyltransferase
YP_004628043.1	TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: sfu:Sfum_4103 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004628044.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: dpr:Despr_2926 D-alanine--D-alanine ligase
YP_004628046.1	KEGG: dat:HRM2_24820 OsmY; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004628047.1	TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM; KEGG: cbi:CLJ_B3885 radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_004628048.1	KEGG: tye:THEYE_A0926 hypothetical protein
YP_004628049.1	TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tye:THEYE_A0525 sodium/potassium-transporting ATPase, alpha subunit; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal
YP_004628050.1	KEGG: tye:THEYE_A0524 hypothetical protein
YP_004628051.1	TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: dpr:Despr_2635 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related
YP_004628052.1	KEGG: drt:Dret_0780 SagB-type dehydrogenase domain-containing protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase-like
YP_004628053.1	KEGG: dol:Dole_1544 phosphotransferase KptA/Tpt1
YP_004628054.1	KEGG: dak:DaAHT2_1066 RNA polymerase, sigma 70 subunit, RpoD subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2
YP_004628055.1	PFAM: DNA helicase, UvrD/REP type; KEGG: tye:THEYE_A0217 ATP-dependent DNA helicase PcrA
YP_004628056.1	PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: dte:Dester_1378 oligosaccharyl transferase STT3 subunit
YP_004628057.1	PFAM: Cupin 2, conserved barrel; KEGG: tye:THEYE_A1401 cupin domain protein
YP_004628058.1	TIGRFAM: Acetylglutamate kinase; KEGG: cni:Calni_0262 N-acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_004628059.1	TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: tam:Theam_1676 valyl-tRNA synthetase
YP_004628060.1	PFAM: Type IV pilus assembly PilZ
YP_004628061.1	PFAM: RecF/RecN/SMC protein, N-terminal; RepA / Rep+ protein KID; KEGG: tte:TTE1465 chromosome segregation ATPase
YP_004628062.1	TIGRFAM: putative regulatory domain-containing; KEGG: saf:SULAZ_0617 hypothetical protein
YP_004628063.1	KEGG: saf:SULAZ_0618 ATPase, RecA-superfamily; TIGRFAM: KaiC domain protein, AF_0795 family; PFAM: Circadian clock protein KaiC, central region
YP_004628064.1	TIGRFAM: Pyruvate kinase; KEGG: pmx:PERMA_0022 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta
YP_004628065.1	PFAM: DNA polymerase III, delta; KEGG: ssp:SSP1171 DNA polymerase III subunit delta
YP_004628066.1	KEGG: dal:Dalk_0911 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease
YP_004628067.1	PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: tye:THEYE_A1265 phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_004628068.1	KEGG: dol:Dole_2498 hypothetical protein
YP_004628069.1	KEGG: tal:Thal_0495 helicase; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal
YP_004628070.1	KEGG: sul:SYO3AOP1_1669 hypothetical protein
YP_004628071.1	KEGG: rrs:RoseRS_0892 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat
YP_004628072.1	KEGG: cac:CA_C0602 ATP-dependent zinc metallopeptidase FtsH (cell dividion protein); PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004628076.1	KEGG: tpt:Tpet_1768 hypothetical protein
YP_004628078.1	KEGG: saf:SULAZ_0692 hypothetical protein
YP_004628079.1	KEGG: cni:Calni_1953 hypothetical protein
YP_004628080.1	PFAM: Domain of unknown function DUF89; KEGG: cst:CLOST_0710 hypothetical protein
YP_004628081.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: aae:aq_657 topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain
YP_004628082.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: kol:Kole_1736 FolC bifunctional protein; PFAM: Mur ligase, central
YP_004628083.1	PFAM: Sodium/calcium exchanger membrane region; KEGG: tye:THEYE_A0130 Ca2+/Na+ antiporter
YP_004628084.1	PFAM: UspA; KEGG: tye:THEYE_A1200 universal stress protein, putative
YP_004628085.1	KEGG: tam:Theam_1607 ATPase with chaperone activity, ATP-binding subunit
YP_004628086.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pmx:PERMA_1485 macrolide export ATP-binding/permease protein MacB
YP_004628087.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: vpr:Vpar_1070 protein of unknown function DUF214
YP_004628088.1	PFAM: ABC transporter-like; KEGG: cbf:CLI_0142 putative macrolide efflux ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004628089.1	KEGG: tam:Theam_1131 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004628090.1	PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein
YP_004628091.1	PFAM: Amino acid permease-associated region; KEGG: saf:SULAZ_1269 amino acid permease-associated region
YP_004628092.1	KEGG: tvo:TVN0065 MarC family integral membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004628093.1	KEGG: tye:THEYE_A0587 hypothetical protein
YP_004628094.1	TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: tye:THEYE_A0556 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal
YP_004628095.1	PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: dth:DICTH_1086 MgpA protein
YP_004628096.1	TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: hor:Hore_07850 ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_004628097.1	PFAM: Protein of unknown function DUF503; KEGG: dae:Dtox_3603 hypothetical protein
YP_004628098.1	KEGG: chy:CHY_1766 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2
YP_004628099.1	PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: spl:Spea_1985 3-deoxy-manno-octulosonate cytidylyltransferase
YP_004628100.1	PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; KEGG: dth:DICTH_1399 hypothetical protein
YP_004628101.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: dal:Dalk_4293 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004628102.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: nis:NIS_0684 signal transduction response regulator; SMART: Diguanylate cyclase, predicted
YP_004628103.1	PFAM: ThiJ/PfpI; KEGG: sta:STHERM_c06320 hypothetical protein
YP_004628104.1	PFAM: Nucleotidyltransferase; KEGG: tmt:Tmath_0293 DNA polymerase beta domain protein region
YP_004628105.1	KEGG: rrs:RoseRS_4090 HEPN domain-containing protein; PFAM: HEPN; SMART: HEPN
YP_004628106.1	KEGG: pmx:PERMA_0683 hypothetical protein
YP_004628107.1	KEGG: bug:BC1001_3018 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain
YP_004628108.1	KEGG: msk:Msui08060 cell division protease FtsH-like protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004628113.1	PFAM: Domain of unknown function DUF2357; Protein of unknown function DUF524; KEGG: pho:PH0872 hypothetical protein
YP_004628114.1	KEGG: pho:PH0873 hypothetical protein
YP_004628115.1	KEGG: pmg:P9301_00401 hypothetical protein
YP_004628116.1	KEGG: mel:Metbo_1112 hypothetical protein
YP_004628117.1	KEGG: saf:SULAZ_0692 hypothetical protein
YP_004628118.1	KEGG: shc:Shell_0194 hypothetical protein
YP_004628119.1	KEGG: tye:THEYE_A1966 SpoVT / AbrB like domain protein; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted
YP_004628120.1	PFAM: PilT protein, N-terminal; KEGG: tye:THEYE_A1967 PIN domain, putative
YP_004628122.1	KEGG: tal:Thal_0002 hypothetical protein
YP_004628124.1	KEGG: tal:Thal_0004 hypothetical protein
YP_004628125.1	TIGRFAM: CRISPR-associated protein Csm1; KEGG: saf:SULAZ_1602 crispr-associated protein, Csm1 family
YP_004628126.1	KEGG: mru:mru_1182 CRISPR-associated protein Csm2 family; TIGRFAM: CRISPR-associated protein, TM1810 C-terminal; PFAM: CRISPR-associated protein, TM1810 C-terminal
YP_004628127.1	KEGG: saf:SULAZ_1604 crispr-associated RAMP protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; PFAM: Protein of unknown function DUF324
YP_004628128.1	KEGG: saf:SULAZ_1605 crispr-associated RAMP protein, Csm4 family; TIGRFAM: Protein of unknown function DUF314; PFAM: Protein of unknown function DUF324
