-- dump date 20111121_015420 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004536256.1 334143100 10720278 86..1447 1 NC_015581.1 SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: tcx:Tcr_0001 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosomal replication initiator protein dnaA 1447 10720278 Thicy_0001 Thioalkalimicrobium cyclicum ALM1 chromosomal replication initiator protein dnaA YP_004536256.1 86 D 717773 CDS YP_004536257.1 334143101 10718790 1458..2567 1 NC_015581.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: tcx:Tcr_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 2567 10718790 Thicy_0002 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit beta YP_004536257.1 1458 D 717773 CDS YP_004536258.1 334143102 10718791 2684..2989 1 NC_015581.1 KEGG: tgr:Tgr7_1738 cytochrome c, class I; hypothetical protein 2989 10718791 Thicy_0003 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536258.1 2684 D 717773 CDS YP_004536259.1 334143103 10718792 3000..4292 1 NC_015581.1 PFAM: Flavocytochrome c sulphide dehydrogenase, flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tgr:Tgr7_3048 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein 4292 10718792 Thicy_0004 Thioalkalimicrobium cyclicum ALM1 flavocytochrome c sulfide dehydrogenase flavin-binding protein YP_004536259.1 3000 D 717773 CDS YP_004536260.1 334143104 10718793 4432..6294 1 NC_015581.1 PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: tcx:Tcr_1692 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 6294 10718793 Thicy_0005 Thioalkalimicrobium cyclicum ALM1 glucosamine--fructose-6-phosphate aminotransferase YP_004536260.1 4432 D 717773 CDS YP_004536261.1 334143105 10718794 6473..7477 1 NC_015581.1 TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: tcx:Tcr_0158 molybdenum cofactor synthesis-like; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 7477 10718794 Thicy_0006 Thioalkalimicrobium cyclicum ALM1 molybdenum cofactor biosynthesis protein A YP_004536261.1 6473 D 717773 CDS YP_004536262.1 334143106 10718795 7507..7761 1 NC_015581.1 KEGG: tcx:Tcr_0159 molybdopterin converting factor, subunit 1; TIGRFAM: Molybdopterin converting factor, subunit 1; MoaD, archaeal; PFAM: ThiamineS; molybdopterin converting factor subunit 1 7761 10718795 Thicy_0007 Thioalkalimicrobium cyclicum ALM1 molybdopterin converting factor subunit 1 YP_004536262.1 7507 D 717773 CDS YP_004536263.1 334143107 10718796 7765..8226 1 NC_015581.1 PFAM: Molybdopterin biosynthesis MoaE; KEGG: tcx:Tcr_0160 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 8226 10718796 Thicy_0008 Thioalkalimicrobium cyclicum ALM1 molybdopterin biosynthesis MoaE protein YP_004536263.1 7765 D 717773 CDS YP_004536264.1 334143108 10718797 8328..9551 1 NC_015581.1 KEGG: tcx:Tcr_0161 molybdopterin binding domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; molybdenum cofactor synthesis domain-containing protein 9551 10718797 Thicy_0009 Thioalkalimicrobium cyclicum ALM1 molybdenum cofactor synthesis domain-containing protein YP_004536264.1 8328 D 717773 CDS YP_004536265.1 334143109 10718798 9570..10043 1 NC_015581.1 KEGG: tcx:Tcr_0162 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C 10043 10718798 Thicy_0010 Thioalkalimicrobium cyclicum ALM1 molybdenum cofactor biosynthesis protein C YP_004536265.1 9570 D 717773 CDS YP_004536266.1 334143110 10718799 complement(10111..10299) 1 NC_015581.1 KEGG: pmy:Pmen_0336 hypothetical protein; hypothetical protein 10299 10718799 Thicy_0011 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536266.1 10111 R 717773 CDS YP_004536267.1 334143111 10718800 complement(10349..11530) 1 NC_015581.1 PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: tcx:Tcr_2132 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 11530 10718800 Thicy_0012 Thioalkalimicrobium cyclicum ALM1 phosphoribosylglycinamide formyltransferase 2 YP_004536267.1 10349 R 717773 CDS YP_004536268.1 334143112 10718801 complement(11534..12262) 1 NC_015581.1 PFAM: Nucleoside phosphorylase; TIGRFAM: MTA/SAH nucleosidase; HAMAP: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; KEGG: tcx:Tcr_2130 adenosylhomocysteine nucleosidase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 12262 10718801 Thicy_0013 Thioalkalimicrobium cyclicum ALM1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_004536268.1 11534 R 717773 CDS YP_004536269.1 334143113 10718802 complement(12259..12780) 1 NC_015581.1 HAMAP: S-ribosylhomocysteinase (LuxS); KEGG: abu:Abu_0111 S-ribosylhomocysteinase; PFAM: S-ribosylhomocysteinase (LuxS); quorum-sensing autoinducer 2 (AI-2), LuxS 12780 10718802 Thicy_0014 Thioalkalimicrobium cyclicum ALM1 quorum-sensing autoinducer 2 (AI-2), LuxS YP_004536269.1 12259 R 717773 CDS YP_004536270.1 334143114 10718803 12903..13058 1 NC_015581.1 hypothetical protein 13058 10718803 Thicy_0015 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536270.1 12903 D 717773 CDS YP_004536271.1 334143115 10718806 13570..14865 1 NC_015581.1 PFAM: RmuC; KEGG: lpf:lpl1087 hypothetical protein; RmuC-domain-containing protein 14865 10718806 Thicy_0016 Thioalkalimicrobium cyclicum ALM1 RmuC-domain-containing protein YP_004536271.1 13570 D 717773 CDS YP_004536272.1 334143116 10718807 15107..17251 1 NC_015581.1 PFAM: Sulphatase-modifying factor; Methyltransferase type 12; KEGG: tcx:Tcr_1543 hypothetical protein; sulfatase-modifying factor protein 17251 10718807 Thicy_0017 Thioalkalimicrobium cyclicum ALM1 sulfatase-modifying factor protein YP_004536272.1 15107 D 717773 CDS YP_004536273.1 334143117 10718808 17233..18495 1 NC_015581.1 KEGG: tcx:Tcr_1542 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; Cystathionine beta-lyase 18495 10718808 Thicy_0018 Thioalkalimicrobium cyclicum ALM1 Cystathionine beta-lyase YP_004536273.1 17233 D 717773 CDS YP_004536274.1 334143118 10718809 18492..19289 1 NC_015581.1 KEGG: tcx:Tcr_0569 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 19289 10718809 Thicy_0019 Thioalkalimicrobium cyclicum ALM1 3-oxoacyl-ACP reductase YP_004536274.1 18492 D 717773 CDS YP_004536275.1 334143119 10718810 complement(19324..19971) 1 NC_015581.1 TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: sku:Sulku_1000 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; adenylate kinase 19971 10718810 Thicy_0020 Thioalkalimicrobium cyclicum ALM1 adenylate kinase YP_004536275.1 19324 R 717773 CDS YP_004536276.1 334143120 10718811 complement(19989..22388) 1 NC_015581.1 TIGRFAM: Penicillin-binding protein 1A; KEGG: tcx:Tcr_2056 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein 22388 10718811 Thicy_0021 Thioalkalimicrobium cyclicum ALM1 penicillin-binding protein YP_004536276.1 19989 R 717773 CDS YP_004536277.1 334143121 10718812 complement(22526..22756) 1 NC_015581.1 hypothetical protein 22756 10718812 Thicy_0022 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536277.1 22526 R 717773 CDS YP_004536278.1 334143122 10718813 22976..23713 1 NC_015581.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: tau:Tola_0187 ribonuclease PH; Ribonuclease PH 23713 10718813 Thicy_0023 Thioalkalimicrobium cyclicum ALM1 Ribonuclease PH YP_004536278.1 22976 D 717773 CDS YP_004536279.1 334143123 10718814 23710..24300 1 NC_015581.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: pay:PAU_03283 putative deoxyribonucleotide triphosphate pyrophosphatase; nucleoside-triphosphatase rdgB 24300 10718814 Thicy_0024 Thioalkalimicrobium cyclicum ALM1 nucleoside-triphosphatase rdgB YP_004536279.1 23710 D 717773 CDS YP_004536280.1 334143124 10718815 24317..25567 1 NC_015581.1 TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: tcx:Tcr_0117 putative oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 25567 10718815 Thicy_0025 Thioalkalimicrobium cyclicum ALM1 oxygen-independent coproporphyrinogen III oxidase YP_004536280.1 24317 D 717773 CDS YP_004536281.1 334143125 10718816 25597..27351 1 NC_015581.1 PFAM: AsmA; KEGG: tcx:Tcr_0118 AsmA; AsmA family protein 27351 10718816 Thicy_0026 Thioalkalimicrobium cyclicum ALM1 AsmA family protein YP_004536281.1 25597 D 717773 CDS YP_004536282.1 334143126 10718817 complement(27394..28725) 1 NC_015581.1 KEGG: mmw:Mmwyl1_0985 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 28725 10718817 Thicy_0027 Thioalkalimicrobium cyclicum ALM1 DEAD/DEAH box helicase domain-containing protein YP_004536282.1 27394 R 717773 CDS YP_004536283.1 334143127 10718818 28918..29436 1 NC_015581.1 KEGG: ant:Arnit_1245 hypothetical protein; hypothetical protein 29436 10718818 Thicy_0028 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536283.1 28918 D 717773 CDS YP_004536284.1 334143128 10718819 complement(29489..30136) 1 NC_015581.1 KEGG: tcx:Tcr_0163 hypothetical protein; hypothetical protein 30136 10718819 Thicy_0029 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536284.1 29489 R 717773 CDS YP_004536285.1 334143129 10718820 complement(30149..30751) 1 NC_015581.1 KEGG: tcx:Tcr_0164 hypothetical protein; hypothetical protein 30751 10718820 Thicy_0030 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536285.1 30149 R 717773 CDS YP_004536286.1 334143130 10718821 complement(30777..31133) 1 NC_015581.1 KEGG: mgr:MGG_07173 hypothetical protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; Hpt domain-containing protein 31133 10718821 Thicy_0031 Thioalkalimicrobium cyclicum ALM1 Hpt domain-containing protein YP_004536286.1 30777 R 717773 CDS YP_004536287.1 334143131 10718822 complement(31297..32241) 1 NC_015581.1 KEGG: tgr:Tgr7_0208 proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase 32241 10718822 Thicy_0032 Thioalkalimicrobium cyclicum ALM1 proline iminopeptidase YP_004536287.1 31297 R 717773 CDS YP_004536288.1 334143132 10718823 complement(32250..34073) 1 NC_015581.1 KEGG: tcx:Tcr_0169 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA 34073 10718823 Thicy_0033 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein TypA YP_004536288.1 32250 R 717773 CDS YP_004536289.1 334143133 10718824 complement(34210..34656) 1 NC_015581.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein; hypothetical protein 34656 10718824 Thicy_0034 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536289.1 34210 R 717773 CDS YP_004536290.1 334143134 10718825 complement(34660..35148) 1 NC_015581.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0171 YeeE/YedE; hypothetical protein 35148 10718825 Thicy_0035 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536290.1 34660 R 717773 CDS YP_004536291.1 334143135 10718826 complement(35239..36990) 1 NC_015581.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: maq:Maqu_3470 putative sulfate transporter YchM; sulfate transporter 36990 10718826 Thicy_0036 Thioalkalimicrobium cyclicum ALM1 sulfate transporter YP_004536291.1 35239 R 717773 CDS YP_004536292.1 334143136 10718827 complement(36999..40712) 1 NC_015581.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: tcx:Tcr_0172 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; methionine synthase 40712 10718827 Thicy_0037 Thioalkalimicrobium cyclicum ALM1 methionine synthase YP_004536292.1 36999 R 717773 CDS YP_004536293.1 334143137 10718828 complement(40829..41353) 1 NC_015581.1 hypothetical protein 41353 10718828 Thicy_0038 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536293.1 40829 R 717773 CDS YP_004536294.1 334143138 10718829 complement(41428..41685) 1 NC_015581.1 hypothetical protein 41685 10718829 Thicy_0039 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536294.1 41428 R 717773 CDS YP_004536295.1 334143139 10718830 complement(41657..42463) 1 NC_015581.1 PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tcx:Tcr_1608 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 42463 10718830 Thicy_0040 Thioalkalimicrobium cyclicum ALM1 peptidase S8 and S53 subtilisin kexin sedolisin YP_004536295.1 41657 R 717773 CDS YP_004536296.1 334143140 10718831 complement(42712..43323) 1 NC_015581.1 KEGG: har:HEAR2756 putative chorismate--pyruvate lyase; HAMAP: Chorismate--pyruvate lyase; PFAM: Chorismate--pyruvate lyase; chorismate--pyruvate lyase 43323 10718831 Thicy_0041 Thioalkalimicrobium cyclicum ALM1 chorismate--pyruvate lyase YP_004536296.1 42712 R 717773 CDS YP_004536297.1 334143141 10718832 complement(43292..45394) 1 NC_015581.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_2153 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent DNA helicase RecG 45394 10718832 Thicy_0042 Thioalkalimicrobium cyclicum ALM1 ATP-dependent DNA helicase RecG YP_004536297.1 43292 R 717773 CDS YP_004536298.1 334143142 10718833 complement(45409..45795) 1 NC_015581.1 KEGG: tcx:Tcr_2150 YjgF-like protein; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 45795 10718833 Thicy_0043 Thioalkalimicrobium cyclicum ALM1 endoribonuclease L-PSP YP_004536298.1 45409 R 717773 CDS YP_004536299.1 334143143 10718834 complement(45828..48005) 1 NC_015581.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: tcx:Tcr_2144 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA 48005 10718834 Thicy_0044 Thioalkalimicrobium cyclicum ALM1 (p)ppGpp synthetase I SpoT/RelA YP_004536299.1 45828 R 717773 CDS YP_004536300.1 334143144 10718835 complement(48018..48242) 1 NC_015581.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: tcx:Tcr_2143 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 48242 10718835 Thicy_0045 Thioalkalimicrobium cyclicum ALM1 DNA-directed RNA polymerase subunit omega YP_004536300.1 48018 R 717773 CDS YP_004536301.1 334143145 10718836 48313..49188 1 NC_015581.1 PFAM: Mechanosensitive ion channel MscS; KEGG: pat:Patl_3333 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 49188 10718836 Thicy_0046 Thioalkalimicrobium cyclicum ALM1 mechanosensitive ion channel MscS YP_004536301.1 48313 D 717773 CDS YP_004536302.1 334143146 10718837 49185..49742 1 NC_015581.1 KEGG: tcx:Tcr_0151 hexapaptide repeat-containing transferase; hexapeptide repeat-containing transferase 49742 10718837 Thicy_0047 Thioalkalimicrobium cyclicum ALM1 hexapeptide repeat-containing transferase YP_004536302.1 49185 D 717773 CDS YP_004536303.1 334143147 10718838 complement(49687..50538) 1 NC_015581.1 TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: tcx:Tcr_0153 shikimate 5-dehydrogenase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Shikimate dehydrogenase substrate binding, N-terminal; shikimate dehydrogenase 50538 10718838 Thicy_0048 Thioalkalimicrobium cyclicum ALM1 shikimate dehydrogenase YP_004536303.1 49687 R 717773 CDS YP_004536304.1 334143148 10718839 complement(50535..51545) 1 NC_015581.1 KEGG: tcx:Tcr_0154 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase 51545 10718839 Thicy_0049 Thioalkalimicrobium cyclicum ALM1 porphobilinogen synthase YP_004536304.1 50535 R 717773 CDS YP_004536305.1 334143149 10718840 51924..53279 1 NC_015581.1 KEGG: tcx:Tcr_0156 Mo-Co oxidoreductase dimerisation subunit; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation; Nitrate reductase (NADH) 53279 10718840 Thicy_0050 Thioalkalimicrobium cyclicum ALM1 Nitrate reductase (NADH) YP_004536305.1 51924 D 717773 CDS YP_004536306.1 334143150 10718841 53266..54375 1 NC_015581.1 KEGG: tcx:Tcr_0157 hypothetical protein; hypothetical protein 54375 10718841 Thicy_0051 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536306.1 53266 D 717773 CDS YP_004536307.1 334143151 10718842 54541..55476 1 NC_015581.1 PFAM: Aminoglycoside phosphotransferase; TIGRFAM: Homoserine kinase ThrB; HAMAP: Homoserine kinase; KEGG: tcx:Tcr_0043 homoserine kinase; Homoserine kinase 55476 10718842 Thicy_0052 Thioalkalimicrobium cyclicum ALM1 Homoserine kinase YP_004536307.1 54541 D 717773 CDS YP_004536308.1 334143152 10718843 55644..57893 1 NC_015581.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: fbl:Fbal_1991 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 57893 10718843 Thicy_0053 Thioalkalimicrobium cyclicum ALM1 isocitrate dehydrogenase YP_004536308.1 55644 D 717773 CDS YP_004536309.1 334143153 10718844 57883..59526 1 NC_015581.1 KEGG: tcx:Tcr_2017 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 59526 10718844 Thicy_0054 Thioalkalimicrobium cyclicum ALM1 phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004536309.1 57883 D 717773 CDS YP_004536310.1 334143154 10718845 complement(59561..60241) 1 NC_015581.1 PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: tcx:Tcr_2053 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 60241 10718845 Thicy_0055 Thioalkalimicrobium cyclicum ALM1 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004536310.1 59561 R 717773 CDS YP_004536311.1 334143155 10718846 complement(60254..61081) 1 NC_015581.1 TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: tcx:Tcr_2052 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 61081 10718846 Thicy_0056 Thioalkalimicrobium cyclicum ALM1 exodeoxyribonuclease III YP_004536311.1 60254 R 717773 CDS YP_004536312.1 334143156 10718847 61207..62064 1 NC_015581.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: tcx:Tcr_2051 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 62064 10718847 Thicy_0057 Thioalkalimicrobium cyclicum ALM1 formyltetrahydrofolate deformylase YP_004536312.1 61207 D 717773 CDS YP_004536313.1 334143157 10718848 complement(62071..64323) 1 NC_015581.1 PFAM: Protein of unknown function DUF699, ATPase putative; KEGG: tcx:Tcr_2050 hypothetical protein; hypothetical protein 64323 10718848 Thicy_0058 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536313.1 62071 R 717773 CDS YP_004536314.1 334143158 10718849 64371..65732 1 NC_015581.1 KEGG: tcx:Tcr_0130 hypothetical protein; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; PFAM: FAD dependent oxidoreductase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 65732 10718849 Thicy_0059 Thioalkalimicrobium cyclicum ALM1 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC YP_004536314.1 64371 D 717773 CDS YP_004536315.1 334143159 10718850 65729..67396 1 NC_015581.1 KEGG: mmw:Mmwyl1_0714 hypothetical protein; hypothetical protein 67396 10718850 Thicy_0060 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536315.1 65729 D 717773 CDS YP_004536316.1 334143160 10718851 67485..68117 1 NC_015581.1 KEGG: mmw:Mmwyl1_0713 hypothetical protein; hypothetical protein 68117 10718851 Thicy_0061 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536316.1 67485 D 717773 CDS YP_004536317.1 334143161 10718852 68118..68321 1 NC_015581.1 hypothetical protein 68321 10718852 Thicy_0062 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536317.1 68118 D 717773 CDS YP_004536318.1 334143162 10718853 68358..68936 1 NC_015581.1 PFAM: YfaZ; KEGG: tcx:Tcr_0132 YfaZ; hypothetical protein 68936 10718853 Thicy_0063 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536318.1 68358 D 717773 CDS YP_004536319.1 334143163 10718854 69021..70343 1 NC_015581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hha:Hhal_1665 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 70343 10718854 Thicy_0064 Thioalkalimicrobium cyclicum ALM1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004536319.1 69021 D 717773 CDS YP_004536320.1 334143164 10718855 70350..70688 1 NC_015581.1 hypothetical protein 70688 10718855 Thicy_0065 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536320.1 70350 D 717773 CDS YP_004536321.1 334143165 10718856 70786..71550 1 NC_015581.1 PFAM: Molybdopterin binding; KEGG: tcx:Tcr_0136 molybdopterin binding domain-containing protein; molybdopterin binding domain-containing protein 71550 10718856 Thicy_0066 Thioalkalimicrobium cyclicum ALM1 molybdopterin binding domain-containing protein YP_004536321.1 70786 D 717773 CDS YP_004536322.1 334143166 10718857 71547..72731 1 NC_015581.1 KEGG: tcx:Tcr_0137 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; hypothetical protein 72731 10718857 Thicy_0067 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536322.1 71547 D 717773 CDS YP_004536323.1 334143167 10718858 72750..73199 1 NC_015581.1 KEGG: tcx:Tcr_0138 hypothetical protein; hypothetical protein 73199 10718858 Thicy_0068 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536323.1 72750 D 717773 CDS YP_004536324.1 334143168 10718859 73307..73912 1 NC_015581.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tgr:Tgr7_1468 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 73912 10718859 Thicy_0069 Thioalkalimicrobium cyclicum ALM1 OmpA/MotB domain-containing protein YP_004536324.1 73307 D 717773 CDS YP_004536325.1 334143169 10718860 74062..74811 1 NC_015581.1 KEGG: tcx:Tcr_0139 glutaredoxin-like region; TIGRFAM: Glutaredoxin-like region; PFAM: Redoxin; Glutaredoxin; glutaredoxin domain-containing protein 74811 10718860 Thicy_0070 Thioalkalimicrobium cyclicum ALM1 glutaredoxin domain-containing protein YP_004536325.1 74062 D 717773 CDS YP_004536326.1 334143170 10718861 74918..76273 1 NC_015581.1 KEGG: tcx:Tcr_0140 glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; glutathione-disulfide reductase 76273 10718861 Thicy_0071 Thioalkalimicrobium cyclicum ALM1 glutathione-disulfide reductase YP_004536326.1 74918 D 717773 CDS YP_004536327.1 334143171 10718862 complement(76275..77552) 1 NC_015581.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: tcx:Tcr_2142 three-deoxy-D-manno-octulosonic-acid transferase-like; tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 77552 10718862 Thicy_0072 Thioalkalimicrobium cyclicum ALM1 tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004536327.1 76275 R 717773 CDS YP_004536328.1 334143172 10718863 complement(77554..78300) 1 NC_015581.1 PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: tcx:Tcr_2141 3-deoxy-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 78300 10718863 Thicy_0073 Thioalkalimicrobium cyclicum ALM1 3-deoxy-manno-octulosonate cytidylyltransferase YP_004536328.1 77554 R 717773 CDS YP_004536329.1 334143173 10718864 complement(78300..79373) 1 NC_015581.1 PFAM: Alcohol dehydrogenase, iron-type; KEGG: tcx:Tcr_2140 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 79373 10718864 Thicy_0074 Thioalkalimicrobium cyclicum ALM1 iron-containing alcohol dehydrogenase YP_004536329.1 78300 R 717773 CDS YP_004536330.1 334143174 10718865 complement(79384..80571) 1 NC_015581.1 KEGG: tcx:Tcr_2139 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 80571 10718865 Thicy_0075 Thioalkalimicrobium cyclicum ALM1 glutamine--scyllo-inositol transaminase YP_004536330.1 79384 R 717773 CDS YP_004536331.1 334143175 10718866 complement(80585..81199) 1 NC_015581.1 KEGG: tcx:Tcr_2138 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region; guanylate kinase 81199 10718866 Thicy_0076 Thioalkalimicrobium cyclicum ALM1 guanylate kinase YP_004536331.1 80585 R 717773 CDS YP_004536332.1 334143176 10718867 81302..81829 1 NC_015581.1 HAMAP: Shikimate kinase; KEGG: tcx:Tcr_2137 shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 81829 10718867 Thicy_0077 Thioalkalimicrobium cyclicum ALM1 shikimate kinase YP_004536332.1 81302 D 717773 CDS YP_004536333.1 334143177 10718868 81883..82962 1 NC_015581.1 PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: tcx:Tcr_2136 3-dehydroquinate synthase; 3-dehydroquinate synthase 82962 10718868 Thicy_0078 Thioalkalimicrobium cyclicum ALM1 3-dehydroquinate synthase YP_004536333.1 81883 D 717773 CDS YP_004536334.1 334143178 10718869 83082..83990 1 NC_015581.1 PFAM: Aldose 1-epimerase; KEGG: tgr:Tgr7_2611 aldose 1-epimerase; aldose-1-epimerase 83990 10718869 Thicy_0079 Thioalkalimicrobium cyclicum ALM1 aldose-1-epimerase YP_004536334.1 83082 D 717773 CDS YP_004536335.1 334143179 10718870 83987..84322 1 NC_015581.1 KEGG: tcx:Tcr_0514 hypothetical protein; hypothetical protein 84322 10718870 Thicy_0080 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536335.1 83987 D 717773 CDS YP_004536336.1 334143180 10718871 complement(84399..85007) 1 NC_015581.1 KEGG: tcx:Tcr_0237 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; Superoxide dismutase 85007 10718871 Thicy_0081 Thioalkalimicrobium cyclicum ALM1 Superoxide dismutase YP_004536336.1 84399 R 717773 CDS YP_004536337.1 334143181 10718872 complement(85125..85433) 1 NC_015581.1 KEGG: tcx:Tcr_0238 hypothetical protein; HAMAP: YcgL domain; PFAM: YcgL domain; hypothetical protein 85433 10718872 Thicy_0082 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536337.1 85125 R 717773 CDS YP_004536338.1 334143182 10718873 85588..86559 1 NC_015581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0239 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 86559 10718873 Thicy_0083 Thioalkalimicrobium cyclicum ALM1 NAD-dependent epimerase/dehydratase YP_004536338.1 85588 D 717773 CDS YP_004536339.1 334143183 10718874 86563..87807 1 NC_015581.1 HAMAP: CCA-adding enzyme; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: tcx:Tcr_0240 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 87807 10718874 Thicy_0084 Thioalkalimicrobium cyclicum ALM1 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004536339.1 86563 D 717773 CDS YP_004536340.1 334143184 10718875 87808..88731 1 NC_015581.1 KEGG: tcx:Tcr_0241 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 88731 10718875 Thicy_0085 Thioalkalimicrobium cyclicum ALM1 cation diffusion facilitator family transporter YP_004536340.1 87808 D 717773 CDS YP_004536341.1 334143185 10718876 88770..90008 1 NC_015581.1 KEGG: tcx:Tcr_0242 secretion protein HlyD; secretion protein HlyD 90008 10718876 Thicy_0086 Thioalkalimicrobium cyclicum ALM1 secretion protein HlyD YP_004536341.1 88770 D 717773 CDS YP_004536342.1 334143186 10718877 90001..93111 1 NC_015581.1 PFAM: Acriflavin resistance protein; KEGG: tcx:Tcr_0243 acriflavin resistance protein; acriflavin resistance protein 93111 10718877 Thicy_0087 Thioalkalimicrobium cyclicum ALM1 acriflavin resistance protein YP_004536342.1 90001 D 717773 CDS YP_004536343.1 334143187 10718878 93277..95286 1 NC_015581.1 TIGRFAM: Transketolase, bacterial-like; KEGG: tcx:Tcr_0244 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 95286 10718878 Thicy_0088 Thioalkalimicrobium cyclicum ALM1 transketolase YP_004536343.1 93277 D 717773 CDS YP_004536344.1 334143188 10718879 95380..96378 1 NC_015581.1 TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tcx:Tcr_0245 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 96378 10718879 Thicy_0089 Thioalkalimicrobium cyclicum ALM1 glyceraldehyde-3-phosphate dehydrogenase YP_004536344.1 95380 D 717773 CDS YP_004536345.1 334143189 10718880 96389..97567 1 NC_015581.1 HAMAP: Phosphoglycerate kinase; KEGG: tcx:Tcr_0246 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 97567 10718880 Thicy_0090 Thioalkalimicrobium cyclicum ALM1 phosphoglycerate kinase YP_004536345.1 96389 D 717773 CDS YP_004536346.1 334143190 10718881 97808..99250 1 NC_015581.1 TIGRFAM: Pyruvate kinase; KEGG: tcx:Tcr_0247 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase 99250 10718881 Thicy_0091 Thioalkalimicrobium cyclicum ALM1 pyruvate kinase YP_004536346.1 97808 D 717773 CDS YP_004536347.1 334143191 10718882 99303..100367 1 NC_015581.1 TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: tcx:Tcr_0248 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 100367 10718882 Thicy_0092 Thioalkalimicrobium cyclicum ALM1 fructose-bisphosphate aldolase YP_004536347.1 99303 D 717773 CDS YP_004536348.1 334143192 10718883 100632..101684 1 NC_015581.1 PFAM: Porin, Gram-negative type; KEGG: tcx:Tcr_0464 porin; porin 101684 10718883 Thicy_0093 Thioalkalimicrobium cyclicum ALM1 porin YP_004536348.1 100632 D 717773 CDS YP_004536349.1 334143193 10718884 complement(101849..102799) 1 NC_015581.1 KEGG: cch:Cag_1509 hypothetical protein; hypothetical protein 102799 10718884 Thicy_0094 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536349.1 101849 R 717773 CDS YP_004536350.1 334143194 10718885 complement(102903..103628) 1 NC_015581.1 TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: tcx:Tcr_0261 dethiobiotin synthase; dethiobiotin synthetase 103628 10718885 Thicy_0095 Thioalkalimicrobium cyclicum ALM1 dethiobiotin synthetase YP_004536350.1 102903 R 717773 CDS YP_004536351.1 334143195 10718886 complement(103632..104519) 1 NC_015581.1 PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: tcx:Tcr_0262 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 104519 10718886 Thicy_0096 Thioalkalimicrobium cyclicum ALM1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004536351.1 103632 R 717773 CDS YP_004536352.1 334143196 10718887 complement(104529..104987) 1 NC_015581.1 PFAM: Phosphate-starvation-inducible E; KEGG: tcx:Tcr_0263 phosphate-starvation-inducible E; phosphate-starvation-inducible E 104987 10718887 Thicy_0097 Thioalkalimicrobium cyclicum ALM1 phosphate-starvation-inducible E YP_004536352.1 104529 R 717773 CDS YP_004536353.1 334143197 10718888 105177..105881 1 NC_015581.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: tcx:Tcr_0264 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 105881 10718888 Thicy_0098 Thioalkalimicrobium cyclicum ALM1 ribulose-phosphate 3-epimerase YP_004536353.1 105177 D 717773 CDS YP_004536354.1 334143198 10718889 105889..106575 1 NC_015581.1 TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: tcx:Tcr_0265 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 106575 10718889 Thicy_0099 Thioalkalimicrobium cyclicum ALM1 phosphoglycolate phosphatase YP_004536354.1 105889 D 717773 CDS YP_004536355.1 334143199 10718890 106579..108093 1 NC_015581.1 TIGRFAM: Anthranilate synthase component I; KEGG: tcx:Tcr_0266 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 108093 10718890 Thicy_0100 Thioalkalimicrobium cyclicum ALM1 anthranilate synthase component I YP_004536355.1 106579 D 717773 CDS YP_004536356.1 334143200 10718891 108077..108661 1 NC_015581.1 TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: tcx:Tcr_0267 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 108661 10718891 Thicy_0101 Thioalkalimicrobium cyclicum ALM1 glutamine amidotransferase of anthranilate synthase YP_004536356.1 108077 D 717773 CDS YP_004536357.1 334143201 10718892 108665..109684 1 NC_015581.1 PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: tcx:Tcr_0268 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 109684 10718892 Thicy_0102 Thioalkalimicrobium cyclicum ALM1 anthranilate phosphoribosyltransferase YP_004536357.1 108665 D 717773 CDS YP_004536358.1 334143202 10718893 109694..110500 1 NC_015581.1 KEGG: psa:PST_0747 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 110500 10718893 Thicy_0103 Thioalkalimicrobium cyclicum ALM1 indole-3-glycerol-phosphate synthase YP_004536358.1 109694 D 717773 CDS YP_004536359.1 334143203 10718894 110589..111017 1 NC_015581.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: tgr:Tgr7_2796 OsmC/Ohr family protein; OsmC family protein 111017 10718894 Thicy_0104 Thioalkalimicrobium cyclicum ALM1 OsmC family protein YP_004536359.1 110589 D 717773 CDS YP_004536360.1 334143204 10718895 111125..111631 1 NC_015581.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: tcx:Tcr_0272 S-adenosylmethionine decarboxylase related; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; S-adenosylmethionine decarboxylase 111631 10718895 Thicy_0105 Thioalkalimicrobium cyclicum ALM1 S-adenosylmethionine decarboxylase YP_004536360.1 111125 D 717773 CDS YP_004536361.1 334143205 10718896 111628..112455 1 NC_015581.1 TIGRFAM: Spermine synthase; HAMAP: Spermidine synthase; KEGG: tcx:Tcr_0273 spermidine synthase; PFAM: Spermine synthase; spermidine synthase 112455 10718896 Thicy_0106 Thioalkalimicrobium cyclicum ALM1 spermidine synthase YP_004536361.1 111628 D 717773 CDS YP_004536362.1 334143206 10718897 complement(112486..113817) 1 NC_015581.1 TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: tcx:Tcr_0277 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine--8-amino-7-oxononanoate aminotransferase 113817 10718897 Thicy_0107 Thioalkalimicrobium cyclicum ALM1 adenosylmethionine--8-amino-7-oxononanoate aminotransferase YP_004536362.1 112486 R 717773 CDS YP_004536363.1 334143207 10718901 114249..115439 1 NC_015581.1 manually curated; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: tcx:Tcr_0293 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 115439 10718901 Thicy_0108 Thioalkalimicrobium cyclicum ALM1 translation elongation factor Tu YP_004536363.1 114249 D 717773 CDS YP_004536364.1 334143208 10718903 115628..116011 1 NC_015581.1 KEGG: tcx:Tcr_0282 SecE subunit of protein translocation complex; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein; preprotein translocase subunit SecE 116011 10718903 Thicy_0109 Thioalkalimicrobium cyclicum ALM1 preprotein translocase subunit SecE YP_004536364.1 115628 D 717773 CDS YP_004536365.1 334143209 10718904 116013..116546 1 NC_015581.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: tcx:Tcr_0283 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor 116546 10718904 Thicy_0110 Thioalkalimicrobium cyclicum ALM1 NusG antitermination factor YP_004536365.1 116013 D 717773 CDS YP_004536366.1 334143210 10718905 116598..117026 1 NC_015581.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: tcx:Tcr_0284 ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 117026 10718905 Thicy_0111 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L11 YP_004536366.1 116598 D 717773 CDS YP_004536367.1 334143211 10718906 117033..117722 1 NC_015581.1 KEGG: tcx:Tcr_0285 ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 117722 10718906 Thicy_0112 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L1 YP_004536367.1 117033 D 717773 CDS YP_004536368.1 334143212 10718907 117886..118380 1 NC_015581.1 KEGG: tcx:Tcr_0286 ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 118380 10718907 Thicy_0113 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L10 YP_004536368.1 117886 D 717773 CDS YP_004536369.1 334143213 10718908 118420..118788 1 NC_015581.1 TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: alv:Alvin_2371 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 118788 10718908 Thicy_0114 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L7/L12 YP_004536369.1 118420 D 717773 CDS YP_004536370.1 334143214 10718909 118954..123012 1 NC_015581.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: tcx:Tcr_0288 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta 123012 10718909 Thicy_0115 Thioalkalimicrobium cyclicum ALM1 DNA-directed RNA polymerase subunit beta YP_004536370.1 118954 D 717773 CDS YP_004536371.1 334143215 10718910 123013..127254 1 NC_015581.1 SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: tcx:Tcr_0289 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' 127254 10718910 Thicy_0116 Thioalkalimicrobium cyclicum ALM1 DNA-directed RNA polymerase subunit beta' YP_004536371.1 123013 D 717773 CDS YP_004536372.1 334143216 10718911 127381..127758 1 NC_015581.1 KEGG: tcx:Tcr_0290 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 127758 10718911 Thicy_0117 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S12 YP_004536372.1 127381 D 717773 CDS YP_004536373.1 334143217 10718912 127813..128286 1 NC_015581.1 KEGG: tcx:Tcr_0291 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 128286 10718912 Thicy_0118 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S7 YP_004536373.1 127813 D 717773 CDS YP_004536374.1 334143218 10718913 128350..130452 1 NC_015581.1 KEGG: tcx:Tcr_0292 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G 130452 10718913 Thicy_0119 Thioalkalimicrobium cyclicum ALM1 translation elongation factor G YP_004536374.1 128350 D 717773 CDS YP_004536375.1 334143219 10718914 130478..131668 1 NC_015581.1 KEGG: tcx:Tcr_0293 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 131668 10718914 Thicy_0120 Thioalkalimicrobium cyclicum ALM1 translation elongation factor Tu YP_004536375.1 130478 D 717773 CDS YP_004536376.1 334143220 10718915 131770..132081 1 NC_015581.1 TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: tcx:Tcr_0294 ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 132081 10718915 Thicy_0121 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S10 YP_004536376.1 131770 D 717773 CDS YP_004536377.1 334143221 10718916 132139..132774 1 NC_015581.1 KEGG: tcx:Tcr_0295 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 132774 10718916 Thicy_0122 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L3 YP_004536377.1 132139 D 717773 CDS YP_004536378.1 334143222 10718917 132785..133405 1 NC_015581.1 PFAM: Ribosomal protein L4/L1e; KEGG: tcx:Tcr_0296 ribosomal protein L4/L1e; 50S ribosomal protein L4/L1e 133405 10718917 Thicy_0123 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L4/L1e YP_004536378.1 132785 D 717773 CDS YP_004536379.1 334143223 10718918 133402..133698 1 NC_015581.1 PFAM: Ribosomal protein L25/L23; KEGG: tcx:Tcr_0297 ribosomal L23 protein; 50S ribosomal protein L25/L23 133698 10718918 Thicy_0124 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L25/L23 YP_004536379.1 133402 D 717773 CDS YP_004536380.1 334143224 10718919 133709..134539 1 NC_015581.1 KEGG: tcx:Tcr_0298 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2; 50S ribosomal protein L2 134539 10718919 Thicy_0125 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L2 YP_004536380.1 133709 D 717773 CDS YP_004536381.1 334143225 10718920 134551..134826 1 NC_015581.1 KEGG: tcx:Tcr_0299 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 134826 10718920 Thicy_0126 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S19 YP_004536381.1 134551 D 717773 CDS YP_004536382.1 334143226 10718921 134839..135171 1 NC_015581.1 KEGG: tcx:Tcr_0300 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 135171 10718921 Thicy_0127 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L22 YP_004536382.1 134839 D 717773 CDS YP_004536383.1 334143227 10718922 135183..135872 1 NC_015581.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: tcx:Tcr_0301 ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 135872 10718922 Thicy_0128 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S3 YP_004536383.1 135183 D 717773 CDS YP_004536384.1 334143228 10718923 135886..136299 1 NC_015581.1 TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: tcx:Tcr_0302 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 136299 10718923 Thicy_0129 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L16 YP_004536384.1 135886 D 717773 CDS YP_004536385.1 334143229 10718924 136301..136492 1 NC_015581.1 KEGG: saz:Sama_0221 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 136492 10718924 Thicy_0130 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L29 YP_004536385.1 136301 D 717773 CDS YP_004536386.1 334143230 10718925 136494..136757 1 NC_015581.1 KEGG: tcx:Tcr_0304 ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 136757 10718925 Thicy_0131 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S17 YP_004536386.1 136494 D 717773 CDS YP_004536387.1 334143231 10718926 136876..137244 1 NC_015581.1 KEGG: cvi:CV_4176 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 137244 10718926 Thicy_0132 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L14 YP_004536387.1 136876 D 717773 CDS YP_004536388.1 334143232 10718927 137255..137569 1 NC_015581.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: tcx:Tcr_0306 ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 137569 10718927 Thicy_0133 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L24 YP_004536388.1 137255 D 717773 CDS YP_004536389.1 334143233 10718928 137583..138122 1 NC_015581.1 PFAM: Ribosomal protein L5; KEGG: tcx:Tcr_0307 50S ribosomal protein L5; 50S ribosomal protein L5 138122 10718928 Thicy_0134 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L5 YP_004536389.1 137583 D 717773 CDS YP_004536390.1 334143234 10718929 138134..138439 1 NC_015581.1 KEGG: tcx:Tcr_0308 ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14; 30S ribosomal protein S14 138439 10718929 Thicy_0135 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S14 YP_004536390.1 138134 D 717773 CDS YP_004536391.1 334143235 10718930 138449..138844 1 NC_015581.1 PFAM: Ribosomal protein S8; KEGG: tcx:Tcr_0309 ribosomal protein S8; 30S ribosomal protein S8 138844 10718930 Thicy_0136 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S8 YP_004536391.1 138449 D 717773 CDS YP_004536392.1 334143236 10718931 138856..139389 1 NC_015581.1 KEGG: tcx:Tcr_0310 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 139389 10718931 Thicy_0137 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L6 YP_004536392.1 138856 D 717773 CDS YP_004536393.1 334143237 10718932 139402..139755 1 NC_015581.1 KEGG: tcx:Tcr_0311 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 139755 10718932 Thicy_0138 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L18 YP_004536393.1 139402 D 717773 CDS YP_004536394.1 334143238 10718933 139770..140279 1 NC_015581.1 KEGG: tcx:Tcr_0312 ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; 30S ribosomal protein S5 140279 10718933 Thicy_0139 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S5 YP_004536394.1 139770 D 717773 CDS YP_004536395.1 334143239 10718934 140281..140469 1 NC_015581.1 KEGG: tcx:Tcr_0313 ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region; 50S ribosomal protein L30 140469 10718934 Thicy_0140 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L30 YP_004536395.1 140281 D 717773 CDS YP_004536396.1 334143240 10718935 140471..140905 1 NC_015581.1 KEGG: tcx:Tcr_0314 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15; 50S ribosomal protein L15 140905 10718935 Thicy_0141 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L15 YP_004536396.1 140471 D 717773 CDS YP_004536397.1 334143241 10718936 140909..142237 1 NC_015581.1 KEGG: tcx:Tcr_0315 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY 142237 10718936 Thicy_0142 Thioalkalimicrobium cyclicum ALM1 preprotein translocase subunit SecY YP_004536397.1 140909 D 717773 CDS YP_004536398.1 334143242 10718937 142325..142681 1 NC_015581.1 KEGG: tcx:Tcr_0316 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 142681 10718937 Thicy_0143 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S13 YP_004536398.1 142325 D 717773 CDS YP_004536399.1 334143243 10718938 142700..143089 1 NC_015581.1 KEGG: tcx:Tcr_0317 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 143089 10718938 Thicy_0144 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S11 YP_004536399.1 142700 D 717773 CDS YP_004536400.1 334143244 10718939 143101..143721 1 NC_015581.