YP_004628129.1	KEGG: saf:SULAZ_1607 crispr-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated protein, TM1807; PFAM: Protein of unknown function DUF324
YP_004628130.1	PFAM: Protein of unknown function DUF2276; KEGG: tam:Theam_0867 CRISPR-associated protein Cas6
YP_004628131.1	KEGG: toc:Toce_0530 CRISPR-associated protein, MJ1666 family; TIGRFAM: CRISPR-associated protein, MJ1666; PFAM: CRISPR-associated protein DxTHG
YP_004628133.1	TIGRFAM: Protein of unknown function DUF196; KEGG: tam:Theam_1535 CRISPR-associated protein Cas2
YP_004628134.1	KEGG: tam:Theam_1536 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004628135.1	TIGRFAM: Protein of unknown function DUF196
YP_004628136.1	PFAM: AIG2-like; KEGG: mvu:Metvu_1295 AIG2 family protein
YP_004628137.1	PFAM: AIG2-like; KEGG: cow:Calow_1927 AIG2 family protein
YP_004628138.1	PFAM: Protein of unknown function DUF202; KEGG: tye:THEYE_A0283 membrane protein
YP_004628139.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dte:Dester_0847 pseudouridine synthase Rsu; SMART: RNA-binding S4
YP_004628140.1	PFAM: K+ potassium transporter; KEGG: tye:THEYE_A1816 potassium uptake protein Kup
YP_004628141.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; CHASE4; KEGG: cbo:CBO0357 signaling protein; SMART: Diguanylate cyclase, predicted
YP_004628142.1	PFAM: Peptidase M54, archaemetzincin; KEGG: tye:THEYE_A0526 hypothetical protein
YP_004628143.1	KEGG: tye:THEYE_A1058 cytochrome c family protein, putative
YP_004628144.1	KEGG: tye:THEYE_A1057 hydrogen sulfide production: membrane anchoring protein
YP_004628145.1	PFAM: Cytochrome c, class III; KEGG: tye:THEYE_A1056 cytochrome c3 chain A
YP_004628146.1	KEGG: dpr:Despr_3180 hypothetical protein
YP_004628147.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: dal:Dalk_5223 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_004628148.1	KEGG: tye:THEYE_A2000 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; TIGRFAM: NAD-dependent DNA ligase; HAMAP: DNA ligase; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT
YP_004628149.1	PFAM: ResB-like; KEGG: dte:Dester_1268 hypothetical protein
YP_004628151.1	PFAM: ABC transporter-like; KEGG: nde:NIDE3338 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004628152.1	PFAM: ABC-2 type transporter; KEGG: nde:NIDE3335 putative ABC transporter ATP-binding and permease
YP_004628153.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: gsu:GSU1266 GTP-binding protein LepA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein LepA, C-terminal
YP_004628154.1	TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: tye:THEYE_A0098 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_004628156.1	KEGG: dol:Dole_3224 hypothetical protein; TIGRFAM: PhoU; PFAM: PhoU; Putitive phosphate transport regulator
YP_004628157.1	KEGG: hth:HTH_0621 ATPase, PP-loop superfamily; TIGRFAM: Uncharacterised protein family UPF0021, C-terminal; PFAM: PP-loop
YP_004628158.1	KEGG: dpr:Despr_0644 hypothetical protein
YP_004628159.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: dat:HRM2_11100 Pcm
YP_004628160.1	KEGG: apo:Arcpr_0650 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00725; PFAM: Conserved hypothetical protein CHP00730
YP_004628161.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dth:DICTH_1356 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4
YP_004628162.1	KEGG: tth:TTC0678 cadmium-zinc resistance protein CzrB; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004628163.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Glycosyl transferase, group 1; KEGG: tye:THEYE_A0826 3-deoxy-D-manno-octulosonic-acid transferase
YP_004628164.1	KEGG: tye:THEYE_A1535 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_004628165.1	PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: hor:Hore_15380 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
YP_004628166.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: bmq:BMQ_4704 ribonuclease PH
YP_004628167.1	PFAM: Radical SAM; KEGG: dal:Dalk_0910 DNA repair photolyase-like protein
YP_004628168.1	TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: aae:aq_1866 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding
YP_004628169.1	KEGG: aar:Acear_0853 CopG family transcriptional regulator; HAMAP: nickel-responsive regulator; PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding
YP_004628170.1	TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: gsu:GSU1485 ribonuclease R; SMART: Cold shock protein
YP_004628171.1	KEGG: tye:THEYE_A1152 hypothetical protein
YP_004628172.1	PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: dal:Dalk_0935 histidinol-phosphate aminotransferase
YP_004628173.1	PFAM: SUF system FeS cluster assembly, SufBD; KEGG: deb:DehaBAV1_0736 SufBD protein
YP_004628174.1	KEGG: det:DET0815 FeS assembly ATPase SufC, putative; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004628175.1	PFAM: DNA methylase N-4/N-6; KEGG: sul:SYO3AOP1_0022 DNA methylase N-4/N-6 domain protein
YP_004628176.1	KEGG: sul:SYO3AOP1_0021 conserved hypothetical cytosolic protein
YP_004628177.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: hth:HTH_1176 polyribonucleotide nucleotidyltransferase
YP_004628178.1	TIGRFAM: Purine nucleoside phosphorylase I, inosine/guanosine-specific; Inosine guanosine/xanthosine phosphorylase; KEGG: dak:DaAHT2_0643 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: Nucleoside phosphorylase
YP_004628179.1	KEGG: cni:Calni_1377 RNase G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_004628180.1	TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: dpr:Despr_1621 histidinol-phosphate phosphatase family protein; PFAM: Haloacid dehalogenase-like hydrolase
YP_004628181.1	KEGG: tye:THEYE_A0945 lipopolysaccharide heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase I; Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9
YP_004628182.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: ddf:DEFDS_0328 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004628183.1	KEGG: tye:THEYE_A0960 peptidase, M48 family; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p
YP_004628184.1	PFAM: Ferredoxin; KEGG: dak:DaAHT2_1982 ferredoxin
YP_004628185.1	TIGRFAM: Phosphatidylserine decarboxylase-related protein; KEGG: dps:DP2771 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_004628186.1	KEGG: sfu:Sfum_3028 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004628187.1	KEGG: drt:Dret_0295 hypothetical protein; HAMAP: UPF0296 protein; PFAM: Protein of unknown function DUF370
YP_004628188.1	KEGG: dte:Dester_0178 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region
YP_004628189.1	KEGG: tte:TTE2313 rRNA methylase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding
YP_004628191.1	KEGG: dte:Dester_0848 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004628192.1	PFAM: Protein of unknown function DUF151; KEGG: sfu:Sfum_0418 hypothetical protein
YP_004628193.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dae:Dtox_0367 dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_004628194.1	KEGG: hth:HTH_0216 hypothetical protein
YP_004628195.1	PFAM: Ferrous iron transporter, FeoA subunit; KEGG: cte:CT1744 hypothetical protein
YP_004628196.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Ferrous iron transporter, FeoA subunit; KEGG: glo:Glov_1783 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004628197.1	KEGG: dde:Dde_1151 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_004628198.1	PFAM: Ferrous iron transporter, FeoA subunit; KEGG: tye:THEYE_A0965 hypothetical protein
YP_004628199.1	KEGG: tye:THEYE_A0966 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal
YP_004628200.1	PFAM: Carbohydrate-selective porin OprB; KEGG: tye:THEYE_A1918 carbohydrate-selective porin, OprB family
YP_004628201.1	PFAM: Histidine triad (HIT) protein; KEGG: tye:THEYE_A0787 diadenosine tetraphosphate (Ap4A) hydrolase
YP_004628202.1	PFAM: Aminoacyl-tRNA synthetase, class I (M); TIGRFAM: Methionyl-tRNA synthetase, class Ia; HAMAP: Methionyl-tRNA synthetase; KEGG: dba:Dbac_3184 methionyl-tRNA synthetase
YP_004628203.1	PFAM: PSP1, C-terminal; KEGG: tit:Thit_0089 PSP1 domain protein
YP_004628204.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: pth:PTH_2623 molybdenum cofactor biosynthesis enzyme; SMART: Elongator protein 3/MiaB/NifB
YP_004628205.1	KEGG: tye:THEYE_A0253 hypothetical protein
YP_004628206.1	PFAM: Protein of unknown function DUF343; KEGG: tal:Thal_0599 hypothetical protein
YP_004628208.1	TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: tye:THEYE_A0400 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central
YP_004628209.1	PFAM: Protein of unknown function DUF43; KEGG: apo:Arcpr_0370 protein of unknown function DUF43
YP_004628210.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: saf:SULAZ_0401 PAS fold family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004628211.1	TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: tle:Tlet_0520 transcriptional regulator NrdR; PFAM: ATP-cone
YP_004628212.1	TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: wpi:WPa_0101 orotidine 5`-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core
YP_004628213.1	PFAM: Protein of unknown function DUF763; KEGG: dtu:Dtur_0772 protein of unknown function DUF763
YP_004628214.1	KEGG: dal:Dalk_0604 hypothetical protein
YP_004628215.1	PFAM: Nitrate reductase, gamma subunit; KEGG: tye:THEYE_A0005 DsrM protein
YP_004628216.1	KEGG: tye:THEYE_A0006 DsrK protein
YP_004628217.1	KEGG: tye:THEYE_A0007 cytochrome c family protein
YP_004628218.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: mta:Moth_1604 4Fe-4S ferredoxin, iron-sulfur binding
YP_004628219.1	PFAM: Polysulphide reductase, NrfD; KEGG: sfu:Sfum_1150 polysulfide reductase, NrfD
YP_004628220.1	KEGG: tye:THEYE_A0001 cobyrinic acid a,c-diamide synthase; TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase
YP_004628221.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: afu:AF0427 ferredoxin (fdx-4)
YP_004628222.1	PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: toc:Toce_1041 phosphopantetheine adenylyltransferase
YP_004628223.1	KEGG: gem:GM21_1506 hypothetical protein
YP_004628224.1	KEGG: dpr:Despr_3220 fimbrial assembly family protein
YP_004628225.1	KEGG: dpr:Despr_3219 fimbrial assembly protein PilO
YP_004628227.1	PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal; KEGG: lpa:lpa_01404 type IV pilus assembly protein PilQ
YP_004628228.1	PFAM: Glucose-inhibited division protein A-related; TIGRFAM: Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase, TrmFO; HAMAP: Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO; KEGG: adg:Adeg_0573 tRNA (uracil-5-)-methyltransferase Gid
YP_004628229.1	KEGG: dps:DP0909 hypothetical protein; TIGRFAM: YajC; PFAM: YajC
YP_004628230.1	PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: tte:TTE1183 queuine tRNA-ribosyltransferase
YP_004628231.1	KEGG: dpr:Despr_1050 class I/II aminotransferase; PFAM: Aminotransferase, class I/II
YP_004628233.1	PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: afu:AF0522 acetylornithine deacetylase
YP_004628234.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aae:aq_1482 hypothetical protein
YP_004628235.1	KEGG: tal:Thal_0005 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein, Cas6; PFAM: Protein of unknown function DUF57
YP_004628236.1	TIGRFAM: CRISPR-associated protein Cas5, Tneap type; CRISPR-associated protein Cas5; KEGG: cow:Calow_0070 crispr-associated protein cas5 family
YP_004628237.1	TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: cow:Calow_0071 crispr-associated helicase cas3; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal
YP_004628238.1	KEGG: tna:CTN_0713 CRISPR-associated exonuclease, Cas4 family; TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4
YP_004628239.1	KEGG: mta:Moth_1727 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004628240.1	TIGRFAM: Protein of unknown function DUF196; KEGG: mta:Moth_1726 hypothetical protein
YP_004628241.1	KEGG: hth:HTH_1148 hypothetical protein
YP_004628242.1	KEGG: sta:STHERM_c17460 HEPN domain-containing protein; PFAM: HEPN; SMART: HEPN
YP_004628243.1	PFAM: Nucleotidyltransferase; KEGG: fpl:Ferp_1558 DNA polymerase beta domain protein region
YP_004628244.1	KEGG: mja:MJ_0718 chromate resistance protein ChrA; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region
YP_004628245.1	KEGG: pca:Pcar_1273 glycosyltransferase
YP_004628246.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: cbh:CLC_3009 NAD-binding Rossmann fold family oxidoreductase
YP_004628247.1	KEGG: tsi:TSIB_2051 pyridoxal phosphate-dependent protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004628248.1	PFAM: Uncharacterised protein family, carbohydrate kinase-related; KEGG: tye:THEYE_A1504 hypothetical protein
YP_004628249.1	KEGG: tye:THEYE_A1505 hypothetical protein
YP_004628250.1	PFAM: SirA-like; KEGG: tye:THEYE_A1506 hypothetical protein
YP_004628251.1	KEGG: tye:THEYE_A1507 hypothetical protein
YP_004628252.1	PFAM: UspA; KEGG: tye:THEYE_A0762 universal stress protein, putative
YP_004628253.1	PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A0761 hypothetical protein
YP_004628254.1	KEGG: tye:THEYE_A0760 hypothetical protein
YP_004628257.1	KEGG: tye:THEYE_A0744 sensory transduction protein kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004628258.1	KEGG: tye:THEYE_A0743 response regulator HsfA; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004628259.1	KEGG: tye:THEYE_A1086 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066
YP_004628260.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain-like; HAMAP: Tryptophan synthase beta chain; KEGG: dtu:Dtur_1259 tryptophan synthase subunit beta
YP_004628261.1	PFAM: Zinc/iron permease; KEGG: tba:TERMP_01509 zinc transporter ZIP protein
YP_004628262.1	KEGG: afu:AF0577 hypothetical protein
YP_004628263.1	PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: tye:THEYE_A1653 2-dehydropantoate 2-reductase
YP_004628264.1	KEGG: hth:HTH_0871 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal
YP_004628265.1	PFAM: NAD+ synthase; TIGRFAM: NAD+ synthase; HAMAP: NH(3)-dependent NAD(+) synthetase; KEGG: tsi:TSIB_1759 NAD synthetase
YP_004628266.1	TIGRFAM: Glutamine synthetase type I; KEGG: tye:THEYE_A1685 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp
YP_004628267.1	TIGRFAM: Nif-specific regulatory protein; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; KEGG: tye:THEYE_A1703 transcriptional regulator; SMART: GAF; ATPase, AAA+ type, core
YP_004628268.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: tye:THEYE_A1702 hypothetical protein
YP_004628269.1	PFAM: Nitrogen regulatory protein PII; KEGG: dte:Dester_0028 nitrogen regulatory protein P-II
YP_004628270.1	PFAM: Transposase, IS116/IS110/IS902; KEGG: tye:THEYE_A1554 transposase, putative
YP_004628271.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: mei:Msip34_1172 aromatic hydrocarbon degradation membrane protein
YP_004628272.1	KEGG: dps:DP0087 AAS bifunctional protein; PFAM: AMP-dependent synthetase/ligase
YP_004628273.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: mpd:MCP_1034 ferredoxin
YP_004628274.1	KEGG: afu:AF2332 flavodoxin, putative
YP_004628275.1	PFAM: ATPase-like, ParA/MinD; KEGG: dpr:Despr_1045 ParA/MinD-like ATPase
YP_004628276.1	PFAM: PhoH-like protein; KEGG: sfu:Sfum_2163 PhoH family protein
YP_004628277.1	PFAM: Protein of unknown function YGGT; KEGG: din:Selin_0144 hypothetical protein
YP_004628278.1	KEGG: swo:Swol_0959 hypothetical protein; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167