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: tcx:Tcr_0318 ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 143721 10718939 Thicy_0145 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S4 YP_004536400.1 143101 D 717773 CDS YP_004536401.1 334143245 10718940 143747..144733 1 NC_015581.1 SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: tcx:Tcr_0319 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha 144733 10718940 Thicy_0146 Thioalkalimicrobium cyclicum ALM1 DNA-directed RNA polymerase subunit alpha YP_004536401.1 143747 D 717773 CDS YP_004536402.1 334143246 10718941 144752..145147 1 NC_015581.1 TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: tcx:Tcr_0320 ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 145147 10718941 Thicy_0147 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L17 YP_004536402.1 144752 D 717773 CDS YP_004536403.1 334143247 10718942 145198..145950 1 NC_015581.1 PFAM: Deoxyribonuclease, TatD-related; KEGG: tcx:Tcr_0321 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 145950 10718942 Thicy_0148 Thioalkalimicrobium cyclicum ALM1 TatD-related deoxyribonuclease YP_004536403.1 145198 D 717773 CDS YP_004536404.1 334143248 10718943 145937..146668 1 NC_015581.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: tcx:Tcr_0322 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 146668 10718943 Thicy_0149 Thioalkalimicrobium cyclicum ALM1 UBA/THIF-type NAD/FAD binding protein YP_004536404.1 145937 D 717773 CDS YP_004536405.1 334143249 10718944 146668..147771 1 NC_015581.1 KEGG: tcx:Tcr_1848 hypothetical protein; hypothetical protein 147771 10718944 Thicy_0150 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536405.1 146668 D 717773 CDS YP_004536406.1 334143250 10718945 complement(147818..149077) 1 NC_015581.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: tcx:Tcr_1847 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 149077 10718945 Thicy_0151 Thioalkalimicrobium cyclicum ALM1 diaminopimelate decarboxylase YP_004536406.1 147818 R 717773 CDS YP_004536407.1 334143251 10718946 complement(149079..149282) 1 NC_015581.1 hypothetical protein 149282 10718946 Thicy_0152 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536407.1 149079 R 717773 CDS YP_004536408.1 334143252 10718947 149369..150058 1 NC_015581.1 KEGG: tcx:Tcr_1846 carboxylesterase; PFAM: Phospholipase/carboxylesterase; carboxylesterase 150058 10718947 Thicy_0153 Thioalkalimicrobium cyclicum ALM1 carboxylesterase YP_004536408.1 149369 D 717773 CDS YP_004536409.1 334143253 10718948 150058..150447 1 NC_015581.1 PFAM: Thioesterase superfamily; KEGG: pha:PSHAa0477 thioesterase superfamily protein; thioesterase superfamily protein 150447 10718948 Thicy_0154 Thioalkalimicrobium cyclicum ALM1 thioesterase superfamily protein YP_004536409.1 150058 D 717773 CDS YP_004536410.1 334143254 10718949 150461..151687 1 NC_015581.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: tcx:Tcr_1915 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 151687 10718949 Thicy_0155 Thioalkalimicrobium cyclicum ALM1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004536410.1 150461 D 717773 CDS YP_004536411.1 334143255 10718950 complement(151731..154538) 1 NC_015581.1 TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: tcx:Tcr_0324 excinuclease ABC, A subunit; PFAM: ABC transporter-like; UvrABC system protein A 154538 10718950 Thicy_0156 Thioalkalimicrobium cyclicum ALM1 UvrABC system protein A YP_004536411.1 151731 R 717773 CDS YP_004536412.1 334143256 10718951 154759..155370 1 NC_015581.1 PFAM: Flavin reductase-like, FMN-binding; KEGG: hypothetical protein; flavin reductase domain-containing FMN-binding protein 155370 10718951 Thicy_0157 Thioalkalimicrobium cyclicum ALM1 flavin reductase domain-containing FMN-binding protein YP_004536412.1 154759 D 717773 CDS YP_004536413.1 334143257 10718952 155430..155738 1 NC_015581.1 KEGG: tcx:Tcr_1017 hypothetical protein; hypothetical protein 155738 10718952 Thicy_0158 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536413.1 155430 D 717773 CDS YP_004536414.1 334143258 10718953 155758..156144 1 NC_015581.1 PFAM: Protein of unknown function DUF302; KEGG: tcx:Tcr_2069 hypothetical protein; hypothetical protein 156144 10718953 Thicy_0159 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536414.1 155758 D 717773 CDS YP_004536415.1 334143259 10718954 156258..157841 1 NC_015581.1 PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; KEGG: maq:Maqu_3105 deoxyribodipyrimidine photo-lyase; DNA photolyase FAD-binding protein 157841 10718954 Thicy_0160 Thioalkalimicrobium cyclicum ALM1 DNA photolyase FAD-binding protein YP_004536415.1 156258 D 717773 CDS YP_004536416.1 334143260 10718955 157848..158000 1 NC_015581.1 KEGG: hoh:Hoch_1752 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205; hypothetical protein 158000 10718955 Thicy_0161 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536416.1 157848 D 717773 CDS YP_004536417.1 334143261 10718956 157981..159534 1 NC_015581.1 KEGG: mpt:Mpe_A2055 putative alpha-deoxyribodipyrimidine photolyase-related protein; manually curated; PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; deoxyribodipyrimidine photolyase-like protein 159534 10718956 Thicy_0162 Thioalkalimicrobium cyclicum ALM1 deoxyribodipyrimidine photolyase-like protein YP_004536417.1 157981 D 717773 CDS YP_004536418.1 334143262 10718957 159713..161104 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0326 major facilitator transporter; major facilitator superfamily protein 161104 10718957 Thicy_0163 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004536418.1 159713 D 717773 CDS YP_004536419.1 334143263 10718958 161112..161690 1 NC_015581.1 KEGG: tcx:Tcr_0327 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 161690 10718958 Thicy_0164 Thioalkalimicrobium cyclicum ALM1 single-strand binding protein YP_004536419.1 161112 D 717773 CDS YP_004536420.1 334143264 10718959 complement(161718..162683) 1 NC_015581.1 KEGG: tcx:Tcr_0340 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; trans-hexaprenyltranstransferase 162683 10718959 Thicy_0165 Thioalkalimicrobium cyclicum ALM1 trans-hexaprenyltranstransferase YP_004536420.1 161718 R 717773 CDS YP_004536421.1 334143265 10718960 162979..163293 1 NC_015581.1 TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: tcx:Tcr_0341 ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 163293 10718960 Thicy_0166 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L21 YP_004536421.1 162979 D 717773 CDS YP_004536422.1 334143266 10718961 163358..163621 1 NC_015581.1 TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: tcx:Tcr_0342 50S ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 163621 10718961 Thicy_0167 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L27 YP_004536422.1 163358 D 717773 CDS YP_004536423.1 334143267 10718962 163723..164787 1 NC_015581.1 TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: tcx:Tcr_0343 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTPase obg 164787 10718962 Thicy_0168 Thioalkalimicrobium cyclicum ALM1 GTPase obg YP_004536423.1 163723 D 717773 CDS YP_004536424.1 334143268 10718963 164789..165910 1 NC_015581.1 SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: tcx:Tcr_0344 gamma-glutamyl kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase 165910 10718963 Thicy_0169 Thioalkalimicrobium cyclicum ALM1 glutamate 5-kinase YP_004536424.1 164789 D 717773 CDS YP_004536425.1 334143269 10718964 165962..167314 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ant:Arnit_2391 major facilitator superfamily protein; major facilitator superfamily protein 167314 10718964 Thicy_0170 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004536425.1 165962 D 717773 CDS YP_004536426.1 334143270 10718965 complement(167311..168366) 1 NC_015581.1 PFAM: Porin, Gram-negative type; KEGG: tgr:Tgr7_3127 porin gram-negative type; porin 168366 10718965 Thicy_0171 Thioalkalimicrobium cyclicum ALM1 porin YP_004536426.1 167311 R 717773 CDS YP_004536427.1 334143271 10718966 complement(168390..170351) 1 NC_015581.1 KEGG: dak:DaAHT2_1056 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter 170351 10718966 Thicy_0172 Thioalkalimicrobium cyclicum ALM1 choline/carnitine/betaine transporter YP_004536427.1 168390 R 717773 CDS YP_004536428.1 334143272 10718967 170650..170937 1 NC_015581.1 KEGG: mca:MCA0706 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; 10 kDa chaperonin 170937 10718967 Thicy_0173 Thioalkalimicrobium cyclicum ALM1 10 kDa chaperonin YP_004536428.1 170650 D 717773 CDS YP_004536429.1 334143273 10718968 170975..172606 1 NC_015581.1 TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: tcx:Tcr_0346 chaperonin Cpn60/TCP-1; PFAM: Chaperonin Cpn60/TCP-1; 60 kDa chaperonin 172606 10718968 Thicy_0174 Thioalkalimicrobium cyclicum ALM1 60 kDa chaperonin YP_004536429.1 170975 D 717773 CDS YP_004536430.1 334143274 10718969 172743..173789 1 NC_015581.1 PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: tcx:Tcr_0348 N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-gamma-glutamyl-phosphate reductase 173789 10718969 Thicy_0175 Thioalkalimicrobium cyclicum ALM1 N-acetyl-gamma-glutamyl-phosphate reductase YP_004536430.1 172743 D 717773 CDS YP_004536431.1 334143275 10718970 173887..174231 1 NC_015581.1 TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: tcx:Tcr_0349 HesB/YadR/YfhF; PFAM: FeS cluster biogenesis; Iron--sulfur cluster insertion protein erpA 174231 10718970 Thicy_0176 Thioalkalimicrobium cyclicum ALM1 Iron--sulfur cluster insertion protein erpA YP_004536431.1 173887 D 717773 CDS YP_004536432.1 334143276 10718971 174292..175494 1 NC_015581.1 KEGG: tcx:Tcr_0350 citrate synthase; PFAM: Citrate synthase-like; citrate (Si)-synthase 175494 10718971 Thicy_0177 Thioalkalimicrobium cyclicum ALM1 citrate (Si)-synthase YP_004536432.1 174292 D 717773 CDS YP_004536433.1 334143277 10718972 175663..176091 1 NC_015581.1 KEGG: tcx:Tcr_0461 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 176091 10718972 Thicy_0178 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L13 YP_004536433.1 175663 D 717773 CDS YP_004536434.1 334143278 10718973 176102..176494 1 NC_015581.1 PFAM: Ribosomal protein S9; KEGG: tcx:Tcr_0462 ribosomal protein S9; 30S ribosomal protein S9 176494 10718973 Thicy_0179 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S9 YP_004536434.1 176102 D 717773 CDS YP_004536435.1 334143279 10718974 176609..177055 1 NC_015581.1 TIGRFAM: PAS; PFAM: PAS fold; KEGG: pmy:Pmen_3284 putative PAS/PAC sensor protein; SMART: PAC motif; PAS; PAS sensor protein 177055 10718974 Thicy_0180 Thioalkalimicrobium cyclicum ALM1 PAS sensor protein YP_004536435.1 176609 D 717773 CDS YP_004536436.1 334143280 10718975 complement(177070..177972) 1 NC_015581.1 KEGG: tcx:Tcr_2126 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 177972 10718975 Thicy_0181 Thioalkalimicrobium cyclicum ALM1 MerR family transcriptional regulator YP_004536436.1 177070 R 717773 CDS YP_004536437.1 334143281 10718976 complement(177969..179405) 1 NC_015581.1 KEGG: tcx:Tcr_2125 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase 179405 10718976 Thicy_0182 Thioalkalimicrobium cyclicum ALM1 deoxyribodipyrimidine photo-lyase YP_004536437.1 177969 R 717773 CDS YP_004536438.1 334143282 10718977 complement(179406..179915) 1 NC_015581.1 KEGG: tgr:Tgr7_1384 hypothetical protein; hypothetical protein 179915 10718977 Thicy_0183 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536438.1 179406 R 717773 CDS YP_004536439.1 334143283 10718978 complement(179912..180454) 1 NC_015581.1 KEGG: hse:Hsero_1057 lipoprotein; lipoprotein 180454 10718978 Thicy_0184 Thioalkalimicrobium cyclicum ALM1 lipoprotein YP_004536439.1 179912 R 717773 CDS YP_004536440.1 334143284 10718979 complement(180441..181670) 1 NC_015581.1 KEGG: tgr:Tgr7_1388 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 181670 10718979 Thicy_0185 Thioalkalimicrobium cyclicum ALM1 cyclopropane-fatty-acyl-phospholipid synthase YP_004536440.1 180441 R 717773 CDS YP_004536441.1 334143285 10718980 complement(181664..182449) 1 NC_015581.1 PFAM: Protein of unknown function DUF1365; KEGG: tgr:Tgr7_1389 hypothetical protein; hypothetical protein 182449 10718980 Thicy_0186 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536441.1 181664 R 717773 CDS YP_004536442.1 334143286 10718981 complement(182449..183732) 1 NC_015581.1 PFAM: FAD dependent oxidoreductase; KEGG: hna:Hneap_1890 amine oxidase; FAD dependent oxidoreductase 183732 10718981 Thicy_0187 Thioalkalimicrobium cyclicum ALM1 FAD dependent oxidoreductase YP_004536442.1 182449 R 717773 CDS YP_004536443.1 334143287 10718982 183798..184604 1 NC_015581.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: abu:Abu_1209 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 184604 10718982 Thicy_0188 Thioalkalimicrobium cyclicum ALM1 short-chain dehydrogenase/reductase SDR YP_004536443.1 183798 D 717773 CDS YP_004536444.1 334143288 10718983 184601..185101 1 NC_015581.1 KEGG: pna:Pnap_1456 hypothetical protein; hypothetical protein 185101 10718983 Thicy_0189 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536444.1 184601 D 717773 CDS YP_004536445.1 334143289 10718984 185102..186358 1 NC_015581.1 KEGG: tgr:Tgr7_1387 major facilitator superfamily transport protein; major facilitator superfamily transport protein 186358 10718984 Thicy_0190 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily transport protein YP_004536445.1 185102 D 717773 CDS YP_004536446.1 334143290 10718985 complement(186385..187185) 1 NC_015581.1 PFAM: ABC-3; KEGG: tcx:Tcr_0575 hypothetical protein; ABC transporter permease 187185 10718985 Thicy_0191 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004536446.1 186385 R 717773 CDS YP_004536447.1 334143291 10718986 complement(187178..187939) 1 NC_015581.1 KEGG: asa:ASA_0557 ABC-type high-affinity zinc transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 187939 10718986 Thicy_0192 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004536447.1 187178 R 717773 CDS YP_004536448.1 334143292 10718987 187971..188948 1 NC_015581.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: tcx:Tcr_0577 periplasmic solute binding protein; heavy metal ABC transporter substrate-binding protein 188948 10718987 Thicy_0193 Thioalkalimicrobium cyclicum ALM1 heavy metal ABC transporter substrate-binding protein YP_004536448.1 187971 D 717773 CDS YP_004536449.1 334143293 10718988 188932..189684 1 NC_015581.1 hypothetical protein 189684 10718988 Thicy_0194 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536449.1 188932 D 717773 CDS YP_004536450.1 334143294 10718989 189730..191208 1 NC_015581.1 KEGG: tcx:Tcr_0579 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 191208 10718989 Thicy_0195 Thioalkalimicrobium cyclicum ALM1 FeS assembly protein SufB YP_004536450.1 189730 D 717773 CDS YP_004536451.1 334143295 10718990 191287..192045 1 NC_015581.1 TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: tcx:Tcr_0580 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 192045 10718990 Thicy_0196 Thioalkalimicrobium cyclicum ALM1 FeS assembly ATPase SufC YP_004536451.1 191287 D 717773 CDS YP_004536452.1 334143296 10718991 192011..193351 1 NC_015581.1 KEGG: tcx:Tcr_0581 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 193351 10718991 Thicy_0197 Thioalkalimicrobium cyclicum ALM1 FeS assembly protein SufD YP_004536452.1 192011 D 717773 CDS YP_004536453.1 334143297 10718992 193374..194591 1 NC_015581.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: tcx:Tcr_0582 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 194591 10718992 Thicy_0198 Thioalkalimicrobium cyclicum ALM1 SufS subfamily cysteine desulfurase YP_004536453.1 193374 D 717773 CDS YP_004536454.1 334143298 10718993 194665..196038 1 NC_015581.1 PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: tcx:Tcr_0584 UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 196038 10718993 Thicy_0199 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylmuramate--L-alanine ligase YP_004536454.1 194665 D 717773 CDS YP_004536455.1 334143299 10718994 196044..196997 1 NC_015581.1 PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: tcx:Tcr_0585 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 196997 10718994 Thicy_0200 Thioalkalimicrobium cyclicum ALM1 D-alanine--D-alanine ligase YP_004536455.1 196044 D 717773 CDS YP_004536456.1 334143300 10718995 196978..197709 1 NC_015581.1 PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: tcx:Tcr_0586 cell division protein FtsQ; Polypeptide-transport-associated domain-containing protein FtsQ-type 197709 10718995 Thicy_0201 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein FtsQ-type YP_004536456.1 196978 D 717773 CDS YP_004536457.1 334143301 10718996 197717..198961 1 NC_015581.1 KEGG: tcx:Tcr_0587 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; cell division protein FtsA 198961 10718996 Thicy_0202 Thioalkalimicrobium cyclicum ALM1 cell division protein FtsA YP_004536457.1 197717 D 717773 CDS YP_004536458.1 334143302 10718997 198982..199893 1 NC_015581.1 TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: tcx:Tcr_0588 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 199893 10718997 Thicy_0203 Thioalkalimicrobium cyclicum ALM1 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase YP_004536458.1 198982 D 717773 CDS YP_004536459.1 334143303 10718998 complement(199901..200332) 1 NC_015581.1 hypothetical protein 200332 10718998 Thicy_0204 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536459.1 199901 R 717773 CDS YP_004536460.1 334143304 10718999 200422..203178 1 NC_015581.1 TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: tcx:Tcr_0589 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif; protein translocase subunit secA 203178 10718999 Thicy_0205 Thioalkalimicrobium cyclicum ALM1 protein translocase subunit secA YP_004536460.1 200422 D 717773 CDS YP_004536461.1 334143305 10719000 203201..204424 1 NC_015581.1 PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: tcx:Tcr_0590 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; arginine biosynthesis bifunctional protein ArgJ 204424 10719000 Thicy_0206 Thioalkalimicrobium cyclicum ALM1 arginine biosynthesis bifunctional protein ArgJ YP_004536461.1 203201 D 717773 CDS YP_004536462.1 334143306 10719001 204425..205384 1 NC_015581.1 PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: tcx:Tcr_0592 hypothetical protein; thiamine monophosphate synthase 205384 10719001 Thicy_0207 Thioalkalimicrobium cyclicum ALM1 thiamine monophosphate synthase YP_004536462.1 204425 D 717773 CDS YP_004536463.1 334143307 10719002 complement(205381..205989) 1 NC_015581.1 TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: tcx:Tcr_0594 dephospho-CoA kinase; dephospho-CoA kinase 205989 10719002 Thicy_0208 Thioalkalimicrobium cyclicum ALM1 dephospho-CoA kinase YP_004536463.1 205381 R 717773 CDS YP_004536464.1 334143308 10719003 complement(205986..206273) 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: aco:Amico_0081 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 206273 10719003 Thicy_0209 Thioalkalimicrobium cyclicum ALM1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004536464.1 205986 R 717773 CDS YP_004536465.1 334143309 10719004 206328..208136 1 NC_015581.1 TIGRFAM: Asparagine synthase family amidotransferase; Asparagine synthase, glutamine-hydrolyzing; KEGG: tcx:Tcr_0595 asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase family amidotransferase 208136 10719004 Thicy_0210 Thioalkalimicrobium cyclicum ALM1 asparagine synthase family amidotransferase YP_004536465.1 206328 D 717773 CDS YP_004536466.1 334143310 10719005 208202..208552 1 NC_015581.1 KEGG: tcx:Tcr_0596 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; glutaredoxin-like protein 208552 10719005 Thicy_0211 Thioalkalimicrobium cyclicum ALM1 glutaredoxin-like protein YP_004536466.1 208202 D 717773 CDS YP_004536467.1 334143311 10719006 complement(208582..209223) 1 NC_015581.1 SMART: Exonuclease; TIGRFAM: Ribonuclease T; KEGG: tcx:Tcr_0597 ribonuclease T; HAMAP: Ribonuclease T; PFAM: Exonuclease, RNase T/DNA polymerase III; Ribonuclease T 209223 10719006 Thicy_0212 Thioalkalimicrobium cyclicum ALM1 Ribonuclease T YP_004536467.1 208582 R 717773 CDS YP_004536468.1 334143312 10719007 complement(209220..210503) 1 NC_015581.1 KEGG: tcx:Tcr_0598 N-acetylglutamate synthase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: GCN5-related N-acetyltransferase; Aspartate/glutamate/uridylate kinase; amino-acid N-acetyltransferase 210503 10719007 Thicy_0213 Thioalkalimicrobium cyclicum ALM1 amino-acid N-acetyltransferase YP_004536468.1 209220 R 717773 CDS YP_004536469.1 334143313 10719008 210622..212526 1 NC_015581.1 PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: tcx:Tcr_0599 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 212526 10719008 Thicy_0214 Thioalkalimicrobium cyclicum ALM1 dihydroxy-acid dehydratase YP_004536469.1 210622 D 717773 CDS YP_004536470.1 334143314 10719009 212539..212937 1 NC_015581.1 KEGG: tcx:Tcr_0600 hypothetical protein; hypothetical protein 212937 10719009 Thicy_0215 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536470.1 212539 D 717773 CDS YP_004536471.1 334143315 10719010 complement(213025..213888) 1 NC_015581.1 KEGG: tcx:Tcr_0601 sulfur oxidation protein SoxA; sulfur oxidation protein SoxA 213888 10719010 Thicy_0216 Thioalkalimicrobium cyclicum ALM1 sulfur oxidation protein SoxA YP_004536471.1 213025 R 717773 CDS YP_004536472.1 334143316 10719011 complement(213982..214293) 1 NC_015581.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: tcx:Tcr_0602 hypothetical protein; sulfur oxidation protein SoxZ 214293 10719011 Thicy_0217 Thioalkalimicrobium cyclicum ALM1 sulfur oxidation protein SoxZ YP_004536472.1 213982 R 717773 CDS YP_004536473.1 334143317 10719012 complement(214353..214820) 1 NC_015581.1 KEGG: tcx:Tcr_0603 sulfur oxidation protein SoxY-like; sulfur oxidation protein SoxY-like protein 214820 10719012 Thicy_0218 Thioalkalimicrobium cyclicum ALM1 sulfur oxidation protein SoxY-like protein YP_004536473.1 214353 R 717773 CDS YP_004536474.1 334143318 10719013 complement(214850..215233) 1 NC_015581.1 KEGG: tcx:Tcr_0604 cytochrome c, class I; cytochrome c, class I 215233 10719013 Thicy_0219 Thioalkalimicrobium cyclicum ALM1 cytochrome c, class I YP_004536474.1 214850 R 717773 CDS YP_004536475.1 334143319 10719014 complement(215443..216819) 1 NC_015581.1 PFAM: Peptidase M48, Ste24p; KEGG: tcx:Tcr_0605 peptidase M48, Ste24p; peptidase M48 Ste24p 216819 10719014 Thicy_0220 Thioalkalimicrobium cyclicum ALM1 peptidase M48 Ste24p YP_004536475.1 215443 R 717773 CDS YP_004536476.1 334143320 10719015 216883..217098 1 NC_015581.1 PFAM: SirA-like; KEGG: cvi:CV_4331 hypothetical protein; SirA-like domain-containing protein 217098 10719015 Thicy_0221 Thioalkalimicrobium cyclicum ALM1 SirA-like domain-containing protein YP_004536476.1 216883 D 717773 CDS YP_004536477.1 334143321 10719016 217151..218035 1 NC_015581.1 TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: tcx:Tcr_0607 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 218035 10719016 Thicy_0222 Thioalkalimicrobium cyclicum ALM1 UTP-glucose-1-phosphate uridylyltransferase YP_004536477.1 217151 D 717773 CDS YP_004536478.1 334143322 10719017 218073..219707 1 NC_015581.1 HAMAP: Phosphoglucose isomerase (PGI); KEGG: tcx:Tcr_0608 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 219707 10719017 Thicy_0223 Thioalkalimicrobium cyclicum ALM1 glucose-6-phosphate isomerase YP_004536478.1 218073 D 717773 CDS YP_004536479.1 334143323 10719018 219709..221019 1 NC_015581.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: tcx:Tcr_0609 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 221019 10719018 Thicy_0224 Thioalkalimicrobium cyclicum ALM1 nucleotide sugar dehydrogenase YP_004536479.1 219709 D 717773 CDS YP_004536480.1 334143324 10719019 221028..221789 1 NC_015581.1 KEGG: tcx:Tcr_0610 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 221789 10719019 Thicy_0225 Thioalkalimicrobium cyclicum ALM1 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_004536480.1 221028 D 717773 CDS YP_004536481.1 334143325 10719020 221860..223410 1 NC_015581.1 TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: tcx:Tcr_0611 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 223410 10719020 Thicy_0226 Thioalkalimicrobium cyclicum ALM1 2-isopropylmalate synthase YP_004536481.1 221860 D 717773 CDS YP_004536482.1 334143326 10719021 223535..223936 1 NC_015581.1 hypothetical protein 223936 10719021 Thicy_0227 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536482.1 223535 D 717773 CDS YP_004536483.1 334143327 10719022 223944..224441 1 NC_015581.1 KEGG: mei:Msip34_2285 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 224441 10719022 Thicy_0228 Thioalkalimicrobium cyclicum ALM1 ribosomal-protein-alanine acetyltransferase YP_004536483.1 223944 D 717773 CDS YP_004536484.1 334143328 10719023 complement(224438..225283) 1 NC_015581.1 PFAM: Inositol monophosphatase; KEGG: tcx:Tcr_0614 inositol monophosphatase; inositol monophosphatase 225283 10719023 Thicy_0229 Thioalkalimicrobium cyclicum ALM1 inositol monophosphatase YP_004536484.1 224438 R 717773 CDS YP_004536485.1 334143329 10719024 225344..226084 1 NC_015581.1 KEGG: tcx:Tcr_0615 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase 226084 10719024 Thicy_0230 Thioalkalimicrobium cyclicum ALM1 TrmH family RNA methyltransferase YP_004536485.1 225344 D 717773 CDS YP_004536486.1 334143330 10719025 226094..226882 1 NC_015581.1 KEGG: tcx:Tcr_0616 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase; serine O-acetyltransferase 226882 10719025 Thicy_0231 Thioalkalimicrobium cyclicum ALM1 serine O-acetyltransferase YP_004536486.1 226094 D 717773 CDS YP_004536487.1 334143331 10719026 226941..227378 1 NC_015581.1 KEGG: tcx:Tcr_0617 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator 227378 10719026 Thicy_0232 Thioalkalimicrobium cyclicum ALM1 BadM/Rrf2 family transcriptional regulator YP_004536487.1 226941 D 717773 CDS YP_004536488.1 334143332 10719027 227392..227718 1 NC_015581.1 KEGG: tcx:Tcr_0618 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 227718 10719027 Thicy_0233 Thioalkalimicrobium cyclicum ALM1 iron-sulfur cluster assembly accessory protein YP_004536488.1 227392 D 717773 CDS YP_004536489.1 334143333 10719028 227824..228228 1 NC_015581.1 SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: pin:Ping_3326 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; nucleoside diphosphate kinase 228228 10719028 Thicy_0234 Thioalkalimicrobium cyclicum ALM1 nucleoside diphosphate kinase YP_004536489.1 227824 D 717773 CDS YP_004536490.1 334143334 10719029 228240..229397 1 NC_015581.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: tcx:Tcr_0620 hypothetical protein; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N 229397 10719029 Thicy_0235 Thioalkalimicrobium cyclicum ALM1 ribosomal RNA large subunit methyltransferase N YP_004536490.1 228240 D 717773 CDS YP_004536491.1 334143335 10719030 229402..229794 1 NC_015581.1 KEGG: tcx:Tcr_0621 hypothetical protein; hypothetical protein 229794 10719030 Thicy_0236 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536491.1 229402 D 717773 CDS YP_004536492.1 334143336 10719031 229815..231083 1 NC_015581.1 PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: tcx:Tcr_0622 histidyl-tRNA synthetase; histidyl-tRNA synthetase 231083 10719031 Thicy_0237 Thioalkalimicrobium cyclicum ALM1 histidyl-tRNA synthetase YP_004536492.1 229815 D 717773 CDS YP_004536493.1 334143337 10719032 231087..231728 1 NC_015581.1 PFAM: Protein of unknown function DUF2133; Tetratricopeptide TPR-4; KEGG: tcx:Tcr_0623 hypothetical protein; hypothetical protein 231728 10719032 Thicy_0238 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536493.1 231087 D 717773 CDS YP_004536494.1 334143338 10719033 231725..232951 1 NC_015581.1 KEGG: tcx:Tcr_0624 pyrrolo-quinoline quinone; TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; outer membrane assembly lipoprotein YfgL 232951 10719033 Thicy_0239 Thioalkalimicrobium cyclicum ALM1 outer membrane assembly lipoprotein YfgL YP_004536494.1 231725 D 717773 CDS YP_004536495.1 334143339 10719034 232944..234371 1 NC_015581.1 TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: tcx:Tcr_0625 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA 234371 10719034 Thicy_0240 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein engA YP_004536495.1 232944 D 717773 CDS YP_004536496.1 334143340 10719035 234470..238330 1 NC_015581.1 PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; KEGG: tgr:Tgr7_2778 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 238330 10719035 Thicy_0241 Thioalkalimicrobium cyclicum ALM1 FAD linked oxidase domain-containing protein YP_004536496.1 234470 D 717773 CDS YP_004536497.1 334143341 10719036 complement(238409..238720) 1 NC_015581.1 PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_0628 cytochrome c, class I; cytochrome c class I 238720 10719036 Thicy_0242 Thioalkalimicrobium cyclicum ALM1 cytochrome c class I YP_004536497.1 238409 R 717773 CDS YP_004536498.1 334143342 10719037 complement(238806..239111) 1 NC_015581.1 PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_0629 cytochrome c, class I; cytochrome c class I 239111 10719037 Thicy_0243 Thioalkalimicrobium cyclicum ALM1 cytochrome c class I YP_004536498.1 238806 R 717773 CDS YP_004536499.1 334143343 10719038 239328..239501 1 NC_015581.1 hypothetical protein 239501 10719038 Thicy_0244 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536499.1 239328 D 717773 CDS YP_004536500.1 334143344 10719039 complement(239466..240482) 1 NC_015581.1 TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: tcx:Tcr_0630 GTPase EngC; PFAM: GTPase EngC; ribosome biogenesis GTPase RsgA 240482 10719039 Thicy_0245 Thioalkalimicrobium cyclicum ALM1 ribosome biogenesis GTPase RsgA YP_004536500.1 239466 R 717773 CDS YP_004536501.1 334143345 10719040 complement(240491..240832) 1 NC_015581.1 KEGG: tcx:Tcr_0631 transcriptional coactivator/pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; pterin-4-alpha-carbinolamine dehydratase 240832 10719040 Thicy_0246 Thioalkalimicrobium cyclicum ALM1 pterin-4-alpha-carbinolamine dehydratase YP_004536501.1 240491 R 717773 CDS YP_004536502.1 334143346 10719041 complement(240845..242107) 1 NC_015581.1 KEGG: tcx:Tcr_0632 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p; Ste24 endopeptidase 242107 10719041 Thicy_0247 Thioalkalimicrobium cyclicum ALM1 Ste24 endopeptidase YP_004536502.1 240845 R 717773 CDS YP_004536503.1 334143347 10719042 242213..242758 1 NC_015581.1 HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: tcx:Tcr_0633 oligoribonuclease; SMART: Exonuclease; oligoribonuclease 242758 10719042 Thicy_0248 Thioalkalimicrobium cyclicum ALM1 oligoribonuclease YP_004536503.1 242213 D 717773 CDS YP_004536504.1 334143348 10719043 242926..244623 1 NC_015581.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: tcx:Tcr_0634 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase large subunit, biosynthetic type 244623 10719043 Thicy_0249 Thioalkalimicrobium cyclicum ALM1 acetolactate synthase large subunit, biosynthetic type YP_004536504.1 242926 D 717773 CDS YP_004536505.1 334143349 10719044 244629..245120 1 NC_015581.1 manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: tcx:Tcr_0635 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit 245120 10719044 Thicy_0250 Thioalkalimicrobium cyclicum ALM1 acetolactate synthase small subunit YP_004536505.1 244629 D 717773 CDS YP_004536506.1 334143350 10719045 245219..246235 1 NC_015581.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: tcx:Tcr_0636 ketol-acid reductoisomerase; ketol-acid reductoisomerase 246235 10719045 Thicy_0251 Thioalkalimicrobium cyclicum ALM1 ketol-acid reductoisomerase YP_004536506.1 245219 D 717773 CDS YP_004536507.1 334143351 10719046 complement(246289..247698) 1 NC_015581.1 TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 2; KEGG: tcx:Tcr_1958 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 247698 10719046 Thicy_0252 Thioalkalimicrobium cyclicum ALM1 glutamate synthase, small subunit YP_004536507.1 246289 R 717773 CDS YP_004536508.1 334143352 10719047 complement(247712..252187) 1 NC_015581.1 KEGG: tcx:Tcr_1957 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; glutamate synthase 252187 10719047 Thicy_0253 Thioalkalimicrobium cyclicum ALM1 glutamate synthase YP_004536508.1 247712 R 717773 CDS YP_004536509.1 334143353 10719048 252533..253882 1 NC_015581.1 KEGG: maq:Maqu_0302 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; glutamate dehydrogenase 253882 10719048 Thicy_0254 Thioalkalimicrobium cyclicum ALM1 glutamate dehydrogenase YP_004536509.1 252533 D 717773 CDS YP_004536510.1 334143354 10719049 complement(253970..255523) 1 NC_015581.1 PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: tcx:Tcr_1956 phosphoglyceromutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 255523 10719049 Thicy_0255 Thioalkalimicrobium cyclicum ALM1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004536510.1 253970 R 717773 CDS YP_004536511.1 334143355 10719050 255631..256086 1 NC_015581.1 KEGG: tcx:Tcr_1955 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 256086 10719050 Thicy_0256 Thioalkalimicrobium cyclicum ALM1 rhodanese-like protein YP_004536511.1 255631 D 717773 CDS YP_004536512.1 334143356 10719051 256083..256346 1 NC_015581.1 KEGG: grxC; glutaredoxin; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 256346 10719051 Thicy_0257 Thioalkalimicrobium cyclicum ALM1 glutaredoxin 3 YP_004536512.1 256083 D 717773 CDS YP_004536513.1 334143357 10719052 256348..256830 1 NC_015581.1 TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: tcx:Tcr_1953 protein-export protein SecB; PFAM: Bacterial protein export chaperone SecB; protein-export protein secB 256830 10719052 Thicy_0258 Thioalkalimicrobium cyclicum ALM1 protein-export protein secB YP_004536513.1 256348 D 717773 CDS YP_004536514.1 334143358 10719053 256867..257877 1 NC_015581.1 KEGG: tcx:Tcr_1952 glycerol-3-phosphate dehydrogenase (NAD(P)+); HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; glycerol-3-phosphate dehydrogenase 257877 10719053 Thicy_0259 Thioalkalimicrobium cyclicum ALM1 glycerol-3-phosphate dehydrogenase YP_004536514.1 256867 D 717773 CDS YP_004536515.1 334143359 10719054 complement(257880..258353) 1 NC_015581.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: tcx:Tcr_1951 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 258353 10719054 Thicy_0260 Thioalkalimicrobium cyclicum ALM1 tRNA/rRNA methyltransferase SpoU YP_004536515.1 257880 R 717773 CDS YP_004536516.1 334143360 10719055 258370..259317 1 NC_015581.1 KEGG: tcx:Tcr_1950 dihydroorotate dehydrogenase family protein; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; dihydroorotate dehydrogenase family protein 259317 10719055 Thicy_0261 Thioalkalimicrobium cyclicum ALM1 dihydroorotate dehydrogenase family protein YP_004536516.1 258370 D 717773 CDS YP_004536517.1 334143361 10719056 259342..260532 1 NC_015581.1 SMART: RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: tcx:Tcr_1949 tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; tyrosyl-tRNA synthetase 260532 10719056 Thicy_0262 Thioalkalimicrobium cyclicum ALM1 tyrosyl-tRNA synthetase YP_004536517.1 259342 D 717773 CDS YP_004536518.1 334143362 10719062 266463..267284 1 NC_015581.1 KEGG: tcx:Tcr_1948 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; biotin-(acetyl-CoA carboxylase) ligase 267284 10719062 Thicy_0263 Thioalkalimicrobium cyclicum ALM1 biotin-(acetyl-CoA carboxylase) ligase YP_004536518.1 266463 D 717773 CDS YP_004536519.1 334143363 10719063 267271..268098 1 NC_015581.1 TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: gpb:HDN1F_08070 putative transcriptional regulator; PFAM: Bordetella pertussis Bvg accessory factor; putative Baf family transcriptional acitvator 268098 10719063 Thicy_0264 Thioalkalimicrobium cyclicum ALM1 putative Baf family transcriptional acitvator YP_004536519.1 267271 D 717773 CDS YP_004536520.1 334143364 10719065 268374..268889 1 NC_015581.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: tcx:Tcr_1946 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; 3-hydroxydecanoyl-ACP dehydratase 268889 10719065 Thicy_0265 Thioalkalimicrobium cyclicum ALM1 3-hydroxydecanoyl-ACP dehydratase YP_004536520.1 268374 D 717773 CDS YP_004536521.1 334143365 10719066 268891..270111 1 NC_015581.1 KEGG: tcx:Tcr_1945 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-ketoacyl-ACP synthase I 270111 10719066 Thicy_0266 Thioalkalimicrobium cyclicum ALM1 3-ketoacyl-ACP synthase I YP_004536521.1 268891 D 717773 CDS YP_004536522.1 334143366 10719067 complement(270221..270847) 1 NC_015581.1 KEGG: tcx:Tcr_1944 hypothetical protein; hypothetical protein 270847 10719067 Thicy_0267 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536522.1 270221 R 717773 CDS YP_004536523.1 334143367 10719068 complement(270957..272003) 1 NC_015581.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: tcx:Tcr_1942 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY 272003 10719068 Thicy_0268 Thioalkalimicrobium cyclicum ALM1 signal recognition particle-docking protein FtsY YP_004536523.1 270957 R 717773 CDS YP_004536524.1 334143368 10719069 272119..273498 1 NC_015581.1 KEGG: tcx:Tcr_1941 peptidase M16-like; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; processing peptidase 273498 10719069 Thicy_0269 Thioalkalimicrobium cyclicum ALM1 processing peptidase YP_004536524.1 272119 D 717773 CDS YP_004536525.1 334143369 10719070 273498..274850 1 NC_015581.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: tcx:Tcr_1940 peptidase M16-like; peptidase M16 domain-containing protein 274850 10719070 Thicy_0270 Thioalkalimicrobium cyclicum ALM1 peptidase M16 domain-containing protein YP_004536525.1 273498 D 717773 CDS YP_004536526.1 334143370 10719071 274837..275484 1 NC_015581.1 TIGRFAM: Conserved hypothetical protein CHP00095; KEGG: tcx:Tcr_1932 hypothetical protein; PFAM: Protein of unknown function methylase putative; methyltransferase 275484 10719071 Thicy_0271 Thioalkalimicrobium cyclicum ALM1 methyltransferase YP_004536526.1 274837 D 717773 CDS YP_004536527.1 334143371 10719072 275530..276012 1 NC_015581.1 PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: tcx:Tcr_1930 coenzyme A biosynthesis protein; phosphopantetheine adenylyltransferase 276012 10719072 Thicy_0272 Thioalkalimicrobium cyclicum ALM1 phosphopantetheine adenylyltransferase YP_004536527.1 275530 D 717773 CDS YP_004536528.1 334143372 10719073 complement(276002..276781) 1 NC_015581.1 KEGG: tcx:Tcr_0042 hypothetical protein; hypothetical protein 276781 10719073 Thicy_0273 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536528.1 276002 R 717773 CDS YP_004536529.1 334143373 10719074 276978..277463 1 NC_015581.1 KEGG: tcx:Tcr_1902 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520; hypothetical protein 277463 10719074 Thicy_0274 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536529.1 276978 D 717773 CDS YP_004536530.1 334143374 10719075 277478..278392 1 NC_015581.1 TIGRFAM: Acetylglutamate kinase; KEGG: tcx:Tcr_1899 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 278392 10719075 Thicy_0275 Thioalkalimicrobium cyclicum ALM1 acetylglutamate kinase YP_004536530.1 277478 D 717773 CDS YP_004536531.1 334143375 10719076 278567..279337 1 NC_015581.1 PFAM: Protein of unknown function DUF81; KEGG: tcx:Tcr_1898 hypothetical protein; hypothetical protein 279337 10719076 Thicy_0276 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536531.1 278567 D 717773 CDS YP_004536532.1 334143376 10719077 complement(279321..279965) 1 NC_015581.1 PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: tcx:Tcr_1895 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 279965 10719077 Thicy_0277 Thioalkalimicrobium cyclicum ALM1 orotate phosphoribosyltransferase YP_004536532.1 279321 R 717773 CDS YP_004536533.1 334143377 10719078 280211..281311 1 NC_015581.1 KEGG: tcx:Tcr_1893 oxidoreductase FAD/NAD(P)-binding; PFAM: FAD-binding, type 1; Oxidoreductase FAD/NAD(P)-binding; NADPH--hemoprotein reductase 281311 10719078 Thicy_0278 Thioalkalimicrobium cyclicum ALM1 NADPH--hemoprotein reductase YP_004536533.1 280211 D 717773 CDS YP_004536534.1 334143378 10719079 complement(281305..282822) 1 NC_015581.1 TIGRFAM: exopolyphosphatase; KEGG: tcx:Tcr_1892 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 282822 10719079 Thicy_0279 Thioalkalimicrobium cyclicum ALM1 Ppx/GppA phosphatase YP_004536534.1 281305 R 717773 CDS YP_004536535.1 334143379 10719080 complement(282913..285060) 1 NC_015581.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: tcx:Tcr_1891 polyphosphate kinase; polyphosphate kinase 285060 10719080 Thicy_0280 Thioalkalimicrobium cyclicum ALM1 polyphosphate kinase YP_004536535.1 282913 R 717773 CDS YP_004536536.1 334143380 10719081 285220..286287 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0118; KEGG: tcx:Tcr_2070 hypothetical protein; hypothetical protein 286287 10719081 Thicy_0281 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536536.1 285220 D 717773 CDS YP_004536537.1 334143381 10719082 286421..288229 1 NC_015581.1 PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type 288229 10719082 Thicy_0282 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein ShlB-type YP_004536537.1 286421 D 717773 CDS YP_004536538.1 334143382 10719083 288288..289088 1 NC_015581.1 PFAM: SapC; KEGG: SapC-related protein; SapC family protein 289088 10719083 Thicy_0283 Thioalkalimicrobium cyclicum ALM1 SapC family protein YP_004536538.1 288288 D 717773 CDS YP_004536539.1 334143383 10719084 289185..289646 1 NC_015581.1 PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: pmy:Pmen_4378 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 289646 10719084 Thicy_0284 Thioalkalimicrobium cyclicum ALM1 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004536539.1 289185 D 717773 CDS YP_004536540.1 334143384 10719085 289823..377431 1 NC_015581.1 KEGG: dal:Dalk_0372 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; Protein of unknown function DUF11; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; Adenoviral fiber protein (repeat/shaft region); Bacterial transferase hexapeptide repeat; RtxA toxin; filamentous hemagglutinin family outer membrane protein 377431 10719085 Thicy_0285 Thioalkalimicrobium cyclicum ALM1 filamentous hemagglutinin family outer membrane protein YP_004536540.1 289823 D 717773 CDS YP_004536541.1 334143385 10719086 377494..378156 1 NC_015581.