YP_004628279.1	KEGG: ton:TON_0716 tRNA/rRNA cytosine-C5-methylase; TIGRFAM: Nop2p; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
YP_004628280.1	KEGG: sfu:Sfum_1271 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase
YP_004628281.1	KEGG: dps:DP1812 biotin carboxylase; PFAM: Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal
YP_004628282.1	KEGG: dak:DaAHT2_0461 acetyl-CoA carboxylase; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region
YP_004628283.1	KEGG: dak:DaAHT2_0462 hypothetical protein
YP_004628284.1	KEGG: dak:DaAHT2_0465 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase
YP_004628285.1	TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: dal:Dalk_3481 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like
YP_004628286.1	KEGG: ddf:DEFDS_1056 peptidyl-prolyl cis-trans isomerse D
YP_004628287.1	PFAM: ABC transporter-like; KEGG: afl:Aflv_2559 cell division ATPase; SMART: ATPase, AAA+ type, core
YP_004628290.1	KEGG: mtp:Mthe_0283 hypothetical protein
YP_004628291.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: dol:Dole_0293 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_004628292.1	PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: cni:Calni_0744 glycyl-tRNA synthetase alpha chain
YP_004628293.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: ddf:DEFDS_0236 glycyl-tRNA synthetase subunit beta
YP_004628294.1	TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; KEGG: dal:Dalk_1105 selenocysteine-specific translation elongation factor; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 2; Translation elongation factor SelB, winged helix, type 3
YP_004628295.1	KEGG: hth:HTH_0476 ATP-dependent protease
YP_004628296.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup; HAMAP: Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; KEGG: tye:THEYE_A0867 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004628297.1	PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; TIGRFAM: 3-isopropylmalate dehydratase, small subunit, subgroup; 3-isopropylmalate dehydratase, small subunit, bacterial-like; HAMAP: 3-isopropylmalate dehydratase small subunit; KEGG: cth:Cthe_2210 3-isopropylmalate dehydratase, small subunit
YP_004628298.1	KEGG: ddf:DEFDS_1789 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core
YP_004628299.1	KEGG: bce:BC4279 high-affinity zinc uptake system ATP-binding protein ZnuC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004628300.1	PFAM: ABC-3; KEGG: ipo:Ilyop_2389 ABC-3 protein
YP_004628301.1	KEGG: hor:Hore_21920 hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_004628302.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: hth:HTH_0353 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain
YP_004628303.1	PFAM: Protein of unknown function DUF82; KEGG: aae:aq_1110 hypothetical protein
YP_004628304.1	KEGG: sto:ST2238 DNA-directed DNA polymerase; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like
YP_004628305.1	PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: fno:Fnod_0583 electron transfer flavoprotein alpha subunit
YP_004628306.1	PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: osp:Odosp_3180 electron transfer flavoprotein alpha/beta-subunit
YP_004628307.1	KEGG: tye:THEYE_A0567 acyl-CoA dehydrogenase, short-chain specific; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004628308.1	KEGG: dth:DICTH_0796 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004628309.1	KEGG: bts:Btus_2781 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004628310.1	KEGG: tye:THEYE_A0864 hypothetical protein
YP_004628311.1	KEGG: tye:THEYE_A1945 hypothetical protein
YP_004628312.1	HAMAP: Phosphoribosylformylglycinamidine synthase 2; KEGG: gme:Gmet_1941 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_004628313.1	PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: dal:Dalk_0826 histidinol dehydrogenase
YP_004628314.1	KEGG: dat:HRM2_22130 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase
YP_004628315.1	KEGG: pca:Pcar_3121 hypothetical protein
YP_004628316.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; HAMAP: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: tal:Thal_1252 7-cyano-7-deazaguanine reductase
YP_004628318.1	KEGG: pfu:PF0742 putative ferritin; PFAM: Ferritin/Dps protein
YP_004628319.1	PFAM: ABC transporter-like; KEGG: tye:THEYE_A1923 cobalt import ATP-binding protein CbiO; SMART: ATPase, AAA+ type, core
YP_004628320.1	KEGG: tye:THEYE_A1922 cobalt ABC transporter, permease protein CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein
YP_004628321.1	KEGG: tye:THEYE_A1921 hypothetical protein
YP_004628322.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: tye:THEYE_A1920 CbiM
YP_004628323.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dte:Dester_1050 nickel transport complex protein, NikM subunit, transmembrane
YP_004628324.1	KEGG: dal:Dalk_5194 hypothetical protein
YP_004628325.1	PFAM: Transcription regulator, AsnC-type, C-terminal; KEGG: fal:FRAAL5817 hypothetical protein
YP_004628326.1	KEGG: ank:AnaeK_1974 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004628327.1	PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; KEGG: cce:Ccel_1797 chaperone protein DnaJ
YP_004628328.1	PFAM: MCP methyltransferase, CheR-type; KEGG: psl:Psta_3345 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_004628329.1	HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; KEGG: trq:TRQ2_0526 chemotaxis-specific methylesterase; SMART: Signal transduction response regulator, receiver region
YP_004628330.1	KEGG: pbs:Plabr_1783 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004628333.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: rno:687472 hypothetical protein LOC687472
YP_004628334.1	KEGG: dat:HRM2_37360 CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004628335.1	KEGG: dak:DaAHT2_1725 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3
YP_004628336.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tye:THEYE_A2073 flagellar biosynthesis protein FlhG
YP_004628337.1	PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: tnp:Tnap_0020 flagellar biosynthetic protein FlhF
YP_004628338.1	KEGG: dak:DaAHT2_1722 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_004628339.1	KEGG: slp:Slip_0972 flagellar biosynthetic protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter
YP_004628340.1	PFAM: Type III secretion system inner membrane R protein; KEGG: dal:Dalk_1005 flagellar biosynthetic protein FliR
YP_004628341.1	KEGG: sat:SYN_02834 flagellar biosynthetic protein; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3
YP_004628342.1	KEGG: dal:Dalk_1007 flagellar biosynthetic protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_004628344.1	KEGG: dvl:Dvul_2915 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_004628345.1	KEGG: tye:THEYE_A2081 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_004628346.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: dak:DaAHT2_1714 flagellar basal body-associated protein FliL
YP_004628347.1	KEGG: cju:C8J_0783 methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004628348.1	KEGG: sat:SYN_01003 appr-1-p histone processing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing
YP_004628349.1	PFAM: Protein of unknown function DUF114; KEGG: cni:Calni_1737 hypothetical protein
YP_004628350.1	PFAM: Peptidase S54, rhomboid; KEGG: ddf:DEFDS_0217 rhomboid family protein
YP_004628351.1	KEGG: mel:Metbo_1273 hypothetical protein
YP_004628352.1	KEGG: tye:THEYE_A1972 hypothetical protein
YP_004628353.1	PFAM: Methyltransferase type 12; KEGG: tye:THEYE_A2047 hypothetical protein
YP_004628354.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: tye:THEYE_A1512 flagellin
YP_004628355.1	KEGG: ddf:DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related
YP_004628356.1	PFAM: Radical SAM; KEGG: cbc:CbuK_1963 queuosine biosynthesis protein
YP_004628357.1	KEGG: dpr:Despr_1812 RNA polymerase sigma 32 subunit RpoH; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4
YP_004628358.1	PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: sat:SYN_00192 TPR repeat-containing protein
YP_004628360.1	PFAM: Cystathionine beta-synthase, core; Protein of unknown function DUF21; Transporter-associated region; KEGG: aar:Acear_0620 hypothetical protein
YP_004628361.1	PFAM: Transporter-associated region; Cystathionine beta-synthase, core; Protein of unknown function DUF21; KEGG: ttj:TTHA0734 hemolysin-related protein
YP_004628362.1	KEGG: pyo:PY04214 hypothetical protein
YP_004628363.1	KEGG: dpr:Despr_0597 hypothetical protein
YP_004628364.1	PFAM: DNA helicase, UvrD/REP type; KEGG: rmr:Rmar_0453 UvrD/REP helicase
YP_004628366.1	TIGRFAM: Transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: gme:Gmet_3547 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004628367.1	TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: dak:DaAHT2_1159 ribosomal protein L21; PFAM: Ribosomal protein L21
YP_004628368.1	TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: sta:STHERM_c10280 50S ribosomal protein L27; PFAM: Ribosomal protein L27
YP_004628369.1	TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: dps:DP0538 hypothetical protein; PFAM: Protein of unknown function DUF205
YP_004628370.1	PFAM: Protein of unknown function DUF342; KEGG: aar:Acear_1616 hypothetical protein
YP_004628371.1	KEGG: dpr:Despr_2934 hypothetical protein
YP_004628372.1	TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: cst:CLOST_0936 trnaile lysidine synthetase; PFAM: PP-loop
YP_004628373.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: ddf:DEFDS_1029 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004628374.1	TIGRFAM: Dihydropteroate synthase; KEGG: tam:Theam_0893 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS
YP_004628375.1	KEGG: pca:Pcar_0999 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00159; PFAM: DNA integrity scanning protein, DisA, N-terminal
YP_004628376.1	PFAM: YbbR-like; KEGG: tye:THEYE_A0045 hypothetical protein
YP_004628377.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: drt:Dret_1723 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004628379.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dak:DaAHT2_2325 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004628380.1	KEGG: ddf:DEFDS_1569 hypothetical protein
YP_004628381.1	PFAM: Radical SAM; KEGG: mtp:Mthe_1490 radical SAM domain-containing protein
YP_004628382.1	PFAM: Heat shock protein DnaJ, N-terminal
YP_004628383.1	PFAM: Nucleoside phosphorylase; KEGG: sfu:Sfum_1429 purine phosphorylases family protein 1
YP_004628384.1	TIGRFAM: Sugar fermentation stimulation protein; PFAM: Protein of unknown function DUF123; Sugar fermentation stimulation protein; KEGG: hmo:HM1_3020 sugar fermentation stimulation protein; SMART: Excinuclease ABC, C subunit, N-terminal
YP_004628385.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: cts:Ctha_0159 tRNA/rRNA methyltransferase SpoU
YP_004628386.1	KEGG: sat:SYN_01762 GTPase; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004628387.1	KEGG: sfu:Sfum_3646 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein
YP_004628388.1	KEGG: mfs:MFS40622_1672 conserved hypothetical cytosolic protein
YP_004628389.1	PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: dte:Dester_0361 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_004628390.1	KEGG: cni:Calni_0828 hnh endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004628391.1	PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: fno:Fnod_1232 cytidylate kinase
YP_004628392.1	TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: dau:Daud_1020 NusB antitermination factor; PFAM: NusB/RsmB/TIM44
YP_004628393.1	KEGG: dpr:Despr_3152 glyceraldehyde 3-phosphate dehydrogenase, NAD(P)-binding domain-containing protein; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004628394.1	KEGG: dak:DaAHT2_2096 pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region
YP_004628395.1	KEGG: tpe:Tpen_0757 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004628396.1	KEGG: aae:aq_567 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004628397.1	HAMAP: ATPase, P-loop-containing; KEGG: gem:GM21_3387 hypothetical protein
YP_004628398.1	KEGG: gsu:GSU1886 ribosomal subunit interface protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004628399.1	KEGG: tbo:Thebr_0751 RNA polymerase sigma-54 factor, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54
YP_004628400.1	PFAM: ABC transporter-like; KEGG: dte:Dester_1167 sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core
YP_004628401.1	PFAM: OstA-like protein; KEGG: sul:SYO3AOP1_0206 lipopolysaccharide transport periplasmic protein LptA
YP_004628402.1	TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: ade:Adeh_3594 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1
YP_004628403.1	KEGG: dth:DICTH_0814 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10
YP_004628404.1	KEGG: tye:THEYE_A1962 Uma3
YP_004628405.1	KEGG: cli:Clim_0865 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004628406.1	KEGG: tye:THEYE_A0863 hypothetical protein
YP_004628407.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: dsa:Desal_2398 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004628408.1	KEGG: dak:DaAHT2_0726 acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_004628409.1	KEGG: sfu:Sfum_1302 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004628410.1	KEGG: dsa:Desal_1554 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_004628411.1	TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: lby:Lbys_1578 TwiN-arginine translocation protein, TatA/e family subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004628412.1	PFAM: Nucleotidyl transferase; KEGG: dak:DaAHT2_0857 nucleotidyl transferase
YP_004628413.1	PFAM: Aminoglycoside phosphotransferase; KEGG: dal:Dalk_0960 aminoglycoside phosphotransferase
YP_004628414.1	PFAM: Dissimilatory sulphite reductase D; KEGG: dat:HRM2_42380 DsrD
YP_004628415.1	TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; KEGG: dma:DMR_03610 sulfite reductase beta subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004628416.1	TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; KEGG: drt:Dret_0244 sulfite reductase, dissimilatory-type alpha subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region
YP_004628417.1	KEGG: sat:SYN_01404 general secretion pathway protein E; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core
YP_004628418.1	TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Protein fdhD; KEGG: tye:THEYE_A0692 formate dehydrogenase family accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD
YP_004628419.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: saf:SULAZ_1595 metallo-beta-lactamase family protein
YP_004628421.1	TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: kol:Kole_1660 ribosomal protein L28; PFAM: Ribosomal protein L28
YP_004628422.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: gsu:GSU2236 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT
YP_004628423.1	PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: gbm:Gbem_3362 1-deoxy-D-xylulose-5-phosphate synthase
YP_004628424.1	KEGG: sfu:Sfum_1417 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004628425.1	TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: sca:Sca_1146 exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit
YP_004628426.1	PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: sat:SYN_02459 exodeoxyribonuclease VII large subunit
YP_004628427.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: tye:THEYE_A1862 iron-molybdenum cofactor-binding protein