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: jan:Jann_2130 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 378156 10719086 Thicy_0286 Thioalkalimicrobium cyclicum ALM1 MotA/TolQ/ExbB proton channel YP_004536541.1 377494 D 717773 CDS YP_004536542.1 334143386 10719087 378173..378529 1 NC_015581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: jan:Jann_2129 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 378529 10719087 Thicy_0287 Thioalkalimicrobium cyclicum ALM1 biopolymer transport protein ExbD/TolR YP_004536542.1 378173 D 717773 CDS YP_004536543.1 334143387 10719088 378530..378913 1 NC_015581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: jan:Jann_2128 hypothetical protein; biopolymer transport protein ExbD/TolR 378913 10719088 Thicy_0288 Thioalkalimicrobium cyclicum ALM1 biopolymer transport protein ExbD/TolR YP_004536543.1 378530 D 717773 CDS YP_004536544.1 334143388 10719089 378914..379519 1 NC_015581.1 TIGRFAM: TonB, C-terminal; KEGG: aeh:Mlg_1845 TonB family protein; TonB family protein 379519 10719089 Thicy_0289 Thioalkalimicrobium cyclicum ALM1 TonB family protein YP_004536544.1 378914 D 717773 CDS YP_004536545.1 334143389 10719090 complement(379531..380007) 1 NC_015581.1 KEGG: tcx:Tcr_1922 hypothetical protein; hypothetical protein 380007 10719090 Thicy_0290 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536545.1 379531 R 717773 CDS YP_004536546.1 334143390 10719091 complement(380035..380865) 1 NC_015581.1 PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: tcx:Tcr_1921 formamidopyrimidine-DNA glycosylase; Formamidopyrimidine-DNA glycosylase 380865 10719091 Thicy_0291 Thioalkalimicrobium cyclicum ALM1 Formamidopyrimidine-DNA glycosylase YP_004536546.1 380035 R 717773 CDS YP_004536547.1 334143391 10719092 complement(380858..381718) 1 NC_015581.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0782 hypothetical protein; hypothetical protein 381718 10719092 Thicy_0292 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536547.1 380858 R 717773 CDS YP_004536548.1 334143392 10719093 381817..382548 1 NC_015581.1 KEGG: tcx:Tcr_1865 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; dihydrofolate reductase 382548 10719093 Thicy_0293 Thioalkalimicrobium cyclicum ALM1 dihydrofolate reductase YP_004536548.1 381817 D 717773 CDS YP_004536549.1 334143393 10719094 complement(382558..384243) 1 NC_015581.1 TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: tcx:Tcr_1715 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase 384243 10719094 Thicy_0294 Thioalkalimicrobium cyclicum ALM1 gamma-glutamyltransferase YP_004536549.1 382558 R 717773 CDS YP_004536550.1 334143394 10719095 384367..384753 1 NC_015581.1 TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: tcx:Tcr_1850 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 384753 10719095 Thicy_0295 Thioalkalimicrobium cyclicum ALM1 glycine cleavage system H protein YP_004536550.1 384367 D 717773 CDS YP_004536551.1 334143395 10719096 384746..385945 1 NC_015581.1 KEGG: tcx:Tcr_1849 methyltransferase small; PFAM: Methyltransferase small; SMART: Pseudouridine synthase/archaeosine transglycosylase; methyltransferase small 385945 10719096 Thicy_0296 Thioalkalimicrobium cyclicum ALM1 methyltransferase small YP_004536551.1 384746 D 717773 CDS YP_004536552.1 334143396 10719097 complement(385955..387325) 1 NC_015581.1 KEGG: tcx:Tcr_1887 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 387325 10719097 Thicy_0297 Thioalkalimicrobium cyclicum ALM1 succinate-semialdehyde dehydrogenase YP_004536552.1 385955 R 717773 CDS YP_004536553.1 334143397 10719098 complement(387336..388667) 1 NC_015581.1 KEGG: tcx:Tcr_1889 dihydroorotase; PFAM: Amidohydrolase 3; Allantoinase 388667 10719098 Thicy_0298 Thioalkalimicrobium cyclicum ALM1 Allantoinase YP_004536553.1 387336 R 717773 CDS YP_004536554.1 334143398 10719099 388949..389239 1 NC_015581.1 KEGG: mmw:Mmwyl1_4364 hypothetical protein; hypothetical protein 389239 10719099 Thicy_0299 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536554.1 388949 D 717773 CDS YP_004536555.1 334143399 10719100 389229..390569 1 NC_015581.1 PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: mmw:Mmwyl1_4363 HipA domain-containing protein; HipA domain-containing protein 390569 10719100 Thicy_0300 Thioalkalimicrobium cyclicum ALM1 HipA domain-containing protein YP_004536555.1 389229 D 717773 CDS YP_004536556.1 334143400 10719101 complement(390566..391258) 1 NC_015581.1 KEGG: bge:BC1002_0486 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein 391258 10719101 Thicy_0301 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536556.1 390566 R 717773 CDS YP_004536557.1 334143401 10719102 391386..392180 1 NC_015581.1 KEGG: tcx:Tcr_1833 hypothetical protein; TIGRFAM: polyphosphate kinase 2; PFAM: Polyphosphate kinase 2; polyphosphate kinase 2 392180 10719102 Thicy_0302 Thioalkalimicrobium cyclicum ALM1 polyphosphate kinase 2 YP_004536557.1 391386 D 717773 CDS YP_004536558.1 334143402 10719103 392211..392438 1 NC_015581.1 KEGG: tcx:Tcr_1832 hypothetical protein; hypothetical protein 392438 10719103 Thicy_0303 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536558.1 392211 D 717773 CDS YP_004536559.1 334143403 10719104 392497..393654 1 NC_015581.1 KEGG: tcx:Tcr_0225 SoxH protein-like; SoxH protein-like protein 393654 10719104 Thicy_0304 Thioalkalimicrobium cyclicum ALM1 SoxH protein-like protein YP_004536559.1 392497 D 717773 CDS YP_004536560.1 334143404 10719105 complement(393655..394179) 1 NC_015581.1 KEGG: tcx:Tcr_0964 hypothetical protein; hypothetical protein 394179 10719105 Thicy_0305 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536560.1 393655 R 717773 CDS YP_004536561.1 334143405 10719106 complement(394190..395413) 1 NC_015581.1 PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0419 YeeE/YedE; hypothetical protein 395413 10719106 Thicy_0306 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536561.1 394190 R 717773 CDS YP_004536562.1 334143406 10719107 complement(395407..395742) 1 NC_015581.1 KEGG: ppd:Ppro_0863 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 395742 10719107 Thicy_0307 Thioalkalimicrobium cyclicum ALM1 ArsR family transcriptional regulator YP_004536562.1 395407 R 717773 CDS YP_004536563.1 334143407 10719108 395895..396917 1 NC_015581.1 KEGG: tgr:Tgr7_1924 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 396917 10719108 Thicy_0308 Thioalkalimicrobium cyclicum ALM1 glyceraldehyde-3-phosphate dehydrogenase YP_004536563.1 395895 D 717773 CDS YP_004536564.1 334143408 10719109 396917..398119 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_1866 major facilitator transporter; major facilitator superfamily protein 398119 10719109 Thicy_0309 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004536564.1 396917 D 717773 CDS YP_004536565.1 334143409 10719110 complement(398133..399254) 1 NC_015581.1 KEGG: tcx:Tcr_1769 HPr kinase; hypothetical protein 399254 10719110 Thicy_0310 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536565.1 398133 R 717773 CDS YP_004536566.1 334143410 10719111 complement(399263..400186) 1 NC_015581.1 PFAM: ATP-grasp fold, RimK-type; KEGG: pin:Ping_2322 RimK domain-containing protein ATP-grasp; RimK domain-containing protein ATP-grasp 400186 10719111 Thicy_0311 Thioalkalimicrobium cyclicum ALM1 RimK domain-containing protein ATP-grasp YP_004536566.1 399263 R 717773 CDS YP_004536567.1 334143411 10719112 complement(400173..401771) 1 NC_015581.1 PFAM: Aminoglycoside phosphotransferase; KEGG: tcx:Tcr_1767 hypothetical protein; aminoglycoside phosphotransferase 401771 10719112 Thicy_0312 Thioalkalimicrobium cyclicum ALM1 aminoglycoside phosphotransferase YP_004536567.1 400173 R 717773 CDS YP_004536568.1 334143412 10719113 complement(401768..402133) 1 NC_015581.1 KEGG: tcx:Tcr_1766 hypothetical protein; hypothetical protein 402133 10719113 Thicy_0313 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536568.1 401768 R 717773 CDS YP_004536569.1 334143413 10719114 402303..403118 1 NC_015581.1 TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: tcx:Tcr_0571 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 403118 10719114 Thicy_0314 Thioalkalimicrobium cyclicum ALM1 prolipoprotein diacylglyceryl transferase YP_004536569.1 402303 D 717773 CDS YP_004536570.1 334143414 10719115 403115..403948 1 NC_015581.1 PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: tcx:Tcr_0572 thymidylate synthase; Thymidylate synthase 403948 10719115 Thicy_0315 Thioalkalimicrobium cyclicum ALM1 Thymidylate synthase YP_004536570.1 403115 D 717773 CDS YP_004536571.1 334143415 10719116 403945..404475 1 NC_015581.1 KEGG: tcx:Tcr_0573 dihydrofolate reductase; PFAM: Dihydrofolate reductase region; dihydrofolate reductase 404475 10719116 Thicy_0316 Thioalkalimicrobium cyclicum ALM1 dihydrofolate reductase YP_004536571.1 403945 D 717773 CDS YP_004536572.1 334143416 10719117 complement(404472..404786) 1 NC_015581.1 KEGG: sil:SPO1232 H-NS family DNA-binding protein; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 404786 10719117 Thicy_0317 Thioalkalimicrobium cyclicum ALM1 histone family protein nucleoid-structuring protein H-NS YP_004536572.1 404472 R 717773 CDS YP_004536573.1 334143417 10719118 complement(405015..405737) 1 NC_015581.1 KEGG: tcx:Tcr_1831 hypothetical protein; hypothetical protein 405737 10719118 Thicy_0318 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536573.1 405015 R 717773 CDS YP_004536574.1 334143418 10719119 complement(405760..407055) 1 NC_015581.1 KEGG: tcx:Tcr_1830 dihydroorotase, multifunctional complex type; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 1; dihydroorotase, multifunctional complex type 407055 10719119 Thicy_0319 Thioalkalimicrobium cyclicum ALM1 dihydroorotase, multifunctional complex type YP_004536574.1 405760 R 717773 CDS YP_004536575.1 334143419 10719120 complement(407052..408092) 1 NC_015581.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: tcx:Tcr_1829 aspartate carbamoyltransferase; aspartate carbamoyltransferase 408092 10719120 Thicy_0320 Thioalkalimicrobium cyclicum ALM1 aspartate carbamoyltransferase YP_004536575.1 407052 R 717773 CDS YP_004536576.1 334143420 10719121 complement(408089..408598) 1 NC_015581.1 KEGG: maq:Maqu_3762 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Uracil phosphoribosyltransferase 408598 10719121 Thicy_0321 Thioalkalimicrobium cyclicum ALM1 Uracil phosphoribosyltransferase YP_004536576.1 408089 R 717773 CDS YP_004536577.1 334143421 10719122 complement(408595..409065) 1 NC_015581.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: tcx:Tcr_1828 Holliday junction resolvase YqgF; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 409065 10719122 Thicy_0322 Thioalkalimicrobium cyclicum ALM1 Holliday junction resolvase YP_004536577.1 408595 R 717773 CDS YP_004536578.1 334143422 10719123 complement(409058..409654) 1 NC_015581.1 KEGG: tcx:Tcr_1827 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein 409654 10719123 Thicy_0323 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536578.1 409058 R 717773 CDS YP_004536579.1 334143423 10719124 complement(409718..410761) 1 NC_015581.1 KEGG: tcx:Tcr_1826 ApbE-like lipoprotein; manually curated; PFAM: ApbE-like lipoprotein; ApbE family lipoprotein 410761 10719124 Thicy_0324 Thioalkalimicrobium cyclicum ALM1 ApbE family lipoprotein YP_004536579.1 409718 R 717773 CDS YP_004536580.1 334143424 10719125 complement(410766..411734) 1 NC_015581.1 PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: tcx:Tcr_1825 glutathione synthetase; glutathione synthetase 411734 10719125 Thicy_0325 Thioalkalimicrobium cyclicum ALM1 glutathione synthetase YP_004536580.1 410766 R 717773 CDS YP_004536581.1 334143425 10719126 411977..413425 1 NC_015581.1 PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: tkm:TK90_1676 protein of unknown function DUF404; hypothetical protein 413425 10719126 Thicy_0326 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536581.1 411977 D 717773 CDS YP_004536582.1 334143426 10719127 413415..414359 1 NC_015581.1 PFAM: Protein of unknown function DUF403, bacteria; KEGG: tkm:TK90_1675 protein of unknown function DUF403; hypothetical protein 414359 10719127 Thicy_0327 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536582.1 413415 D 717773 CDS YP_004536583.1 334143427 10719128 414395..415438 1 NC_015581.1 PFAM: Uncharacterised conserved protein UCP012641; KEGG: maq:Maqu_3036 hypothetical protein; hypothetical protein 415438 10719128 Thicy_0328 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536583.1 414395 D 717773 CDS YP_004536584.1 334143428 10719129 complement(415435..416868) 1 NC_015581.1 KEGG: tcx:Tcr_1817 hypothetical protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; YjeF-like protein 416868 10719129 Thicy_0329 Thioalkalimicrobium cyclicum ALM1 YjeF-like protein YP_004536584.1 415435 R 717773 CDS YP_004536585.1 334143429 10719130 complement(416971..417126) 1 NC_015581.1 TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: amc:MADE_00056 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 417126 10719130 Thicy_0330 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L33 YP_004536585.1 416971 R 717773 CDS YP_004536586.1 334143430 10719131 complement(417139..417375) 1 NC_015581.1 TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: tcx:Tcr_1918 ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 417375 10719131 Thicy_0331 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L28 YP_004536586.1 417139 R 717773 CDS YP_004536587.1 334143431 10719132 complement(417526..418203) 1 NC_015581.1 KEGG: tcx:Tcr_1917 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC 418203 10719132 Thicy_0332 Thioalkalimicrobium cyclicum ALM1 DNA repair protein RadC YP_004536587.1 417526 R 717773 CDS YP_004536588.1 334143432 10719133 complement(418249..418860) 1 NC_015581.1 KEGG: tcx:Tcr_1840 methionine biosynthesis MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW; methionine biosynthesis protein MetW 418860 10719133 Thicy_0333 Thioalkalimicrobium cyclicum ALM1 methionine biosynthesis protein MetW YP_004536588.1 418249 R 717773 CDS YP_004536589.1 334143433 10719134 complement(418857..419990) 1 NC_015581.1 PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: tcx:Tcr_1839 homoserine O-acetyltransferase; homoserine O-acetyltransferase 419990 10719134 Thicy_0334 Thioalkalimicrobium cyclicum ALM1 homoserine O-acetyltransferase YP_004536589.1 418857 R 717773 CDS YP_004536590.1 334143434 10719135 complement(420018..420587) 1 NC_015581.1 PFAM: Protein of unknown function YGGT; KEGG: tcx:Tcr_1838 hypothetical protein; hypothetical protein 420587 10719135 Thicy_0335 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536590.1 420018 R 717773 CDS YP_004536591.1 334143435 10719136 complement(420584..421411) 1 NC_015581.1 TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: tcx:Tcr_1837 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 421411 10719136 Thicy_0336 Thioalkalimicrobium cyclicum ALM1 pyrroline-5-carboxylate reductase YP_004536591.1 420584 R 717773 CDS YP_004536592.1 334143436 10719137 421492..421842 1 NC_015581.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: tcx:Tcr_1890 hypothetical protein; PFAM: Protein of unknown function DUF37; hypothetical protein 421842 10719137 Thicy_0337 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536592.1 421492 D 717773 CDS YP_004536593.1 334143437 10719138 complement(421981..422931) 1 NC_015581.1 KEGG: tcx:Tcr_1875 putative GTP cyclohydrolase; PFAM: Protein of unknown function DUF198; GTP cyclohydrolase I 422931 10719138 Thicy_0338 Thioalkalimicrobium cyclicum ALM1 GTP cyclohydrolase I YP_004536593.1 421981 R 717773 CDS YP_004536594.1 334143438 10719139 complement(423007..424089) 1 NC_015581.1 PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; KEGG: tcx:Tcr_1874 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K 424089 10719139 Thicy_0339 Thioalkalimicrobium cyclicum ALM1 cobalamin synthesis protein P47K YP_004536594.1 423007 R 717773 CDS YP_004536595.1 334143439 10719140 complement(424070..425419) 1 NC_015581.1 KEGG: tcx:Tcr_1873 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; malate dehydrogenase 425419 10719140 Thicy_0340 Thioalkalimicrobium cyclicum ALM1 malate dehydrogenase YP_004536595.1 424070 R 717773 CDS YP_004536596.1 334143440 10719141 complement(425503..425901) 1 NC_015581.1 KEGG: esa:ESA_04083 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 425901 10719141 Thicy_0341 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004536596.1 425503 R 717773 CDS YP_004536597.1 334143441 10719142 complement(426049..427095) 1 NC_015581.1 PFAM: Aldo/keto reductase; KEGG: tcx:Tcr_1541 aldo/keto reductase; aldo/keto reductase 427095 10719142 Thicy_0342 Thioalkalimicrobium cyclicum ALM1 aldo/keto reductase YP_004536597.1 426049 R 717773 CDS YP_004536598.1 334143442 10719143 complement(427123..427485) 1 NC_015581.1 PFAM: Protein of unknown function DUF2237; KEGG: chl:Chy400_3719 hypothetical protein; hypothetical protein 427485 10719143 Thicy_0343 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536598.1 427123 R 717773 CDS YP_004536599.1 334143443 10719144 complement(427544..428827) 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_2046 thiol-disulfide isomerase and thioredoxins-like; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 428827 10719144 Thicy_0344 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004536599.1 427544 R 717773 CDS YP_004536600.1 334143444 10719145 complement(428877..429641) 1 NC_015581.1 KEGG: tgr:Tgr7_3142 hypothetical protein; hypothetical protein 429641 10719145 Thicy_0345 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536600.1 428877 R 717773 CDS YP_004536601.1 334143445 10719146 429812..471352 1 NC_015581.1 PFAM: Filamentous haemagglutinin, bacterial; KEGG: cch:Cag_0616 parallel beta-helix repeat-containing protein; hemagluttinin repeat-containing protein 471352 10719146 Thicy_0346 Thioalkalimicrobium cyclicum ALM1 hemagluttinin repeat-containing protein YP_004536601.1 429812 D 717773 CDS YP_004536602.1 334143446 10719147 471468..472214 1 NC_015581.1 PFAM: SapC; KEGG: cch:Cag_0613 SapC-related protein; SapC family protein 472214 10719147 Thicy_0347 Thioalkalimicrobium cyclicum ALM1 SapC family protein YP_004536602.1 471468 D 717773 CDS YP_004536603.1 334143447 10719148 472286..473908 1 NC_015581.1 PFAM: Outer membrane efflux protein; KEGG: cch:Cag_0615 outer membrane protein-like; outer membrane efflux protein 473908 10719148 Thicy_0348 Thioalkalimicrobium cyclicum ALM1 outer membrane efflux protein YP_004536603.1 472286 D 717773 CDS YP_004536604.1 334143448 10719149 473936..474754 1 NC_015581.1 KEGG: cch:Cag_1409 membrane-fusion protein-like; hypothetical protein 474754 10719149 Thicy_0349 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536604.1 473936 D 717773 CDS YP_004536605.1 334143449 10719150 474804..484337 1 NC_015581.1 PFAM: Filamentous haemagglutinin, bacterial; KEGG: cch:Cag_0616 parallel beta-helix repeat-containing protein; hemagluttinin repeat-containing protein 484337 10719150 Thicy_0350 Thioalkalimicrobium cyclicum ALM1 hemagluttinin repeat-containing protein YP_004536605.1 474804 D 717773 CDS YP_004536606.1 334143450 10719151 484346..486178 1 NC_015581.1 PFAM: Biotin/lipoyl attachment; KEGG: cch:Cag_1408 membrane-fusion protein-like; biotin/lipoyl attachment domain-containing protein 486178 10719151 Thicy_0351 Thioalkalimicrobium cyclicum ALM1 biotin/lipoyl attachment domain-containing protein YP_004536606.1 484346 D 717773 CDS YP_004536607.1 334143451 10719152 486182..488326 1 NC_015581.1 PFAM: Secretion protein HlyD; KEGG: cch:Cag_1407 M50 family peptidase; secretion protein HlyD family protein 488326 10719152 Thicy_0352 Thioalkalimicrobium cyclicum ALM1 secretion protein HlyD family protein YP_004536607.1 486182 D 717773 CDS YP_004536608.1 334143452 10719153 488329..490284 1 NC_015581.1 PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; KEGG: cch:Cag_1563 preprotein translocase subunit SecA; SecA DEAD domain-containing protein 490284 10719153 Thicy_0353 Thioalkalimicrobium cyclicum ALM1 SecA DEAD domain-containing protein YP_004536608.1 488329 D 717773 CDS YP_004536609.1 334143453 10719154 complement(490347..492515) 1 NC_015581.1 PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: rsq:Rsph17025_3306 hypothetical protein; catalase-peroxidase 492515 10719154 Thicy_0354 Thioalkalimicrobium cyclicum ALM1 catalase-peroxidase YP_004536609.1 490347 R 717773 CDS YP_004536610.1 334143454 10719155 492774..495461 1 NC_015581.1 TIGRFAM: Peptidase M1, alanyl aminopeptidase; KEGG: tcx:Tcr_1485 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; aminopeptidase N 495461 10719155 Thicy_0355 Thioalkalimicrobium cyclicum ALM1 aminopeptidase N YP_004536610.1 492774 D 717773 CDS YP_004536611.1 334143455 10719156 495466..496818 1 NC_015581.1 KEGG: tcx:Tcr_1484 hypothetical protein; hypothetical protein 496818 10719156 Thicy_0356 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536611.1 495466 D 717773 CDS YP_004536612.1 334143456 10719157 complement(496834..498096) 1 NC_015581.1 PFAM: Phosphofructokinase; KEGG: tcx:Tcr_1583 6-phosphofructokinase; phosphofructokinase 498096 10719157 Thicy_0357 Thioalkalimicrobium cyclicum ALM1 phosphofructokinase YP_004536612.1 496834 R 717773 CDS YP_004536613.1 334143457 10719158 complement(498113..499279) 1 NC_015581.1 SMART: 3'-5' exonuclease; TIGRFAM: Ribonuclease D; KEGG: tcx:Tcr_1582 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; ribonuclease D 499279 10719158 Thicy_0358 Thioalkalimicrobium cyclicum ALM1 ribonuclease D YP_004536613.1 498113 R 717773 CDS YP_004536614.1 334143458 10719159 499492..500337 1 NC_015581.1 PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: tcx:Tcr_1998 integral membrane protein; hypothetical protein 500337 10719159 Thicy_0359 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536614.1 499492 D 717773 CDS YP_004536615.1 334143459 10719160 500434..501837 1 NC_015581.1 TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: tcx:Tcr_1581 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 501837 10719160 Thicy_0360 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_004536615.1 500434 D 717773 CDS YP_004536616.1 334143460 10719161 501860..502153 1 NC_015581.1 KEGG: tcx:Tcr_1220 hypothetical protein; hypothetical protein 502153 10719161 Thicy_0361 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536616.1 501860 D 717773 CDS YP_004536617.1 334143461 10719162 502147..504333 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_0601 TonB-dependent receptor; TonB-dependent receptor 504333 10719162 Thicy_0362 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004536617.1 502147 D 717773 CDS YP_004536618.1 334143462 10719163 complement(504305..505963) 1 NC_015581.1 KEGG: tcx:Tcr_0400 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1; 2-polyprenylphenol 6-hydroxylase 505963 10719163 Thicy_0363 Thioalkalimicrobium cyclicum ALM1 2-polyprenylphenol 6-hydroxylase YP_004536618.1 504305 R 717773 CDS YP_004536619.1 334143463 10719165 complement(506275..507033) 1 NC_015581.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: tcx:Tcr_0402 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE 507033 10719165 Thicy_0365 Thioalkalimicrobium cyclicum ALM1 ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_004536619.1 506275 R 717773 CDS YP_004536620.1 334143464 10719166 complement(507030..507419) 1 NC_015581.1 PFAM: Protein of unknown function DUF971; KEGG: tcx:Tcr_0403 hypothetical protein; hypothetical protein 507419 10719166 Thicy_0366 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536620.1 507030 R 717773 CDS YP_004536621.1 334143465 10719167 complement(507438..508757) 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: tcx:Tcr_0404 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU 508757 10719167 Thicy_0367 Thioalkalimicrobium cyclicum ALM1 ATP-dependent hsl protease ATP-binding subunit hslU YP_004536621.1 507438 R 717773 CDS YP_004536622.1 334143466 10719168 508932..509987 1 NC_015581.1 TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase; KEGG: sua:Saut_0247 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; Selenide, water dikinase 509987 10719168 Thicy_0368 Thioalkalimicrobium cyclicum ALM1 Selenide, water dikinase YP_004536622.1 508932 D 717773 CDS YP_004536623.1 334143467 10719169 509987..511084 1 NC_015581.1 TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: tcx:Tcr_1023 tRNA 2-selenouridine synthase; SMART: Rhodanese-like; tRNA 2-selenouridine synthase 511084 10719169 Thicy_0369 Thioalkalimicrobium cyclicum ALM1 tRNA 2-selenouridine synthase YP_004536623.1 509987 D 717773 CDS YP_004536624.1 334143468 10719170 511121..511996 1 NC_015581.1 KEGG: tcx:Tcr_0405 diaminopimelate epimerase; manually curated; TIGRFAM: Diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; diaminopimelate epimerase 511996 10719170 Thicy_0370 Thioalkalimicrobium cyclicum ALM1 diaminopimelate epimerase YP_004536624.1 511121 D 717773 CDS YP_004536625.1 334143469 10719171 511986..512702 1 NC_015581.1 PFAM: Protein of unknown function DUF484; KEGG: tcx:Tcr_0406 hypothetical protein; hypothetical protein 512702 10719171 Thicy_0371 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536625.1 511986 D 717773 CDS YP_004536626.1 334143470 10719172 512704..513693 1 NC_015581.1 KEGG: tcx:Tcr_0409 phage integrase; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 513693 10719172 Thicy_0372 Thioalkalimicrobium cyclicum ALM1 tyrosine recombinase xerC YP_004536626.1 512704 D 717773 CDS YP_004536627.1 334143471 10719173 513683..514240 1 NC_015581.1 TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: tcx:Tcr_0410 ATP-dependent protease peptidase subunit; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease hslV 514240 10719173 Thicy_0373 Thioalkalimicrobium cyclicum ALM1 ATP-dependent protease hslV YP_004536627.1 513683 D 717773 CDS YP_004536628.1 334143472 10719174 complement(514252..515790) 1 NC_015581.1 PFAM: Methyltransferase regulatory domain, predicted; KEGG: methyltransferase regulatory domain-containing protein; methyltransferase regulatory domain-containing protein 515790 10719174 Thicy_0374 Thioalkalimicrobium cyclicum ALM1 methyltransferase regulatory domain-containing protein YP_004536628.1 514252 R 717773 CDS YP_004536629.1 334143473 10719175 complement(515827..516693) 1 NC_015581.1 PFAM: Protein of unknown function DUF218; KEGG: tcx:Tcr_0413 hypothetical protein; hypothetical protein 516693 10719175 Thicy_0375 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536629.1 515827 R 717773 CDS YP_004536630.1 334143474 10719176 516808..519369 1 NC_015581.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: tcx:Tcr_0414 AAA ATPase; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 519369 10719176 Thicy_0376 Thioalkalimicrobium cyclicum ALM1 ATP-dependent chaperone ClpB YP_004536630.1 516808 D 717773 CDS YP_004536631.1 334143475 10719177 complement(519467..522040) 1 NC_015581.1 PFAM: AsmA; KEGG: nwa:Nwat_2097 AsmA family protein; AsmA family protein 522040 10719177 Thicy_0377 Thioalkalimicrobium cyclicum ALM1 AsmA family protein YP_004536631.1 519467 R 717773 CDS YP_004536632.1 334143476 10719178 complement(522123..522911) 1 NC_015581.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: gme:Gmet_1468 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 522911 10719178 Thicy_0378 Thioalkalimicrobium cyclicum ALM1 alpha/beta hydrolase fold protein YP_004536632.1 522123 R 717773 CDS YP_004536633.1 334143477 10719179 523051..523383 1 NC_015581.1 PFAM: Small multidrug resistance protein; KEGG: gpb:HDN1F_14560 quaternary ammonium compound resistance protein; small multidrug resistance protein 523383 10719179 Thicy_0379 Thioalkalimicrobium cyclicum ALM1 small multidrug resistance protein YP_004536633.1 523051 D 717773 CDS YP_004536634.1 334143478 10719180 523658..523963 1 NC_015581.1 KEGG: eca:ECA0126 hypothetical protein; hypothetical protein 523963 10719180 Thicy_0380 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536634.1 523658 D 717773 CDS YP_004536635.1 334143479 10719182 525084..525383 1 NC_015581.1 KEGG: dat:HRM2_p00650 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2136; hypothetical protein 525383 10719182 Thicy_0382 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536635.1 525084 D 717773 CDS YP_004536636.1 334143480 10719183 525398..525766 1 NC_015581.1 PFAM: Helix-turn-helix type 3; KEGG: vsa:VSAL_I1284 hypothetical protein; XRE family transcriptional regulator 525766 10719183 Thicy_0383 Thioalkalimicrobium cyclicum ALM1 XRE family transcriptional regulator YP_004536636.1 525398 D 717773 CDS YP_004536637.1 334143481 10719184 complement(525857..526765) 1 NC_015581.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_2185 LysR family transcriptional regulator; LysR family transcriptional regulator 526765 10719184 Thicy_0384 Thioalkalimicrobium cyclicum ALM1 LysR family transcriptional regulator YP_004536637.1 525857 R 717773 CDS YP_004536638.1 334143482 10719185 complement(526848..528200) 1 NC_015581.1 KEGG: sun:SUN_1606 hypothetical protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; HipA N-terminal domain-containing protein 528200 10719185 Thicy_0385 Thioalkalimicrobium cyclicum ALM1 HipA N-terminal domain-containing protein YP_004536638.1 526848 R 717773 CDS YP_004536639.1 334143483 10719186 complement(528197..528457) 1 NC_015581.1 KEGG: bcm:Bcenmc03_5133 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 528457 10719186 Thicy_0386 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004536639.1 528197 R 717773 CDS YP_004536640.1 334143484 10719187 528703..531054 1 NC_015581.1 PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: tcx:Tcr_2184 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 531054 10719187 Thicy_0387 Thioalkalimicrobium cyclicum ALM1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_004536640.1 528703 D 717773 CDS YP_004536641.1 334143485 10719188 531230..532261 1 NC_015581.1 PFAM: Bacterial transport system permease protein; KEGG: tcx:Tcr_0179 transport system permease protein; ABC transporter permease 532261 10719188 Thicy_0388 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004536641.1 531230 D 717773 CDS YP_004536642.1 334143486 10719189 532268..533056 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_0180 ABC transporter related; SMART: ATPase, AAA+ type, core; iron-chelate-transporting ATPase 533056 10719189 Thicy_0389 Thioalkalimicrobium cyclicum ALM1 iron-chelate-transporting ATPase YP_004536642.1 532268 D 717773 CDS YP_004536643.1 334143487 10719190 complement(533053..534348) 1 NC_015581.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: tcx:Tcr_0438 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 534348 10719190 Thicy_0390 Thioalkalimicrobium cyclicum ALM1 phosphoribosylamine--glycine ligase YP_004536643.1 533053 R 717773 CDS YP_004536644.1 334143488 10719191 complement(534363..535925) 1 NC_015581.1 KEGG: tcx:Tcr_0439 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 535925 10719191 Thicy_0391 Thioalkalimicrobium cyclicum ALM1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004536644.1 534363 R 717773 CDS YP_004536645.1 334143489 10719192 complement(535971..536219) 1 NC_015581.1 PFAM: Helix-turn-helix, Fis-type; KEGG: prw:PsycPRwf_1623 fis family transcriptional regulator; Fis family transcriptional regulator 536219 10719192 Thicy_0392 Thioalkalimicrobium cyclicum ALM1 Fis family transcriptional regulator YP_004536645.1 535971 R 717773 CDS YP_004536646.1 334143490 10719193 complement(536213..537208) 1 NC_015581.1 KEGG: pmy:Pmen_0710 nifR3 family TIM-barrel protein; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein 537208 10719193 Thicy_0393 Thioalkalimicrobium cyclicum ALM1 nifR3 family TIM-barrel protein YP_004536646.1 536213 R 717773 CDS YP_004536647.1 334143491 10719194 complement(537214..538101) 1 NC_015581.1 TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: tcx:Tcr_0442 ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 538101 10719194 Thicy_0394 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L11 methyltransferase YP_004536647.1 537214 R 717773 CDS YP_004536648.1 334143492 10719195 complement(538101..539447) 1 NC_015581.1 TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: tcx:Tcr_0443 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase 539447 10719195 Thicy_0395 Thioalkalimicrobium cyclicum ALM1 acetyl-CoA carboxylase, biotin carboxylase YP_004536648.1 538101 R 717773 CDS YP_004536649.1 334143493 10719196 complement(539456..539917) 1 NC_015581.1 KEGG: tcx:Tcr_0444 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein 539917 10719196 Thicy_0396 Thioalkalimicrobium cyclicum ALM1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004536649.1 539456 R 717773 CDS YP_004536650.1 334143494 10719197 complement(539960..540397) 1 NC_015581.1 PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: tcx:Tcr_0445 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 540397 10719197 Thicy_0397 Thioalkalimicrobium cyclicum ALM1 3-dehydroquinate dehydratase YP_004536650.1 539960 R 717773 CDS YP_004536651.1 334143495 10719198 complement(540626..542941) 1 NC_015581.1 HAMAP: Thiol:disulfide interchange protein dsbD; KEGG: tcx:Tcr_0446 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; Thiol:disulfide interchange protein dsbD 542941 10719198 Thicy_0398 Thioalkalimicrobium cyclicum ALM1 Thiol:disulfide interchange protein dsbD YP_004536651.1 540626 R 717773 CDS YP_004536652.1 334143496 10719199 543122..543667 1 NC_015581.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: tcx:Tcr_0447 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 543667 10719199 Thicy_0399 Thioalkalimicrobium cyclicum ALM1 FxsA cytoplasmic membrane protein YP_004536652.1 543122 D 717773 CDS YP_004536653.1 334143497 10719200 543712..544050 1 NC_015581.1 hypothetical protein 544050 10719200 Thicy_0400 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536653.1 543712 D 717773 CDS YP_004536654.1 334143498 10719201 complement(544087..545622) 1 NC_015581.1 PFAM: Methyltransferase regulatory domain, predicted; KEGG: sit:TM1040_3839 methyltransferase type 11; methyltransferase regulatory domain-containing protein 545622 10719201 Thicy_0401 Thioalkalimicrobium cyclicum ALM1 methyltransferase regulatory domain-containing protein YP_004536654.1 544087 R 717773 CDS YP_004536655.1 334143499 10719202 complement(545765..545977) 1 NC_015581.1 KEGG: nhl:Nhal_3367 hypothetical protein; hypothetical protein 545977 10719202 Thicy_0402 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536655.1 545765 R 717773 CDS YP_004536656.1 334143500 10719203 546097..546675 1 NC_015581.1 KEGG: tcx:Tcr_1310 hypothetical protein; hypothetical protein 546675 10719203 Thicy_0403 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536656.1 546097 D 717773 CDS YP_004536657.1 334143501 10719204 complement(546652..547344) 1 NC_015581.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bbe:BBR47_08490 pseudouridine synthase; SMART: RNA-binding S4; pseudouridine synthase Rsu 547344 10719204 Thicy_0404 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rsu YP_004536657.1 546652 R 717773 CDS YP_004536658.1 334143502 10719205 547500..547748 1 NC_015581.1 KEGG: hypothetical protein; hypothetical protein 547748 10719205 Thicy_0405 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536658.1 547500 D 717773 CDS YP_004536659.1 334143503 10719206 547745..548095 1 NC_015581.1 PFAM: PemK-like protein; KEGG: transcriptional modulator of maze/toxin, mazf; PemK family protein 548095 10719206 Thicy_0406 Thioalkalimicrobium cyclicum ALM1 PemK family protein YP_004536659.1 547745 D 717773 CDS YP_004536660.1 334143504 10719207 complement(548214..549173) 1 NC_015581.1 TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1925 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; molybdate ABC transporter ATPase 549173 10719207 Thicy_0407 Thioalkalimicrobium cyclicum ALM1 molybdate ABC transporter ATPase YP_004536660.1 548214 R 717773 CDS YP_004536661.1 334143505 10719208 complement(549296..549694) 1 NC_015581.1 KEGG: kko:Kkor_1323 hypothetical protein; hypothetical protein 549694 10719208 Thicy_0408 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536661.1 549296 R 717773 CDS YP_004536662.1 334143506 10719209 complement(549684..549896) 1 NC_015581.1 KEGG: tkm:TK90_0086 hypothetical protein; hypothetical protein 549896 10719209 Thicy_0409 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536662.1 549684 R 717773 CDS YP_004536663.1 334143507 10719210 complement(549893..550201) 1 NC_015581.1 KEGG: kko:Kkor_1324 heavy metal transport/detoxification protein; hypothetical protein 550201 10719210 Thicy_0410 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536663.1 549893 R 717773 CDS YP_004536664.1 334143508 10719211 complement(550185..550604) 1 NC_015581.1 KEGG: rmr:Rmar_2453 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator 550604 10719211 Thicy_0411 Thioalkalimicrobium cyclicum ALM1 MerR family transcriptional regulator YP_004536664.1 550185 R 717773 CDS YP_004536665.1 334143509 10719212 complement(550726..551688) 1 NC_015581.1 KEGG: tkm:TK90_1656 rhodanese domain protein; rhodanese domain-containing protein 551688 10719212 Thicy_0412 Thioalkalimicrobium cyclicum ALM1 rhodanese domain-containing protein YP_004536665.1 550726 R 717773 CDS YP_004536666.1 334143510 10719213 551858..552739 1 NC_015581.1 PFAM: Bile acid:sodium symporter; KEGG: tgr:Tgr7_1550 bile acid:sodium symporter; bile acid:sodium symporter 552739 10719213 Thicy_0413 Thioalkalimicrobium cyclicum ALM1 bile acid:sodium symporter YP_004536666.1 551858 D 717773 CDS YP_004536667.1 334143511 10719214 complement(552874..553569) 1 NC_015581.1 PFAM: Protein of unknown function DUF81; KEGG: rsq:Rsph17025_4316 hypothetical protein; hypothetical protein 553569 10719214 Thicy_0414 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536667.1 552874 R 717773 CDS YP_004536668.1 334143512 10719215 complement(553574..554641) 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1925 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; molybdate ABC transporter ATPase 554641 10719215 Thicy_0415 Thioalkalimicrobium cyclicum ALM1 molybdate ABC transporter ATPase YP_004536668.1 553574 R 717773 CDS YP_004536669.1 334143513 10719216 complement(554651..555355) 1 NC_015581.1 KEGG: tkm:TK90_1628 molybdate ABC transporter, inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter permease 555355 10719216 Thicy_0416 Thioalkalimicrobium cyclicum ALM1 molybdate ABC transporter permease YP_004536669.1 554651 R 717773 CDS YP_004536670.1 334143514 10719217 complement(555404..556150) 1 NC_015581.1 KEGG: mca:MCA1378 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 556150 10719217 Thicy_0417 Thioalkalimicrobium cyclicum ALM1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004536670.1 555404 R 717773 CDS YP_004536671.1 334143515 10719218 complement(556147..556947) 1 NC_015581.1 KEGG: hna:Hneap_0810 transcriptional regulator, ModE family; TIGRFAM: Molybdenum-pterin binding; PFAM: HTH transcriptional regulator, LysR; Transport-associated OB, type 1; ModE family transcriptional regulator 556947 10719218 Thicy_0418 Thioalkalimicrobium cyclicum ALM1 ModE family transcriptional regulator YP_004536671.1 556147 R 717773 CDS YP_004536672.1 334143516 10719219 557157..557399 1 NC_015581.1 KEGG: dda:Dd703_4032 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 557399 10719219 Thicy_0419 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004536672.1 557157 D 717773 CDS YP_004536673.1 334143517 10719220 557399..558715 1 NC_015581.1 KEGG: xne:XNC1_4231 HipA protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; HipA N-terminal domain-containing protein 558715 10719220 Thicy_0420 Thioalkalimicrobium cyclicum ALM1 HipA N-terminal domain-containing protein YP_004536673.1 557399 D 717773 CDS YP_004536674.1 334143518 10719221 complement(558719..559825) 1 NC_015581.1 KEGG: aeh:Mlg_2709 bile acid:sodium symporter; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 559825 10719221 Thicy_0421 Thioalkalimicrobium cyclicum ALM1 arsenical-resistance protein YP_004536674.1 558719 R 717773 CDS YP_004536675.1 334143519 10719222 complement(559896..561278) 1 NC_015581.1 KEGG: amt:Amet_2978 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; two component, sigma54 specific, transcriptional regulator, Fis family 561278 10719222 Thicy_0422 Thioalkalimicrobium cyclicum ALM1 two component, sigma54 specific, transcriptional regulator, Fis family YP_004536675.1 559896 R 717773 CDS YP_004536676.1 334143520 10719223 complement(561275..562729) 1 NC_015581.1 KEGG: gfo:GFO_0729 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 562729 10719223 Thicy_0423 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004536676.1 561275 R 717773 CDS YP_004536677.1 334143521 10719224 complement(562787..563704) 1 NC_015581.1 KEGG: tcx:Tcr_1871 beta-lactamase-like; beta-lactamase-like protein 563704 10719224 Thicy_0424 Thioalkalimicrobium cyclicum ALM1 beta-lactamase-like protein YP_004536677.1 562787 R 717773 CDS YP_004536678.1 334143522 10719225 complement(563931..564827) 1 NC_015581.1 PFAM: Porin, Gram-negative type; KEGG: tgr:Tgr7_2784 putative porin; porin 564827 10719225 Thicy_0425 Thioalkalimicrobium cyclicum ALM1 porin YP_004536678.1 563931 R 717773 CDS YP_004536679.1 334143523 10719226 complement(565156..566043) 1 NC_015581.1 KEGG: mgm:Mmc1_3535 phosphonate ABC transporter, periplasmic phosphonate-binding protein; hypothetical protein 566043 10719226 Thicy_0426 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536679.1 565156 R 717773 CDS YP_004536680.1 334143524 10719227 complement(566036..567922) 1 NC_015581.1 KEGG: tcx:Tcr_1761 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 567922 10719227 Thicy_0427 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004536680.1 566036 R 717773 CDS YP_004536681.1 334143525 10719228 complement(567926..568528) 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1759 thioredoxin, putative; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 568528 10719228 Thicy_0428 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004536681.1 567926 R 717773 CDS YP_004536682.1 334143526 10719229 complement(568525..569208) 1 NC_015581.1 KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 569208 10719229 Thicy_0429 Thioalkalimicrobium cyclicum ALM1 HAD-superfamily hydrolase YP_004536682.1 568525 R 717773 CDS YP_004536683.1 334143527 10719230 569308..569889 1 NC_015581.1 PFAM: NUDIX hydrolase domain; KEGG: tcx:Tcr_1756 ADP-ribose diphosphatase NudE; NUDIX hydrolase 569889 10719230 Thicy_0430 Thioalkalimicrobium cyclicum ALM1 NUDIX hydrolase YP_004536683.1 569308 D 717773 CDS YP_004536684.1 334143528 10719231 569886..570710 1 NC_015581.1 KEGG: hha:Hhal_2058 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; PFAM: Inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase 570710 10719231 Thicy_0431 Thioalkalimicrobium cyclicum ALM1 3'(2'),5'-bisphosphate nucleotidase YP_004536684.1 569886 D 717773 CDS YP_004536685.1 334143529 10719232 complement(570774..572057) 1 NC_015581.1 KEGG: tcx:Tcr_1570 glutamate-1-semialdehyde-2,1-aminomutase; manually curated; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; glutamate-1-semialdehyde 2,1-aminomutase 572057 10719232 Thicy_0432 Thioalkalimicrobium cyclicum ALM1 glutamate-1-semialdehyde 2,1-aminomutase YP_004536685.1 570774 R 717773 CDS YP_004536686.1 334143530 10719233 complement(572074..572493) 1 NC_015581.1 KEGG: lch:Lcho_0088 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 572493 10719233 Thicy_0433 Thioalkalimicrobium cyclicum ALM1 rhodanese-like protein YP_004536686.1 572074 R 717773 CDS YP_004536687.1 334143531 10719234 complement(572509..573006) 1 NC_015581.1 PFAM: Redoxin; KEGG: tcx:Tcr_1569 putative thioredoxin; redoxin domain-containing protein 573006 10719234 Thicy_0434 Thioalkalimicrobium cyclicum ALM1 redoxin domain-containing protein YP_004536687.1 572509 R 717773 CDS YP_004536688.1 334143532 10719235 complement(573060..573725) 1 NC_015581.1 PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: tcx:Tcr_1568 ribose-5-phosphate isomerase A; ribose-5-phosphate isomerase A 573725 10719235 Thicy_0435 Thioalkalimicrobium cyclicum ALM1 ribose-5-phosphate isomerase A YP_004536688.1 573060 R 717773 CDS YP_004536689.1 334143533 10719236 573867..574301 1 NC_015581.1 hypothetical protein 574301 10719236 Thicy_0436 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536689.1 573867 D 717773 CDS YP_004536690.1 334143534 10719237 complement(574316..576751) 1 NC_015581.