YP_004628428.1	KEGG: tye:THEYE_A1864 hypothetical protein
YP_004628429.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: tye:THEYE_A1861 hypothetical protein
YP_004628430.1	PFAM: Methyltransferase type 11; KEGG: tye:THEYE_A1858 SAM-dependent methyltransferase, UbiE/COQ5 family
YP_004628431.1	PFAM: Cobyrinic acid a,c-diamide synthase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: aar:Acear_1795 cobyrinic acid ac-diamide synthase
YP_004628432.1	PFAM: Cobyrinic acid a,c-diamide synthase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A1857 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
YP_004628433.1	KEGG: gur:Gura_0299 hypothetical protein
YP_004628435.1	KEGG: tye:THEYE_A1309 Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_004628436.1	KEGG: tye:THEYE_A1308 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004628437.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: tye:THEYE_A1307 cytochrome d ubiquinol oxidase subunit I
YP_004628439.1	TIGRFAM: RNA ligase partner, MJ_0950 family; HAMAP: Uncharacterised protein family UPF0278; KEGG: tye:THEYE_A0318 hypothetical protein; PFAM: Uncharacterised protein family UPF0278
YP_004628440.1	KEGG: dbr:Deba_1413 hypothetical protein
YP_004628441.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: tye:THEYE_A1204 leucyl-tRNA synthetase
YP_004628442.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: sfu:Sfum_3896 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004628443.1	KEGG: cts:Ctha_1942 phage SPO1 DNA polymerase-like protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like
YP_004628444.1	PFAM: Nodulation efficiency, NfeD; KEGG: tye:THEYE_A0592 membrane-bound serine protease
YP_004628446.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; Uncharacterised protein family UPF0054; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: dpr:Despr_1292 pyridoxine 5'-phosphate synthase
YP_004628447.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: dte:Dester_1098 protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004628448.1	PFAM: Peptidase M18, aminopeptidase I; KEGG: abi:Aboo_1300 peptidase M18 aminopeptidase I
YP_004628449.1	TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: cni:Calni_1710 SSU ribosomal protein s20p; PFAM: Ribosomal protein S20
YP_004628450.1	KEGG: ddf:DEFDS_1534 translation elongation factor G; TIGRFAM: Small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal
YP_004628451.1	KEGG: dhd:Dhaf_1403 molybdenum cofactor synthesis domain protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_004628452.1	PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; manually curated; KEGG: dae:Dtox_3076 selenide, water dikinase; TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase
YP_004628453.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: tye:THEYE_A1140 2-hydroxyglutaryl-CoA dehydratase, beta subunit-like protein
YP_004628454.1	TIGRFAM: CoA enzyme activase; KEGG: tye:THEYE_A1141 activator of (R)-2-hydroxyglutaryl-CoA dehydratase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type
YP_004628455.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: drm:Dred_0411 LysR family transcriptional regulator
YP_004628456.1	TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; KEGG: tye:THEYE_A0891 formate dehydrogenase, alpha subunit, selenocysteine-containing; PFAM: Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004628457.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A0893 nitrate-inducible formate dehydrogenase, beta subunit
YP_004628458.1	KEGG: cki:Calkr_0802 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
YP_004628459.1	PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: hth:HTH_1465 tetraacyldisaccharide 4'-kinase
YP_004628460.1	KEGG: hth:HTH_1464 integral membrane protein
YP_004628461.1	PFAM: Histidine triad (HIT) protein; KEGG: sfu:Sfum_2126 histidine triad (HIT) protein
YP_004628462.1	PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HAMAP: Tyrosyl-tRNA synthetase; KEGG: ddf:DEFDS_0113 tyrosyl-tRNA synthetase
YP_004628463.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: dsa:Desal_0251 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
YP_004628464.1	TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: pmx:PERMA_0444 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
YP_004628465.1	KEGG: dbr:Deba_0813 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004628466.1	PFAM: Cysteine-rich region, CCG; KEGG: drt:Dret_1028 hypothetical protein
YP_004628467.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: tye:THEYE_A0199 ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004628468.1	PFAM: Transporter-associated region; Cystathionine beta-synthase, core; KEGG: pnu:Pnuc_1861 CBS domain-containing protein
YP_004628469.1	TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: geo:Geob_3094 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004628470.1	KEGG: vdi:Vdis_0046 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein
YP_004628471.1	PFAM: Ribonuclease H; Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; HAMAP: Ribonuclease H; KEGG: dth:DICTH_1206 deoxyribose-phosphate aldolase
YP_004628472.1	PFAM: Protein of unknown function DUF185; KEGG: pmx:PERMA_1980 hypothetical protein
YP_004628473.1	KEGG: ddf:DEFDS_0111 hypothetical protein
YP_004628474.1	KEGG: tye:THEYE_A1474 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004628475.1	KEGG: dat:HRM2_36510 CheW2; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004628476.1	KEGG: dpr:Despr_1818 CheA signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction response regulator, receiver region
YP_004628477.1	PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: gbm:Gbem_3904 peptidase LD-carboxypeptidase A family peptidase
YP_004628478.1	PFAM: Bordetella pertussis Bvg accessory factor; TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: dbr:Deba_0767 transcriptional activator, Baf family
YP_004628479.1	PFAM: Methyltransferase type 11; KEGG: dal:Dalk_1101 ribosomal L11 methyltransferase
YP_004628480.1	PFAM: Peptidase M48, Ste24p; KEGG: dak:DaAHT2_0005 peptidase M48 Ste24p
YP_004628481.1	KEGG: tye:THEYE_A1273 type I antifreeze protein; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004628483.1	PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: tye:THEYE_A1763 P-protein
YP_004628484.1	PFAM: Protein of unknown function DUF448; KEGG: dtu:Dtur_1207 protein of unknown function DUF448
YP_004628485.1	KEGG: dak:DaAHT2_1881 transcription termination factor NusA; TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; K Homology, type 1, subgroup
YP_004628486.1	KEGG: dth:DICTH_1080 YlxS; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090
YP_004628488.1	PFAM: Major facilitator superfamily MFS-1; KEGG: sul:SYO3AOP1_0407 major facilitator superfamily MFS_1
YP_004628489.1	TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: sul:SYO3AOP1_0795 magnesium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal
YP_004628490.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tye:THEYE_A1498 glucose inhibited division protein A
YP_004628491.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: dbr:Deba_0246 DNA polymerase III, subunit beta; PFAM: DNA polymerase III, beta chain
YP_004628492.1	TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: dak:DaAHT2_2107 DNA gyrase, B subunit; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like
YP_004628493.1	TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: cdl:CDR20291_2579 putative phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004628495.1	PFAM: Polysulphide reductase, NrfD; KEGG: tye:THEYE_A1280 polysulphide reductase, NrfD superfamily
YP_004628496.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A1281 iron-sulfur protein
YP_004628498.1	PFAM: Cytochrome c, class III; KEGG: tye:THEYE_A1283 high-molecular-weight cytochrome c
YP_004628499.1	KEGG: dol:Dole_0302 hypothetical protein; manually curated; PFAM: Cysteine-rich region, CCG
YP_004628500.1	KEGG: tye:THEYE_A1285 hypothetical protein
YP_004628501.1	KEGG: tye:THEYE_A1286 hypothetical protein
YP_004628502.1	PFAM: ABC transporter-like; KEGG: tye:THEYE_A1038 excinuclease ABC, A subunit
YP_004628503.1	KEGG: adg:Adeg_1792 DNA-directed DNA polymerase; PFAM: PHP, C-terminal; Nucleotidyltransferase; SMART: DNA-directed DNA polymerase, family X; Helix-hairpin-helix DNA-binding motif, class 1; Polymerase/histidinol phosphatase, N-terminal
YP_004628504.1	KEGG: tye:THEYE_A1325 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
YP_004628505.1	TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: cni:Calni_2007 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal
YP_004628506.1	KEGG: sfu:Sfum_1732 beta-lactamase domain-containing protein
YP_004628507.1	HAMAP: Shikimate kinase; KEGG: dal:Dalk_1763 shikimate kinase; PFAM: Shikimate kinase
YP_004628508.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: dpr:Despr_0289 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004628509.1	TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: tko:TK0265 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004628510.1	HAMAP: Dehydroquinase class I; KEGG: nmr:Nmar_0551 3-dehydroquinate dehydratase; PFAM: Dehydroquinase class I
YP_004628511.1	KEGG: dte:Dester_0983 bifunctional purine biosynthesis protein PurH; PFAM: MGS-like; AICARFT/IMPCHase bienzyme, formylation region
YP_004628512.1	KEGG: sfu:Sfum_3056 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004628513.1	PFAM: Signal transduction response regulator, receiver region; KEGG: dth:DICTH_1976 response regulator receiver sensor signal transduction histidine kinase
YP_004628514.1	KEGG: dal:Dalk_3859 ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core
YP_004628515.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: gur:Gura_0374 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004628516.1	KEGG: ttm:Tthe_2060 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004628518.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: sat:SYN_00126 pili retraction protein; SMART: ATPase, AAA+ type, core
YP_004628519.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: dat:HRM2_04990 PilT1; SMART: ATPase, AAA+ type, core
YP_004628520.1	PFAM: NIL domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: pth:PTH_1473 ferredoxin
YP_004628521.1	TIGRFAM: YcaO-like; PFAM: YcaO-like; Tetratricopeptide TPR-1; KEGG: dol:Dole_1241 hypothetical protein; SMART: Tetratricopeptide repeat
YP_004628522.1	TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: tal:Thal_1495 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; PFAM: tRNA methyl transferase-like
YP_004628523.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: tye:THEYE_A1151 glu-tRNAGln amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase
YP_004628524.1	PFAM: Initiation factor 2B related; TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; HAMAP: Methylthioribose-1-phosphate isomerase; KEGG: pmo:Pmob_0810 aIF-2BI family translation initiation factor
YP_004628525.1	KEGG: sfu:Sfum_1603 redox-sensing transcriptional repressor REX; HAMAP: Redox-sensing transcriptional repressor rex; PFAM: Rex DNA-binding, C-terminal; CoA-binding
YP_004628526.1	KEGG: drm:Dred_0491 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; PFAM: DeoxyUTP pyrophosphatase domain
YP_004628527.1	PFAM: Manganese/iron superoxide dismutase, C-terminal; KEGG: tye:THEYE_A0986 superoxide dismutase
YP_004628528.1	KEGG: sat:SYN_00467 putative cytoplasmic protein
YP_004628529.1	KEGG: dak:DaAHT2_0589 protein of unknown function DUF181; TIGRFAM: YcaO-like; PFAM: YcaO-like
YP_004628530.1	TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Helix-hairpin-helix motif; KEGG: chy:CHY_0402 competence protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1
YP_004628531.1	TIGRFAM: DsrC-like protein; KEGG: drt:Dret_1739 sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC-like protein
YP_004628532.1	PFAM: GCN5-related N-acetyltransferase; KEGG: tye:THEYE_A1043 bifunctional protein argHA
YP_004628533.1	PFAM: Sporulation/cell division region, bacteria; KEGG: xal:XALc_0565 hypothetical protein
YP_004628534.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: dte:Dester_1092 arginyl-tRNA synthetase
YP_004628536.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dth:DICTH_0081 ribosomal large subunit pseudouridine synthase C
YP_004628537.1	KEGG: sfu:Sfum_3774 membrane protein-like
YP_004628538.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: tye:THEYE_A1148 4-hydroxythreonine-4-phosphate dehydrogenase
YP_004628539.1	TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: sat:SYN_01983 chaperone protein; PFAM: Heat shock protein 70
YP_004628540.1	KEGG: ddf:DEFDS_2115 molecular chaperone GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor
YP_004628541.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: adg:Adeg_1872 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_004628542.1	KEGG: afu:AF0756 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2; Phosphoesterase, RecJ-like
YP_004628543.1	PFAM: Type IV pilus assembly PilZ; KEGG: tye:THEYE_A0814 type IV pilus assembly protein PilZ
YP_004628544.1	TIGRFAM: flagellar motor stator protein MotA; KEGG: tye:THEYE_A0813 lateral flagellar motor protein MotA
YP_004628545.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tye:THEYE_A0812 chemotaxis protein MotB
YP_004628546.1	TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: tte:TTE1619 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related
YP_004628547.1	PFAM: Archease, tRNA m5C methyltransferase chaperone; KEGG: pfu:PF1552 hypothetical protein
YP_004628548.1	KEGG: sep:SE1274 ComEC late competence protein 3; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein
YP_004628549.1	KEGG: tam:Theam_1066 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004628550.1	KEGG: dth:DICTH_1097 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004628551.1	TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: dak:DaAHT2_1895 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal
YP_004628552.1	TIGRFAM: ATPase, F1 complex, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; KEGG: dpr:Despr_2652 ATP synthase F1 subcomplex subunit beta; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_004628553.1	TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: dps:DP0833 ATP synthase, gamma chain (AtpG); PFAM: ATPase, F1 complex, gamma subunit
YP_004628554.1	TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: dol:Dole_0601 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_004628555.1	TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: dak:DaAHT2_1899 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004628556.1	TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: dpr:Despr_2656 H+transporting two-sector ATPase B/B' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_004628557.1	PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: dat:HRM2_35220 AtpF3
YP_004628558.1	PFAM: Cell cycle protein; KEGG: sat:SYN_00550 rod shape-determining protein
YP_004628559.1	TIGRFAM: Penicillin-binding protein 2; KEGG: sat:SYN_00551 cell elongation specific D,D-transpeptidase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004628561.1	KEGG: glo:Glov_2494 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_004628562.1	TIGRFAM: Threonine synthase; KEGG: gme:Gmet_1631 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004628564.1	KEGG: dal:Dalk_3435 beta-lactamase domain protein
YP_004628565.1	PFAM: Tetratricopeptide TPR-1; KEGG: ddf:DEFDS_1481 hypothetical protein