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: tcx:Tcr_1548 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; anti-sigma H sporulation factor LonB 576751 10719237 Thicy_0437 Thioalkalimicrobium cyclicum ALM1 anti-sigma H sporulation factor LonB YP_004536690.1 574316 R 717773 CDS YP_004536691.1 334143535 10719238 576842..577387 1 NC_015581.1 KEGG: tcx:Tcr_1547 molybdopterin binding domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 577387 10719238 Thicy_0438 Thioalkalimicrobium cyclicum ALM1 molybdenum cofactor synthesis domain-containing protein YP_004536691.1 576842 D 717773 CDS YP_004536692.1 334143536 10719239 577380..578345 1 NC_015581.1 TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: tcx:Tcr_1546 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 578345 10719239 Thicy_0439 Thioalkalimicrobium cyclicum ALM1 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific YP_004536692.1 577380 D 717773 CDS YP_004536693.1 334143537 10719240 578391..579500 1 NC_015581.1 TIGRFAM: Chorismate synthase; KEGG: tcx:Tcr_1538 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 579500 10719240 Thicy_0440 Thioalkalimicrobium cyclicum ALM1 chorismate synthase YP_004536693.1 578391 D 717773 CDS YP_004536694.1 334143538 10719241 579484..580677 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_1537 major facilitator transporter; major facilitator superfamily protein 580677 10719241 Thicy_0441 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004536694.1 579484 D 717773 CDS YP_004536695.1 334143539 10719242 580697..581092 1 NC_015581.1 TIGRFAM: Glyoxalase I; KEGG: tcx:Tcr_1536 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 581092 10719242 Thicy_0442 Thioalkalimicrobium cyclicum ALM1 lactoylglutathione lyase YP_004536695.1 580697 D 717773 CDS YP_004536696.1 334143540 10719243 581119..581430 1 NC_015581.1 KEGG: tcx:Tcr_1534 hypothetical protein; HAMAP: Protein of unknown function DUF1255; PFAM: Protein of unknown function DUF1255; hypothetical protein 581430 10719243 Thicy_0443 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536696.1 581119 D 717773 CDS YP_004536697.1 334143541 10719245 complement(581723..582727) 1 NC_015581.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: tcx:Tcr_1530 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 582727 10719245 Thicy_0445 Thioalkalimicrobium cyclicum ALM1 tryptophanyl-tRNA synthetase YP_004536697.1 581723 R 717773 CDS YP_004536698.1 334143542 10719246 complement(582760..583533) 1 NC_015581.1 KEGG: tcx:Tcr_1624 TonB-like; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein 583533 10719246 Thicy_0446 Thioalkalimicrobium cyclicum ALM1 TonB family protein YP_004536698.1 582760 R 717773 CDS YP_004536699.1 334143543 10719247 complement(583533..583916) 1 NC_015581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tcx:Tcr_1623 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 583916 10719247 Thicy_0447 Thioalkalimicrobium cyclicum ALM1 biopolymer transport protein ExbD/TolR YP_004536699.1 583533 R 717773 CDS YP_004536700.1 334143544 10719248 complement(583919..584371) 1 NC_015581.1 KEGG: tcx:Tcr_1622 MotA/TolQ/ExbB proton channel; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 584371 10719248 Thicy_0448 Thioalkalimicrobium cyclicum ALM1 tonB-system energizer ExbB YP_004536700.1 583919 R 717773 CDS YP_004536701.1 334143545 10719249 584567..585574 1 NC_015581.1 KEGG: tcx:Tcr_1621 beta-lactamase-like; beta-lactamase-like protein 585574 10719249 Thicy_0449 Thioalkalimicrobium cyclicum ALM1 beta-lactamase-like protein YP_004536701.1 584567 D 717773 CDS YP_004536702.1 334143546 10719250 complement(585624..586457) 1 NC_015581.1 TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: tcx:Tcr_1620 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB 586457 10719250 Thicy_0450 Thioalkalimicrobium cyclicum ALM1 phosphoserine phosphatase SerB YP_004536702.1 585624 R 717773 CDS YP_004536703.1 334143547 10719251 complement(586475..586894) 1 NC_015581.1 PFAM: RDD; KEGG: tcx:Tcr_1619 RDD; RDD domain-containing protein 586894 10719251 Thicy_0451 Thioalkalimicrobium cyclicum ALM1 RDD domain-containing protein YP_004536703.1 586475 R 717773 CDS YP_004536704.1 334143548 10719252 586959..587627 1 NC_015581.1 KEGG: tcx:Tcr_1618 hypothetical protein; hypothetical protein 587627 10719252 Thicy_0452 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536704.1 586959 D 717773 CDS YP_004536705.1 334143549 10719253 complement(587678..587998) 1 NC_015581.1 KEGG: tcx:Tcr_1617 hypothetical protein; hypothetical protein 587998 10719253 Thicy_0453 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536705.1 587678 R 717773 CDS YP_004536706.1 334143550 10719254 588320..589780 1 NC_015581.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: tcx:Tcr_1616 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 589780 10719254 Thicy_0454 Thioalkalimicrobium cyclicum ALM1 inosine-5'-monophosphate dehydrogenase YP_004536706.1 588320 D 717773 CDS YP_004536707.1 334143551 10719255 589855..591435 1 NC_015581.1 PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: tcx:Tcr_1615 GMP synthase; GMP synthase 591435 10719255 Thicy_0455 Thioalkalimicrobium cyclicum ALM1 GMP synthase YP_004536707.1 589855 D 717773 CDS YP_004536708.1 334143552 10719256 591475..591819 1 NC_015581.1 hypothetical protein 591819 10719256 Thicy_0456 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536708.1 591475 D 717773 CDS YP_004536709.1 334143553 10719257 591800..592336 1 NC_015581.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sbp:Sbal223_1381 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein 592336 10719257 Thicy_0457 Thioalkalimicrobium cyclicum ALM1 CMP/dCMP deaminase zinc-binding protein YP_004536709.1 591800 D 717773 CDS YP_004536710.1 334143554 10719258 592444..594357 1 NC_015581.1 HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: tcx:Tcr_1609 heat shock protein 90; SMART: ATP-binding region, ATPase-like; chaperone protein htpG 594357 10719258 Thicy_0458 Thioalkalimicrobium cyclicum ALM1 chaperone protein htpG YP_004536710.1 592444 D 717773 CDS YP_004536711.1 334143555 10719259 complement(594557..595261) 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: llo:LLO_2064 macrophage infectivity potentiator; FKBP-type peptidyl-prolyl isomerase domain-containing protein 595261 10719259 Thicy_0459 Thioalkalimicrobium cyclicum ALM1 FKBP-type peptidyl-prolyl isomerase domain-containing protein YP_004536711.1 594557 R 717773 CDS YP_004536712.1 334143556 10719260 complement(595419..596063) 1 NC_015581.1 PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: tcx:Tcr_0655 pseudouridine synthase; pseudouridine synthase 596063 10719260 Thicy_0460 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase YP_004536712.1 595419 R 717773 CDS YP_004536713.1 334143557 10719261 596225..596716 1 NC_015581.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: hna:Hneap_1675 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 596716 10719261 Thicy_0461 Thioalkalimicrobium cyclicum ALM1 protein tyrosine phosphatase YP_004536713.1 596225 D 717773 CDS YP_004536714.1 334143558 10719262 complement(596823..597152) 1 NC_015581.1 KEGG: tcx:Tcr_0972 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 597152 10719262 Thicy_0462 Thioalkalimicrobium cyclicum ALM1 sigma 54 modulation protein/ribosomal protein S30EA YP_004536714.1 596823 R 717773 CDS YP_004536715.1 334143559 10719263 complement(597242..597967) 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_0973 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 597967 10719263 Thicy_0463 Thioalkalimicrobium cyclicum ALM1 sulfate-transporting ATPase YP_004536715.1 597242 R 717773 CDS YP_004536716.1 334143560 10719264 complement(597967..598536) 1 NC_015581.1 manually curated; TIGRFAM: Cell envelope biogenesis YhbN; KEGG: tcx:Tcr_0974 OstA-like protein; PFAM: OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 598536 10719264 Thicy_0464 Thioalkalimicrobium cyclicum ALM1 lipopolysaccharide transport periplasmic protein LptA YP_004536716.1 597967 R 717773 CDS YP_004536717.1 334143561 10719265 complement(598514..598939) 1 NC_015581.1 PFAM: Protein of unknown function DUF1239; hypothetical protein 598939 10719265 Thicy_0465 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536717.1 598514 R 717773 CDS YP_004536718.1 334143562 10719266 complement(599099..599623) 1 NC_015581.1 KEGG: tcx:Tcr_0976 phosphatase KdsC; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 599623 10719266 Thicy_0466 Thioalkalimicrobium cyclicum ALM1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_004536718.1 599099 R 717773 CDS YP_004536719.1 334143563 10719267 complement(599637..600626) 1 NC_015581.1 KEGG: tcx:Tcr_0977 K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 600626 10719267 Thicy_0467 Thioalkalimicrobium cyclicum ALM1 CaCA family Na+/Ca+ antiporter YP_004536719.1 599637 R 717773 CDS YP_004536720.1 334143564 10719268 600772..601401 1 NC_015581.1 KEGG: tcx:Tcr_0978 hypothetical protein; hypothetical protein 601401 10719268 Thicy_0468 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536720.1 600772 D 717773 CDS YP_004536721.1 334143565 10719269 601437..602228 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_0979 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 602228 10719269 Thicy_0469 Thioalkalimicrobium cyclicum ALM1 sulfate-transporting ATPase YP_004536721.1 601437 D 717773 CDS YP_004536722.1 334143566 10719270 602228..603001 1 NC_015581.1 KEGG: tcx:Tcr_0980 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein 603001 10719270 Thicy_0470 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536722.1 602228 D 717773 CDS YP_004536723.1 334143567 10719271 603015..603485 1 NC_015581.1 PFAM: Mammalian cell entry related; KEGG: tcx:Tcr_0981 hypothetical protein; mammalian cell entry domain-containing protein 603485 10719271 Thicy_0471 Thioalkalimicrobium cyclicum ALM1 mammalian cell entry domain-containing protein YP_004536723.1 603015 D 717773 CDS YP_004536724.1 334143568 10719272 603482..604096 1 NC_015581.1 PFAM: Toluene tolerance; KEGG: tcx:Tcr_0982 toluene tolerance; toluene tolerance family protein 604096 10719272 Thicy_0472 Thioalkalimicrobium cyclicum ALM1 toluene tolerance family protein YP_004536724.1 603482 D 717773 CDS YP_004536725.1 334143569 10719273 604130..604396 1 NC_015581.1 hypothetical protein 604396 10719273 Thicy_0473 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536725.1 604130 D 717773 CDS YP_004536726.1 334143570 10719274 604393..605325 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_0984 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 605325 10719274 Thicy_0474 Thioalkalimicrobium cyclicum ALM1 sulfate-transporting ATPase YP_004536726.1 604393 D 717773 CDS YP_004536727.1 334143571 10719275 605322..606083 1 NC_015581.1 PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_0985 hypothetical protein; ABC transporter 606083 10719275 Thicy_0475 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004536727.1 605322 D 717773 CDS YP_004536728.1 334143572 10719276 606098..606325 1 NC_015581.1 PFAM: BolA-like protein; KEGG: tcx:Tcr_0986 BolA-like protein; BolA family protein 606325 10719276 Thicy_0476 Thioalkalimicrobium cyclicum ALM1 BolA family protein YP_004536728.1 606098 D 717773 CDS YP_004536729.1 334143573 10719277 606326..607585 1 NC_015581.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: tcx:Tcr_0987 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 607585 10719277 Thicy_0477 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004536729.1 606326 D 717773 CDS YP_004536730.1 334143574 10719278 607601..608233 1 NC_015581.1 PFAM: ATP phosphoribosyltransferase, catalytic region; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; HAMAP: ATP phosphoribosyltransferase; KEGG: tcx:Tcr_0988 ATP phosphoribosyltransferase catalytic subunit; ATP phosphoribosyltransferase 608233 10719278 Thicy_0478 Thioalkalimicrobium cyclicum ALM1 ATP phosphoribosyltransferase YP_004536730.1 607601 D 717773 CDS YP_004536731.1 334143575 10719279 608236..609543 1 NC_015581.1 PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: tgr:Tgr7_0745 histidinol dehydrogenase; histidinol dehydrogenase 609543 10719279 Thicy_0479 Thioalkalimicrobium cyclicum ALM1 histidinol dehydrogenase YP_004536731.1 608236 D 717773 CDS YP_004536732.1 334143576 10719280 609545..610654 1 NC_015581.1 KEGG: tgr:Tgr7_0746 histidinol-phosphate aminotransferase; manually curated; TIGRFAM: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; HAMAP: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 610654 10719280 Thicy_0480 Thioalkalimicrobium cyclicum ALM1 histidinol-phosphate aminotransferase YP_004536732.1 609545 D 717773 CDS YP_004536733.1 334143577 10719281 610671..611414 1 NC_015581.1 KEGG: tcx:Tcr_0990 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 611414 10719281 Thicy_0481 Thioalkalimicrobium cyclicum ALM1 NGG1p interacting factor 3 protein, NIF3 YP_004536733.1 610671 D 717773 CDS YP_004536734.1 334143578 10719282 611554..612168 1 NC_015581.1 TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: tcx:Tcr_0991 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 612168 10719282 Thicy_0482 Thioalkalimicrobium cyclicum ALM1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_004536734.1 611554 D 717773 CDS YP_004536735.1 334143579 10719283 612168..613412 1 NC_015581.1 PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: tcx:Tcr_0992 cytochrome b/b6-like; cytochrome b/b6 domain-containing protein 613412 10719283 Thicy_0483 Thioalkalimicrobium cyclicum ALM1 cytochrome b/b6 domain-containing protein YP_004536735.1 612168 D 717773 CDS YP_004536736.1 334143580 10719284 613409..614077 1 NC_015581.1 PFAM: Cytochrome c1; KEGG: tcx:Tcr_0993 cytochrome c1; cytochrome c1 614077 10719284 Thicy_0484 Thioalkalimicrobium cyclicum ALM1 cytochrome c1 YP_004536736.1 613409 D 717773 CDS YP_004536737.1 334143581 10719285 614176..615540 1 NC_015581.1 KEGG: tcx:Tcr_0994 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 615540 10719285 Thicy_0485 Thioalkalimicrobium cyclicum ALM1 DNA repair protein RadA YP_004536737.1 614176 D 717773 CDS YP_004536738.1 334143582 10719286 complement(615530..616348) 1 NC_015581.1 PFAM: Inositol monophosphatase; KEGG: tcx:Tcr_0995 inositol monophosphatase; inositol monophosphatase 616348 10719286 Thicy_0486 Thioalkalimicrobium cyclicum ALM1 inositol monophosphatase YP_004536738.1 615530 R 717773 CDS YP_004536739.1 334143583 10719287 complement(616367..617653) 1 NC_015581.1 PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: tcx:Tcr_0996 hypothetical protein; hypothetical protein 617653 10719287 Thicy_0487 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536739.1 616367 R 717773 CDS YP_004536740.1 334143584 10719288 complement(617708..618502) 1 NC_015581.1 PFAM: Cytochrome c assembly protein; KEGG: tcx:Tcr_0997 cytochrome c assembly protein; cytochrome c assembly protein 618502 10719288 Thicy_0488 Thioalkalimicrobium cyclicum ALM1 cytochrome c assembly protein YP_004536740.1 617708 R 717773 CDS YP_004536741.1 334143585 10719289 618633..620012 1 NC_015581.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: tcx:Tcr_0998 signal recognition particle protein; SMART: ATPase, AAA+ type, core; signal recognition particle protein 620012 10719289 Thicy_0489 Thioalkalimicrobium cyclicum ALM1 signal recognition particle protein YP_004536741.1 618633 D 717773 CDS YP_004536742.1 334143586 10719290 620196..620432 1 NC_015581.1 TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: ilo:IL1726 ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 620432 10719290 Thicy_0490 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S16 YP_004536742.1 620196 D 717773 CDS YP_004536743.1 334143587 10719291 620452..620961 1 NC_015581.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: tcx:Tcr_0648 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; Ribosome maturation factor rimM 620961 10719291 Thicy_0491 Thioalkalimicrobium cyclicum ALM1 Ribosome maturation factor rimM YP_004536743.1 620452 D 717773 CDS YP_004536744.1 334143588 10719292 620970..621656 1 NC_015581.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: tcx:Tcr_0649 tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 621656 10719292 Thicy_0492 Thioalkalimicrobium cyclicum ALM1 tRNA (guanine-N(1)-)-methyltransferase YP_004536744.1 620970 D 717773 CDS YP_004536745.1 334143589 10719293 621777..622121 1 NC_015581.1 TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: tcx:Tcr_0650 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 622121 10719293 Thicy_0493 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L19 YP_004536745.1 621777 D 717773 CDS YP_004536746.1 334143590 10719294 622228..622986 1 NC_015581.1 KEGG: hch:HCH_05292 putative FlgJ-related protein; putative FlgJ-like protein 622986 10719294 Thicy_0494 Thioalkalimicrobium cyclicum ALM1 putative FlgJ-like protein YP_004536746.1 622228 D 717773 CDS YP_004536747.1 334143591 10719295 622976..623443 1 NC_015581.1 PFAM: Protein of unknown function DUF785; KEGG: syp:SYNPCC7002_A0685 ribosomal protein S6 modification protein; hypothetical protein 623443 10719295 Thicy_0495 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536747.1 622976 D 717773 CDS YP_004536748.1 334143592 10719296 623477..624382 1 NC_015581.1 TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: tkm:TK90_1766 alpha-L-glutamate ligase, RimK family; PFAM: ATP-grasp fold, RimK-type; 30S ribosomal protein S6 modification protein 624382 10719296 Thicy_0496 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S6 modification protein YP_004536748.1 623477 D 717773 CDS YP_004536749.1 334143593 10719297 624388..625431 1 NC_015581.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tcx:Tcr_2062 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 625431 10719297 Thicy_0497 Thioalkalimicrobium cyclicum ALM1 succinylglutamate desuccinylase/aspartoacylase YP_004536749.1 624388 D 717773 CDS YP_004536750.1 334143594 10719298 complement(625459..625980) 1 NC_015581.1 KEGG: tcx:Tcr_1567 hypothetical protein; hypothetical protein 625980 10719298 Thicy_0498 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536750.1 625459 R 717773 CDS YP_004536751.1 334143595 10719299 complement(626034..626897) 1 NC_015581.1 TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Tetratricopeptide TPR-3; KEGG: tcx:Tcr_1595 thioredoxin; SMART: Tetratricopeptide repeat; thioredoxin 626897 10719299 Thicy_0499 Thioalkalimicrobium cyclicum ALM1 thioredoxin YP_004536751.1 626034 R 717773 CDS YP_004536752.1 334143596 10719300 complement(626924..629512) 1 NC_015581.1 SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: tcx:Tcr_1594 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; DNA mismatch repair protein mutS 629512 10719300 Thicy_0500 Thioalkalimicrobium cyclicum ALM1 DNA mismatch repair protein mutS YP_004536752.1 626924 R 717773 CDS YP_004536753.1 334143597 10719301 629821..630327 1 NC_015581.1 KEGG: abo:ABO_1802 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein 630327 10719301 Thicy_0501 Thioalkalimicrobium cyclicum ALM1 CinA domain-containing protein YP_004536753.1 629821 D 717773 CDS YP_004536754.1 334143598 10719302 630483..631526 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: tcx:Tcr_1592 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; protein recA 631526 10719302 Thicy_0502 Thioalkalimicrobium cyclicum ALM1 protein recA YP_004536754.1 630483 D 717773 CDS YP_004536755.1 334143599 10719303 631510..632013 1 NC_015581.1 KEGG: tcx:Tcr_1591 regulatory protein RecX; regulatory protein RecX 632013 10719303 Thicy_0503 Thioalkalimicrobium cyclicum ALM1 regulatory protein RecX YP_004536755.1 631510 D 717773 CDS YP_004536756.1 334143600 10719304 632052..634649 1 NC_015581.1 KEGG: tcx:Tcr_1590 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; alanyl-tRNA synthetase 634649 10719304 Thicy_0504 Thioalkalimicrobium cyclicum ALM1 alanyl-tRNA synthetase YP_004536756.1 632052 D 717773 CDS YP_004536757.1 334143601 10719305 634712..635929 1 NC_015581.1 KEGG: tcx:Tcr_1589 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 635929 10719305 Thicy_0505 Thioalkalimicrobium cyclicum ALM1 aspartate kinase YP_004536757.1 634712 D 717773 CDS YP_004536758.1 334143602 10719308 complement(636348..637535) 1 NC_015581.1 KEGG: tcx:Tcr_1081 4Fe-4S cluster binding; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; iron-sulfur cluster binding protein 637535 10719308 Thicy_0506 Thioalkalimicrobium cyclicum ALM1 iron-sulfur cluster binding protein YP_004536758.1 636348 R 717773 CDS YP_004536759.1 334143603 10719309 637578..638084 1 NC_015581.1 KEGG: afr:AFE_1926 conserved hypothetical protein TIGR00150; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 638084 10719309 Thicy_0507 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536759.1 637578 D 717773 CDS YP_004536760.1 334143604 10719310 638212..639912 1 NC_015581.1 KEGG: tcx:Tcr_1083 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup; cell wall hydrolase/autolysin 639912 10719310 Thicy_0508 Thioalkalimicrobium cyclicum ALM1 cell wall hydrolase/autolysin YP_004536760.1 638212 D 717773 CDS YP_004536761.1 334143605 10719311 639987..641795 1 NC_015581.1 TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: tcx:Tcr_1084 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; DNA mismatch repair protein mutL 641795 10719311 Thicy_0509 Thioalkalimicrobium cyclicum ALM1 DNA mismatch repair protein mutL YP_004536761.1 639987 D 717773 CDS YP_004536762.1 334143606 10719312 641803..642774 1 NC_015581.1 PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: tcx:Tcr_1085 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; tRNA dimethylallyltransferase 642774 10719312 Thicy_0510 Thioalkalimicrobium cyclicum ALM1 tRNA dimethylallyltransferase YP_004536762.1 641803 D 717773 CDS YP_004536763.1 334143607 10719313 642835..643107 1 NC_015581.1 TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: tcx:Tcr_1086 host factor Hfq; PFAM: Like-Sm ribonucleoprotein, core; protein hfq 643107 10719313 Thicy_0511 Thioalkalimicrobium cyclicum ALM1 protein hfq YP_004536763.1 642835 D 717773 CDS YP_004536764.1 334143608 10719314 643120..644430 1 NC_015581.1 KEGG: tcx:Tcr_1087 small GTP-binding protein domain-containing protein; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding proten HflX 644430 10719314 Thicy_0512 Thioalkalimicrobium cyclicum ALM1 GTP-binding proten HflX YP_004536764.1 643120 D 717773 CDS YP_004536765.1 334143609 10719315 644546..645781 1 NC_015581.1 TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: tcx:Tcr_1090 HflK protein; SMART: Band 7 protein; HflK protein 645781 10719315 Thicy_0513 Thioalkalimicrobium cyclicum ALM1 HflK protein YP_004536765.1 644546 D 717773 CDS YP_004536766.1 334143610 10719316 645783..646631 1 NC_015581.1 TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: tcx:Tcr_1091 HflC protein; SMART: Band 7 protein; HflC protein 646631 10719316 Thicy_0514 Thioalkalimicrobium cyclicum ALM1 HflC protein YP_004536766.1 645783 D 717773 CDS YP_004536767.1 334143611 10719317 646662..646865 1 NC_015581.1 KEGG: tcx:Tcr_1092 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2065; hypothetical protein 646865 10719317 Thicy_0515 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536767.1 646662 D 717773 CDS YP_004536768.1 334143612 10719318 646890..648068 1 NC_015581.1 HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: tcx:Tcr_1093 ATP phosphoribosyltransferase regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 648068 10719318 Thicy_0516 Thioalkalimicrobium cyclicum ALM1 ATP phosphoribosyltransferase regulatory subunit YP_004536768.1 646890 D 717773 CDS YP_004536769.1 334143613 10719319 648080..649396 1 NC_015581.1 KEGG: tcx:Tcr_1094 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; adenylosuccinate synthetase 649396 10719319 Thicy_0517 Thioalkalimicrobium cyclicum ALM1 adenylosuccinate synthetase YP_004536769.1 648080 D 717773 CDS YP_004536770.1 334143614 10719320 complement(649435..649650) 1 NC_015581.1 KEGG: tcx:Tcr_1218 SlyX; HAMAP: Protein slyX; PFAM: SlyX; protein slyX 649650 10719320 Thicy_0518 Thioalkalimicrobium cyclicum ALM1 protein slyX YP_004536770.1 649435 R 717773 CDS YP_004536771.1 334143615 10719321 complement(649652..651442) 1 NC_015581.1 PFAM: Peptidase M61; KEGG: tcx:Tcr_1217 peptidase M61; peptidase M61 domain-containing protein 651442 10719321 Thicy_0519 Thioalkalimicrobium cyclicum ALM1 peptidase M61 domain-containing protein YP_004536771.1 649652 R 717773 CDS YP_004536772.1 334143616 10719322 651573..652673 1 NC_015581.1 PFAM: Mechanosensitive ion channel MscS; KEGG: pat:Patl_2842 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 652673 10719322 Thicy_0520 Thioalkalimicrobium cyclicum ALM1 mechanosensitive ion channel MscS YP_004536772.1 651573 D 717773 CDS YP_004536773.1 334143617 10719323 652670..653557 1 NC_015581.1 KEGG: tcx:Tcr_1596 hypothetical protein; hypothetical protein 653557 10719323 Thicy_0521 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536773.1 652670 D 717773 CDS YP_004536774.1 334143618 10719324 653727..655142 1 NC_015581.1 TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: tcx:Tcr_1216 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 655142 10719324 Thicy_0522 Thioalkalimicrobium cyclicum ALM1 glutamyl-tRNA synthetase YP_004536774.1 653727 D 717773 CDS YP_004536775.1 334143619 10719325 655188..656555 1 NC_015581.1 SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: tcx:Tcr_1079 deoxyguanosinetriphosphate triphosphohydrolase-like protein; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein 656555 10719325 Thicy_0523 Thioalkalimicrobium cyclicum ALM1 Deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_004536775.1 655188 D 717773 CDS YP_004536776.1 334143620 10719327 657020..657481 1 NC_015581.1 KEGG: saz:Sama_3557 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188; hypothetical protein 657481 10719327 Thicy_0524 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536776.1 657020 D 717773 CDS YP_004536777.1 334143621 10719328 complement(657461..659101) 1 NC_015581.1 TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: psa:PST_4032 exodeoxyribonuclease V alpha chain; SMART: ATPase, AAA+ type, core; exodeoxyribonuclease V subunit alpha 659101 10719328 Thicy_0525 Thioalkalimicrobium cyclicum ALM1 exodeoxyribonuclease V subunit alpha YP_004536777.1 657461 R 717773 CDS YP_004536778.1 334143622 10719329 complement(659103..662630) 1 NC_015581.1 KEGG: dps:DP1344 exodeoxyribonuclease V, beta chain; TIGRFAM: Exodeoxyribonuclease V, beta subunit; PFAM: DNA helicase, UvrD/REP type; exodeoxyribonuclease V subunit beta 662630 10719329 Thicy_0526 Thioalkalimicrobium cyclicum ALM1 exodeoxyribonuclease V subunit beta YP_004536778.1 659103 R 717773 CDS YP_004536779.1 334143623 10719330 complement(662617..665877) 1 NC_015581.1 TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: dps:DP1343 exodeoxyribonuclease V, gamma chain; PFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 665877 10719330 Thicy_0527 Thioalkalimicrobium cyclicum ALM1 exodeoxyribonuclease V subunit gamma YP_004536779.1 662617 R 717773 CDS YP_004536780.1 334143624 10719331 complement(666040..666888) 1 NC_015581.1 HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: tcx:Tcr_0723 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD 666888 10719331 Thicy_0528 Thioalkalimicrobium cyclicum ALM1 bifunctional protein folD YP_004536780.1 666040 R 717773 CDS YP_004536781.1 334143625 10719335 667482..668519 1 NC_015581.1 KEGG: hha:Hhal_1311 helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix DNA-binding protein 668519 10719335 Thicy_0529 Thioalkalimicrobium cyclicum ALM1 helix-hairpin-helix DNA-binding protein YP_004536781.1 667482 D 717773 CDS YP_004536782.1 334143626 10719336 669050..669823 1 NC_015581.1 KEGG: hypothetical protein; hypothetical protein 669823 10719336 Thicy_0530 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536782.1 669050 D 717773 CDS YP_004536783.1 334143627 10719337 669820..670725 1 NC_015581.1 PFAM: Protein of unknown function DUF1814; KEGG: cch:Cag_1199 hypothetical protein; hypothetical protein 670725 10719337 Thicy_0531 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536783.1 669820 D 717773 CDS YP_004536784.1 334143628 10719338 670838..671227 1 NC_015581.1 TIGRFAM: Addiction module antidote protein, HI1420; KEGG: mmw:Mmwyl1_3744 putative transcriptional regulator; addiction module antidote protein 671227 10719338 Thicy_0532 Thioalkalimicrobium cyclicum ALM1 addiction module antidote protein YP_004536784.1 670838 D 717773 CDS YP_004536785.1 334143629 10719339 complement(671656..672768) 1 NC_015581.1 KEGG: ppr:PBPRA1435 hypothetical protein; hypothetical protein 672768 10719339 Thicy_0533 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536785.1 671656 R 717773 CDS YP_004536786.1 334143630 10719340 673025..674833 1 NC_015581.1 PFAM: Protein of unknown function DUF2081; Protein of unknown function DUF262; KEGG: slp:Slip_0088 protein of unknown function DUF2081; hypothetical protein 674833 10719340 Thicy_0534 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536786.1 673025 D 717773 CDS YP_004536787.1 334143631 10719341 674943..677357 1 NC_015581.1 KEGG: tau:Tola_1180 type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; PFAM: DNA methylase, adenine-specific; type I restriction-modification system, M subunit 677357 10719341 Thicy_0535 Thioalkalimicrobium cyclicum ALM1 type I restriction-modification system, M subunit YP_004536787.1 674943 D 717773 CDS YP_004536788.1 334143632 10719342 677474..677761 1 NC_015581.1 PFAM: Protein of unknown function DUF2136; KEGG: eba:ebA7093 hypothetical protein; hypothetical protein 677761 10719342 Thicy_0536 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536788.1 677474 D 717773 CDS YP_004536789.1 334143633 10719343 677758..678162 1 NC_015581.1 KEGG: avn:Avin_17260 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 678162 10719343 Thicy_0537 Thioalkalimicrobium cyclicum ALM1 XRE family transcriptional regulator YP_004536789.1 677758 D 717773 CDS YP_004536790.1 334143634 10719344 678134..679528 1 NC_015581.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: bid:Bind_2673 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 679528 10719344 Thicy_0538 Thioalkalimicrobium cyclicum ALM1 restriction modification system DNA specificity domain-containing protein YP_004536790.1 678134 D 717773 CDS YP_004536791.1 334143635 10719345 679525..680157 1 NC_015581.1 PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: maq:Maqu_3381 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 680157 10719345 Thicy_0539 Thioalkalimicrobium cyclicum ALM1 filamentation induced by cAMP protein fic YP_004536791.1 679525 D 717773 CDS YP_004536792.1 334143636 10719346 complement(680154..680321) 1 NC_015581.1 hypothetical protein 680321 10719346 Thicy_0540 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536792.1 680154 R 717773 CDS YP_004536793.1 334143637 10719347 680460..683558 1 NC_015581.1 TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: tau:Tola_1185 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; HsdR family type I site-specific deoxyribonuclease 683558 10719347 Thicy_0541 Thioalkalimicrobium cyclicum ALM1 HsdR family type I site-specific deoxyribonuclease YP_004536793.1 680460 D 717773 CDS YP_004536794.1 334143638 10719348 683559..684281 1 NC_015581.1 PFAM: Protein of unknown function DUF45; KEGG: tau:Tola_1186 protein of unknown function DUF45; hypothetical protein 684281 10719348 Thicy_0542 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536794.1 683559 D 717773 CDS YP_004536795.1 334143639 10719349 685113..685796 1 NC_015581.1 KEGG: mru:mru_0776 hypothetical protein; hypothetical protein 685796 10719349 Thicy_0543 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536795.1 685113 D 717773 CDS YP_004536796.1 334143640 10719350 complement(685751..686788) 1 NC_015581.1 KEGG: tgr:Tgr7_1785 transcriptional regulator-like protein; transcriptional regulator-like protein 686788 10719350 Thicy_0544 Thioalkalimicrobium cyclicum ALM1 transcriptional regulator-like protein YP_004536796.1 685751 R 717773 CDS YP_004536797.1 334143641 10719351 686938..687723 1 NC_015581.1 PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: hhe:HH0572 hypothetical protein; silent information regulator protein Sir2 687723 10719351 Thicy_0545 Thioalkalimicrobium cyclicum ALM1 silent information regulator protein Sir2 YP_004536797.1 686938 D 717773 CDS YP_004536798.1 334143642 10719352 688235..689062 1 NC_015581.1 KEGG: tmz:Tmz1t_0298 hypothetical protein; hypothetical protein 689062 10719352 Thicy_0546 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536798.1 688235 D 717773 CDS YP_004536799.1 334143643 10719353 689073..690392 1 NC_015581.1 KEGG: tmz:Tmz1t_0299 hypothetical protein; hypothetical protein 690392 10719353 Thicy_0547 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536799.1 689073 D 717773 CDS YP_004536800.1 334143644 10719354 690775..692094 1 NC_015581.1 PFAM: RDD; KEGG: ppy:PPE_03516 predicted membrane protein/domain protein; RDD domain-containing protein 692094 10719354 Thicy_0548 Thioalkalimicrobium cyclicum ALM1 RDD domain-containing protein YP_004536800.1 690775 D 717773 CDS YP_004536801.1 334143645 10719355 692259..694472 1 NC_015581.1 KEGG: AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; AAA ATPase central domain-containing protein 694472 10719355 Thicy_0549 Thioalkalimicrobium cyclicum ALM1 AAA ATPase central domain-containing protein YP_004536801.1 692259 D 717773 CDS YP_004536802.1 334143646 10719356 694559..695821 1 NC_015581.1 KEGG: tdn:Suden_1853 ATPase; ATPase 695821 10719356 Thicy_0550 Thioalkalimicrobium cyclicum ALM1 ATPase YP_004536802.1 694559 D 717773 CDS YP_004536803.1 334143647 10719357 695935..696588 1 NC_015581.1 KEGG: maq:Maqu_1310 hypothetical protein; hypothetical protein 696588 10719357 Thicy_0551 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536803.1 695935 D 717773 CDS YP_004536804.1 334143648 10719358 696585..697289 1 NC_015581.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rpb:RPB_4516 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 697289 10719358 Thicy_0552 Thioalkalimicrobium cyclicum ALM1 N-formylglutamate amidohydrolase YP_004536804.1 696585 D 717773 CDS YP_004536805.1 334143649 10719360 complement(697590..697979) 1 NC_015581.1 hypothetical protein 697979 10719360 Thicy_0554 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536805.1 697590 R 717773 CDS YP_004536806.1 334143650 10719361 698437..699081 1 NC_015581.1 KEGG: hypothetical protein; hypothetical protein 699081 10719361 Thicy_0555 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536806.1 698437 D 717773 CDS YP_004536807.1 334143651 10719362 699205..700665 1 NC_015581.1 KEGG: sun:SUN_2298 hypothetical protein; hypothetical protein 700665 10719362 Thicy_0556 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536807.1 699205 D 717773 CDS YP_004536808.1 334143652 10719363 700677..702350 1 NC_015581.1 PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: cco:CCC13826_0951 thiamine-phosphate pyrophosphorylase; ATPase 702350 10719363 Thicy_0557 Thioalkalimicrobium cyclicum ALM1 ATPase YP_004536808.1 700677 D 717773 CDS YP_004536809.1 334143653 10719364 702353..703762 1 NC_015581.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: cco:CCC13826_0952 hypothetical protein; 5-methylcytosine restriction system component-like protein 703762 10719364 Thicy_0558 Thioalkalimicrobium cyclicum ALM1 5-methylcytosine restriction system component-like protein YP_004536809.1 702353 D 717773 CDS YP_004536810.1 334143654 10719365 703755..704558 1 NC_015581.1 KEGG: cpb:Cphamn1_2546 hypothetical protein; hypothetical protein 704558 10719365 Thicy_0559 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536810.1 703755 D 717773 CDS YP_004536811.1 334143655 10719366 704562..704846 1 NC_015581.1 hypothetical protein 704846 10719366 Thicy_0560 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536811.1 704562 D 717773 CDS YP_004536812.1 334143656 10719367 complement(704950..705654) 1 NC_015581.1 SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: tcx:Tcr_0930 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; DNA polymerase III subunit epsilon 705654 10719367 Thicy_0561 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit epsilon YP_004536812.1 704950 R 717773 CDS YP_004536813.1 334143657 10719368 705732..706157 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: tcx:Tcr_0931 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 706157 10719368 Thicy_0562 Thioalkalimicrobium cyclicum ALM1 FKBP-type peptidylprolyl isomerase YP_004536813.1 705732 D 717773 CDS YP_004536814.1 334143658 10719369 706166..706702 1 NC_015581.1 KEGG: tcx:Tcr_1335 hypothetical protein; hypothetical protein 706702 10719369 Thicy_0563 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536814.1 706166 D 717773 CDS YP_004536815.1 334143659 10719370 706785..710738 1 NC_015581.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Domain of unknown function DUF1605; Helicase-associated region; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_0950 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal; ATP-dependent helicase HrpA 710738 10719370 Thicy_0564 Thioalkalimicrobium cyclicum ALM1 ATP-dependent helicase HrpA YP_004536815.1 706785 D 717773 CDS YP_004536816.1 334143660 10719371 710801..711088 1 NC_015581.1 hypothetical protein 711088 10719371 Thicy_0565 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536816.1 710801 D 717773 CDS YP_004536817.1 334143661 10719372 complement(711128..712654) 1 NC_015581.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; KEGG: cyt:cce_4682 putative phosphoglucomutases; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 712654 10719372 Thicy_0566 Thioalkalimicrobium cyclicum ALM1 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004536817.1 711128 R 717773 CDS YP_004536818.1 334143662 10719373 712770..713252 1 NC_015581.1 KEGG: cpc:Cpar_1634 Sel1 domain protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 713252 10719373 Thicy_0567 Thioalkalimicrobium cyclicum ALM1 Sel1 domain-containing protein repeat-containing protein YP_004536818.1 712770 D 717773 CDS YP_004536819.1 334143663 10719374 713341..713628 1 NC_015581.1 KEGG: dps:DP1779 hypothetical protein; hypothetical protein 713628 10719374 Thicy_0568 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536819.1 713341 D 717773 CDS YP_004536820.1 334143664 10719375 713632..714219 1 NC_015581.1 PFAM: Protein of unknown function DUF2058; KEGG: tcx:Tcr_1070 putative nucleoprotein/polynucleotide-associated enzyme; hypothetical protein 714219 10719375 Thicy_0569 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536820.1 713632 D 717773 CDS YP_004536821.1 334143665 10719376 complement(714209..715288) 1 NC_015581.1 KEGG: amc:MADE_01559 hypothetical protein; hypothetical protein 715288 10719376 Thicy_0570 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536821.1 714209 R 717773 CDS YP_004536822.1 334143666 10719377 complement(715298..716236) 1 NC_015581.1 PFAM: Periplasmic binding protein; KEGG: tcx:Tcr_0962 periplasmic binding protein; ABC transporter substrate-binding protein 716236 10719377 Thicy_0571 Thioalkalimicrobium cyclicum ALM1 ABC transporter substrate-binding protein YP_004536822.1 715298 R 717773 CDS YP_004536823.1 334143667 10719378 complement(716236..716844) 1 NC_015581.1 TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: tbd:Tbd_2718 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase 716844 10719378 Thicy_0572 Thioalkalimicrobium cyclicum ALM1 cob(I)alamin adenosyltransferase YP_004536823.1 716236 R 717773 CDS YP_004536824.1 334143668 10719379 716974..717768 1 NC_015581.1 PFAM: Protein of unknown function DUF980; KEGG: tcx:Tcr_2033 hypothetical protein; hypothetical protein 717768 10719379 Thicy_0573 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536824.1 716974 D 717773 CDS YP_004536825.1 334143669 10719380 complement(717780..718052) 1 NC_015581.1 PFAM: Protein of unknown function DUF2132; KEGG: spe:Spro_1318 hypothetical protein; hypothetical protein 718052 10719380 Thicy_0574 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536825.1 717780 R 717773 CDS YP_004536826.1 334143670 10719381 complement(718057..718248) 1 NC_015581.1 PFAM: YaeQ; KEGG: pat:Patl_3118 YaeQ; YaeQ family protein 718248 10719381 Thicy_0575 Thioalkalimicrobium cyclicum ALM1 YaeQ family protein YP_004536826.1 718057 R 717773 CDS YP_004536827.1 334143671 10719382 complement(718273..718614) 1 NC_015581.1 KEGG: rfr:Rfer_0180 HicB; HicB family protein 718614 10719382 Thicy_0576 Thioalkalimicrobium cyclicum ALM1 HicB family protein YP_004536827.1 718273 R 717773 CDS YP_004536828.1 334143672 10719383 complement(718611..718865) 1 NC_015581.1 KEGG: rfr:Rfer_0179 HicA protein; HicA protein 718865 10719383 Thicy_0577 Thioalkalimicrobium cyclicum ALM1 HicA protein YP_004536828.1 718611 R 717773 CDS YP_004536829.1 334143673 10719384 complement(718969..720825) 1 NC_015581.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: tcx:Tcr_0963 TonB-dependent receptor; TonB-dependent receptor plug 720825 10719384 Thicy_0578 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor plug YP_004536829.1 718969 R 717773 CDS YP_004536830.1 334143674 10719385 complement(721216..721443) 1 NC_015581.1 hypothetical protein 721443 10719385 Thicy_0579 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536830.1 721216 R 717773 CDS YP_004536831.1 334143675 10719386 complement(721447..721875) 1 NC_015581.1 PFAM: Protein of unknown function DUF1841; KEGG: tcx:Tcr_0966 hypothetical protein; hypothetical protein 721875 10719386 Thicy_0580 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536831.1 721447 R 717773 CDS YP_004536832.1 334143676 10719387 complement(721926..722567) 1 NC_015581.1 SMART: HhH-GPD domain; TIGRFAM: Endonuclease III/Nth; KEGG: tcx:Tcr_1030 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III 722567 10719387 Thicy_0581 Thioalkalimicrobium cyclicum ALM1 endonuclease III YP_004536832.1 721926 R 717773 CDS YP_004536833.1 334143677 10719388 complement(722564..723280) 1 NC_015581.1 TIGRFAM: Electron transport complex, RnfE; HAMAP: Electron transport complex protein rnfE; KEGG: tcx:Tcr_1031 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfE 723280 10719388 Thicy_0582 Thioalkalimicrobium cyclicum ALM1 Electron transport complex protein rnfE YP_004536833.1 722564 R 717773 CDS YP_004536834.1 334143678 10719389 complement(723273..723896) 1 NC_015581.1 KEGG: tcx:Tcr_1032 electron transport complex, RnfABCDGE type, G subunit; TIGRFAM: Electron transport complex, RnfG; PFAM: FMN-binding; RnfABCDGE type electron transport complex subunit G 723896 10719389 Thicy_0583 Thioalkalimicrobium cyclicum ALM1 RnfABCDGE type electron transport complex subunit G YP_004536834.1 723273 R 717773 CDS YP_004536835.1 334143679 10719390 complement(723893..724921) 1 NC_015581.1 TIGRFAM: Electron transport complex, RnfD; HAMAP: Electron transport complex protein rnfD; KEGG: tcx:Tcr_1033 electron transport complex, RnfABCDGE type, D subunit; PFAM: NADH-quinone reductase NQR2/RnfD; Electron transport complex protein rnfD 724921 10719390 Thicy_0584 Thioalkalimicrobium cyclicum ALM1 Electron transport complex protein rnfD YP_004536835.1 723893 R 717773 CDS YP_004536836.1 334143680 10719391 complement(724914..726593) 1 NC_015581.1 TIGRFAM: Electron transport complex, RnfC; HAMAP: Electron transport complex protein rnfC; KEGG: tcx:Tcr_1034 electron transport complex, RnfABCDGE type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; electron transport complex protein RnfC 726593 10719391 Thicy_0585 Thioalkalimicrobium cyclicum ALM1 electron transport complex protein RnfC YP_004536836.1 724914 R 717773 CDS YP_004536837.1 334143681 10719392 complement(726590..727168) 1 NC_015581.1 TIGRFAM: Electron transport complex, RnfB; HAMAP: Electron transport complex, RnfB, subgroup; KEGG: tcx:Tcr_1035 electron transport complex, RnfABCDGE type, B subunit; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Electron transport complex protein rnfB 727168 10719392 Thicy_0586 Thioalkalimicrobium cyclicum ALM1 Electron transport complex protein rnfB YP_004536837.1 726590 R 717773 CDS YP_004536838.1 334143682 10719393 complement(727165..727743) 1 NC_015581.1 TIGRFAM: Electron transport complex, RnfA; HAMAP: Electron transport complex protein rnfA; KEGG: tcx:Tcr_1036 electron transport complex, RnfABCDGE type, A subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfA 727743 10719393 Thicy_0587 Thioalkalimicrobium cyclicum ALM1 Electron transport complex protein rnfA YP_004536838.1 727165 R 717773 CDS YP_004536839.1 334143683 10719394 complement(727772..729820) 1 NC_015581.1 PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: tcx:Tcr_1037 methionyl-tRNA synthetase; methionyl-tRNA synthetase 729820 10719394 Thicy_0588 Thioalkalimicrobium cyclicum ALM1 methionyl-tRNA synthetase YP_004536839.1 727772 R 717773 CDS YP_004536840.1 334143684 10719395 complement(729886..731022) 1 NC_015581.1 PFAM: ATPase-like, ParA/MinD; KEGG: tcx:Tcr_1042 putative ATP-binding protein; ParA/MinD-like ATPase 731022 10719395 Thicy_0589 Thioalkalimicrobium cyclicum ALM1 ParA/MinD-like ATPase YP_004536840.1 729886 R 717773 CDS YP_004536841.1 334143685 10719396 complement(731113..731727) 1 NC_015581.1 TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: tcx:Tcr_1043 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxycytidine triphosphate deaminase 731727 10719396 Thicy_0590 Thioalkalimicrobium cyclicum ALM1 Deoxycytidine triphosphate deaminase YP_004536841.1 731113 R 717773 CDS YP_004536842.1 334143686 10719397 complement(731744..732490) 1 NC_015581.1 KEGG: tcx:Tcr_1044 hypothetical protein; hypothetical protein 732490 10719397 Thicy_0591 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536842.1 731744 R 717773 CDS YP_004536843.1 334143687 10719398 complement(732494..733171) 1 NC_015581.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: pau:PA14_52050 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase 733171 10719398 Thicy_0592 Thioalkalimicrobium cyclicum ALM1 phosphoribosylglycinamide formyltransferase YP_004536843.1 732494 R 717773 CDS YP_004536844.1 334143688 10719399 complement(733178..734218) 1 NC_015581.1 TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; Bacteriocin-type signal sequence motif; KEGG: tcx:Tcr_1046 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 734218 10719399 Thicy_0593 Thioalkalimicrobium cyclicum ALM1 phosphoribosylformylglycinamidine cyclo-ligase YP_004536844.1 733178 R 717773 CDS YP_004536845.1 334143689 10719400 734334..735413 1 NC_015581.1 PFAM: Protein of unknown function DUF2066; KEGG: tcx:Tcr_1047 hypothetical protein; hypothetical protein 735413 10719400 Thicy_0594 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536845.1 734334 D 717773 CDS YP_004536846.1 334143690 10719401 735434..736138 1 NC_015581.1 TIGRFAM: Chromosomal replication control, regulator Hda; KEGG: tcx:Tcr_1048 chromosomal replication initiator protein DnaA; DnaA regulatory inactivator Hda 736138 10719401 Thicy_0595 Thioalkalimicrobium cyclicum ALM1 DnaA regulatory inactivator Hda YP_004536846.1 735434 D 717773 CDS YP_004536847.1 334143691 10719402 736197..736700 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1049 thioredoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 736700 10719402 Thicy_0596 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004536847.1 736197 D 717773 CDS YP_004536848.1 334143692 10719403 736711..737223 1 NC_015581.1 KEGG: tcx:Tcr_0523 hypothetical protein; hypothetical protein 737223 10719403 Thicy_0597 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536848.1 736711 D 717773 CDS YP_004536849.1 334143693 10719404 737235..738548 1 NC_015581.1 PFAM: Outer membrane efflux protein; KEGG: tcx:Tcr_0524 outer membrane efflux protein; outer membrane efflux protein 738548 10719404 Thicy_0598 Thioalkalimicrobium cyclicum ALM1 outer membrane efflux protein YP_004536849.1 737235 D 717773 CDS YP_004536850.1 334143694 10719405 738541..739080 1 NC_015581.1 KEGG: tcx:Tcr_0525 hypothetical protein; hypothetical protein 739080 10719405 Thicy_0599 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536850.1 738541 D 717773 CDS YP_004536851.1 334143695 10719406 739073..739324 1 NC_015581.1 KEGG: tcx:Tcr_1050 hypothetical protein; hypothetical protein 739324 10719406 Thicy_0600 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536851.1 739073 D 717773 CDS YP_004536852.1 334143696 10719407 complement(739371..741086) 1 NC_015581.1 TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: tcx:Tcr_1075 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; prolyl-tRNA synthetase 741086 10719407 Thicy_0601 Thioalkalimicrobium cyclicum ALM1 prolyl-tRNA synthetase YP_004536852.1 739371 R 717773 CDS YP_004536853.1 334143697 10719408 741231..741863 1 NC_015581.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: tcx:Tcr_1507 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 741863 10719408 Thicy_0602 Thioalkalimicrobium cyclicum ALM1 Septum formation protein Maf YP_004536853.1 741231 D 717773 CDS YP_004536854.1 334143698 10719409 741860..743332 1 NC_015581.1 KEGG: tcx:Tcr_1506 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 743332 10719409 Thicy_0603 Thioalkalimicrobium cyclicum ALM1 ribonuclease, Rne/Rng family YP_004536854.1 741860 D 717773 CDS YP_004536855.1 334143699 10719415 complement(749191..749949) 1 NC_015581.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: tcx:Tcr_0387 UBA/ThiF-type NAD/FAD binding fold protein; UBA/THIF-type NAD/FAD binding protein 749949 10719415 Thicy_0604 Thioalkalimicrobium cyclicum ALM1 UBA/THIF-type NAD/FAD binding protein YP_004536855.1 749191 R 717773 CDS YP_004536856.1 334143700 10719416 complement(749960..750829) 1 NC_015581.1 KEGG: mmb:Mmol_2242 modification methylase, HemK family; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase 750829 10719416 Thicy_0605 Thioalkalimicrobium cyclicum ALM1 protein-(glutamine-N5) methyltransferase YP_004536856.1 749960 R 717773 CDS YP_004536857.1 334143701 10719417 complement(750833..751921) 1 NC_015581.1 TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: tcx:Tcr_0389 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 1 751921 10719417 Thicy_0606 Thioalkalimicrobium cyclicum ALM1 peptide chain release factor 1 YP_004536857.1 750833 R 717773 CDS YP_004536858.1 334143702 10719418 complement(751945..753222) 1 NC_015581.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: tcx:Tcr_0390 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; glutamyl-tRNA reductase 753222 10719418 Thicy_0607 Thioalkalimicrobium cyclicum ALM1 glutamyl-tRNA reductase YP_004536858.1 751945 R 717773 CDS YP_004536859.1 334143703 10719419 753474..753962 1 NC_015581.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; KEGG: hna:Hneap_0194 L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase 753962 10719419 Thicy_0608 Thioalkalimicrobium cyclicum ALM1 L-2,4-diaminobutyric acid acetyltransferase YP_004536859.1 753474 D 717773 CDS YP_004536860.1 334143704 10719420 754038..755324 1 NC_015581.1 TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: hna:Hneap_0195 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III; diaminobutyrate/2-oxoglutarate aminotransferase 755324 10719420 Thicy_0609 Thioalkalimicrobium cyclicum ALM1 diaminobutyrate/2-oxoglutarate aminotransferase YP_004536860.1 754038 D 717773 CDS YP_004536861.1 334143705 10719421 755348..755740 1 NC_015581.1 HAMAP: L-ectoine synthase; KEGG: hna:Hneap_0196 L-ectoine synthase; PFAM: Ectoine synthase; L-ectoine synthase 755740 10719421 Thicy_0610 Thioalkalimicrobium cyclicum ALM1 L-ectoine synthase YP_004536861.1 755348 D 717773 CDS YP_004536862.1 334143706 10719422 complement(755795..756376) 1 NC_015581.1 TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Signal transduction response regulator, receiver region; HTH transcriptional regulator, MerR; KEGG: dar:Daro_0562 excisionase/Xis, DNA-binding; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein 756376 10719422 Thicy_0611 Thioalkalimicrobium cyclicum ALM1 response regulator receiver protein YP_004536862.1 755795 R 717773 CDS YP_004536863.1 334143707 10719423 756607..756888 1 NC_015581.1 PFAM: Heavy metal transport/detoxification protein; KEGG: tcx:Tcr_0383 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 756888 10719423 Thicy_0612 Thioalkalimicrobium cyclicum ALM1 heavy metal transport/detoxification protein YP_004536863.1 756607 D 717773 CDS YP_004536864.1 334143708 10719424 756893..759121 1 NC_015581.1 SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: tcx:Tcr_0384 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA topoisomerase IV subunit A 759121 10719424 Thicy_0613 Thioalkalimicrobium cyclicum ALM1 DNA topoisomerase IV subunit A YP_004536864.1 756893 D 717773 CDS YP_004536865.1 334143709 10719425 complement(759153..759746) 1 NC_015581.1 PFAM: Methyltransferase type 11; KEGG: syn:slr1183 hypothetical protein; type 11 methyltransferase 759746 10719425 Thicy_0614 Thioalkalimicrobium cyclicum ALM1 type 11 methyltransferase YP_004536865.1 759153 R 717773 CDS YP_004536866.1 334143710 10719426 complement(759774..760430) 1 NC_015581.1 KEGG: tcx:Tcr_0794 hypothetical protein; hypothetical protein 760430 10719426 Thicy_0615 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536866.1 759774 R 717773 CDS YP_004536867.1 334143711 10719427 760552..761967 1 NC_015581.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: tcx:Tcr_0795 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 761967 10719427 Thicy_0616 Thioalkalimicrobium cyclicum ALM1 3-isopropylmalate dehydratase large subunit YP_004536867.1 760552 D 717773 CDS YP_004536868.1 334143712 10719428 761979..762638 1 NC_015581.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: mmb:Mmol_0973 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 762638 10719428 Thicy_0617 Thioalkalimicrobium cyclicum ALM1 3-isopropylmalate dehydratase small subunit YP_004536868.1 761979 D 717773 CDS YP_004536869.1 334143713 10719429 762661..763734 1 NC_015581.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: tcx:Tcr_0797 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 763734 10719429 Thicy_0618 Thioalkalimicrobium cyclicum ALM1 3-isopropylmalate dehydrogenase YP_004536869.1 762661 D 717773 CDS YP_004536870.1 334143714 10719430 763746..764720 1 NC_015581.1 PFAM: Peptidase M23; KEGG: tcx:Tcr_0798 peptidase M23B; peptidase M23 764720 10719430 Thicy_0619 Thioalkalimicrobium cyclicum ALM1 peptidase M23 YP_004536870.1 763746 D 717773 CDS YP_004536871.1 334143715 10719431 764814..765833 1 NC_015581.1 TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: tcx:Tcr_0800 aspartate-semialdehyde dehydrogenase, USG-1 related; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 765833 10719431 Thicy_0620 Thioalkalimicrobium cyclicum ALM1 aspartate-semialdehyde dehydrogenase YP_004536871.1 764814 D 717773 CDS YP_004536872.1 334143716 10719432 765833..766615 1 NC_015581.1 TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: tcx:Tcr_0801 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 766615 10719432 Thicy_0621 Thioalkalimicrobium cyclicum ALM1 tRNA pseudouridine synthase A YP_004536872.1 765833 D 717773 CDS YP_004536873.1 334143717 10719433 766609..767238 1 NC_015581.1 KEGG: nve:NEMVE_v1g145157 hypothetical protein; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 767238 10719433 Thicy_0622 Thioalkalimicrobium cyclicum ALM1 phosphoribosylanthranilate isomerase YP_004536873.1 766609 D 717773 CDS YP_004536874.1 334143718 10719434 767248..768471 1 NC_015581.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: tcx:Tcr_0803 tryptophan synthase subunit beta; Tryptophan synthase subunit beta 768471 10719434 Thicy_0623 Thioalkalimicrobium cyclicum ALM1 Tryptophan synthase subunit beta YP_004536874.1 767248 D 717773 CDS YP_004536875.1 334143719 10719435 768482..769309 1 NC_015581.1 PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: tcx:Tcr_0804 tryptophan synthase, alpha subunit; Tryptophan synthase subunit alpha 769309 10719435 Thicy_0624 Thioalkalimicrobium cyclicum ALM1 Tryptophan synthase subunit alpha YP_004536875.1 768482 D 717773 CDS YP_004536876.1 334143720 10719436 769306..770157 1 NC_015581.1 PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: tcx:Tcr_0805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 770157 10719436 Thicy_0625 Thioalkalimicrobium cyclicum ALM1 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_004536876.1 769306 D 717773 CDS YP_004536877.1 334143721 10719437 770164..771489 1 NC_015581.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: tcx:Tcr_0806 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 771489 10719437 Thicy_0626 Thioalkalimicrobium cyclicum ALM1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004536877.1 770164 D 717773 CDS YP_004536878.1 334143722 10719438 771482..772057 1 NC_015581.1 PFAM: Sporulation/cell division region, bacteria; KEGG: tcx:Tcr_0807 sporulation related; sporulation domain-containing protein 772057 10719438 Thicy_0627 Thioalkalimicrobium cyclicum ALM1 sporulation domain-containing protein YP_004536878.1 771482 D 717773 CDS YP_004536879.1 334143723 10719439 772127..773650 1 NC_015581.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: tcx:Tcr_0808 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 773650 10719439 Thicy_0628 Thioalkalimicrobium cyclicum ALM1 amidophosphoribosyltransferase YP_004536879.1 772127 D 717773 CDS YP_004536880.1 334143724 10719440 773651..774832 1 NC_015581.1 TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: tcx:Tcr_0809 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase 774832 10719440 Thicy_0629 Thioalkalimicrobium cyclicum ALM1 O-succinylhomoserine sulfhydrylase YP_004536880.1 773651 D 717773 CDS YP_004536881.1 334143725 10719441 complement(774846..775145) 1 NC_015581.1 KEGG: asu:Asuc_1458 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain; RNA-binding, CRM domain-containing protein 775145 10719441 Thicy_0630 Thioalkalimicrobium cyclicum ALM1 RNA-binding, CRM domain-containing protein YP_004536881.1 774846 R 717773 CDS YP_004536882.1 334143726 10719442 775232..775849 1 NC_015581.1 KEGG: tcx:Tcr_0811 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase E 775849 10719442 Thicy_0631 Thioalkalimicrobium cyclicum ALM1 ribosomal RNA large subunit methyltransferase E YP_004536882.1 775232 D 717773 CDS YP_004536883.1 334143727 10719443 775960..777930 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: tcx:Tcr_0812 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 777930 10719443 Thicy_0632 Thioalkalimicrobium cyclicum ALM1 ATP-dependent metalloprotease FtsH YP_004536883.1 775960 D 717773 CDS YP_004536884.1 334143728 10719444 778004..778849 1 NC_015581.1 TIGRFAM: Dihydropteroate synthase; KEGG: tcx:Tcr_0813 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; dihydropteroate synthase 778849 10719444 Thicy_0633 Thioalkalimicrobium cyclicum ALM1 dihydropteroate synthase YP_004536884.1 778004 D 717773 CDS YP_004536885.1 334143729 10719445 778846..780183 1 NC_015581.1 TIGRFAM: Phosphoglucosamine mutase; KEGG: tcx:Tcr_0814 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase 780183 10719445 Thicy_0634 Thioalkalimicrobium cyclicum ALM1 phosphoglucosamine mutase YP_004536885.1 778846 D 717773 CDS YP_004536886.1 334143730 10719446 780252..781022 1 NC_015581.1 PFAM: Triosephosphate isomerase; manually curated; KEGG: tcx:Tcr_0815 triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; triosephosphate isomerase 781022 10719446 Thicy_0635 Thioalkalimicrobium cyclicum ALM1 triosephosphate isomerase YP_004536886.1 780252 D 717773 CDS YP_004536887.1 334143731 10719447 781010..781321 1 NC_015581.1 KEGG: tcx:Tcr_0816 preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 781321 10719447 Thicy_0636 Thioalkalimicrobium cyclicum ALM1 preprotein translocase subunit SecG YP_004536887.1 781010 D 717773 CDS YP_004536888.1 334143732 10719449 781467..781823 1 NC_015581.1 KEGG: tcx:Tcr_0817 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 781823 10719449 Thicy_0637 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit 3 YP_004536888.1 781467 D 717773 CDS YP_004536889.1 334143733 10719450 781814..782290 1 NC_015581.1 PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: tcx:Tcr_0818 NADH dehydrogenase subunit B; NAD(P)H-quinone oxidoreductase subunit K 782290 10719450 Thicy_0638 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit K YP_004536889.1 781814 D 717773 CDS YP_004536890.1 334143734 10719451 782320..782973 1 NC_015581.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: tcx:Tcr_0819 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J 782973 10719451 Thicy_0639 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit J YP_004536890.1 782320 D 717773 CDS YP_004536891.1 334143735 10719452 782991..784244 1 NC_015581.1 PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: tcx:Tcr_0820 NADH dehydrogenase subunit D; NAD(P)H-quinone oxidoreductase subunit H 784244 10719452 Thicy_0640 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit H YP_004536891.1 782991 D 717773 CDS YP_004536892.1 334143736 10719453 784241..784744 1 NC_015581.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: tcx:Tcr_0821 NADH-quinone oxidoreductase, E subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH-quinone oxidoreductase subunit E 784744 10719453 Thicy_0641 Thioalkalimicrobium cyclicum ALM1 NADH-quinone oxidoreductase subunit E YP_004536892.1 784241 D 717773 CDS YP_004536893.1 334143737 10719454 784748..786031 1 NC_015581.1 TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: tcx:Tcr_0822 NADH-quinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 786031 10719454 Thicy_0642 Thioalkalimicrobium cyclicum ALM1 NADH-quinone oxidoreductase subunit F YP_004536893.1 784748 D 717773 CDS YP_004536894.1 334143738 10719455 786065..788179 1 NC_015581.1 TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: tcx:Tcr_0823 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; NADH-quinone oxidoreductase subunit G 788179 10719455 Thicy_0643 Thioalkalimicrobium cyclicum ALM1 NADH-quinone oxidoreductase subunit G YP_004536894.1 786065 D 717773 CDS YP_004536895.1 334143739 10719456 788195..789256 1 NC_015581.1 HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: tcx:Tcr_0824 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; NAD(P)H-quinone oxidoreductase subunit 1 789256 10719456 Thicy_0644 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit 1 YP_004536895.1 788195 D 717773 CDS YP_004536896.1 334143740 10719457 789269..789760 1 NC_015581.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: tcx:Tcr_0825 NADH dehydrogenase subunit I; NAD(P)H-quinone oxidoreductase subunit I 789760 10719457 Thicy_0645 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit I YP_004536896.1 789269 D 717773 CDS YP_004536897.1 334143741 10719458 789793..790434 1 NC_015581.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: tcx:Tcr_0826 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 790434 10719458 Thicy_0646 Thioalkalimicrobium cyclicum ALM1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004536897.1 789793 D 717773 CDS YP_004536898.1 334143742 10719459 790437..790742 1 NC_015581.1 KEGG: tcx:Tcr_0827 NADH-ubiquinone oxidoreductase, chain 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; NAD(P)H-quinone oxidoreductase subunit 4L 790742 10719459 Thicy_0647 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit 4L YP_004536898.1 790437 D 717773 CDS YP_004536899.1 334143743 10719460 790746..792728 1 NC_015581.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: tcx:Tcr_0828 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase subunit L 792728 10719460 Thicy_0648 Thioalkalimicrobium cyclicum ALM1 proton-translocating NADH-quinone oxidoreductase subunit L YP_004536899.1 790746 D 717773 CDS YP_004536900.1 334143744 10719461 792759..794276 1 NC_015581.1 TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: tcx:Tcr_0829 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M 794276 10719461 Thicy_0649 Thioalkalimicrobium cyclicum ALM1 proton-translocating NADH-quinone oxidoreductase subunit M YP_004536900.1 792759 D 717773 CDS YP_004536901.1 334143745 10719462 794306..795748 1 NC_015581.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: tcx:Tcr_0830 NADH dehydrogenase subunit N; NAD(P)H-quinone oxidoreductase subunit 2 795748 10719462 Thicy_0650 Thioalkalimicrobium cyclicum ALM1 NAD(P)H-quinone oxidoreductase subunit 2 YP_004536901.1 794306 D 717773 CDS YP_004536902.1 334143746 10719463 795829..796182 1 NC_015581.1 KEGG: tcx:Tcr_0831 hypothetical protein; hypothetical protein 796182 10719463 Thicy_0651 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536902.1 795829 D 717773 CDS YP_004536903.1 334143747 10719465 796469..797824 1 NC_015581.1 PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: tcx:Tcr_1677 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 797824 10719465 Thicy_0652 Thioalkalimicrobium cyclicum ALM1 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004536903.1 796469 D 717773 CDS YP_004536904.1 334143748 10719466 complement(797857..798336) 1 NC_015581.1 KEGG: tcx:Tcr_1326 peptidylprolyl isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidyl-prolyl isomerase 798336 10719466 Thicy_0653 Thioalkalimicrobium cyclicum ALM1 peptidyl-prolyl isomerase YP_004536904.1 797857 R 717773 CDS YP_004536905.1 334143749 10719467 798416..798844 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0093; KEGG: tcx:Tcr_1325 hypothetical protein; hypothetical protein 798844 10719467 Thicy_0654 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536905.1 798416 D 717773 CDS YP_004536906.1 334143750 10719468 798942..800534 1 NC_015581.1 KEGG: tcx:Tcr_1606 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 800534 10719468 Thicy_0655 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004536906.1 798942 D 717773 CDS YP_004536907.1 334143751 10719469 complement(800566..801390) 1 NC_015581.1 PFAM: Ion transport; KEGG: jan:Jann_0087 ion transport protein; Ion transport protein 801390 10719469 Thicy_0656 Thioalkalimicrobium cyclicum ALM1 Ion transport protein YP_004536907.1 800566 R 717773 CDS YP_004536908.1 334143752 10719470 801534..801971 1 NC_015581.1 hypothetical protein 801971 10719470 Thicy_0657 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536908.1 801534 D 717773 CDS YP_004536909.1 334143753 10719473 802549..803862 1 NC_015581.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: tcx:Tcr_1176 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; trigger factor Tig 803862 10719473 Thicy_0658 Thioalkalimicrobium cyclicum ALM1 trigger factor Tig YP_004536909.1 802549 D 717773 CDS YP_004536910.1 334143754 10719474 804034..804639 1 NC_015581.1 PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: tcx:Tcr_1177 ATP-dependent Clp protease proteolytic subunit; ATP-dependent Clp protease proteolytic subunit 804639 10719474 Thicy_0659 Thioalkalimicrobium cyclicum ALM1 ATP-dependent Clp protease proteolytic subunit YP_004536910.1 804034 D 717773 CDS YP_004536911.1 334143755 10719475 804657..805907 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: tcx:Tcr_1178 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit clpX 805907 10719475 Thicy_0660 Thioalkalimicrobium cyclicum ALM1 ATP-dependent Clp protease ATP-binding subunit clpX YP_004536911.1 804657 D 717773 CDS YP_004536912.1 334143756 10719476 805922..808327 1 NC_015581.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: tcx:Tcr_1179 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; anti-sigma H sporulation factor LonB 808327 10719476 Thicy_0661 Thioalkalimicrobium cyclicum ALM1 anti-sigma H sporulation factor LonB YP_004536912.1 805922 D 717773 CDS YP_004536913.1 334143757 10719481 complement(808901..810118) 1 NC_015581.1 KEGG: tcx:Tcr_1132 transcription factor jumonji, JmjC; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; Cupin 4 family protein 810118 10719481 Thicy_0662 Thioalkalimicrobium cyclicum ALM1 Cupin 4 family protein YP_004536913.1 808901 R 717773 CDS YP_004536914.1 334143758 10719482 complement(810120..811541) 1 NC_015581.1 TIGRFAM: Adenylosuccinate lyase; KEGG: tcx:Tcr_1137 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; adenylosuccinate lyase 811541 10719482 Thicy_0663 Thioalkalimicrobium cyclicum ALM1 adenylosuccinate lyase YP_004536914.1 810120 R 717773 CDS YP_004536915.1 334143759 10719483 811709..814282 1 NC_015581.1 KEGG: tcx:Tcr_1142 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: Aconitase B, bacterial; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; aconitate hydratase 2 814282 10719483 Thicy_0664 Thioalkalimicrobium cyclicum ALM1 aconitate hydratase 2 YP_004536915.1 811709 D 717773 CDS YP_004536916.1 334143760 10719484 complement(814346..815134) 1 NC_015581.1 KEGG: tcx:Tcr_0902 hypothetical protein; hypothetical protein 815134 10719484 Thicy_0665 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536916.1 814346 R 717773 CDS YP_004536917.1 334143761 10719485 815198..815452 1 NC_015581.1 KEGG: tcx:Tcr_0903 hypothetical protein; hypothetical protein 815452 10719485 Thicy_0666 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536917.1 815198 D 717773 CDS YP_004536918.1 334143762 10719486 complement(815454..816350) 1 NC_015581.1 PFAM: ABC-3; KEGG: tcx:Tcr_2146 hypothetical protein; ABC transporter permease 816350 10719486 Thicy_0667 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004536918.1 815454 R 717773 CDS YP_004536919.1 334143763 10719487 complement(816343..817203) 1 NC_015581.1 PFAM: ABC-3; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transport systems permease components; ABC transporter permease 817203 10719487 Thicy_0668 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004536919.1 816343 R 717773 CDS YP_004536920.1 334143764 10719488 complement(817200..817961) 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_2148 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 817961 10719488 Thicy_0669 Thioalkalimicrobium cyclicum ALM1 phosphonate-transporting ATPase YP_004536920.1 817200 R 717773 CDS YP_004536921.1 334143765 10719489 complement(817958..818893) 1 NC_015581.1 PFAM: ABC transporter metal-binding lipoprotein; KEGG: tcx:Tcr_2149 periplasmic solute binding protein; heavy metal ABC transporter substrate-binding protein 818893 10719489 Thicy_0670 Thioalkalimicrobium cyclicum ALM1 heavy metal ABC transporter substrate-binding protein YP_004536921.1 817958 R 717773 CDS YP_004536922.1 334143766 10719490 819021..819689 1 NC_015581.1 KEGG: tcx:Tcr_0904 iron dependent repressor; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; DtxR family iron (metal) dependent repressor 819689 10719490 Thicy_0671 Thioalkalimicrobium cyclicum ALM1 DtxR family iron (metal) dependent repressor YP_004536922.1 819021 D 717773 CDS YP_004536923.1 334143767 10719491 819686..820747 1 NC_015581.1 KEGG: tcx:Tcr_0905 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; signal transduction histidine kinase, nitrogen specific, NtrB 820747 10719491 Thicy_0672 Thioalkalimicrobium cyclicum ALM1 signal transduction histidine kinase, nitrogen specific, NtrB YP_004536923.1 819686 D 717773 CDS YP_004536924.1 334143768 10719492 820744..822192 1 NC_015581.1 TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: tcx:Tcr_0906 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family nitrogen metabolism transcriptional regulator NtrC 822192 10719492 Thicy_0673 Thioalkalimicrobium cyclicum ALM1 Fis family nitrogen metabolism transcriptional regulator NtrC YP_004536924.1 820744 D 717773 CDS YP_004536925.1 334143769 10719493 complement(822260..822598) 1 NC_015581.1 PFAM: Nitrogen regulatory protein PII; KEGG: tcx:Tcr_0912 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 822598 10719493 Thicy_0674 Thioalkalimicrobium cyclicum ALM1 nitrogen regulatory protein P-II YP_004536925.1 822260 R 717773 CDS YP_004536926.1 334143770 10719494 complement(822600..823517) 1 NC_015581.1 TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: tcx:Tcr_0913 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase proenzyme 823517 10719494 Thicy_0675 Thioalkalimicrobium cyclicum ALM1 phosphatidylserine decarboxylase proenzyme YP_004536926.1 822600 R 717773 CDS YP_004536927.1 334143771 10719495 823658..824875 1 NC_015581.1 PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: tcx:Tcr_0914 argininosuccinate synthase; argininosuccinate synthase 824875 10719495 Thicy_0676 Thioalkalimicrobium cyclicum ALM1 argininosuccinate synthase YP_004536927.1 823658 D 717773 CDS YP_004536928.1 334143772 10719496 824890..825375 1 NC_015581.1 manually curated; KEGG: tcx:Tcr_0915 phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase 825375 10719496 Thicy_0677 Thioalkalimicrobium cyclicum ALM1 phosphatidylglycerophosphatase YP_004536928.1 824890 D 717773 CDS YP_004536929.1 334143773 10719497 825383..825676 1 NC_015581.1 KEGG: tcx:Tcr_0916 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 825676 10719497 Thicy_0678 Thioalkalimicrobium cyclicum ALM1 rhodanese-like protein YP_004536929.1 825383 D 717773 CDS YP_004536930.1 334143774 10719498 825750..827006 1 NC_015581.1 PFAM: Sodium:dicarboxylate symporter; KEGG: tcx:Tcr_0917 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 827006 10719498 Thicy_0679 Thioalkalimicrobium cyclicum ALM1 sodium:dicarboxylate symporter YP_004536930.1 825750 D 717773 CDS YP_004536931.1 334143775 10719499 complement(827003..827746) 1 NC_015581.1 HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: tcx:Tcr_0919 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 827746 10719499 Thicy_0680 Thioalkalimicrobium cyclicum ALM1 UDP-2,3-diacylglucosamine hydrolase YP_004536931.1 827003 R 717773 CDS YP_004536932.1 334143776 10719500 complement(827789..828295) 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: tcx:Tcr_0920 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 828295 10719500 Thicy_0681 Thioalkalimicrobium cyclicum ALM1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004536932.1 827789 R 717773 CDS YP_004536933.1 334143777 10719501 complement(828374..828946) 1 NC_015581.1 KEGG: tcx:Tcr_0921 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase 828946 10719501 Thicy_0682 Thioalkalimicrobium cyclicum ALM1 peptidyl-prolyl isomerase YP_004536933.1 828374 R 717773 CDS YP_004536934.1 334143778 10719502 829099..830766 1 NC_015581.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: tcx:Tcr_0922 glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 830766 10719502 Thicy_0683 Thioalkalimicrobium cyclicum ALM1 glutaminyl-tRNA synthetase YP_004536934.1 829099 D 717773 CDS YP_004536935.1 334143779 10719503 830791..832167 1 NC_015581.1 TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: tcx:Tcr_0923 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase 832167 10719503 Thicy_0684 Thioalkalimicrobium cyclicum ALM1 cysteinyl-tRNA synthetase YP_004536935.1 830791 D 717773 CDS YP_004536936.1 334143780 10719504 complement(832443..834437) 1 NC_015581.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: tcx:Tcr_0924 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 834437 10719504 Thicy_0685 Thioalkalimicrobium cyclicum ALM1 lytic transglycosylase catalytic subunit YP_004536936.1 832443 R 717773 CDS YP_004536937.1 334143781 10719505 complement(834505..836310) 1 NC_015581.1 KEGG: tcx:Tcr_0925 lytic transglycosylase, catalytic; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase-like, catalytic; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein 836310 10719505 Thicy_0686 Thioalkalimicrobium cyclicum ALM1 peptidoglycan-binding lysin domain-containing protein YP_004536937.1 834505 R 717773 CDS YP_004536938.1 334143782 10719506 complement(836395..837189) 1 NC_015581.1 TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; KEGG: pha:PSHAa1966 hydroxyacylglutathione hydrolase; Hydroxyacylglutathione hydrolase 837189 10719506 Thicy_0687 Thioalkalimicrobium cyclicum ALM1 Hydroxyacylglutathione hydrolase YP_004536938.1 836395 R 717773 CDS YP_004536939.1 334143783 10719507 837307..838119 1 NC_015581.1 KEGG: tcx:Tcr_0927 hypothetical protein; hypothetical protein 838119 10719507 Thicy_0688 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536939.1 837307 D 717773 CDS YP_004536940.1 334143784 10719508 838130..838573 1 NC_015581.1 HAMAP: Ribonuclease H; KEGG: hha:Hhal_1585 ribonuclease H; PFAM: Ribonuclease H; Ribonuclease H 838573 10719508 Thicy_0689 Thioalkalimicrobium cyclicum ALM1 Ribonuclease H YP_004536940.1 838130 D 717773 CDS YP_004536941.1 334143785 10719509 838580..839497 1 NC_015581.1 PFAM: Peptidase M23; KEGG: xca:xccb100_1920 metalloendopeptidase; peptidase M23 839497 10719509 Thicy_0690 Thioalkalimicrobium cyclicum ALM1 peptidase M23 YP_004536941.1 838580 D 717773 CDS YP_004536942.1 334143786 10719510 complement(839487..840215) 1 NC_015581.1 TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: tcx:Tcr_1371 competence lipoprotein ComL; outer membrane assembly lipoprotein YfiO 840215 10719510 Thicy_0691 Thioalkalimicrobium cyclicum ALM1 outer membrane assembly lipoprotein YfiO YP_004536942.1 839487 R 717773 CDS YP_004536943.1 334143787 10719511 840287..841360 1 NC_015581.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: tcx:Tcr_1370 pseudouridine synthase, RluD; SMART: RNA-binding S4; pseudouridine synthase Rlu family protein 841360 10719511 Thicy_0692 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rlu family protein YP_004536943.1 840287 D 717773 CDS YP_004536944.1 334143788 10719512 841387..842208 1 NC_015581.1 KEGG: tgr:Tgr7_0816 protein of unknown function DUF152; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase 842208 10719512 Thicy_0693 Thioalkalimicrobium cyclicum ALM1 multi-copper polyphenol oxidoreductase, laccase YP_004536944.1 841387 D 717773 CDS YP_004536945.1 334143789 10719513 complement(842217..843068) 1 NC_015581.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: asa:ASA_0415 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 843068 10719513 Thicy_0694 Thioalkalimicrobium cyclicum ALM1 nicotinate-nucleotide pyrophosphorylase YP_004536945.1 842217 R 717773 CDS YP_004536946.1 334143790 10719514 843128..843733 1 NC_015581.1 KEGG: psp:PSPPH_0843 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 843733 10719514 Thicy_0695 Thioalkalimicrobium cyclicum ALM1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_004536946.1 843128 D 717773 CDS YP_004536947.1 334143791 10719515 843915..844430 1 NC_015581.1 KEGG: tcx:Tcr_1365 flavodoxin, long chain; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase; flavodoxin 844430 10719515 Thicy_0696 Thioalkalimicrobium cyclicum ALM1 flavodoxin YP_004536947.1 843915 D 717773 CDS YP_004536948.1 334143792 10719516 complement(844440..845099) 1 NC_015581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: maq:Maqu_0813 HAD family hydrolase; HAD-superfamily hydrolase 845099 10719516 Thicy_0697 Thioalkalimicrobium cyclicum ALM1 HAD-superfamily hydrolase YP_004536948.1 844440 R 717773 CDS YP_004536949.1 334143793 10719517 845242..845730 1 NC_015581.1 KEGG: tcx:Tcr_1000 NUDIX hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; RNA pyrophosphohydrolase 845730 10719517 Thicy_0698 Thioalkalimicrobium cyclicum ALM1 RNA pyrophosphohydrolase YP_004536949.1 845242 D 717773 CDS YP_004536950.1 334143794 10719518 845947..848610 1 NC_015581.1 KEGG: tcx:Tcr_1001 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 848610 10719518 Thicy_0699 Thioalkalimicrobium cyclicum ALM1 2-oxo-acid dehydrogenase E1 subunit, homodimeric type YP_004536950.1 845947 D 717773 CDS YP_004536951.1 334143795 10719519 848638..849984 1 NC_015581.1 KEGG: tcx:Tcr_1002 dehydrogenase catalytic domain-containing protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 849984 10719519 Thicy_0700 Thioalkalimicrobium cyclicum ALM1 dihydrolipoyllysine-residue acetyltransferase YP_004536951.1 848638 D 717773 CDS YP_004536952.1 334143796 10719520 850000..851769 1 NC_015581.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: tcx:Tcr_1003 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 851769 10719520 Thicy_0701 Thioalkalimicrobium cyclicum ALM1 dihydrolipoamide dehydrogenase YP_004536952.1 850000 D 717773 CDS YP_004536953.1 334143797 10719521 851837..852514 1 NC_015581.1 KEGG: sku:Sulku_1768 pseudouridine synthase rlu family protein, tigr01621; TIGRFAM: Pseudouridine synthase, RluA-like; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase Rlu family protein 852514 10719521 Thicy_0702 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rlu family protein YP_004536953.1 851837 D 717773 CDS YP_004536954.1 334143798 10719522 852514..852969 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0153; KEGG: tcx:Tcr_1327 hypothetical protein; hypothetical protein 852969 10719522 Thicy_0703 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536954.1 852514 D 717773 CDS YP_004536955.1 334143799 10719523 complement(852959..853249) 1 NC_015581.1 KEGG: tcx:Tcr_1266 hypothetical protein; hypothetical protein 853249 10719523 Thicy_0704 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536955.1 852959 R 717773 CDS YP_004536956.1 334143800 10719524 853428..855164 1 NC_015581.1 KEGG: tcx:Tcr_1265 hypothetical protein; TIGRFAM: YcaO-like; PFAM: YcaO-like; hypothetical protein 855164 10719524 Thicy_0705 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536956.1 853428 D 717773 CDS YP_004536957.1 334143801 10719525 complement(855223..855972) 1 NC_015581.1 PFAM: Protein of unknown function DUF481; KEGG: tcx:Tcr_1585 hypothetical protein; hypothetical protein 855972 10719525 Thicy_0706 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536957.1 855223 R 717773 CDS YP_004536958.1 334143802 10719526 856092..857048 1 NC_015581.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: tcx:Tcr_1264 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 857048 10719526 Thicy_0707 Thioalkalimicrobium cyclicum ALM1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_004536958.1 856092 D 717773 CDS YP_004536959.1 334143803 10719527 857029..858291 1 NC_015581.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: cja:CJA_1016 MesJ protein; PFAM: PP-loop; tRNA(Ile)-lysidine synthase 858291 10719527 Thicy_0708 Thioalkalimicrobium cyclicum ALM1 tRNA(Ile)-lysidine synthase YP_004536959.1 857029 D 717773 CDS YP_004536960.1 334143804 10719528 858416..860047 1 NC_015581.1 PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: tcx:Tcr_1262 CTP synthetase; CTP synthase 860047 10719528 Thicy_0709 Thioalkalimicrobium cyclicum ALM1 CTP synthase YP_004536960.1 858416 D 717773 CDS YP_004536961.1 334143805 10719529 860050..860889 1 NC_015581.1 PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: tcx:Tcr_1261 2-dehydro-3-deoxyphosphooctonate aldolase; 2-dehydro-3-deoxyphosphooctonate aldolase 860889 10719529 Thicy_0710 Thioalkalimicrobium cyclicum ALM1 2-dehydro-3-deoxyphosphooctonate aldolase YP_004536961.1 860050 D 717773 CDS YP_004536962.1 334143806 10719530 860949..862235 1 NC_015581.1 PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: tcx:Tcr_1260 enolase; enolase 862235 10719530 Thicy_0711 Thioalkalimicrobium cyclicum ALM1 enolase YP_004536962.1 860949 D 717773 CDS YP_004536963.1 334143807 10719531 862248..862616 1 NC_015581.1 PFAM: Septum formation initiator; KEGG: tcx:Tcr_1259 septum formation initiator; septum formation initiator 862616 10719531 Thicy_0712 Thioalkalimicrobium cyclicum ALM1 septum formation initiator YP_004536963.1 862248 D 717773 CDS YP_004536964.1 334143808 10719532 complement(862613..863182) 1 NC_015581.1 KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 863182 10719532 Thicy_0713 Thioalkalimicrobium cyclicum ALM1 Smr protein/MutS2 YP_004536964.1 862613 R 717773 CDS YP_004536965.1 334143809 10719533 863239..863985 1 NC_015581.1 PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: tcx:Tcr_1257 stationary-phase survival protein SurE; multifunctional protein surE 863985 10719533 Thicy_0714 Thioalkalimicrobium cyclicum ALM1 multifunctional protein surE YP_004536965.1 863239 D 717773 CDS YP_004536966.1 334143810 10719534 863995..864708 1 NC_015581.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: tcx:Tcr_1256 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate O-methyltransferase 864708 10719534 Thicy_0715 Thioalkalimicrobium cyclicum ALM1 protein-L-isoaspartate O-methyltransferase YP_004536966.1 863995 D 717773 CDS YP_004536967.1 334143811 10719535 864705..865283 1 NC_015581.1 PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein; hypothetical protein 865283 10719535 Thicy_0716 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536967.1 864705 D 717773 CDS YP_004536968.1 334143812 10719536 complement(865306..865677) 1 NC_015581.1 PFAM: Protein of unknown function DUF498; KEGG: tcx:Tcr_1253 hypothetical protein; hypothetical protein 865677 10719536 Thicy_0717 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536968.1 865306 R 717773 CDS YP_004536969.1 334143813 10719537 865818..867014 1 NC_015581.1 KEGG: tcx:Tcr_1252 aminotransferase; PFAM: Aminotransferase, class I/II; LL-diaminopimelate aminotransferase 867014 10719537 Thicy_0718 Thioalkalimicrobium cyclicum ALM1 LL-diaminopimelate aminotransferase YP_004536969.1 865818 D 717773 CDS YP_004536970.1 334143814 10719538 867016..868332 1 NC_015581.1 KEGG: tcx:Tcr_1251 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; Homoserine dehydrogenase 868332 10719538 Thicy_0719 Thioalkalimicrobium cyclicum ALM1 Homoserine dehydrogenase YP_004536970.1 867016 D 717773 CDS YP_004536971.1 334143815 10719539 868336..869358 1 NC_015581.1 PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: tcx:Tcr_1250 hypothetical protein; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 869358 10719539 Thicy_0720 Thioalkalimicrobium cyclicum ALM1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004536971.1 868336 D 717773 CDS YP_004536972.1 334143816 10719540 869369..870847 1 NC_015581.1 KEGG: tcx:Tcr_1249 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 870847 10719540 Thicy_0721 Thioalkalimicrobium cyclicum ALM1 threonine synthase YP_004536972.1 869369 D 717773 CDS YP_004536973.1 334143817 10719541 complement(870875..872680) 1 NC_015581.1 PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: tcx:Tcr_1248 phosphoesterase, RecJ-like; phosphoesterase RecJ domain-containing protein 872680 10719541 Thicy_0722 Thioalkalimicrobium cyclicum ALM1 phosphoesterase RecJ domain-containing protein YP_004536973.1 870875 R 717773 CDS YP_004536974.1 334143818 10719542 complement(872729..874351) 1 NC_015581.1 KEGG: tcx:Tcr_1244 hypothetical protein; hypothetical protein 874351 10719542 Thicy_0723 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536974.1 872729 R 717773 CDS YP_004536975.1 334143819 10719543 complement(874348..875247) 1 NC_015581.1 KEGG: ilo:IL2251 glutamyl-tRNA synthetase related protein; manually curated; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein 875247 10719543 Thicy_0724 Thioalkalimicrobium cyclicum ALM1 glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein YP_004536975.1 874348 R 717773 CDS YP_004536976.1 334143820 10719544 complement(875240..875668) 1 NC_015581.1 TIGRFAM: RNA polymerase-binding, DksA; KEGG: tcx:Tcr_1243 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 875668 10719544 Thicy_0725 Thioalkalimicrobium cyclicum ALM1 TraR/DksA family transcriptional regulator YP_004536976.1 875240 R 717773 CDS YP_004536977.1 334143821 10719545 875897..876676 1 NC_015581.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: tcx:Tcr_1242 HAD family hydrolase; haloacid dehalogenase domain-containing protein hydrolase 876676 10719545 Thicy_0726 Thioalkalimicrobium cyclicum ALM1 haloacid dehalogenase domain-containing protein hydrolase YP_004536977.1 875897 D 717773 CDS YP_004536978.1 334143822 10719546 876713..878605 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: tcx:Tcr_1096 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 878605 10719546 Thicy_0727 Thioalkalimicrobium cyclicum ALM1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004536978.1 876713 D 717773 CDS YP_004536979.1 334143823 10719547 complement(878699..879049) 1 NC_015581.1 PFAM: HopJ type III effector protein; KEGG: tcx:Tcr_2012 hypothetical protein; HopJ type III effector protein 879049 10719547 Thicy_0728 Thioalkalimicrobium cyclicum ALM1 HopJ type III effector protein YP_004536979.1 878699 R 717773 CDS YP_004536980.1 334143824 10719548 complement(879062..880360) 1 NC_015581.1 PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: tcx:Tcr_1241 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 880360 10719548 Thicy_0729 Thioalkalimicrobium cyclicum ALM1 carbohydrate kinase FGGY YP_004536980.1 879062 R 717773 CDS YP_004536981.1 334143825 10719549 880449..883961 1 NC_015581.1 KEGG: avn:Avin_30320 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; chromosome segregation protein SMC 883961 10719549 Thicy_0730 Thioalkalimicrobium cyclicum ALM1 chromosome segregation protein SMC YP_004536981.1 880449 D 717773 CDS YP_004536982.1 334143826 10719550 883958..884935 1 NC_015581.1 SMART: ZipA, C-terminal FtsZ-binding region; KEGG: tcx:Tcr_1240 cell division protein-like; ZipA FtsZ-binding region protein 884935 10719550 Thicy_0731 Thioalkalimicrobium cyclicum ALM1 ZipA FtsZ-binding region protein YP_004536982.1 883958 D 717773 CDS YP_004536983.1 334143827 10719551 884952..887075 1 NC_015581.1 SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: tcx:Tcr_1239 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; DNA ligase 887075 10719551 Thicy_0732 Thioalkalimicrobium cyclicum ALM1 DNA ligase YP_004536983.1 884952 D 717773 CDS YP_004536984.1 334143828 10719552 887059..887604 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0307; KEGG: tcx:Tcr_1238 hypothetical protein; hypothetical protein 887604 10719552 Thicy_0733 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536984.1 887059 D 717773 CDS YP_004536985.1 334143829 10719553 887605..887715 1 NC_015581.1 hypothetical protein 887715 10719553 Thicy_0734 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536985.1 887605 D 717773 CDS YP_004536986.1 334143830 10719554 complement(887712..888623) 1 NC_015581.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: tcx:Tcr_1236 hypothetical protein; hypothetical protein 888623 10719554 Thicy_0735 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536986.1 887712 R 717773 CDS YP_004536987.1 334143831 10719555 complement(888647..889153) 1 NC_015581.1 PFAM: Asparaginase/glutaminase; KEGG: tcx:Tcr_1235 asparaginase; asparaginase/glutaminase 889153 10719555 Thicy_0736 Thioalkalimicrobium cyclicum ALM1 asparaginase/glutaminase YP_004536987.1 888647 R 717773 CDS YP_004536988.1 334143832 10719556 complement(889202..889663) 1 NC_015581.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: tcx:Tcr_1234 putative prophage repressor; peptidase S24/S26A/S26B, conserved region 889663 10719556 Thicy_0737 Thioalkalimicrobium cyclicum ALM1 peptidase S24/S26A/S26B, conserved region YP_004536988.1 889202 R 717773 CDS YP_004536989.1 334143833 10719557 complement(889660..889950) 1 NC_015581.1 PFAM: YCII-related; KEGG: hel:HELO_3713 K09780 hypothetical protein; hypothetical protein 889950 10719557 Thicy_0738 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536989.1 889660 R 717773 CDS YP_004536990.1 334143834 10719558 complement(889980..890567) 1 NC_015581.1 TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: tcx:Tcr_1232 intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein 890567 10719558 Thicy_0739 Thioalkalimicrobium cyclicum ALM1 intracellular septation protein YP_004536990.1 889980 R 717773 CDS YP_004536991.1 334143835 10719559 890665..891513 1 NC_015581.1 KEGG: tcx:Tcr_1231 PHP-like; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 891513 10719559 Thicy_0740 Thioalkalimicrobium cyclicum ALM1 PHP domain-containing protein YP_004536991.1 890665 D 717773 CDS YP_004536992.1 334143836 10719560 891535..892158 1 NC_015581.1 KEGG: tcx:Tcr_1230 SUA5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 892158 10719560 Thicy_0741 Thioalkalimicrobium cyclicum ALM1 Sua5/YciO/YrdC/YwlC family protein YP_004536992.1 891535 D 717773 CDS YP_004536993.1 334143837 10719561 892155..892817 1 NC_015581.1 PFAM: Peptidase M50; KEGG: tcx:Tcr_1229 peptidase M50; peptidase M50 892817 10719561 Thicy_0742 Thioalkalimicrobium cyclicum ALM1 peptidase M50 YP_004536993.1 892155 D 717773 CDS YP_004536994.1 334143838 10719562 892821..893666 1 NC_015581.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: xfa:XF2451 hypothetical protein; chromosome segregation and condensation protein ScpA 893666 10719562 Thicy_0743 Thioalkalimicrobium cyclicum ALM1 chromosome segregation and condensation protein ScpA YP_004536994.1 892821 D 717773 CDS YP_004536995.1 334143839 10719563 893663..894265 1 NC_015581.1 KEGG: rso:RSc1285 hypothetical protein; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 894265 10719563 Thicy_0744 Thioalkalimicrobium cyclicum ALM1 chromosome segregation and condensation protein ScpB YP_004536995.1 893663 D 717773 CDS YP_004536996.1 334143840 10719564 894302..895159 1 NC_015581.1 TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: tcx:Tcr_1228 pseudouridine synthase, Rsu; SMART: RNA-binding S4; pseudouridine synthase Rsu 895159 10719564 Thicy_0745 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rsu YP_004536996.1 894302 D 717773 CDS YP_004536997.1 334143841 10719565 895166..896005 1 NC_015581.1 KEGG: tcx:Tcr_1308 hypothetical protein; hypothetical protein 896005 10719565 Thicy_0746 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004536997.1 895166 D 717773 CDS YP_004536998.1 334143842 10719566 895992..896918 1 NC_015581.1 PFAM: UbiA prenyltransferase; KEGG: putative prenyltransferase; UbiA prenyltransferase 896918 10719566 Thicy_0747 Thioalkalimicrobium cyclicum ALM1 UbiA prenyltransferase YP_004536998.1 895992 D 717773 CDS YP_004536999.1 334143843 10719567 896928..897824 1 NC_015581.1 TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; KEGG: tcx:Tcr_1306 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase B 897824 10719567 Thicy_0748 Thioalkalimicrobium cyclicum ALM1 cysteine synthase B YP_004536999.1 896928 D 717773 CDS YP_004537000.1 334143844 10719568 897849..898667 1 NC_015581.1 PFAM: 3'-5' exonuclease, PolB-like; KEGG: abo:ABO_1625 hypothetical protein; 3'-5' exonuclease 898667 10719568 Thicy_0749 Thioalkalimicrobium cyclicum ALM1 3'-5' exonuclease YP_004537000.1 897849 D 717773 CDS YP_004537001.1 334143845 10719569 898652..899134 1 NC_015581.1 PFAM: Adenylate cyclase; KEGG: tcx:Tcr_1305 adenylate cyclase; adenylate cyclase 899134 10719569 Thicy_0750 Thioalkalimicrobium cyclicum ALM1 adenylate cyclase YP_004537001.1 898652 D 717773 CDS YP_004537002.1 334143846 10719570 899136..900470 1 NC_015581.1 KEGG: tcx:Tcr_1304 type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; TolC family type I secretion outer membrane protein 900470 10719570 Thicy_0751 Thioalkalimicrobium cyclicum ALM1 TolC family type I secretion outer membrane protein YP_004537002.1 899136 D 717773 CDS YP_004537003.1 334143847 10719571 900482..902014 1 NC_015581.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: tcx:Tcr_1303 extracellular solute-binding protein; ABC transporter substrate-binding protein 902014 10719571 Thicy_0752 Thioalkalimicrobium cyclicum ALM1 ABC transporter substrate-binding protein YP_004537003.1 900482 D 717773 CDS YP_004537004.1 334143848 10719576 902572..904020 1 NC_015581.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: tcx:Tcr_1215 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 904020 10719576 Thicy_0753 Thioalkalimicrobium cyclicum ALM1 6-phosphogluconate dehydrogenase YP_004537004.1 902572 D 717773 CDS YP_004537005.1 334143849 10719577 904023..905522 1 NC_015581.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: tcx:Tcr_1214 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 905522 10719577 Thicy_0754 Thioalkalimicrobium cyclicum ALM1 glucose-6-phosphate 1-dehydrogenase YP_004537005.1 904023 D 717773 CDS YP_004537006.1 334143850 10719578 905506..906210 1 NC_015581.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: tcx:Tcr_1213 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 906210 10719578 Thicy_0755 Thioalkalimicrobium cyclicum ALM1 6-phosphogluconolactonase YP_004537006.1 905506 D 717773 CDS YP_004537007.1 334143851 10719579 complement(906177..906719) 1 NC_015581.1 PFAM: Protein of unknown function DUF2062; KEGG: tcx:Tcr_0557 hypothetical protein; hypothetical protein 906719 10719579 Thicy_0756 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537007.1 906177 R 717773 CDS YP_004537008.1 334143852 10719580 complement(906706..908889) 1 NC_015581.1 TIGRFAM: RelA/SpoT protein; KEGG: tcx:Tcr_1212 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA 908889 10719580 Thicy_0757 Thioalkalimicrobium cyclicum ALM1 (p)ppGpp synthetase I SpoT/RelA YP_004537008.1 906706 R 717773 CDS YP_004537009.1 334143853 10719581 complement(908932..909216) 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: psm:PSM_A0521 peptidyl-prolyl cis-trans isomerase C (rotamase C); PpiC-type peptidyl-prolyl cis-trans isomerase 909216 10719581 Thicy_0758 Thioalkalimicrobium cyclicum ALM1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004537009.1 908932 R 717773 CDS YP_004537010.1 334143854 10719582 complement(909254..910252) 1 NC_015581.1 PFAM: Peptidase S49; KEGG: tcx:Tcr_1144 peptidase S49; peptidase S49 910252 10719582 Thicy_0759 Thioalkalimicrobium cyclicum ALM1 peptidase S49 YP_004537010.1 909254 R 717773 CDS YP_004537011.1 334143855 10719583 910322..912169 1 NC_015581.1 SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: tcx:Tcr_1145 excinuclease ABC, C subunit; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C 912169 10719583 Thicy_0760 Thioalkalimicrobium cyclicum ALM1 UvrABC system protein C YP_004537011.1 910322 D 717773 CDS YP_004537012.1 334143856 10719584 912166..912738 1 NC_015581.1 PFAM: Protein of unknown function DUF1415; KEGG: sse:Ssed_1492 hypothetical protein; hypothetical protein 912738 10719584 Thicy_0761 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537012.1 912166 D 717773 CDS YP_004537013.1 334143857 10719585 912726..913655 1 NC_015581.1 PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; KEGG: dfe:Dfer_3013 MOSC domain containing protein; MOSC domain-containing protein beta barrel domain-containing protein 913655 10719585 Thicy_0762 Thioalkalimicrobium cyclicum ALM1 MOSC domain-containing protein beta barrel domain-containing protein YP_004537013.1 912726 D 717773 CDS YP_004537014.1 334143858 10719586 913740..914294 1 NC_015581.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: tcx:Tcr_1146 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 914294 10719586 Thicy_0763 Thioalkalimicrobium cyclicum ALM1 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004537014.1 913740 D 717773 CDS YP_004537015.1 334143859 10719590 914812..915921 1 NC_015581.1 PFAM: Integrase, catalytic core, phage; KEGG: pin:Ping_0399 phage integrase family protein; integrase family protein 915921 10719590 Thicy_0764 Thioalkalimicrobium cyclicum ALM1 integrase family protein YP_004537015.1 914812 D 717773 CDS YP_004537016.1 334143860 10719591 915921..916436 1 NC_015581.1 hypothetical protein 916436 10719591 Thicy_0765 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537016.1 915921 D 717773 CDS YP_004537017.1 334143861 10719592 916512..916715 1 NC_015581.1 hypothetical protein 916715 10719592 Thicy_0766 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537017.1 916512 D 717773 CDS YP_004537018.1 334143862 10719593 916731..916904 1 NC_015581.1 hypothetical protein 916904 10719593 Thicy_0767 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537018.1 916731 D 717773 CDS YP_004537019.1 334143863 10719594 916894..917079 1 NC_015581.1 hypothetical protein 917079 10719594 Thicy_0768 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537019.1 916894 D 717773 CDS YP_004537020.1 334143864 10719595 917076..917381 1 NC_015581.1 hypothetical protein 917381 10719595 Thicy_0769 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537020.1 917076 D 717773 CDS YP_004537021.1 334143865 10719596 917384..918229 1 NC_015581.1 hypothetical protein 918229 10719596 Thicy_0770 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537021.1 917384 D 717773 CDS YP_004537022.1 334143866 10719597 918265..918468 1 NC_015581.1 hypothetical protein 918468 10719597 Thicy_0771 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537022.1 918265 D 717773 CDS YP_004537023.1 334143867 10719598 918486..918863 1 NC_015581.1 hypothetical protein 918863 10719598 Thicy_0772 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537023.1 918486 D 717773 CDS YP_004537024.1 334143868 10719599 919430..919792 1 NC_015581.1 KEGG: aeh:Mlg_1064 hypothetical protein; hypothetical protein 919792 10719599 Thicy_0773 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537024.1 919430 D 717773 CDS YP_004537025.1 334143869 10719600 919794..921191 1 NC_015581.1 KEGG: aeh:Mlg_1066 hypothetical protein; hypothetical protein 921191 10719600 Thicy_0774 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537025.1 919794 D 717773 CDS YP_004537026.1 334143870 10719601 921214..921720 1 NC_015581.1 KEGG: pic:PICST_59451 Chromosome segregation and condensation; hypothetical protein 921720 10719601 Thicy_0775 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537026.1 921214 D 717773 CDS YP_004537027.1 334143871 10719602 922070..922474 1 NC_015581.1 KEGG: aha:AHA_2459 SecC motif-containing protein; SecC motif-containing protein 922474 10719602 Thicy_0776 Thioalkalimicrobium cyclicum ALM1 SecC motif-containing protein YP_004537027.1 922070 D 717773 CDS YP_004537028.1 334143872 10719603 922572..923801 1 NC_015581.1 PFAM: Nitrate/nitrite sensing protein NIT; ANTAR; KEGG: tkm:TK90_0664 ANTAR domain protein with unknown sensor; nitrate and nitrite sensing domain-containing protein 923801 10719603 Thicy_0777 Thioalkalimicrobium cyclicum ALM1 nitrate and nitrite sensing domain-containing protein YP_004537028.1 922572 D 717773 CDS YP_004537029.1 334143873 10719604 924114..925508 1 NC_015581.1 KEGG: amc:MADE_03654 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 925508 10719604 Thicy_0778 Thioalkalimicrobium cyclicum ALM1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_004537029.1 924114 D 717773 CDS YP_004537030.1 334143874 10719605 925556..926548 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcx:Tcr_1154 binding-protein dependent transport system inner membrane protein; ABC transporter permease 926548 10719605 Thicy_0779 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537030.1 925556 D 717773 CDS YP_004537031.1 334143875 10719606 926564..927352 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: hna:Hneap_1117 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter-like; nitrate ABC transporter ATPases C and D 927352 10719606 Thicy_0780 Thioalkalimicrobium cyclicum ALM1 nitrate ABC transporter ATPases C and D YP_004537031.1 926564 D 717773 CDS YP_004537032.1 334143876 10719607 927610..928842 1 NC_015581.1 KEGG: tcx:Tcr_1156 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite reductase (NAD(P)H) 928842 10719607 Thicy_0781 Thioalkalimicrobium cyclicum ALM1 nitrite reductase (NAD(P)H) YP_004537032.1 927610 D 717773 CDS YP_004537033.1 334143877 10719608 928839..931370 1 NC_015581.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: tcx:Tcr_1157 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region; nitrite reductase (NAD(P)H) large subunit 931370 10719608 Thicy_0782 Thioalkalimicrobium cyclicum ALM1 nitrite reductase (NAD(P)H) large subunit YP_004537033.1 928839 D 717773 CDS YP_004537034.1 334143878 10719609 931379..931714 1 NC_015581.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG: tcx:Tcr_1158 putative nitrate reductase (electron transfer subunit) and putative nitrite reductase (small subunit); nitrite reductase (NAD(P)H) small subunit 931714 10719609 Thicy_0783 Thioalkalimicrobium cyclicum ALM1 nitrite reductase (NAD(P)H) small subunit YP_004537034.1 931379 D 717773 CDS YP_004537035.1 334143879 10719610 931696..934389 1 NC_015581.1 KEGG: tcx:Tcr_1159 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; nitrate reductase 934389 10719610 Thicy_0784 Thioalkalimicrobium cyclicum ALM1 nitrate reductase YP_004537035.1 931696 D 717773 CDS YP_004537036.1 334143880 10719611 934391..935815 1 NC_015581.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; KEGG: psa:PST_2288 siroheme synthase; PFAM: Tetrapyrrole methylase; uroporphyrin-III C-methyltransferase 935815 10719611 Thicy_0785 Thioalkalimicrobium cyclicum ALM1 uroporphyrin-III C-methyltransferase YP_004537036.1 934391 D 717773 CDS YP_004537037.1 334143881 10719612 935808..936785 1 NC_015581.1 PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: tcx:Tcr_1161 hypothetical protein; glycosyl transferase, family 3 936785 10719612 Thicy_0786 Thioalkalimicrobium cyclicum ALM1 glycosyl transferase, family 3 YP_004537037.1 935808 D 717773 CDS YP_004537038.1 334143882 10719613 936778..938079 1 NC_015581.1 PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: tcx:Tcr_1162 molybdopterin binding domain-containing protein; MoeA domain-containing protein domain I and II 938079 10719613 Thicy_0787 Thioalkalimicrobium cyclicum ALM1 MoeA domain-containing protein domain I and II YP_004537038.1 936778 D 717773 CDS YP_004537039.1 334143883 10719614 938076..938717 1 NC_015581.1 HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: aeh:Mlg_1304 molybdenum cofactor guanylyltransferase; molybdopterin-guanine dinucleotide biosynthesis protein A 938717 10719614 Thicy_0788 Thioalkalimicrobium cyclicum ALM1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_004537039.1 938076 D 717773 CDS YP_004537040.1 334143884 10719615 complement(938686..939198) 1 NC_015581.1 PFAM: Flavodoxin/nitric oxide synthase; KEGG: avn:Avin_12440 sulfite reductase (NADPH) flavoprotein alpha-component/iron-regulated membrane protein; flavodoxin/nitric oxide synthase 939198 10719615 Thicy_0789 Thioalkalimicrobium cyclicum ALM1 flavodoxin/nitric oxide synthase YP_004537040.1 938686 R 717773 CDS YP_004537041.1 334143885 10719616 complement(939198..940568) 1 NC_015581.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: mmw:Mmwyl1_0897 beta-lactamase domain-containing protein; RNA-metabolising metallo-beta-lactamase 940568 10719616 Thicy_0790 Thioalkalimicrobium cyclicum ALM1 RNA-metabolising metallo-beta-lactamase YP_004537041.1 939198 R 717773 CDS YP_004537042.1 334143886 10719617 complement(940568..940858) 1 NC_015581.1 PFAM: BFD-like [2Fe-2S]-binding region; KEGG: tcx:Tcr_0857 BFD-like (2Fe-2S)-binding region; BFD (2Fe-2S)-binding domain-containing protein 940858 10719617 Thicy_0791 Thioalkalimicrobium cyclicum ALM1 BFD (2Fe-2S)-binding domain-containing protein YP_004537042.1 940568 R 717773 CDS YP_004537043.1 334143887 10719618 940948..942066 1 NC_015581.1 KEGG: tcx:Tcr_1210 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase; yjbN family TIM-barrel protein 942066 10719618 Thicy_0792 Thioalkalimicrobium cyclicum ALM1 yjbN family TIM-barrel protein YP_004537043.1 940948 D 717773 CDS YP_004537044.1 334143888 10719619 942053..943636 1 NC_015581.1 KEGG: tcx:Tcr_1209 exodeoxyribonuclease VII large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; exodeoxyribonuclease VII large subunit 943636 10719619 Thicy_0793 Thioalkalimicrobium cyclicum ALM1 exodeoxyribonuclease VII large subunit YP_004537044.1 942053 D 717773 CDS YP_004537045.1 334143889 10719620 943650..943874 1 NC_015581.1 PFAM: Exonuclease VII, small subunit; KEGG: tcx:Tcr_1208 hypothetical protein; Exonuclease VII small subunit 943874 10719620 Thicy_0794 Thioalkalimicrobium cyclicum ALM1 Exonuclease VII small subunit YP_004537045.1 943650 D 717773 CDS YP_004537046.1 334143890 10719621 complement(943991..944440) 1 NC_015581.1 KEGG: tcx:Tcr_1206 hypothetical protein; hypothetical protein 944440 10719621 Thicy_0795 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537046.1 943991 R 717773 CDS YP_004537047.1 334143891 10719622 944594..946129 1 NC_015581.1 KEGG: tcx:Tcr_1205 sigma-54 (RpoN); TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase sigma 54 subunit RpoN 946129 10719622 Thicy_0796 Thioalkalimicrobium cyclicum ALM1 RNA polymerase sigma 54 subunit RpoN YP_004537047.1 944594 D 717773 CDS YP_004537048.1 334143892 10719623 946162..947094 1 NC_015581.1 KEGG: tcx:Tcr_1204 hypothetical protein; hypothetical protein 947094 10719623 Thicy_0797 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537048.1 946162 D 717773 CDS YP_004537049.1 334143893 10719624 947133..947816 1 NC_015581.1 KEGG: tcx:Tcr_1203 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 947816 10719624 Thicy_0798 Thioalkalimicrobium cyclicum ALM1 two component transcriptional regulator, winged helix family YP_004537049.1 947133 D 717773 CDS YP_004537050.1 334143894 10719625 947804..949387 1 NC_015581.1 KEGG: tcx:Tcr_1202 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 949387 10719625 Thicy_0799 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537050.1 947804 D 717773 CDS YP_004537051.1 334143895 10719626 949463..949681 1 NC_015581.1 hypothetical protein 949681 10719626 Thicy_0800 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537051.1 949463 D 717773 CDS YP_004537052.1 334143896 10719627 complement(949678..951030) 1 NC_015581.1 KEGG: tcx:Tcr_1356 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE; MATE efflux family protein 951030 10719627 Thicy_0801 Thioalkalimicrobium cyclicum ALM1 MATE efflux family protein YP_004537052.1 949678 R 717773 CDS YP_004537053.1 334143897 10719628 complement(951033..951431) 1 NC_015581.1 KEGG: tcx:Tcr_1357 hypothetical protein; hypothetical protein 951431 10719628 Thicy_0802 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537053.1 951033 R 717773 CDS YP_004537054.1 334143898 10719629 complement(951435..952028) 1 NC_015581.1 TIGRFAM: Nucleoside diphosphate pyrophosphatase; KEGG: tcx:Tcr_1358 nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain; nucleoside diphosphate pyrophosphatase 952028 10719629 Thicy_0803 Thioalkalimicrobium cyclicum ALM1 nucleoside diphosphate pyrophosphatase YP_004537054.1 951435 R 717773 CDS YP_004537055.1 334143899 10719630 complement(952018..953097) 1 NC_015581.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: tcx:Tcr_1359 alanine racemase; alanine racemase 953097 10719630 Thicy_0804 Thioalkalimicrobium cyclicum ALM1 alanine racemase YP_004537055.1 952018 R 717773 CDS YP_004537056.1 334143900 10719631 complement(953109..954542) 1 NC_015581.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: tcx:Tcr_1360 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase 954542 10719631 Thicy_0805 Thioalkalimicrobium cyclicum ALM1 replicative DNA helicase YP_004537056.1 953109 R 717773 CDS YP_004537057.1 334143901 10719632 complement(954640..955086) 1 NC_015581.1 TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: tcx:Tcr_1361 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 955086 10719632 Thicy_0806 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L9 YP_004537057.1 954640 R 717773 CDS YP_004537058.1 334143902 10719633 complement(955098..955994) 1 NC_015581.1 PFAM: Protein of unknown function DUF2232, membrane; KEGG: tcx:Tcr_1362 hypothetical protein; hypothetical protein 955994 10719633 Thicy_0807 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537058.1 955098 R 717773 CDS YP_004537059.1 334143903 10719634 complement(956009..956236) 1 NC_015581.1 TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: tcx:Tcr_1363 ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 956236 10719634 Thicy_0808 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S18 YP_004537059.1 956009 R 717773 CDS YP_004537060.1 334143904 10719635 complement(956255..956602) 1 NC_015581.1 TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: tcx:Tcr_1364 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 956602 10719635 Thicy_0809 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S6 YP_004537060.1 956255 R 717773 CDS YP_004537061.1 334143905 10719636 complement(956749..957468) 1 NC_015581.1 TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: tcx:Tcr_1201 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; orotidine 5'-phosphate decarboxylase 957468 10719636 Thicy_0810 Thioalkalimicrobium cyclicum ALM1 orotidine 5'-phosphate decarboxylase YP_004537061.1 956749 R 717773 CDS YP_004537062.1 334143906 10719637 complement(957515..957874) 1 NC_015581.1 PFAM: Protein of unknown function DUF1049; KEGG: tcx:Tcr_1200 hypothetical protein; hypothetical protein 957874 10719637 Thicy_0811 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537062.1 957515 R 717773 CDS YP_004537063.1 334143907 10719638 complement(957888..958193) 1 NC_015581.1 TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: tcx:Tcr_1199 integration host factor, beta subunit; SMART: Histone-like bacterial DNA-binding protein; integration host factor subunit beta 958193 10719638 Thicy_0812 Thioalkalimicrobium cyclicum ALM1 integration host factor subunit beta YP_004537063.1 957888 R 717773 CDS YP_004537064.1 334143908 10719639 complement(958293..959951) 1 NC_015581.1 KEGG: tcx:Tcr_1198 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain; 30S ribosomal protein S1 959951 10719639 Thicy_0813 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S1 YP_004537064.1 958293 R 717773 CDS YP_004537065.1 334143909 10719640 complement(960061..960720) 1 NC_015581.1 PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tcx:Tcr_1197 cytidylate kinase; cytidylate kinase 960720 10719640 Thicy_0814 Thioalkalimicrobium cyclicum ALM1 cytidylate kinase YP_004537065.1 960061 R 717773 CDS YP_004537066.1 334143910 10719641 complement(960720..962054) 1 NC_015581.1 PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: tcx:Tcr_1196 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 962054 10719641 Thicy_0815 Thioalkalimicrobium cyclicum ALM1 3-phosphoshikimate 1-carboxyvinyltransferase YP_004537066.1 960720 R 717773 CDS YP_004537067.1 334143911 10719642 complement(962092..962967) 1 NC_015581.1 KEGG: tcx:Tcr_1195 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 962967 10719642 Thicy_0816 Thioalkalimicrobium cyclicum ALM1 prephenate dehydrogenase YP_004537067.1 962092 R 717773 CDS YP_004537068.1 334143912 10719643 complement(962968..964059) 1 NC_015581.1 PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: tcx:Tcr_1194 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 964059 10719643 Thicy_0817 Thioalkalimicrobium cyclicum ALM1 histidinol-phosphate aminotransferase YP_004537068.1 962968 R 717773 CDS YP_004537069.1 334143913 10719644 complement(964078..965172) 1 NC_015581.1 KEGG: tcx:Tcr_1193 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; chorismate mutase 965172 10719644 Thicy_0818 Thioalkalimicrobium cyclicum ALM1 chorismate mutase YP_004537069.1 964078 R 717773 CDS YP_004537070.1 334143914 10719645 complement(965183..966256) 1 NC_015581.1 PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: tcx:Tcr_1192 phosphoserine aminotransferase; phosphoserine aminotransferase 966256 10719645 Thicy_0819 Thioalkalimicrobium cyclicum ALM1 phosphoserine aminotransferase YP_004537070.1 965183 R 717773 CDS YP_004537071.1 334143915 10719646 complement(966259..968895) 1 NC_015581.1 SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: tcx:Tcr_1191 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A 968895 10719646 Thicy_0820 Thioalkalimicrobium cyclicum ALM1 DNA gyrase subunit A YP_004537071.1 966259 R 717773 CDS YP_004537072.1 334143916 10719647 969043..969762 1 NC_015581.1 PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: tcx:Tcr_1190 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 969762 10719647 Thicy_0821 Thioalkalimicrobium cyclicum ALM1 3-demethylubiquinone-9 3-methyltransferase YP_004537072.1 969043 D 717773 CDS YP_004537073.1 334143917 10719648 969772..970440 1 NC_015581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: tcx:Tcr_1189 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 970440 10719648 Thicy_0822 Thioalkalimicrobium cyclicum ALM1 HAD-superfamily hydrolase YP_004537073.1 969772 D 717773 CDS YP_004537074.1 334143918 10719649 970440..971171 1 NC_015581.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_1188 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 971171 10719649 Thicy_0823 Thioalkalimicrobium cyclicum ALM1 short-chain dehydrogenase/reductase SDR YP_004537074.1 970440 D 717773 CDS YP_004537075.1 334143919 10719650 complement(971210..971524) 1 NC_015581.1 KEGG: vfm:VFMJ11_A0651 CcdB; CcdB-like toxin protein 971524 10719650 Thicy_0824 Thioalkalimicrobium cyclicum ALM1 CcdB-like toxin protein YP_004537075.1 971210 R 717773 CDS YP_004537076.1 334143920 10719651 complement(971524..971769) 1 NC_015581.1 PFAM: Post-segregation antitoxin CcdA; KEGG: cja:CJA_3183 CcdB antidote CcdA; Post-segregation antitoxin CcdA 971769 10719651 Thicy_0825 Thioalkalimicrobium cyclicum ALM1 Post-segregation antitoxin CcdA YP_004537076.1 971524 R 717773 CDS YP_004537077.1 334143921 10719652 complement(971844..974165) 1 NC_015581.1 KEGG: bpy:Bphyt_2527 RNA binding S1 domain protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; Tex-like protein 974165 10719652 Thicy_0826 Thioalkalimicrobium cyclicum ALM1 Tex-like protein YP_004537077.1 971844 R 717773 CDS YP_004537078.1 334143922 10719653 complement(974253..975773) 1 NC_015581.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: tcx:Tcr_0726 lysyl-tRNA synthetase; Lysyl-tRNA synthetase 975773 10719653 Thicy_0827 Thioalkalimicrobium cyclicum ALM1 Lysyl-tRNA synthetase YP_004537078.1 974253 R 717773 CDS YP_004537079.1 334143923 10719654 complement(join(975912..976934,976936..977007)) 1 NC_015581.1 hypothetical protein 977007 10719654 Thicy_0828 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537079.1 975912 R 717773 CDS YP_004537080.1 334143924 10719655 977267..977782 1 NC_015581.1 KEGG: tcx:Tcr_0724 hypothetical protein; hypothetical protein 977782 10719655 Thicy_0829 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537080.1 977267 D 717773 CDS YP_004537081.1 334143925 10719656 complement(977810..978355) 1 NC_015581.1 hypothetical protein 978355 10719656 Thicy_0830 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537081.1 977810 R 717773 CDS YP_004537082.1 334143926 10719657 complement(978460..979338) 1 NC_015581.1 PFAM: UspA; KEGG: hch:HCH_02511 universal stress protein UspA-like nucleotide-binding protein; UspA domain-containing protein 979338 10719657 Thicy_0831 Thioalkalimicrobium cyclicum ALM1 UspA domain-containing protein YP_004537082.1 978460 R 717773 CDS YP_004537083.1 334143927 10719658 complement(979338..980831) 1 NC_015581.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: abu:Abu_1286 sulfate permease; sulfate transporter 980831 10719658 Thicy_0832 Thioalkalimicrobium cyclicum ALM1 sulfate transporter YP_004537083.1 979338 R 717773 CDS YP_004537084.1 334143928 10719659 complement(981025..982947) 1 NC_015581.1 PFAM: 5'-Nucleotidase, C-terminal; KEGG: tcx:Tcr_1549 sulfate thiol esterase; 5'-nucleotidase domain-containing protein 982947 10719659 Thicy_0833 Thioalkalimicrobium cyclicum ALM1 5'-nucleotidase domain-containing protein YP_004537084.1 981025 R 717773 CDS YP_004537085.1 334143929 10719660 complement(983104..986976) 1 NC_015581.1 PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: tcx:Tcr_1550 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 986976 10719660 Thicy_0834 Thioalkalimicrobium cyclicum ALM1 phosphoribosylformylglycinamidine synthase YP_004537085.1 983104 R 717773 CDS YP_004537086.1 334143930 10719661 complement(987033..988085) 1 NC_015581.1 KEGG: tcx:Tcr_1551 hypothetical protein; hypothetical protein 988085 10719661 Thicy_0835 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537086.1 987033 R 717773 CDS YP_004537087.1 334143931 10719662 complement(988082..988963) 1 NC_015581.1 PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: tcx:Tcr_1552 dihydrodipicolinate synthase; dihydrodipicolinate synthase 988963 10719662 Thicy_0836 Thioalkalimicrobium cyclicum ALM1 dihydrodipicolinate synthase YP_004537087.1 988082 R 717773 CDS YP_004537088.1 334143932 10719663 989174..989650 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1553 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 989650 10719663 Thicy_0837 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004537088.1 989174 D 717773 CDS YP_004537089.1 334143933 10719664 989666..991081 1 NC_015581.1 KEGG: tcx:Tcr_1554 PhoH-like protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; PhoH family protein 991081 10719664 Thicy_0838 Thioalkalimicrobium cyclicum ALM1 PhoH family protein YP_004537089.1 989666 D 717773 CDS YP_004537090.1 334143934 10719665 complement(991117..991719) 1 NC_015581.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: tcx:Tcr_0858 putative prophage repressor; peptidase S24/S26A/S26B, conserved region 991719 10719665 Thicy_0839 Thioalkalimicrobium cyclicum ALM1 peptidase S24/S26A/S26B, conserved region YP_004537090.1 991117 R 717773 CDS YP_004537091.1 334143935 10719666 complement(991712..993184) 1 NC_015581.1 SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: mei:Msip34_2797 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon 993184 10719666 Thicy_0840 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit epsilon YP_004537091.1 991712 R 717773 CDS YP_004537092.1 334143936 10719667 complement(993185..994528) 1 NC_015581.1 KEGG: tcx:Tcr_0859 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; DNA-directed DNA polymerase 994528 10719667 Thicy_0841 Thioalkalimicrobium cyclicum ALM1 DNA-directed DNA polymerase YP_004537092.1 993185 R 717773 CDS YP_004537093.1 334143937 10719668 994722..995867 1 NC_015581.1 PFAM: Uncharacterised conserved protein UCP015557; KEGG: ppg:PputGB1_1432 hypothetical protein; hypothetical protein 995867 10719668 Thicy_0842 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537093.1 994722 D 717773 CDS YP_004537094.1 334143938 10719669 995907..996467 1 NC_015581.1 TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: hna:Hneap_0565 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like; elongation factor P 996467 10719669 Thicy_0843 Thioalkalimicrobium cyclicum ALM1 elongation factor P YP_004537094.1 995907 D 717773 CDS YP_004537095.1 334143939 10719670 complement(996578..997729) 1 NC_015581.1 PFAM: Protein of unknown function DUF482; KEGG: tcx:Tcr_1140 hypothetical protein; hypothetical protein 997729 10719670 Thicy_0844 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537095.1 996578 R 717773 CDS YP_004537096.1 334143940 10719671 complement(997823..998032) 1 NC_015581.1 KEGG: tcx:Tcr_1006 hypothetical protein; hypothetical protein 998032 10719671 Thicy_0845 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537096.1 997823 R 717773 CDS YP_004537097.1 334143941 10719672 complement(998060..998332) 1 NC_015581.1 PFAM: Plasmid stabilisation system; KEGG: sku:Sulku_0257 plasmid stabilization system; plasmid stabilization system 998332 10719672 Thicy_0846 Thioalkalimicrobium cyclicum ALM1 plasmid stabilization system YP_004537097.1 998060 R 717773 CDS YP_004537098.1 334143942 10719673 complement(998329..998625) 1 NC_015581.1 PFAM: CopG-like DNA-binding; CopG-like DNA-binding domain-containing protein 998625 10719673 Thicy_0847 Thioalkalimicrobium cyclicum ALM1 CopG-like DNA-binding domain-containing protein YP_004537098.1 998329 R 717773 CDS YP_004537099.1 334143943 10719674 complement(998775..998951) 1 NC_015581.1 manually curated; KEGG: scl:sce0138 hypothetical protein; hypothetical protein 998951 10719674 Thicy_0848 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537099.1 998775 R 717773 CDS YP_004537100.1 334143944 10719675 complement(999341..1001644) 1 NC_015581.1 PFAM: DNA methylase N-4/N-6; KEGG: cyt:cce_1765 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein 1001644 10719675 Thicy_0849 Thioalkalimicrobium cyclicum ALM1 DNA methylase N-4/N-6 domain-containing protein YP_004537100.1 999341 R 717773 CDS YP_004537101.1 334143945 10719676 1001733..1001987 1 NC_015581.1 KEGG: ctt:CtCNB1_1890 putative regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1001987 10719676 Thicy_0850 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004537101.1 1001733 D 717773 CDS YP_004537102.1 334143946 10719677 1001980..1003131 1 NC_015581.1 hypothetical protein 1003131 10719677 Thicy_0851 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537102.1 1001980 D 717773 CDS YP_004537103.1 334143947 10719678 complement(1003182..1004792) 1 NC_015581.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tcx:Tcr_1185 ABC transporter related; SMART: ATPase, AAA+ type, core; Nickel-transporting ATPase 1004792 10719678 Thicy_0852 Thioalkalimicrobium cyclicum ALM1 Nickel-transporting ATPase YP_004537103.1 1003182 R 717773 CDS YP_004537104.1 334143948 10719679 complement(1004804..1005409) 1 NC_015581.1 hypothetical protein 1005409 10719679 Thicy_0853 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537104.1 1004804 R 717773 CDS YP_004537105.1 334143949 10719680 complement(1005424..1006833) 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0195 oligopeptide ABC transporter, permease; ABC transporter permease 1006833 10719680 Thicy_0854 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537105.1 1005424 R 717773 CDS YP_004537106.1 334143950 10719681 complement(1006830..1007807) 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0194 oligopeptide ABC transporter, permease; ABC transporter permease 1007807 10719681 Thicy_0855 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537106.1 1006830 R 717773 CDS YP_004537107.1 334143951 10719682 complement(1007804..1010020) 1 NC_015581.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sun:SUN_0193 oligopeptide ABC transporter, substrate-binding protein; ABC transporter substrate-binding protein 1010020 10719682 Thicy_0856 Thioalkalimicrobium cyclicum ALM1 ABC transporter substrate-binding protein YP_004537107.1 1007804 R 717773 CDS YP_004537108.1 334143952 10719683 1010098..1010877 1 NC_015581.1 KEGG: tcx:Tcr_1181 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; enoyl-ACP reductase (NADH) 1010877 10719683 Thicy_0857 Thioalkalimicrobium cyclicum ALM1 enoyl-ACP reductase (NADH) YP_004537108.1 1010098 D 717773 CDS YP_004537109.1 334143953 10719684 complement(1010960..1013869) 1 NC_015581.1 PFAM: Peptidase M16C associated; Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: tcx:Tcr_1130 peptidase M16-like; peptidase M16C associated domain-containing protein 1013869 10719684 Thicy_0858 Thioalkalimicrobium cyclicum ALM1 peptidase M16C associated domain-containing protein YP_004537109.1 1010960 R 717773 CDS YP_004537110.1 334143954 10719685 complement(1014055..1016139) 1 NC_015581.1 PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: tcx:Tcr_1129 polynucleotide phosphorylase/polyadenylase; Polyribonucleotide nucleotidyltransferase 1016139 10719685 Thicy_0859 Thioalkalimicrobium cyclicum ALM1 Polyribonucleotide nucleotidyltransferase YP_004537110.1 1014055 R 717773 CDS YP_004537111.1 334143955 10719686 complement(1016282..1016548) 1 NC_015581.1 KEGG: tcx:Tcr_1128 ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 1016548 10719686 Thicy_0860 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S15 YP_004537111.1 1016282 R 717773 CDS YP_004537112.1 334143956 10719687 complement(1016669..1017160) 1 NC_015581.1 KEGG: tcx:Tcr_1127 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; cyclic nucleotide-binding protein 1017160 10719687 Thicy_0861 Thioalkalimicrobium cyclicum ALM1 cyclic nucleotide-binding protein YP_004537112.1 1016669 R 717773 CDS YP_004537113.1 334143957 10719688 complement(1017138..1018076) 1 NC_015581.1 PFAM: Methyltransferase type 11; KEGG: tcx:Tcr_1126 hypothetical protein; type 11 methyltransferase 1018076 10719688 Thicy_0862 Thioalkalimicrobium cyclicum ALM1 type 11 methyltransferase YP_004537113.1 1017138 R 717773 CDS YP_004537114.1 334143958 10719689 complement(1018039..1018995) 1 NC_015581.1 TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: tcx:Tcr_1125 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; tRNA pseudouridine synthase B 1018995 10719689 Thicy_0863 Thioalkalimicrobium cyclicum ALM1 tRNA pseudouridine synthase B YP_004537114.1 1018039 R 717773 CDS YP_004537115.1 334143959 10719690 complement(1018999..1019355) 1 NC_015581.1 TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: tcx:Tcr_1124 ribosome-binding factor A; PFAM: Ribosome-binding factor A; Ribosome-binding factor A 1019355 10719690 Thicy_0864 Thioalkalimicrobium cyclicum ALM1 Ribosome-binding factor A YP_004537115.1 1018999 R 717773 CDS YP_004537116.1 334143960 10719691 complement(1019355..1021865) 1 NC_015581.1 KEGG: tcx:Tcr_1123 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Initiation factor 2 associated region, bacterial; Translation elongation factor EFTu/EF1A, domain 2; translation initiation factor IF-2 1021865 10719691 Thicy_0865 Thioalkalimicrobium cyclicum ALM1 translation initiation factor IF-2 YP_004537116.1 1019355 R 717773 CDS YP_004537117.1 334143961 10719692 complement(1021885..1023372) 1 NC_015581.1 KEGG: tcx:Tcr_1122 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; NusA antitermination factor 1023372 10719692 Thicy_0866 Thioalkalimicrobium cyclicum ALM1 NusA antitermination factor YP_004537117.1 1021885 R 717773 CDS YP_004537118.1 334143962 10719693 complement(1023385..1023840) 1 NC_015581.1 KEGG: tcx:Tcr_1121 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090; Ribosome maturation factor rimP 1023840 10719693 Thicy_0867 Thioalkalimicrobium cyclicum ALM1 Ribosome maturation factor rimP YP_004537118.1 1023385 R 717773 CDS YP_004537119.1 334143963 10719694 complement(1024041..1024673) 1 NC_015581.1 KEGG: tcx:Tcr_1120 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 1024673 10719694 Thicy_0868 Thioalkalimicrobium cyclicum ALM1 Exonuclease RNase T and DNA polymerase III YP_004537119.1 1024041 R 717773 CDS YP_004537120.1 334143964 10719695 complement(1024673..1026505) 1 NC_015581.1 PFAM: Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; KEGG: tcx:Tcr_1119 signal-transduction protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1026505 10719695 Thicy_0869 Thioalkalimicrobium cyclicum ALM1 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_004537120.1 1024673 R 717773 CDS YP_004537121.1 334143965 10719696 complement(1026598..1028214) 1 NC_015581.1 KEGG: dau:Daud_0272 SSS family solute/sodium (Na+) symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein 1028214 10719696 Thicy_0870 Thioalkalimicrobium cyclicum ALM1 SSS sodium solute transporter superfamily protein YP_004537121.1 1026598 R 717773 CDS YP_004537122.1 334143966 10719697 complement(1028216..1028443) 1 NC_015581.1 KEGG: dau:Daud_0271 UspA domain-containing protein; UspA domain-containing protein 1028443 10719697 Thicy_0871 Thioalkalimicrobium cyclicum ALM1 UspA domain-containing protein YP_004537122.1 1028216 R 717773 CDS YP_004537123.1 334143967 10719698 complement(1028677..1030632) 1 NC_015581.1 PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: tcx:Tcr_1116 acetyl-CoA synthetase; acetyl-coenzyme A synthetase 1030632 10719698 Thicy_0872 Thioalkalimicrobium cyclicum ALM1 acetyl-coenzyme A synthetase YP_004537123.1 1028677 R 717773 CDS YP_004537124.1 334143968 10719699 complement(1030737..1034240) 1 NC_015581.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: tcx:Tcr_1115 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha 1034240 10719699 Thicy_0873 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit alpha YP_004537124.1 1030737 R 717773 CDS YP_004537125.1 334143969 10719700 1034333..1035121 1 NC_015581.1 PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: tcx:Tcr_1114 leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 1035121 10719700 Thicy_0874 Thioalkalimicrobium cyclicum ALM1 leucyl/phenylalanyl-tRNA--protein transferase YP_004537125.1 1034333 D 717773 CDS YP_004537126.1 334143970 10719701 1035114..1035521 1 NC_015581.1 KEGG: cbs:COXBURSA331_A1563 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 1035521 10719701 Thicy_0875 Thioalkalimicrobium cyclicum ALM1 succinate dehydrogenase, cytochrome b556 subunit YP_004537126.1 1035114 D 717773 CDS YP_004537127.1 334143971 10719702 1035518..1035850 1 NC_015581.1 KEGG: tcx:Tcr_2030 hypothetical protein; hypothetical protein 1035850 10719702 Thicy_0876 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537127.1 1035518 D 717773 CDS YP_004537128.1 334143972 10719703 1035860..1037695 1 NC_015581.1 TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: tcx:Tcr_2029 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 1037695 10719703 Thicy_0877 Thioalkalimicrobium cyclicum ALM1 succinate dehydrogenase, flavoprotein subunit YP_004537128.1 1035860 D 717773 CDS YP_004537129.1 334143973 10719704 1037726..1038460 1 NC_015581.1 TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: tcx:Tcr_2028 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1038460 10719704 Thicy_0878 Thioalkalimicrobium cyclicum ALM1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004537129.1 1037726 D 717773 CDS YP_004537130.1 334143974 10719705 1038460..1038726 1 NC_015581.1 KEGG: tcx:Tcr_2027 TPR repeat-containing protein; hypothetical protein 1038726 10719705 Thicy_0879 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537130.1 1038460 D 717773 CDS YP_004537131.1 334143975 10719706 1038793..1039011 1 NC_015581.1 TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: tcx:Tcr_1113 translation initiation factor IF-1; PFAM: S1, IF1 type; translation initiation factor IF-1 1039011 10719706 Thicy_0880 Thioalkalimicrobium cyclicum ALM1 translation initiation factor IF-1 YP_004537131.1 1038793 D 717773 CDS YP_004537132.1 334143976 10719707 complement(1039047..1039457) 1 NC_015581.1 TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: tcx:Tcr_0738 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase 1039457 10719707 Thicy_0881 Thioalkalimicrobium cyclicum ALM1 holo-ACP synthase YP_004537132.1 1039047 R 717773 CDS YP_004537133.1 334143977 10719708 complement(1039454..1040215) 1 NC_015581.1 PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: tcx:Tcr_0737 pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 1040215 10719708 Thicy_0882 Thioalkalimicrobium cyclicum ALM1 pyridoxine 5'-phosphate synthase YP_004537133.1 1039454 R 717773 CDS YP_004537134.1 334143978 10719709 complement(1040212..1041024) 1 NC_015581.1 KEGG: tcx:Tcr_0736 DNA repair protein RecO; HAMAP: DNA repair protein recO; PFAM: Recombination protein O, RecO; DNA repair protein recO 1041024 10719709 Thicy_0883 Thioalkalimicrobium cyclicum ALM1 DNA repair protein recO YP_004537134.1 1040212 R 717773 CDS YP_004537135.1 334143979 10719710 complement(1041021..1041932) 1 NC_015581.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: tcx:Tcr_0735 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era-like-protein 1041932 10719710 Thicy_0884 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein Era-like-protein YP_004537135.1 1041021 R 717773 CDS YP_004537136.1 334143980 10719711 complement(1041929..1042624) 1 NC_015581.1 KEGG: tcx:Tcr_0734 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding; ribonuclease 3 1042624 10719711 Thicy_0885 Thioalkalimicrobium cyclicum ALM1 ribonuclease 3 YP_004537136.1 1041929 R 717773 CDS YP_004537137.1 334143981 10719712 complement(1042624..1043394) 1 NC_015581.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: tcx:Tcr_0733 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 1043394 10719712 Thicy_0886 Thioalkalimicrobium cyclicum ALM1 signal peptidase I YP_004537137.1 1042624 R 717773 CDS YP_004537138.1 334143982 10719713 complement(1043394..1045205) 1 NC_015581.1 TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: tcx:Tcr_0732 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein lepA 1045205 10719713 Thicy_0887 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein lepA YP_004537138.1 1043394 R 717773 CDS YP_004537139.1 334143983 10719714 complement(1045348..1046778) 1 NC_015581.1 SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: tcx:Tcr_0731 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; protease Do 1046778 10719714 Thicy_0888 Thioalkalimicrobium cyclicum ALM1 protease Do YP_004537139.1 1045348 R 717773 CDS YP_004537140.1 334143984 10719715 complement(1046762..1047232) 1 NC_015581.1 PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: tcx:Tcr_0730 positive regulator of sigma(E), RseC/MucC; sigma E positive regulator RseC/MucC 1047232 10719715 Thicy_0889 Thioalkalimicrobium cyclicum ALM1 sigma E positive regulator RseC/MucC YP_004537140.1 1046762 R 717773 CDS YP_004537141.1 334143985 10719716 1047333..1048898 1 NC_015581.1 TIGRFAM: L-aspartate oxidase; KEGG: tcx:Tcr_0729 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 1048898 10719716 Thicy_0890 Thioalkalimicrobium cyclicum ALM1 L-aspartate oxidase YP_004537141.1 1047333 D 717773 CDS YP_004537142.1 334143986 10719717 complement(1049219..1049434) 1 NC_015581.1 hypothetical protein 1049434 10719717 Thicy_0891 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537142.1 1049219 R 717773 CDS YP_004537143.1 334143987 10719718 complement(1049421..1049660) 1 NC_015581.1 hypothetical protein 1049660 10719718 Thicy_0892 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537143.1 1049421 R 717773 CDS YP_004537144.1 334143988 10719719 complement(1049776..1049868) 1 NC_015581.1 hypothetical protein 1049868 10719719 Thicy_0893 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537144.1 1049776 R 717773 CDS YP_004537145.1 334143989 10719720 complement(1049861..1050124) 1 NC_015581.1 KEGG: aeh:Mlg_1786 addiction module antitoxin; TIGRFAM: Addiction module toxin, Txe/YoeB; Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; Txe/YoeB family addiction module toxin 1050124 10719720 Thicy_0894 Thioalkalimicrobium cyclicum ALM1 Txe/YoeB family addiction module toxin YP_004537145.1 1049861 R 717773 CDS YP_004537146.1 334143990 10719721 complement(1050129..1050371) 1 NC_015581.1 TIGRFAM: Prevent-host-death protein; KEGG: dal:Dalk_1773 prevent-host-death family protein; prevent-host-death family protein 1050371 10719721 Thicy_0895 Thioalkalimicrobium cyclicum ALM1 prevent-host-death family protein YP_004537146.1 1050129 R 717773 CDS YP_004537147.1 334143991 10719722 complement(1050600..1050746) 1 NC_015581.1 hypothetical protein 1050746 10719722 Thicy_0896 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537147.1 1050600 R 717773 CDS YP_004537148.1 334143992 10719723 complement(1050727..1050945) 1 NC_015581.1 KEGG: ava:Ava_0765 hypothetical protein; hypothetical protein 1050945 10719723 Thicy_0897 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537148.1 1050727 R 717773 CDS YP_004537149.1 334143993 10719724 complement(1050929..1051207) 1 NC_015581.1 PFAM: Protein of unknown function DUF497; KEGG: ppr:PBPRB0296 hypothetical protein; hypothetical protein 1051207 10719724 Thicy_0898 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537149.1 1050929 R 717773 CDS YP_004537150.1 334143994 10719725 complement(1051604..1051987) 1 NC_015581.1 PFAM: PilT protein, N-terminal; KEGG: cch:Cag_1389 nucleic acid binding protein; PilT protein domain-containing protein 1051987 10719725 Thicy_0899 Thioalkalimicrobium cyclicum ALM1 PilT protein domain-containing protein YP_004537150.1 1051604 R 717773 CDS YP_004537151.1 334143995 10719726 complement(1051991..1052221) 1 NC_015581.1 hypothetical protein 1052221 10719726 Thicy_0900 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537151.1 1051991 R 717773 CDS YP_004537152.1 334143996 10719727 complement(1052392..1052676) 1 NC_015581.1 KEGG: nla:NLA_6641 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C 1052676 10719727 Thicy_0901 Thioalkalimicrobium cyclicum ALM1 excinuclease ABC subunit C YP_004537152.1 1052392 R 717773 CDS YP_004537153.1 334143997 10719728 complement(1053134..1053508) 1 NC_015581.1 PFAM: PilT protein, N-terminal; KEGG: afl:Aflv_2624 PIN domain-containing protein; PilT protein domain-containing protein 1053508 10719728 Thicy_0902 Thioalkalimicrobium cyclicum ALM1 PilT protein domain-containing protein YP_004537153.1 1053134 R 717773 CDS YP_004537154.1 334143998 10719729 complement(1053505..1053735) 1 NC_015581.1 hypothetical protein 1053735 10719729 Thicy_0903 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537154.1 1053505 R 717773 CDS YP_004537155.1 334143999 10719730 complement(1053845..1054243) 1 NC_015581.1 PFAM: PilT protein, N-terminal; KEGG: ppw:PputW619_4624 PilT domain-containing protein; PilT protein domain-containing protein 1054243 10719730 Thicy_0904 Thioalkalimicrobium cyclicum ALM1 PilT protein domain-containing protein YP_004537155.1 1053845 R 717773 CDS YP_004537156.1 334144000 10719731 complement(1054240..1054476) 1 NC_015581.1 KEGG: pst:PSPTO_1046 virulence-associated protein, putative; virulence-associated protein 1054476 10719731 Thicy_0905 Thioalkalimicrobium cyclicum ALM1 virulence-associated protein YP_004537156.1 1054240 R 717773 CDS YP_004537157.1 334144001 10719732 complement(1054738..1055829) 1 NC_015581.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: tbd:Tbd_1774 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1055829 10719732 Thicy_0906 Thioalkalimicrobium cyclicum ALM1 UDP-glucose 4-epimerase YP_004537157.1 1054738 R 717773 CDS YP_004537158.1 334144002 10719733 complement(1055968..1057308) 1 NC_015581.1 KEGG: nam:NAMH_1655 sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1057308 10719733 Thicy_0907 Thioalkalimicrobium cyclicum ALM1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004537158.1 1055968 R 717773 CDS YP_004537159.1 334144003 10719734 complement(1057395..1057865) 1 NC_015581.1 TIGRFAM: Glycerol-3-phosphate cytidylyltransferase; Cytidyltransferase-related; KEGG: msu:MS0658 TagD protein; PFAM: Cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase 1057865 10719734 Thicy_0908 Thioalkalimicrobium cyclicum ALM1 glycerol-3-phosphate cytidylyltransferase YP_004537159.1 1057395 R 717773 CDS YP_004537160.1 334144004 10719735 complement(1057935..1058933) 1 NC_015581.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: hel:HELO_2398 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1058933 10719735 Thicy_0909 Thioalkalimicrobium cyclicum ALM1 UDP-glucose 4-epimerase YP_004537160.1 1057935 R 717773 CDS YP_004537161.1 334144005 10719737 complement(1059275..1059661) 1 NC_015581.1 PFAM: PilT protein, N-terminal; KEGG: cch:Cag_1389 nucleic acid binding protein; PilT protein domain-containing protein 1059661 10719737 Thicy_0911 Thioalkalimicrobium cyclicum ALM1 PilT protein domain-containing protein YP_004537161.1 1059275 R 717773 CDS YP_004537162.1 334144006 10719738 complement(1059665..1059895) 1 NC_015581.1 hypothetical protein 1059895 10719738 Thicy_0912 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537162.1 1059665 R 717773 CDS YP_004537163.1 334144007 10719740 complement(1060483..1060707) 1 NC_015581.1 hypothetical protein 1060707 10719740 Thicy_0914 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537163.1 1060483 R 717773 CDS YP_004537164.1 334144008 10719743 complement(1061480..1061716) 1 NC_015581.1 hypothetical protein 1061716 10719743 Thicy_0917 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537164.1 1061480 R 717773 CDS YP_004537165.1 334144009 10719745 complement(1061962..1062600) 1 NC_015581.1 KEGG: ppu:PP_1789 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 1062600 10719745 Thicy_0919 Thioalkalimicrobium cyclicum ALM1 HAD-superfamily hydrolase YP_004537165.1 1061962 R 717773 CDS YP_004537166.1 334144010 10719746 complement(1062590..1063660) 1 NC_015581.1 PFAM: Aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1063660 10719746 Thicy_0920 Thioalkalimicrobium cyclicum ALM1 aminoglycoside phosphotransferase YP_004537166.1 1062590 R 717773 CDS YP_004537167.1 334144011 10719747 complement(1063727..1064380) 1 NC_015581.1 PFAM: Acylneuraminate cytidylyltransferase; KEGG: cjd:JJD26997_0722 putative acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 1064380 10719747 Thicy_0921 Thioalkalimicrobium cyclicum ALM1 acylneuraminate cytidylyltransferase YP_004537167.1 1063727 R 717773 CDS YP_004537168.1 334144012 10719748 complement(1064383..1065147) 1 NC_015581.1 PFAM: HpcH/HpaI aldolase; KEGG: amt:Amet_0505 2-dehydro-3-deoxyglucarate aldolase; HpcH/HpaI aldolase 1065147 10719748 Thicy_0922 Thioalkalimicrobium cyclicum ALM1 HpcH/HpaI aldolase YP_004537168.1 1064383 R 717773 CDS YP_004537169.1 334144013 10719749 complement(1065144..1066760) 1 NC_015581.1 PFAM: Pyruvate carboxyltransferase; KEGG: ppu:PP_1791 aldolase/synthase, putative; pyruvate carboxyltransferase 1066760 10719749 Thicy_0923 Thioalkalimicrobium cyclicum ALM1 pyruvate carboxyltransferase YP_004537169.1 1065144 R 717773 CDS YP_004537170.1 334144014 10719750 complement(1066757..1069420) 1 NC_015581.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: pla:Plav_0208 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1069420 10719750 Thicy_0924 Thioalkalimicrobium cyclicum ALM1 glycerophosphoryl diester phosphodiesterase YP_004537170.1 1066757 R 717773 CDS YP_004537171.1 334144015 10719751 complement(1069410..1073177) 1 NC_015581.1 KEGG: ecc:c3694 hypothetical protein; PFAM: CDP-glycerol glycerophosphotransferase; Tetratricopeptide TPR-1; Glycosyl transferase, group 1; CDP-glycerol glycerophosphotransferase 1073177 10719751 Thicy_0925 Thioalkalimicrobium cyclicum ALM1 CDP-glycerol glycerophosphotransferase YP_004537171.1 1069410 R 717773 CDS YP_004537172.1 334144016 10719752 complement(1073174..1075000) 1 NC_015581.1 KEGG: dak:DaAHT2_1811 hypothetical protein; hypothetical protein 1075000 10719752 Thicy_0926 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537172.1 1073174 R 717773 CDS YP_004537173.1 334144017 10719753 complement(1075002..1075415) 1 NC_015581.1 KEGG: cpe:CPE0483 glycerol-3-phosphate cytidyltransferase; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; cytidyltransferase-related domain-containing protein 1075415 10719753 Thicy_0927 Thioalkalimicrobium cyclicum ALM1 cytidyltransferase-related domain-containing protein YP_004537173.1 1075002 R 717773 CDS YP_004537174.1 334144018 10719754 complement(1075432..1076886) 1 NC_015581.1 PFAM: LicD-like; KEGG: sna:Snas_0746 LicD family protein; LicD family protein 1076886 10719754 Thicy_0928 Thioalkalimicrobium cyclicum ALM1 LicD family protein YP_004537174.1 1075432 R 717773 CDS YP_004537175.1 334144019 10719755 complement(1076895..1077893) 1 NC_015581.1 hypothetical protein 1077893 10719755 Thicy_0929 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537175.1 1076895 R 717773 CDS YP_004537176.1 334144020 10719756 complement(1077931..1078932) 1 NC_015581.1 hypothetical protein 1078932 10719756 Thicy_0930 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537176.1 1077931 R 717773 CDS YP_004537177.1 334144021 10719757 complement(1078946..1080409) 1 NC_015581.1 PFAM: CDP-glycerol glycerophosphotransferase; KEGG: sro:Sros_1350 hypothetical protein; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1080409 10719757 Thicy_0931 Thioalkalimicrobium cyclicum ALM1 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_004537177.1 1078946 R 717773 CDS YP_004537178.1 334144022 10719758 complement(1080411..1081619) 1 NC_015581.1 PFAM: LicD-like; KEGG: pde:Pden_5030 hypothetical protein; LicD family protein 1081619 10719758 Thicy_0932 Thioalkalimicrobium cyclicum ALM1 LicD family protein YP_004537178.1 1080411 R 717773 CDS YP_004537179.1 334144023 10719759 complement(1081616..1081837) 1 NC_015581.1 hypothetical protein 1081837 10719759 Thicy_0933 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537179.1 1081616 R 717773 CDS YP_004537180.1 334144024 10719760 complement(1082066..1082737) 1 NC_015581.1 KEGG: hha:Hhal_2342 hypothetical protein; hypothetical protein 1082737 10719760 Thicy_0934 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537180.1 1082066 R 717773 CDS YP_004537181.1 334144025 10719761 complement(1082740..1083360) 1 NC_015581.1 KEGG: amt:Amet_0733 TPR repeat-containing protein; hypothetical protein 1083360 10719761 Thicy_0935 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537181.1 1082740 R 717773 CDS YP_004537182.1 334144026 10719762 complement(1083396..1083566) 1 NC_015581.1 hypothetical protein 1083566 10719762 Thicy_0936 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537182.1 1083396 R 717773 CDS YP_004537183.1 334144027 10719763 complement(1083568..1084899) 1 NC_015581.1 PFAM: O-antigen ligase-related; KEGG: apj:APJL_1150 hypothetical protein; O-antigen polymerase 1084899 10719763 Thicy_0937 Thioalkalimicrobium cyclicum ALM1 O-antigen polymerase YP_004537183.1 1083568 R 717773 CDS YP_004537184.1 334144028 10719764 complement(1084875..1085603) 1 NC_015581.1 KEGG: tgr:Tgr7_0475 hypothetical protein; hypothetical protein 1085603 10719764 Thicy_0938 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537184.1 1084875 R 717773 CDS YP_004537185.1 334144029 10719765 complement(1085596..1086657) 1 NC_015581.1 KEGG: pfo:Pfl01_0466 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I 1086657 10719765 Thicy_0939 Thioalkalimicrobium cyclicum ALM1 lipopolysaccharide heptosyltransferase I YP_004537185.1 1085596 R 717773 CDS YP_004537186.1 334144030 10719766 complement(1086650..1087714) 1 NC_015581.1 KEGG: tcx:Tcr_1513 hypothetical protein; hypothetical protein 1087714 10719766 Thicy_0940 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537186.1 1086650 R 717773 CDS YP_004537187.1 334144031 10719767 complement(1087701..1088813) 1 NC_015581.1 KEGG: tcx:Tcr_1513 hypothetical protein; hypothetical protein 1088813 10719767 Thicy_0941 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537187.1 1087701 R 717773 CDS YP_004537188.1 334144032 10719768 1088900..1089541 1 NC_015581.1 hypothetical protein 1089541 10719768 Thicy_0942 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537188.1 1088900 D 717773 CDS YP_004537189.1 334144033 10719769 complement(1089510..1090547) 1 NC_015581.1 KEGG: tcx:Tcr_1516 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I 1090547 10719769 Thicy_0943 Thioalkalimicrobium cyclicum ALM1 lipopolysaccharide heptosyltransferase I YP_004537189.1 1089510 R 717773 CDS YP_004537190.1 334144034 10719770 complement(1090544..1091149) 1 NC_015581.1 KEGG: gca:Galf_1479 AAA ATPase; AAA ATPase 1091149 10719770 Thicy_0944 Thioalkalimicrobium cyclicum ALM1 AAA ATPase YP_004537190.1 1090544 R 717773 CDS YP_004537191.1 334144035 10719771 complement(1091133..1091312) 1 NC_015581.1 hypothetical protein 1091312 10719771 Thicy_0945 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537191.1 1091133 R 717773 CDS YP_004537192.1 334144036 10719772 complement(1091358..1092326) 1 NC_015581.1 PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; HAMAP: ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: tcx:Tcr_1517 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1092326 10719772 Thicy_0946 Thioalkalimicrobium cyclicum ALM1 ADP-L-glycero-D-manno-heptose-6-epimerase YP_004537192.1 1091358 R 717773 CDS YP_004537193.1 334144037 10719773 complement(1092384..1093604) 1 NC_015581.1 hypothetical protein 1093604 10719773 Thicy_0947 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537193.1 1092384 R 717773 CDS YP_004537194.1 334144038 10719774 1093677..1094345 1 NC_015581.1 KEGG: tcx:Tcr_1518 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1094345 10719774 Thicy_0948 Thioalkalimicrobium cyclicum ALM1 protein tyrosine/serine phosphatase YP_004537194.1 1093677 D 717773 CDS YP_004537195.1 334144039 10719775 1094357..1096096 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: tcx:Tcr_1519 lipid A export ATP-binding/permease protein MsbA; PFAM: ABC transporter-like; ABC transporter, transmembrane region; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1096096 10719775 Thicy_0949 Thioalkalimicrobium cyclicum ALM1 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_004537195.1 1094357 D 717773 CDS YP_004537196.1 334144040 10719776 1096089..1097066 1 NC_015581.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_1520 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1097066 10719776 Thicy_0950 Thioalkalimicrobium cyclicum ALM1 lipid A biosynthesis acyltransferase YP_004537196.1 1096089 D 717773 CDS YP_004537197.1 334144041 10719777 complement(1097079..1097372) 1 NC_015581.1 TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; KEGG: hha:Hhal_0558 fis family transcriptional regulator; competence protein ComEA 1097372 10719777 Thicy_0951 Thioalkalimicrobium cyclicum ALM1 competence protein ComEA YP_004537197.1 1097079 R 717773 CDS YP_004537198.1 334144042 10719778 complement(1097497..1098450) 1 NC_015581.1 KEGG: cja:CJA_1443 ribosomal biogenesis GTPase; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related; ribosome biogenesis GTP-binding protein YlqF 1098450 10719778 Thicy_0952 Thioalkalimicrobium cyclicum ALM1 ribosome biogenesis GTP-binding protein YlqF YP_004537198.1 1097497 R 717773 CDS YP_004537199.1 334144043 10719779 complement(1098447..1099394) 1 NC_015581.1 KEGG: tcx:Tcr_1267 hypothetical protein; hypothetical protein 1099394 10719779 Thicy_0953 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537199.1 1098447 R 717773 CDS YP_004537200.1 334144044 10719780 complement(1099430..1099882) 1 NC_015581.1 PFAM: UspA; KEGG: tcx:Tcr_1714 hypothetical protein; UspA domain-containing protein 1099882 10719780 Thicy_0954 Thioalkalimicrobium cyclicum ALM1 UspA domain-containing protein YP_004537200.1 1099430 R 717773 CDS YP_004537201.1 334144045 10719781 complement(1100008..1100682) 1 NC_015581.1 KEGG: tcx:Tcr_1268 peptidase M22, glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein 1100682 10719781 Thicy_0955 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537201.1 1100008 R 717773 CDS YP_004537202.1 334144046 10719782 complement(1100684..1102654) 1 NC_015581.1 SMART: Helicase, ATP-dependent, c2 type; KEGG: tcx:Tcr_1269 helicase C2; helicase c2 1102654 10719782 Thicy_0956 Thioalkalimicrobium cyclicum ALM1 helicase c2 YP_004537202.1 1100684 R 717773 CDS YP_004537203.1 334144047 10719783 1102813..1102938 1 NC_015581.1 TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: tcx:Tcr_1270 ribosomal protein L36; PFAM: Ribosomal protein L36; 50S ribosomal protein L36 1102938 10719783 Thicy_0957 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L36 YP_004537203.1 1102813 D 717773 CDS YP_004537204.1 334144048 10719784 complement(1103034..1103642) 1 NC_015581.1 KEGG: tcx:Tcr_1272 ribonuclease H; PFAM: Ribonuclease HII/HIII; Ribonuclease H 1103642 10719784 Thicy_0958 Thioalkalimicrobium cyclicum ALM1 Ribonuclease H YP_004537204.1 1103034 R 717773 CDS YP_004537205.1 334144049 10719785 complement(1103643..1104833) 1 NC_015581.1 PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: tcx:Tcr_1273 lipid-A-disaccharide synthase; Lipid-A-disaccharide synthase 1104833 10719785 Thicy_0959 Thioalkalimicrobium cyclicum ALM1 Lipid-A-disaccharide synthase YP_004537205.1 1103643 R 717773 CDS YP_004537206.1 334144050 10719786 complement(1104841..1105623) 1 NC_015581.1 PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: tcx:Tcr_1274 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase 1105623 10719786 Thicy_0960 Thioalkalimicrobium cyclicum ALM1 acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase YP_004537206.1 1104841 R 717773 CDS YP_004537207.1 334144051 10719787 complement(1105636..1106073) 1 NC_015581.1 TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: tcx:Tcr_1275 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (3R)-hydroxymyristoyl-ACP dehydratase 1106073 10719787 Thicy_0961 Thioalkalimicrobium cyclicum ALM1 (3R)-hydroxymyristoyl-ACP dehydratase YP_004537207.1 1105636 R 717773 CDS YP_004537208.1 334144052 10719788 complement(1106108..1107157) 1 NC_015581.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: tcx:Tcr_1276 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1107157 10719788 Thicy_0962 Thioalkalimicrobium cyclicum ALM1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004537208.1 1106108 R 717773 CDS YP_004537209.1 334144053 10719789 complement(1107180..1107752) 1 NC_015581.1 PFAM: Outer membrane chaperone Skp (OmpH); KEGG: tcx:Tcr_1277 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1107752 10719789 Thicy_0963 Thioalkalimicrobium cyclicum ALM1 outer membrane chaperone Skp YP_004537209.1 1107180 R 717773 CDS YP_004537210.1 334144054 10719790 complement(1107790..1110093) 1 NC_015581.1 KEGG: tcx:Tcr_1278 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein 1110093 10719790 Thicy_0964 Thioalkalimicrobium cyclicum ALM1 outer membrane protein assembly complex, YaeT protein YP_004537210.1 1107790 R 717773 CDS YP_004537211.1 334144055 10719791 complement(1110086..1111495) 1 NC_015581.1 TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; KEGG: tcx:Tcr_1279 putative membrane-associated zinc metallopeptidase; SMART: PDZ/DHR/GLGF; membrane-associated zinc metalloprotease 1111495 10719791 Thicy_0965 Thioalkalimicrobium cyclicum ALM1 membrane-associated zinc metalloprotease YP_004537211.1 1110086 R 717773 CDS YP_004537212.1 334144056 10719792 complement(1111480..1112307) 1 NC_015581.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: pfs:PFLU1275 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1112307 10719792 Thicy_0966 Thioalkalimicrobium cyclicum ALM1 phosphatidate cytidylyltransferase YP_004537212.1 1111480 R 717773 CDS YP_004537213.1 334144057 10719793 complement(1112301..1113062) 1 NC_015581.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: tcx:Tcr_1281 undecaprenyl diphosphate synthase; UDP pyrophosphate synthase 1113062 10719793 Thicy_0967 Thioalkalimicrobium cyclicum ALM1 UDP pyrophosphate synthase YP_004537213.1 1112301 R 717773 CDS YP_004537214.1 334144058 10719794 complement(1113156..1113713) 1 NC_015581.1 TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: tcx:Tcr_1282 ribosome recycling factor; PFAM: Ribosome recycling factor; Ribosome-recycling factor 1113713 10719794 Thicy_0968 Thioalkalimicrobium cyclicum ALM1 Ribosome-recycling factor YP_004537214.1 1113156 R 717773 CDS YP_004537215.1 334144059 10719795 complement(1113715..1114434) 1 NC_015581.1 TIGRFAM: Uridylate kinase, bacteria; KEGG: tcx:Tcr_1283 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase 1114434 10719795 Thicy_0969 Thioalkalimicrobium cyclicum ALM1 uridylate kinase YP_004537215.1 1113715 R 717773 CDS YP_004537216.1 334144060 10719796 complement(1114608..1115495) 1 NC_015581.1 TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: tcx:Tcr_1284 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; elongation factor Ts 1115495 10719796 Thicy_0970 Thioalkalimicrobium cyclicum ALM1 elongation factor Ts YP_004537216.1 1114608 R 717773 CDS YP_004537217.1 334144061 10719797 complement(1115577..1116320) 1 NC_015581.1 KEGG: tcx:Tcr_1285 ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 1116320 10719797 Thicy_0971 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S2 YP_004537217.1 1115577 R 717773 CDS YP_004537218.1 334144062 10719798 1116568..1117350 1 NC_015581.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: psa:PST_1536 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 1117350 10719798 Thicy_0972 Thioalkalimicrobium cyclicum ALM1 methionine aminopeptidase YP_004537218.1 1116568 D 717773 CDS YP_004537219.1 334144063 10719799 1117366..1120002 1 NC_015581.1 KEGG: tcx:Tcr_1287 UTP-GlnB (protein PII) uridylyltransferase, GlnD; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region; UTP-GlnB uridylyltransferase, GlnD 1120002 10719799 Thicy_0973 Thioalkalimicrobium cyclicum ALM1 UTP-GlnB uridylyltransferase, GlnD YP_004537219.1 1117366 D 717773 CDS YP_004537220.1 334144064 10719801 complement(1120207..1120560) 1 NC_015581.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asa:ASA_0777 hypothetical protein; antibiotic biosynthesis monooxygenase 1120560 10719801 Thicy_0974 Thioalkalimicrobium cyclicum ALM1 antibiotic biosynthesis monooxygenase YP_004537220.1 1120207 R 717773 CDS YP_004537221.1 334144065 10719802 complement(1120639..1121511) 1 NC_015581.1 hypothetical protein 1121511 10719802 Thicy_0975 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537221.1 1120639 R 717773 CDS YP_004537222.1 334144066 10719803 complement(1121511..1122587) 1 NC_015581.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: amc:MADE_00991 dTDP-glucose 4,6 dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 1122587 10719803 Thicy_0976 Thioalkalimicrobium cyclicum ALM1 dTDP-glucose 4,6-dehydratase YP_004537222.1 1121511 R 717773 CDS YP_004537223.1 334144067 10719804 complement(1122584..1123639) 1 NC_015581.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: fph:Fphi_1252 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1123639 10719804 Thicy_0977 Thioalkalimicrobium cyclicum ALM1 dTDP-4-dehydrorhamnose reductase YP_004537223.1 1122584 R 717773 CDS YP_004537224.1 334144068 10719805 complement(1123620..1124186) 1 NC_015581.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: ctt:CtCNB1_2759 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1124186 10719805 Thicy_0978 Thioalkalimicrobium cyclicum ALM1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004537224.1 1123620 R 717773 CDS YP_004537225.1 334144069 10719807 complement(1124440..1125729) 1 NC_015581.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: tcx:Tcr_0768 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; seryl-tRNA synthetase 1125729 10719807 Thicy_0979 Thioalkalimicrobium cyclicum ALM1 seryl-tRNA synthetase YP_004537225.1 1124440 R 717773 CDS YP_004537226.1 334144070 10719808 complement(1125754..1126143) 1 NC_015581.1 TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: tcx:Tcr_0767 CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein 1126143 10719808 Thicy_0980 Thioalkalimicrobium cyclicum ALM1 CrcB-like protein YP_004537226.1 1125754 R 717773 CDS YP_004537227.1 334144071 10719809 complement(1126140..1127477) 1 NC_015581.1 KEGG: tcx:Tcr_0766 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; AAA ATPase central domain-containing protein 1127477 10719809 Thicy_0981 Thioalkalimicrobium cyclicum ALM1 AAA ATPase central domain-containing protein YP_004537227.1 1126140 R 717773 CDS YP_004537228.1 334144072 10719810 complement(1127486..1128109) 1 NC_015581.1 PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: tcx:Tcr_0765 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1128109 10719810 Thicy_0982 Thioalkalimicrobium cyclicum ALM1 outer membrane lipoprotein carrier protein LolA YP_004537228.1 1127486 R 717773 CDS YP_004537229.1 334144073 10719811 complement(1128150..1130843) 1 NC_015581.1 PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: tcx:Tcr_0764 cell divisionFtsK/SpoIIIE; cell division protein FtsK/SpoIIIE 1130843 10719811 Thicy_0983 Thioalkalimicrobium cyclicum ALM1 cell division protein FtsK/SpoIIIE YP_004537229.1 1128150 R 717773 CDS YP_004537230.1 334144074 10719812 1131010..1131963 1 NC_015581.1 TIGRFAM: Thioredoxin reductase; KEGG: tcx:Tcr_0763 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1131963 10719812 Thicy_0984 Thioalkalimicrobium cyclicum ALM1 thioredoxin reductase YP_004537230.1 1131010 D 717773 CDS YP_004537231.1 334144075 10719813 complement(1132108..1133682) 1 NC_015581.1 TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: tcx:Tcr_0970 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 1133682 10719813 Thicy_0985 Thioalkalimicrobium cyclicum ALM1 peptide chain release factor 3 YP_004537231.1 1132108 R 717773 CDS YP_004537232.1 334144076 10719814 complement(1133775..1134821) 1 NC_015581.1 KEGG: tcx:Tcr_1330 SecF protein; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 1134821 10719814 Thicy_0986 Thioalkalimicrobium cyclicum ALM1 protein-export membrane protein SecF YP_004537232.1 1133775 R 717773 CDS YP_004537233.1 334144077 10719815 complement(1134831..1136714) 1 NC_015581.1 KEGG: tcx:Tcr_1331 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 1136714 10719815 Thicy_0987 Thioalkalimicrobium cyclicum ALM1 protein-export membrane protein SecD YP_004537233.1 1134831 R 717773 CDS YP_004537234.1 334144078 10719816 complement(1136817..1137251) 1 NC_015581.1 KEGG: tcx:Tcr_1332 preprotein translocase, YajC subunit; TIGRFAM: YajC; PFAM: YajC; preprotein translocase subunit YajC 1137251 10719816 Thicy_0988 Thioalkalimicrobium cyclicum ALM1 preprotein translocase subunit YajC YP_004537234.1 1136817 R 717773 CDS YP_004537235.1 334144079 10719817 complement(1137355..1138470) 1 NC_015581.1 PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: tcx:Tcr_1333 queuine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1138470 10719817 Thicy_0989 Thioalkalimicrobium cyclicum ALM1 queuine tRNA-ribosyltransferase YP_004537235.1 1137355 R 717773 CDS YP_004537236.1 334144080 10719818 complement(1138576..1139607) 1 NC_015581.1 TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: tcx:Tcr_1334 S-adenosylmethionine; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1139607 10719818 Thicy_0990 Thioalkalimicrobium cyclicum ALM1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_004537236.1 1138576 R 717773 CDS YP_004537237.1 334144081 10719819 complement(1140377..1142104) 1 NC_015581.1 KEGG: vfi:VF_1123 putative lipoprotein; hypothetical protein 1142104 10719819 Thicy_0991 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537237.1 1140377 R 717773 CDS YP_004537238.1 334144082 10719820 complement(1142328..1144073) 1 NC_015581.1 KEGG: vfi:VF_1123 putative lipoprotein; hypothetical protein 1144073 10719820 Thicy_0992 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537238.1 1142328 R 717773 CDS YP_004537239.1 334144083 10719821 1144409..1144546 1 NC_015581.1 hypothetical protein 1144546 10719821 Thicy_0993 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537239.1 1144409 D 717773 CDS YP_004537240.1 334144084 10719822 complement(1144501..1146042) 1 NC_015581.1 KEGG: tcx:Tcr_2018 hypothetical protein; hypothetical protein 1146042 10719822 Thicy_0994 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537240.1 1144501 R 717773 CDS YP_004537241.1 334144085 10719823 complement(1146066..1146242) 1 NC_015581.1 hypothetical protein 1146242 10719823 Thicy_0995 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537241.1 1146066 R 717773 CDS YP_004537242.1 334144086 10719824 complement(1146393..1147175) 1 NC_015581.1 KEGG: tcx:Tcr_0260 type II secretion system protein N; hypothetical protein 1147175 10719824 Thicy_0996 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537242.1 1146393 R 717773 CDS YP_004537243.1 334144087 10719825 complement(1147172..1147684) 1 NC_015581.1 PFAM: General secretion pathway M protein; KEGG: tcx:Tcr_0259 general secretion pathway M protein; general secretion pathway protein M 1147684 10719825 Thicy_0997 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein M YP_004537243.1 1147172 R 717773 CDS YP_004537244.1 334144088 10719826 complement(1147668..1148765) 1 NC_015581.1 PFAM: General secretion pathway L; KEGG: tcx:Tcr_0258 general secretion pathway L; general secretion pathway protein L 1148765 10719826 Thicy_0998 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein L YP_004537244.1 1147668 R 717773 CDS YP_004537245.1 334144089 10719827 complement(1148758..1149717) 1 NC_015581.1 KEGG: tcx:Tcr_0257 general secretion pathway protein K; general secretion pathway protein K 1149717 10719827 Thicy_0999 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein K YP_004537245.1 1148758 R 717773 CDS YP_004537246.1 334144090 10719828 complement(1149704..1150327) 1 NC_015581.1 TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: tcx:Tcr_0256 general secretion pathway protein J; general secretion pathway protein J 1150327 10719828 Thicy_1000 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein J YP_004537246.1 1149704 R 717773 CDS YP_004537247.1 334144091 10719829 complement(1150324..1150713) 1 NC_015581.1 KEGG: tcx:Tcr_0255 general secretion pathway protein I; general secretion pathway protein I 1150713 10719829 Thicy_1001 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein I YP_004537247.1 1150324 R 717773 CDS YP_004537248.1 334144092 10719830 complement(1150682..1151155) 1 NC_015581.1 KEGG: tcx:Tcr_0254 general secretion pathway protein H; general secretion pathway protein H 1151155 10719830 Thicy_1002 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein H YP_004537248.1 1150682 R 717773 CDS YP_004537249.1 334144093 10719831 complement(1151159..1151596) 1 NC_015581.1 KEGG: tcx:Tcr_0253 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G 1151596 10719831 Thicy_1003 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein G YP_004537249.1 1151159 R 717773 CDS YP_004537250.1 334144094 10719832 complement(1151605..1152846) 1 NC_015581.1 KEGG: tcx:Tcr_0252 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F 1152846 10719832 Thicy_1004 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein F YP_004537250.1 1151605 R 717773 CDS YP_004537251.1 334144095 10719833 complement(1152848..1154290) 1 NC_015581.1 TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: tcx:Tcr_0251 type II secretion system protein E; SMART: ATPase, AAA+ type, core; general secretory pathway protein E 1154290 10719833 Thicy_1005 Thioalkalimicrobium cyclicum ALM1 general secretory pathway protein E YP_004537251.1 1152848 R 717773 CDS YP_004537252.1 334144096 10719834 complement(1154293..1156377) 1 NC_015581.1 KEGG: tcx:Tcr_0250 type II and III secretion system protein; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like; general secretion pathway protein D 1156377 10719834 Thicy_1006 Thioalkalimicrobium cyclicum ALM1 general secretion pathway protein D YP_004537252.1 1154293 R 717773 CDS YP_004537253.1 334144097 10719835 complement(1156402..1157295) 1 NC_015581.1 KEGG: tcx:Tcr_0249 hypothetical protein; hypothetical protein 1157295 10719835 Thicy_1007 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537253.1 1156402 R 717773 CDS YP_004537254.1 334144098 10719836 1157631..1158791 1 NC_015581.1 PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: alv:Alvin_0082 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase MsrA 1158791 10719836 Thicy_1008 Thioalkalimicrobium cyclicum ALM1 peptide methionine sulfoxide reductase MsrA YP_004537254.1 1157631 D 717773 CDS YP_004537255.1 334144099 10719837 1158781..1159395 1 NC_015581.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rce:RC1_1835 translocator protein, LysE family protein; lysine exporter protein LysE/YggA 1159395 10719837 Thicy_1009 Thioalkalimicrobium cyclicum ALM1 lysine exporter protein LysE/YggA YP_004537255.1 1158781 D 717773 CDS YP_004537256.1 334144100 10719838 1159424..1160845 1 NC_015581.1 KEGG: tcx:Tcr_2019 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 1160845 10719838 Thicy_1010 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537256.1 1159424 D 717773 CDS YP_004537257.1 334144101 10719839 1161012..1162085 1 NC_015581.1 KEGG: tcx:Tcr_0727 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; folate-binding protein YgfZ 1162085 10719839 Thicy_1011 Thioalkalimicrobium cyclicum ALM1 folate-binding protein YgfZ YP_004537257.1 1161012 D 717773 CDS YP_004537258.1 334144102 10719840 complement(1162082..1163590) 1 NC_015581.1 KEGG: par:Psyc_2003 DNA helicase; DNA helicase 1163590 10719840 Thicy_1012 Thioalkalimicrobium cyclicum ALM1 DNA helicase YP_004537258.1 1162082 R 717773 CDS YP_004537259.1 334144103 10719841 complement(1163587..1165065) 1 NC_015581.1 PFAM: Sodium/solute symporter; KEGG: cja:CJA_3387 high affinity choline transporter; Na+/solute symporter 1165065 10719841 Thicy_1013 Thioalkalimicrobium cyclicum ALM1 Na+/solute symporter YP_004537259.1 1163587 R 717773 CDS YP_004537260.1 334144104 10719843 complement(1165336..1166010) 1 NC_015581.1 KEGG: tcx:Tcr_0901 ExsB; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like; exsB protein 1166010 10719843 Thicy_1014 Thioalkalimicrobium cyclicum ALM1 exsB protein YP_004537260.1 1165336 R 717773 CDS YP_004537261.1 334144105 10719844 complement(1166010..1166759) 1 NC_015581.1 TIGRFAM: Tol-Pal system, YbgF; KEGG: tcx:Tcr_0900 TPR repeat-containing protein; tol-pal system protein YbgF 1166759 10719844 Thicy_1015 Thioalkalimicrobium cyclicum ALM1 tol-pal system protein YbgF YP_004537261.1 1166010 R 717773 CDS YP_004537262.1 334144106 10719845 complement(1166768..1167340) 1 NC_015581.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tcx:Tcr_0899 OmpA/MotB; OmpA/MotB domain-containing protein 1167340 10719845 Thicy_1016 Thioalkalimicrobium cyclicum ALM1 OmpA/MotB domain-containing protein YP_004537262.1 1166768 R 717773 CDS YP_004537263.1 334144107 10719846 complement(1167383..1168711) 1 NC_015581.1 TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: tcx:Tcr_0898 TolB-like; PFAM: TolB, N-terminal; WD40-like Beta Propeller; protein tolB 1168711 10719846 Thicy_1017 Thioalkalimicrobium cyclicum ALM1 protein tolB YP_004537263.1 1167383 R 717773 CDS YP_004537264.1 334144108 10719847 complement(1168753..1169763) 1 NC_015581.1 KEGG: tcx:Tcr_0897 hypothetical protein; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA; protein TolA 1169763 10719847 Thicy_1018 Thioalkalimicrobium cyclicum ALM1 protein TolA YP_004537264.1 1168753 R 717773 CDS YP_004537265.1 334144109 10719848 complement(1169760..1170212) 1 NC_015581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tcx:Tcr_0896 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1170212 10719848 Thicy_1019 Thioalkalimicrobium cyclicum ALM1 biopolymer transport protein ExbD/TolR YP_004537265.1 1169760 R 717773 CDS YP_004537266.1 334144110 10719849 complement(1170225..1170902) 1 NC_015581.1 KEGG: tcx:Tcr_0895 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 1170902 10719849 Thicy_1020 Thioalkalimicrobium cyclicum ALM1 protein TolQ YP_004537266.1 1170225 R 717773 CDS YP_004537267.1 334144111 10719850 complement(1170907..1171917) 1 NC_015581.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: tcx:Tcr_0894 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB 1171917 10719850 Thicy_1021 Thioalkalimicrobium cyclicum ALM1 Holliday junction ATP-dependent DNA helicase ruvB YP_004537267.1 1170907 R 717773 CDS YP_004537268.1 334144112 10719851 complement(1171914..1172525) 1 NC_015581.1 SMART: Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Bacterial DNA recombination protein RuvA; KEGG: tcx:Tcr_0893 Holliday junction DNA helicase RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA 1172525 10719851 Thicy_1022 Thioalkalimicrobium cyclicum ALM1 Holliday junction ATP-dependent DNA helicase ruvA YP_004537268.1 1171914 R 717773 CDS YP_004537269.1 334144113 10719852 complement(1172565..1173095) 1 NC_015581.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: tcx:Tcr_0892 crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 1173095 10719852 Thicy_1023 Thioalkalimicrobium cyclicum ALM1 Crossover junction endodeoxyribonuclease ruvC YP_004537269.1 1172565 R 717773 CDS YP_004537270.1 334144114 10719853 complement(1173095..1173850) 1 NC_015581.1 TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: alv:Alvin_0153 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein 1173850 10719853 Thicy_1024 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537270.1 1173095 R 717773 CDS YP_004537271.1 334144115 10719854 complement(1173882..1174979) 1 NC_015581.1 TIGRFAM: Quinolinate synthetase A; KEGG: tcx:Tcr_0891 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 1174979 10719854 Thicy_1025 Thioalkalimicrobium cyclicum ALM1 quinolinate synthetase complex subunit A YP_004537271.1 1173882 R 717773 CDS YP_004537272.1 334144116 10719855 complement(1174979..1176766) 1 NC_015581.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: tcx:Tcr_0890 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase 1176766 10719855 Thicy_1026 Thioalkalimicrobium cyclicum ALM1 aspartyl-tRNA synthetase YP_004537272.1 1174979 R 717773 CDS YP_004537273.1 334144117 10719856 complement(1176862..1177554) 1 NC_015581.1 PFAM: Protein of unknown function DUF502; KEGG: tcx:Tcr_0889 hypothetical protein; hypothetical protein 1177554 10719856 Thicy_1027 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537273.1 1176862 R 717773 CDS YP_004537274.1 334144118 10719857 1177692..1178570 1 NC_015581.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pin:Ping_3154 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1178570 10719857 Thicy_1028 Thioalkalimicrobium cyclicum ALM1 short-chain dehydrogenase/reductase SDR YP_004537274.1 1177692 D 717773 CDS YP_004537275.1 334144119 10719858 1178573..1179478 1 NC_015581.1 KEGG: tcx:Tcr_1388 polyprenyl synthetase; PFAM: Polyprenyl synthetase; Geranyltranstransferase 1179478 10719858 Thicy_1029 Thioalkalimicrobium cyclicum ALM1 Geranyltranstransferase YP_004537275.1 1178573 D 717773 CDS YP_004537276.1 334144120 10719859 1179524..1179910 1 NC_015581.1 KEGG: tcx:Tcr_1389 putative 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; queuosine biosynthesis protein QueD 1179910 10719859 Thicy_1030 Thioalkalimicrobium cyclicum ALM1 queuosine biosynthesis protein QueD YP_004537276.1 1179524 D 717773 CDS YP_004537277.1 334144121 10719860 1179927..1180733 1 NC_015581.1 KEGG: tcx:Tcr_1391 prepilin peptidase; PFAM: Peptidase A24A, prepilin type IV; prepilin peptidase 1180733 10719860 Thicy_1031 Thioalkalimicrobium cyclicum ALM1 prepilin peptidase YP_004537277.1 1179927 D 717773 CDS YP_004537278.1 334144122 10719861 complement(1180761..1181090) 1 NC_015581.1 KEGG: tcx:Tcr_1392 hypothetical protein; hypothetical protein 1181090 10719861 Thicy_1032 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537278.1 1180761 R 717773 CDS YP_004537279.1 334144123 10719862 1181278..1182345 1 NC_015581.1 TIGRFAM: DHAP synthase, class 1; KEGG: tcx:Tcr_1393 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1182345 10719862 Thicy_1033 Thioalkalimicrobium cyclicum ALM1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004537279.1 1181278 D 717773 CDS YP_004537280.1 334144124 10719863 complement(1182304..1182417) 1 NC_015581.1 hypothetical protein 1182417 10719863 Thicy_1034 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537280.1 1182304 R 717773 CDS YP_004537281.1 334144125 10719864 complement(1182389..1183372) 1 NC_015581.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: tcx:Tcr_1395 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; thiamine-monophosphate kinase 1183372 10719864 Thicy_1035 Thioalkalimicrobium cyclicum ALM1 thiamine-monophosphate kinase YP_004537281.1 1182389 R 717773 CDS YP_004537282.1 334144126 10719865 complement(1183381..1183884) 1 NC_015581.1 TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: tcx:Tcr_1396 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 1183884 10719865 Thicy_1036 Thioalkalimicrobium cyclicum ALM1 NusB antitermination factor YP_004537282.1 1183381 R 717773 CDS YP_004537283.1 334144127 10719866 complement(1183888..1184349) 1 NC_015581.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: tcx:Tcr_1397 riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1184349 10719866 Thicy_1037 Thioalkalimicrobium cyclicum ALM1 6,7-dimethyl-8-ribityllumazine synthase YP_004537283.1 1183888 R 717773 CDS YP_004537284.1 334144128 10719867 complement(1184354..1185469) 1 NC_015581.1 TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: tcx:Tcr_1398 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1185469 10719867 Thicy_1038 Thioalkalimicrobium cyclicum ALM1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004537284.1 1184354 R 717773 CDS YP_004537285.1 334144129 10719868 complement(1185501..1186148) 1 NC_015581.1 TIGRFAM: Lumazine-binding protein; KEGG: tcx:Tcr_1399 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 1186148 10719868 Thicy_1039 Thioalkalimicrobium cyclicum ALM1 riboflavin synthase subunit alpha YP_004537285.1 1185501 R 717773 CDS YP_004537286.1 334144130 10719869 complement(1186150..1187310) 1 NC_015581.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; manually curated; KEGG: hel:HELO_3591 riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; riboflavin biosynthesis protein RibD 1187310 10719869 Thicy_1040 Thioalkalimicrobium cyclicum ALM1 riboflavin biosynthesis protein RibD YP_004537286.1 1186150 R 717773 CDS YP_004537287.1 334144131 10719870 complement(1187322..1187789) 1 NC_015581.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: tcx:Tcr_1401 transcriptional regulator NrdR; PFAM: ATP-cone; transcriptional repressor nrdR 1187789 10719870 Thicy_1041 Thioalkalimicrobium cyclicum ALM1 transcriptional repressor nrdR YP_004537287.1 1187322 R 717773 CDS YP_004537288.1 334144132 10719871 complement(1187803..1189077) 1 NC_015581.1 KEGG: tcx:Tcr_1402 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 1189077 10719871 Thicy_1042 Thioalkalimicrobium cyclicum ALM1 glycine hydroxymethyltransferase YP_004537288.1 1187803 R 717773 CDS YP_004537289.1 334144133 10719872 1189236..1190903 1 NC_015581.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: tcx:Tcr_1403 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding protein 1190903 10719872 Thicy_1043 Thioalkalimicrobium cyclicum ALM1 ChvD family ATP-binding protein YP_004537289.1 1189236 D 717773 CDS YP_004537290.1 334144134 10719873 1190914..1191831 1 NC_015581.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; PAS fold-4; KEGG: tcx:Tcr_1404 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1191831 10719873 Thicy_1044 Thioalkalimicrobium cyclicum ALM1 diguanylate cyclase YP_004537290.1 1190914 D 717773 CDS YP_004537291.1 334144135 10719874 1191886..1192368 1 NC_015581.1 KEGG: tcx:Tcr_2005 hypothetical protein; hypothetical protein 1192368 10719874 Thicy_1045 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537291.1 1191886 D 717773 CDS YP_004537292.1 334144136 10719875 complement(1192429..1193100) 1 NC_015581.1 KEGG: tcx:Tcr_1382 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family 1193100 10719875 Thicy_1046 Thioalkalimicrobium cyclicum ALM1 two component transcriptional regulator, LuxR family YP_004537292.1 1192429 R 717773 CDS YP_004537293.1 334144137 10719876 1193383..1194768 1 NC_015581.1 HAMAP: Fumarate hydratase class II; KEGG: tcx:Tcr_1384 fumarate hydratase; PFAM: Fumarate lyase; Fumarase C, C-terminal; class II fumarate hydratase 1194768 10719876 Thicy_1047 Thioalkalimicrobium cyclicum ALM1 class II fumarate hydratase YP_004537293.1 1193383 D 717773 CDS YP_004537294.1 334144138 10719877 1194793..1195161 1 NC_015581.1 KEGG: tcx:Tcr_1385 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1195161 10719877 Thicy_1048 Thioalkalimicrobium cyclicum ALM1 thioredoxin YP_004537294.1 1194793 D 717773 CDS YP_004537295.1 334144139 10719878 complement(1195214..1196113) 1 NC_015581.1 PFAM: ROK; KEGG: tcx:Tcr_0885 ROK; ROK family protein 1196113 10719878 Thicy_1049 Thioalkalimicrobium cyclicum ALM1 ROK family protein YP_004537295.1 1195214 R 717773 CDS YP_004537296.1 334144140 10719879 complement(1196110..1196928) 1 NC_015581.1 PFAM: Protein of unknown function DUF455; KEGG: tcx:Tcr_0883 hypothetical protein; hypothetical protein 1196928 10719879 Thicy_1050 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537296.1 1196110 R 717773 CDS YP_004537297.1 334144141 10719880 complement(1197059..1197439) 1 NC_015581.1 KEGG: tcx:Tcr_0882 hypothetical protein; hypothetical protein 1197439 10719880 Thicy_1051 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537297.1 1197059 R 717773 CDS YP_004537298.1 334144142 10719881 complement(1197551..1198027) 1 NC_015581.1 TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: tcx:Tcr_0880 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreA 1198027 10719881 Thicy_1052 Thioalkalimicrobium cyclicum ALM1 transcription elongation factor GreA YP_004537298.1 1197551 R 717773 CDS YP_004537299.1 334144143 10719882 complement(1198101..1201316) 1 NC_015581.1 TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: tcx:Tcr_0879 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; carbamoyl-phosphate synthase large subunit 1201316 10719882 Thicy_1053 Thioalkalimicrobium cyclicum ALM1 carbamoyl-phosphate synthase large subunit YP_004537299.1 1198101 R 717773 CDS YP_004537300.1 334144144 10719883 complement(1201340..1202482) 1 NC_015581.1 TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: tcx:Tcr_0878 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit 1202482 10719883 Thicy_1054 Thioalkalimicrobium cyclicum ALM1 carbamoyl-phosphate synthase small subunit YP_004537300.1 1201340 R 717773 CDS YP_004537301.1 334144145 10719884 complement(1202684..1203496) 1 NC_015581.1 PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: tcx:Tcr_0872 dihydrodipicolinate reductase; dihydrodipicolinate reductase 1203496 10719884 Thicy_1055 Thioalkalimicrobium cyclicum ALM1 dihydrodipicolinate reductase YP_004537301.1 1202684 R 717773 CDS YP_004537302.1 334144146 10719885 complement(1203493..1204644) 1 NC_015581.1 SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: tcx:Tcr_0871 heat shock protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal; chaperone protein dnaJ 1204644 10719885 Thicy_1056 Thioalkalimicrobium cyclicum ALM1 chaperone protein dnaJ YP_004537302.1 1203493 R 717773 CDS YP_004537303.1 334144147 10719886 complement(1204799..1206715) 1 NC_015581.1 TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: tcx:Tcr_0870 heat shock protein HSP70; PFAM: Heat shock protein 70; chaperone protein dnaK 1206715 10719886 Thicy_1057 Thioalkalimicrobium cyclicum ALM1 chaperone protein dnaK YP_004537303.1 1204799 R 717773 CDS YP_004537304.1 334144148 10719887 complement(1206806..1207378) 1 NC_015581.1 KEGG: tcx:Tcr_0869 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE 1207378 10719887 Thicy_1058 Thioalkalimicrobium cyclicum ALM1 protein grpE YP_004537304.1 1206806 R 717773 CDS YP_004537305.1 334144149 10719888 1207566..1208441 1 NC_015581.1 KEGG: tcx:Tcr_0867 NAD(+) kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; inorganic polyphosphate/ATP-NAD kinase 1208441 10719888 Thicy_1059 Thioalkalimicrobium cyclicum ALM1 inorganic polyphosphate/ATP-NAD kinase YP_004537305.1 1207566 D 717773 CDS YP_004537306.1 334144150 10719889 1208441..1210111 1 NC_015581.1 KEGG: tcx:Tcr_0866 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; DNA repair protein RecN 1210111 10719889 Thicy_1060 Thioalkalimicrobium cyclicum ALM1 DNA repair protein RecN YP_004537306.1 1208441 D 717773 CDS YP_004537307.1 334144151 10719890 complement(1210121..1210552) 1 NC_015581.1 PFAM: Ferric-uptake regulator; KEGG: tcx:Tcr_1405 ferric uptake regulator family protein; Fur family ferric uptake regulator 1210552 10719890 Thicy_1061 Thioalkalimicrobium cyclicum ALM1 Fur family ferric uptake regulator YP_004537307.1 1210121 R 717773 CDS YP_004537308.1 334144152 10719891 1210731..1211087 1 NC_015581.1 PFAM: SmpA/OmlA; KEGG: tcx:Tcr_1406 SmpA/OmlA; SmpA/OmlA domain-containing protein 1211087 10719891 Thicy_1062 Thioalkalimicrobium cyclicum ALM1 SmpA/OmlA domain-containing protein YP_004537308.1 1210731 D 717773 CDS YP_004537309.1 334144153 10719892 complement(1211093..1211386) 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0125; KEGG: lhk:LHK_00780 UPF0125 protein CV_3462; hypothetical protein 1211386 10719892 Thicy_1063 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537309.1 1211093 R 717773 CDS YP_004537310.1 334144154 10719893 complement(1211379..1211810) 1 NC_015581.1 PFAM: Streptomyces cyclase/dehydrase; KEGG: tcx:Tcr_1408 cyclase/dehydrase; cyclase/dehydrase 1211810 10719893 Thicy_1064 Thioalkalimicrobium cyclicum ALM1 cyclase/dehydrase YP_004537310.1 1211379 R 717773 CDS YP_004537311.1 334144155 10719894 1211842..1212333 1 NC_015581.1 TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: tcx:Tcr_1409 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 1212333 10719894 Thicy_1065 Thioalkalimicrobium cyclicum ALM1 SsrA-binding protein YP_004537311.1 1211842 D 717773 CDS YP_004537312.1 334144156 10719895 complement(1212322..1212945) 1 NC_015581.1 KEGG: tcx:Tcr_0549 arylesterase; PFAM: Lipase, GDSL; lysophospholipase 1212945 10719895 Thicy_1066 Thioalkalimicrobium cyclicum ALM1 lysophospholipase YP_004537312.1 1212322 R 717773 CDS YP_004537313.1 334144157 10719896 1212988..1213680 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_0550 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1213680 10719896 Thicy_1067 Thioalkalimicrobium cyclicum ALM1 phosphonate-transporting ATPase YP_004537313.1 1212988 D 717773 CDS YP_004537314.1 334144158 10719897 1213671..1216145 1 NC_015581.1 PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tcx:Tcr_0551 hypothetical protein; hypothetical protein 1216145 10719897 Thicy_1068 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537314.1 1213671 D 717773 CDS YP_004537315.1 334144159 10719898 complement(1216186..1217715) 1 NC_015581.1 KEGG: tcx:Tcr_1563 threonine dehydratase, biosynthetic; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase, biosynthetic 1217715 10719898 Thicy_1069 Thioalkalimicrobium cyclicum ALM1 threonine dehydratase, biosynthetic YP_004537315.1 1216186 R 717773 CDS YP_004537316.1 334144160 10719899 1217885..1219975 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_1564 TonB-dependent receptor; TonB-dependent receptor 1219975 10719899 Thicy_1070 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004537316.1 1217885 D 717773 CDS YP_004537317.1 334144161 10719900 1220056..1220673 1 NC_015581.1 PFAM: Copper chaperone SCO1/SenC; KEGG: tcx:Tcr_1565 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1220673 10719900 Thicy_1071 Thioalkalimicrobium cyclicum ALM1 electron transport protein SCO1/SenC YP_004537317.1 1220056 D 717773 CDS YP_004537318.1 334144162 10719901 1220710..1221225 1 NC_015581.1 PFAM: DR1885-like metal-binding protein; KEGG: tcx:Tcr_1566 hypothetical protein; hypothetical protein 1221225 10719901 Thicy_1072 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537318.1 1220710 D 717773 CDS YP_004537319.1 334144163 10719902 complement(1221229..1221552) 1 NC_015581.1 KEGG: sde:Sde_1197 hypothetical protein; hypothetical protein 1221552 10719902 Thicy_1073 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537319.1 1221229 R 717773 CDS YP_004537320.1 334144164 10719903 1221611..1221907 1 NC_015581.1 KEGG: tcx:Tcr_0760 hypothetical protein; hypothetical protein 1221907 10719903 Thicy_1074 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537320.1 1221611 D 717773 CDS YP_004537321.1 334144165 10719904 1222030..1222245 1 NC_015581.1 KEGG: xau:Xaut_1105 hypothetical protein; hypothetical protein 1222245 10719904 Thicy_1075 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537321.1 1222030 D 717773 CDS YP_004537322.1 334144166 10719905 complement(1222273..1224261) 1 NC_015581.1 KEGG: tcx:Tcr_1174 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 1224261 10719905 Thicy_1076 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004537322.1 1222273 R 717773 CDS YP_004537323.1 334144167 10719906 complement(1224248..1224952) 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: tcx:Tcr_1173 lipoprotein releasing system, ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1224952 10719906 Thicy_1077 Thioalkalimicrobium cyclicum ALM1 phosphonate-transporting ATPase YP_004537323.1 1224248 R 717773 CDS YP_004537324.1 334144168 10719907 complement(1224945..1226198) 1 NC_015581.1 KEGG: tcx:Tcr_1172 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted; lipoprotein releasing system transmembrane protein LolC/E family 1226198 10719907 Thicy_1078 Thioalkalimicrobium cyclicum ALM1 lipoprotein releasing system transmembrane protein LolC/E family YP_004537324.1 1224945 R 717773 CDS YP_004537325.1 334144169 10719908 complement(1226214..1226843) 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0126; KEGG: tcx:Tcr_1171 hypothetical protein; hypothetical protein 1226843 10719908 Thicy_1079 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537325.1 1226214 R 717773 CDS YP_004537326.1 334144170 10719909 1226988..1230470 1 NC_015581.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: tcx:Tcr_1168 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair coupling factor 1230470 10719909 Thicy_1080 Thioalkalimicrobium cyclicum ALM1 transcription-repair coupling factor YP_004537326.1 1226988 D 717773 CDS YP_004537327.1 334144171 10719910 1230490..1231161 1 NC_015581.1 KEGG: tcx:Tcr_1167 hypothetical protein; hypothetical protein 1231161 10719910 Thicy_1081 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537327.1 1230490 D 717773 CDS YP_004537328.1 334144172 10719911 complement(1231213..1231479) 1 NC_015581.1 TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: tcx:Tcr_1166 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor 1231479 10719911 Thicy_1082 Thioalkalimicrobium cyclicum ALM1 cell division topological specificity factor YP_004537328.1 1231213 R 717773 CDS YP_004537329.1 334144173 10719912 complement(1231482..1232294) 1 NC_015581.1 KEGG: tcx:Tcr_1165 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD 1232294 10719912 Thicy_1083 Thioalkalimicrobium cyclicum ALM1 septum site-determining protein MinD YP_004537329.1 1231482 R 717773 CDS YP_004537330.1 334144174 10719913 complement(1232345..1233076) 1 NC_015581.1 TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: tcx:Tcr_1164 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein minC 1233076 10719913 Thicy_1084 Thioalkalimicrobium cyclicum ALM1 septum site-determining protein minC YP_004537330.1 1232345 R 717773 CDS YP_004537331.1 334144175 10719914 complement(1233092..1233682) 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0227; KEGG: sdl:Sdel_0037 protein of unknown function UPF0227; hypothetical protein 1233682 10719914 Thicy_1085 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537331.1 1233092 R 717773 CDS YP_004537332.1 334144176 10719915 complement(1233694..1233912) 1 NC_015581.1 KEGG: tkm:TK90_2060 hypothetical protein; hypothetical protein 1233912 10719915 Thicy_1086 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537332.1 1233694 R 717773 CDS YP_004537333.1 334144177 10719916 complement(1233905..1234672) 1 NC_015581.1 PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: tcx:Tcr_0960 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 1234672 10719916 Thicy_1087 Thioalkalimicrobium cyclicum ALM1 3-deoxy-manno-octulosonate cytidylyltransferase YP_004537333.1 1233905 R 717773 CDS YP_004537334.1 334144178 10719917 complement(1234678..1234884) 1 NC_015581.1 KEGG: tcx:Tcr_0959 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343; hypothetical protein 1234884 10719917 Thicy_1088 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537334.1 1234678 R 717773 CDS YP_004537335.1 334144179 10719918 complement(1234913..1236016) 1 NC_015581.1 PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: nhl:Nhal_0526 tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1236016 10719918 Thicy_1089 Thioalkalimicrobium cyclicum ALM1 tetraacyldisaccharide 4'-kinase YP_004537335.1 1234913 R 717773 CDS YP_004537336.1 334144180 10719919 complement(1236016..1237992) 1 NC_015581.1 PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: cja:CJA_3513 glutathione-regulated potassium-efflux system protein; sodium/hydrogen exchanger 1237992 10719919 Thicy_1090 Thioalkalimicrobium cyclicum ALM1 sodium/hydrogen exchanger YP_004537336.1 1236016 R 717773 CDS YP_004537337.1 334144181 10719920 complement(1238082..1240799) 1 NC_015581.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tgr:Tgr7_0291 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase 1240799 10719920 Thicy_1091 Thioalkalimicrobium cyclicum ALM1 P-type HAD superfamily ATPase YP_004537337.1 1238082 R 717773 CDS YP_004537338.1 334144182 10719921 complement(1240822..1242321) 1 NC_015581.1 PFAM: Protein of unknown function DUF1538; KEGG: wsu:WS0013 hypothetical protein; hypothetical protein 1242321 10719921 Thicy_1092 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537338.1 1240822 R 717773 CDS YP_004537339.1 334144183 10719922 complement(1242328..1242732) 1 NC_015581.1 KEGG: wsu:WS0014 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein 1242732 10719922 Thicy_1093 Thioalkalimicrobium cyclicum ALM1 CBS domain-containing protein YP_004537339.1 1242328 R 717773 CDS YP_004537340.1 334144184 10719923 complement(1242732..1243082) 1 NC_015581.1 KEGG: wsu:WS0015 hypothetical protein; hypothetical protein 1243082 10719923 Thicy_1094 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537340.1 1242732 R 717773 CDS YP_004537341.1 334144185 10719924 complement(1243188..1245647) 1 NC_015581.1 KEGG: tcx:Tcr_0957 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 1245647 10719924 Thicy_1095 Thioalkalimicrobium cyclicum ALM1 DNA internalization-related competence protein ComEC/Rec2 YP_004537341.1 1243188 R 717773 CDS YP_004537342.1 334144186 10719925 1245646..1246194 1 NC_015581.1 KEGG: tcx:Tcr_0956 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2062; hypothetical protein 1246194 10719925 Thicy_1096 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537342.1 1245646 D 717773 CDS YP_004537343.1 334144187 10719926 complement(1246211..1248619) 1 NC_015581.1 KEGG: tcx:Tcr_0955 ATP-dependent protease, putative; ATP-dependent protease 1248619 10719926 Thicy_1097 Thioalkalimicrobium cyclicum ALM1 ATP-dependent protease YP_004537343.1 1246211 R 717773 CDS YP_004537344.1 334144188 10719927 1248653..1249591 1 NC_015581.1 KEGG: tcx:Tcr_0953 putative D-cysteine desulfhydrase, DcyD; putative D-cysteine desulfhydrase, DcyD 1249591 10719927 Thicy_1098 Thioalkalimicrobium cyclicum ALM1 putative D-cysteine desulfhydrase, DcyD YP_004537344.1 1248653 D 717773 CDS YP_004537345.1 334144189 10719928 1249726..1250361 1 NC_015581.1 KEGG: tcx:Tcr_1529 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 1250361 10719928 Thicy_1099 Thioalkalimicrobium cyclicum ALM1 rhodanese-like protein YP_004537345.1 1249726 D 717773 CDS YP_004537346.1 334144190 10719929 complement(1250434..1257804) 1 NC_015581.1 KEGG: har:HEAR1853 hypothetical protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; GLUG; filamentous hemagglutinin family outer membrane protein 1257804 10719929 Thicy_1100 Thioalkalimicrobium cyclicum ALM1 filamentous hemagglutinin family outer membrane protein YP_004537346.1 1250434 R 717773 CDS YP_004537347.1 334144191 10719930 complement(1257815..1259467) 1 NC_015581.1 PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: mmw:Mmwyl1_3061 polypeptide-transport-associated domain-containing protein; Polypeptide-transport-associated domain-containing protein ShlB-type 1259467 10719930 Thicy_1101 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein ShlB-type YP_004537347.1 1257815 R 717773 CDS YP_004537348.1 334144192 10719931 complement(1259631..1261901) 1 NC_015581.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: tcx:Tcr_1112 AAA ATPase; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding protein ClpA 1261901 10719931 Thicy_1102 Thioalkalimicrobium cyclicum ALM1 ATP-dependent Clp protease ATP-binding protein ClpA YP_004537348.1 1259631 R 717773 CDS YP_004537349.1 334144193 10719932 complement(1261929..1262225) 1 NC_015581.1 KEGG: tcx:Tcr_1111 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS 1262225 10719932 Thicy_1103 Thioalkalimicrobium cyclicum ALM1 ATP-dependent Clp protease adapter protein clpS YP_004537349.1 1261929 R 717773 CDS YP_004537350.1 334144194 10719933 1262544..1263113 1 NC_015581.1 KEGG: etr:ETAE_2051 ribosomal large subunit pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase Rsu 1263113 10719933 Thicy_1104 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rsu YP_004537350.1 1262544 D 717773 CDS YP_004537351.1 334144195 10719934 1263146..1264315 1 NC_015581.1 TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: tcx:Tcr_1099 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; tRNA-specific 2-thiouridylase mnmA 1264315 10719934 Thicy_1105 Thioalkalimicrobium cyclicum ALM1 tRNA-specific 2-thiouridylase mnmA YP_004537351.1 1263146 D 717773 CDS YP_004537352.1 334144196 10719935 1264322..1265002 1 NC_015581.1 KEGG: tcx:Tcr_1098 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274; High frequency lysogenization protein hflD 1265002 10719935 Thicy_1106 Thioalkalimicrobium cyclicum ALM1 High frequency lysogenization protein hflD YP_004537352.1 1264322 D 717773 CDS YP_004537353.1 334144197 10719936 complement(1265022..1265717) 1 NC_015581.1 PFAM: Glutathione S-transferase, N-terminal; KEGG: tcx:Tcr_1309 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 1265717 10719936 Thicy_1107 Thioalkalimicrobium cyclicum ALM1 glutathione S-transferase domain-containing protein YP_004537353.1 1265022 R 717773 CDS YP_004537354.1 334144198 10719937 complement(1265760..1266017) 1 NC_015581.1 PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tcx:Tcr_1311 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1266017 10719937 Thicy_1108 Thioalkalimicrobium cyclicum ALM1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004537354.1 1265760 R 717773 CDS YP_004537355.1 334144199 10719938 complement(1266046..1267497) 1 NC_015581.1 PFAM: Peptidase U32; KEGG: tcx:Tcr_1312 peptidase U32; peptidase U32 1267497 10719938 Thicy_1109 Thioalkalimicrobium cyclicum ALM1 peptidase U32 YP_004537355.1 1266046 R 717773 CDS YP_004537356.1 334144200 10719939 complement(1267716..1268183) 1 NC_015581.1 KEGG: swp:swp_4704 hypothetical protein; hypothetical protein 1268183 10719939 Thicy_1110 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537356.1 1267716 R 717773 CDS YP_004537357.1 334144201 10719940 complement(1268253..1269599) 1 NC_015581.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: tcx:Tcr_1314 hypothetical protein; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; 30S ribosomal protein S12 methylthiotransferase RimO 1269599 10719940 Thicy_1111 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S12 methylthiotransferase RimO YP_004537357.1 1268253 R 717773 CDS YP_004537358.1 334144202 10719941 complement(1269632..1270147) 1 NC_015581.1 hypothetical protein 1270147 10719941 Thicy_1112 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537358.1 1269632 R 717773 CDS YP_004537359.1 334144203 10719942 complement(1270231..1270596) 1 NC_015581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gca:Galf_1707 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1270596 10719942 Thicy_1113 Thioalkalimicrobium cyclicum ALM1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004537359.1 1270231 R 717773 CDS YP_004537360.1 334144204 10719943 1270693..1271520 1 NC_015581.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG: tcx:Tcr_1289 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1271520 10719943 Thicy_1114 Thioalkalimicrobium cyclicum ALM1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004537360.1 1270693 D 717773 CDS YP_004537361.1 334144205 10719944 1271577..1271909 1 NC_015581.1 KEGG: swd:Swoo_2189 arsenate reductase and related; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like; ArsC family protein 1271909 10719944 Thicy_1115 Thioalkalimicrobium cyclicum ALM1 ArsC family protein YP_004537361.1 1271577 D 717773 CDS YP_004537362.1 334144206 10719945 1271906..1273057 1 NC_015581.1 TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: tcx:Tcr_1291 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; Succinyl-diaminopimelate desuccinylase 1273057 10719945 Thicy_1116 Thioalkalimicrobium cyclicum ALM1 Succinyl-diaminopimelate desuccinylase YP_004537362.1 1271906 D 717773 CDS YP_004537363.1 334144207 10719946 1273058..1273288 1 NC_015581.1 hypothetical protein 1273288 10719946 Thicy_1117 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537363.1 1273058 D 717773 CDS YP_004537364.1 334144208 10719947 1273323..1273814 1 NC_015581.1 KEGG: tcx:Tcr_1292 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1273814 10719947 Thicy_1118 Thioalkalimicrobium cyclicum ALM1 Crp/Fnr family transcriptional regulator YP_004537364.1 1273323 D 717773 CDS YP_004537365.1 334144209 10719948 complement(1273854..1275299) 1 NC_015581.1 PFAM: Sodium:neurotransmitter symporter; KEGG: tcx:Tcr_1293 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 1275299 10719948 Thicy_1119 Thioalkalimicrobium cyclicum ALM1 sodium:neurotransmitter symporter YP_004537365.1 1273854 R 717773 CDS YP_004537366.1 334144210 10719949 1275359..1276384 1 NC_015581.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: tcx:Tcr_1294 UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 1276384 10719949 Thicy_1120 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004537366.1 1275359 D 717773 CDS YP_004537367.1 334144211 10719950 complement(1276379..1277428) 1 NC_015581.1 KEGG: mep:MPQ_1010 glycoside hydrolase family 3 domain protein; HAMAP: Beta-hexosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; beta-hexosaminidase 1277428 10719950 Thicy_1121 Thioalkalimicrobium cyclicum ALM1 beta-hexosaminidase YP_004537367.1 1276379 R 717773 CDS YP_004537368.1 334144212 10719951 complement(1277447..1278250) 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nhl:Nhal_2857 binding-protein-dependent transport systems inner membrane component; ABC transporter permease 1278250 10719951 Thicy_1122 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537368.1 1277447 R 717773 CDS YP_004537369.1 334144213 10719952 complement(1278247..1279167) 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcx:Tcr_1299 binding-protein dependent transport system inner membrane protein; ABC transporter permease 1279167 10719952 Thicy_1123 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537369.1 1278247 R 717773 CDS YP_004537370.1 334144214 10719953 complement(1279178..1279660) 1 NC_015581.1 PFAM: YkuD domain; KEGG: gpb:HDN1F_12890 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1279660 10719953 Thicy_1124 Thioalkalimicrobium cyclicum ALM1 ErfK/YbiS/YcfS/YnhG family protein YP_004537370.1 1279178 R 717773 CDS YP_004537371.1 334144215 10719954 complement(1279671..1281320) 1 NC_015581.1 KEGG: tcx:Tcr_1372 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 1281320 10719954 Thicy_1125 Thioalkalimicrobium cyclicum ALM1 NAD+ synthetase YP_004537371.1 1279671 R 717773 CDS YP_004537372.1 334144216 10719955 complement(1281322..1282206) 1 NC_015581.1 TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: tcx:Tcr_1373 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; succinyl-CoA synthetase subunit alpha 1282206 10719955 Thicy_1126 Thioalkalimicrobium cyclicum ALM1 succinyl-CoA synthetase subunit alpha YP_004537372.1 1281322 R 717773 CDS YP_004537373.1 334144217 10719956 complement(1282203..1283378) 1 NC_015581.1 PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: tcx:Tcr_1374 succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase [ADP-forming] subunit beta 1283378 10719956 Thicy_1127 Thioalkalimicrobium cyclicum ALM1 succinyl-CoA ligase [ADP-forming] subunit beta YP_004537373.1 1282203 R 717773 CDS YP_004537374.1 334144218 10719957 1283499..1283777 1 NC_015581.1 KEGG: pst:PSPTO_0825 hypothetical protein; hypothetical protein 1283777 10719957 Thicy_1128 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537374.1 1283499 D 717773 CDS YP_004537375.1 334144219 10719958 complement(1283774..1284226) 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: sde:Sde_2564 ribosomal protein S2; FKBP-type peptidylprolyl isomerase 1284226 10719958 Thicy_1129 Thioalkalimicrobium cyclicum ALM1 FKBP-type peptidylprolyl isomerase YP_004537375.1 1283774 R 717773 CDS YP_004537376.1 334144220 10719959 complement(1284240..1284635) 1 NC_015581.1 KEGG: tcx:Tcr_1378 hypothetical protein; hypothetical protein 1284635 10719959 Thicy_1130 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537376.1 1284240 R 717773 CDS YP_004537377.1 334144221 10719960 1284753..1285202 1 NC_015581.1 KEGG: slt:Slit_0171 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022; hypothetical protein 1285202 10719960 Thicy_1131 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537377.1 1284753 D 717773 CDS YP_004537378.1 334144222 10719961 1285230..1286390 1 NC_015581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1381 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1286390 10719961 Thicy_1132 Thioalkalimicrobium cyclicum ALM1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004537378.1 1285230 D 717773 CDS YP_004537379.1 334144223 10719962 complement(1286416..1286868) 1 NC_015581.1 hypothetical protein 1286868 10719962 Thicy_1133 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537379.1 1286416 R 717773 CDS YP_004537380.1 334144224 10719963 complement(1286931..1288784) 1 NC_015581.1 PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: tcx:Tcr_0721 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase 1288784 10719963 Thicy_1134 Thioalkalimicrobium cyclicum ALM1 xenobiotic-transporting ATPase YP_004537380.1 1286931 R 717773 CDS YP_004537381.1 334144225 10719964 complement(1288781..1289569) 1 NC_015581.1 KEGG: tcx:Tcr_0720 TatD-related deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase 1289569 10719964 Thicy_1135 Thioalkalimicrobium cyclicum ALM1 TatD family hydrolase YP_004537381.1 1288781 R 717773 CDS YP_004537382.1 334144226 10719965 complement(1289578..1290588) 1 NC_015581.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tcx:Tcr_0719 DNA-directed DNA polymerase; DNA polymerase III subunit delta' 1290588 10719965 Thicy_1136 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit delta' YP_004537382.1 1289578 R 717773 CDS YP_004537383.1 334144227 10719966 complement(1290576..1291208) 1 NC_015581.1 PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: pmy:Pmen_1633 thymidylate kinase; thymidylate kinase 1291208 10719966 Thicy_1137 Thioalkalimicrobium cyclicum ALM1 thymidylate kinase YP_004537383.1 1290576 R 717773 CDS YP_004537384.1 334144228 10719967 complement(1291260..1292396) 1 NC_015581.1 KEGG: tcx:Tcr_0717 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase 1292396 10719967 Thicy_1138 Thioalkalimicrobium cyclicum ALM1 aminodeoxychorismate lyase YP_004537384.1 1291260 R 717773 CDS YP_004537385.1 334144229 10719968 complement(1292409..1293338) 1 NC_015581.1 PFAM: Aminotransferase, class IV; KEGG: tcx:Tcr_0716 aminotransferase, class IV; class IV aminotransferase 1293338 10719968 Thicy_1139 Thioalkalimicrobium cyclicum ALM1 class IV aminotransferase YP_004537385.1 1292409 R 717773 CDS YP_004537386.1 334144230 10719969 complement(1293335..1294750) 1 NC_015581.1 KEGG: tcx:Tcr_0715 hypothetical protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase 1294750 10719969 Thicy_1140 Thioalkalimicrobium cyclicum ALM1 anthranilate synthase YP_004537386.1 1293335 R 717773 CDS YP_004537387.1 334144231 10719970 complement(1294751..1295992) 1 NC_015581.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: tcx:Tcr_0714 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase II 1295992 10719970 Thicy_1141 Thioalkalimicrobium cyclicum ALM1 3-oxoacyl-ACP synthase II YP_004537387.1 1294751 R 717773 CDS YP_004537388.1 334144232 10719971 complement(1296093..1296329) 1 NC_015581.1 TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: tcx:Tcr_0713 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein 1296329 10719971 Thicy_1142 Thioalkalimicrobium cyclicum ALM1 acyl carrier protein YP_004537388.1 1296093 R 717773 CDS YP_004537389.1 334144233 10719972 complement(1296462..1297202) 1 NC_015581.1 KEGG: tcx:Tcr_0712 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1297202 10719972 Thicy_1143 Thioalkalimicrobium cyclicum ALM1 3-oxoacyl-ACP reductase YP_004537389.1 1296462 R 717773 CDS YP_004537390.1 334144234 10719973 complement(1297203..1298144) 1 NC_015581.1 TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: tgr:Tgr7_1836 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 1298144 10719973 Thicy_1144 Thioalkalimicrobium cyclicum ALM1 malonyl CoA-acyl carrier protein transacylase YP_004537390.1 1297203 R 717773 CDS YP_004537391.1 334144235 10719974 complement(1298202..1299197) 1 NC_015581.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: tcx:Tcr_0710 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase III 1299197 10719974 Thicy_1145 Thioalkalimicrobium cyclicum ALM1 3-oxoacyl-ACP synthase III YP_004537391.1 1298202 R 717773 CDS YP_004537392.1 334144236 10719975 complement(1299202..1300239) 1 NC_015581.1 TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: tcx:Tcr_0709 fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis plsX protein; phosphate acyltransferase 1300239 10719975 Thicy_1146 Thioalkalimicrobium cyclicum ALM1 phosphate acyltransferase YP_004537392.1 1299202 R 717773 CDS YP_004537393.1 334144237 10719976 complement(1300246..1300422) 1 NC_015581.1 TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: tcx