YP_004628566.1	PFAM: Pyridoxal phosphate-dependent transferase; TIGRFAM: L-seryl-tRNA selenium transferase; HAMAP: L-seryl-tRNA(Sec) selenium transferase; KEGG: cbb:CLD_1568 selenocysteine synthase
YP_004628567.1	TIGRFAM: Tyrosine/nicotianamine aminotransferase; KEGG: aba:Acid345_1458 aminotransferase; PFAM: Aminotransferase, class I/II
YP_004628568.1	PFAM: Pyruvate carboxyltransferase; Cache; KEGG: sfu:Sfum_3301 pyruvate carboxyltransferase
YP_004628569.1	KEGG: dpr:Despr_2185 TolB domain-containing protein
YP_004628570.1	KEGG: dal:Dalk_0986 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal
YP_004628571.1	KEGG: dak:DaAHT2_2345 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal
YP_004628574.1	KEGG: gsu:GSU3047 flagellar basal body P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein
YP_004628575.1	KEGG: tam:Theam_1462 flagellar L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein
YP_004628576.1	KEGG: sat:SYN_02818 flagellar basal body P-ring biosynthesis protein; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain
YP_004628577.1	KEGG: dal:Dalk_0993 flagellar basal body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004628578.1	KEGG: dak:DaAHT2_2352 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_004628579.1	KEGG: dpr:Despr_0576 outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004628580.1	PFAM: ABC transporter-like; KEGG: tal:Thal_0119 ABC transporter; SMART: ATPase, AAA+ type, core
YP_004628581.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tye:THEYE_A1232 ABC transporter, permease protein
YP_004628582.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase
YP_004628583.1	KEGG: efa:EF1648 phage integrase family site specific recombinase; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004628584.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; KEGG: atu:Atu1362 two component sensor kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction response regulator, receiver region
YP_004628585.1	PFAM: Major facilitator superfamily MFS-1; KEGG: tye:THEYE_A1311 permeases of the major facilitator superfamily
YP_004628586.1	KEGG: tna:CTN_0870 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004628588.1	PFAM: Phosphoenolpyruvate carboxylase_subgroup; TIGRFAM: Phosphoenolpyruvate carboxylase_subgroup; HAMAP: Phosphoenolpyruvate carboxylase_subgroup; KEGG: dau:Daud_0773 phosphoenolpyruvate carboxylase
YP_004628589.1	TIGRFAM: Chorismate synthase; KEGG: dak:DaAHT2_2093 chorismate synthase; PFAM: Chorismate synthase
YP_004628590.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: afl:Aflv_0080 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_004628592.1	KEGG: dak:DaAHT2_1713 aconitate hydratase; TIGRFAM: Aconitase, putative; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004628593.1	KEGG: drt:Dret_1382 MltB
YP_004628594.1	KEGG: bmj:BMULJ_05844 hypothetical protein
YP_004628595.1	PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: dat:HRM2_26840 CTP synthetase
YP_004628596.1	KEGG: tjr:TherJR_2593 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004628597.1	PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: tye:THEYE_A0564 quinolinate synthetase complex, A subunit
YP_004628600.1	SMART: Metal-dependent phosphohydrolase, HD region; K Homology; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; KEGG: toc:Toce_1209 metal dependent phosphohydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup
YP_004628601.1	KEGG: dtu:Dtur_0799 metallophosphoesterase; TIGRFAM: Conserved hypothetical protein CHP00282; PFAM: Metallophosphoesterase
YP_004628602.1	TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: sfu:Sfum_0147 peptide deformylase; PFAM: Formylmethionine deformylase
YP_004628603.1	KEGG: tai:Taci_1097 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004628604.1	TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; KEGG: dbr:Deba_3204 pyruvate/ketoisovalerate oxidoreductase, subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase
YP_004628605.1	KEGG: sfu:Sfum_2793 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004628606.1	KEGG: dbr:Deba_3202 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal
YP_004628607.1	KEGG: sfu:Sfum_2795 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004628608.1	HAMAP: UPF0173 metal-dependent hydrolase; KEGG: mka:MK1542 metal-dependent hydrolase
YP_004628609.1	PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: tam:Theam_0531 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_004628610.1	KEGG: nam:NAMH_0791 ExsB protein; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like
YP_004628611.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dpr:Despr_1616 hypothetical protein
YP_004628612.1	PFAM: Ferric-uptake regulator; KEGG: pth:PTH_0045 Fe2+/Zn2+ uptake regulation proteins
YP_004628613.1	KEGG: cac:CA_C1303 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_004628614.1	PFAM: Protein of unknown function DUF164; KEGG: dak:DaAHT2_0014 protein of unknown function DUF164
YP_004628615.1	KEGG: sat:SYN_02443 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004628616.1	TIGRFAM: Thioredoxin reductase; KEGG: dpr:Despr_2956 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004628618.1	TIGRFAM: L-aspartate oxidase; KEGG: dak:DaAHT2_2040 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004628619.1	TIGRFAM: Homoserine kinase, putative; Cofactor-independent phosphoglycerate mutase, archaeal; KEGG: tye:THEYE_A1682 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme
YP_004628620.1	PFAM: Sec-independent periplasmic protein translocase; KEGG: ddf:DEFDS_2140 twin-arginine translocation system component TatC
YP_004628621.1	KEGG: dat:HRM2_42340 twin arginine translocase protein A; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004628622.1	KEGG: dal:Dalk_2210 alanine racemase; manually curated; TIGRFAM: Alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; HAMAP: Alanine racemase
YP_004628623.1	KEGG: dak:DaAHT2_0308 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004628624.1	KEGG: tye:THEYE_A1648 putative zinc-binding protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding
YP_004628625.1	PFAM: UspA; KEGG: dbr:Deba_0851 UspA domain protein
YP_004628626.1	PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: dte:Dester_1517 argininosuccinate lyase
YP_004628627.1	KEGG: gur:Gura_3020 hypothetical protein
YP_004628628.1	KEGG: hth:HTH_0612 hypothetical protein
YP_004628629.1	PFAM: ApbE-like lipoprotein; KEGG: sfu:Sfum_2124 hypothetical protein
YP_004628630.1	TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: saf:SULAZ_0637 fumarate hydratase, class I; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region
YP_004628631.1	KEGG: cki:Calkr_1729 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_004628632.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: toc:Toce_0176 seryl-tRNA synthetase
YP_004628633.1	KEGG: chy:CHY_1698 prophage LambdaCh01 nuclease domain-containing protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like)
YP_004628635.1	KEGG: tye:THEYE_A1509 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_004628636.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: tye:THEYE_A1510 flagellar hook-associated protein 2
YP_004628637.1	PFAM: Flagellar protein FlaG protein; KEGG: saf:SULAZ_1109 flagellar protein FlaG
YP_004628638.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: dpr:Despr_0517 ornithine carbamoyltransferase
YP_004628639.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: dra:DR_2464 FKBP-type peptidyl-prolyl cis-trans isomerase
YP_004628640.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: lsp:Bsph_2120 oligopeptide transport system ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004628641.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dka:DKAM_0290 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal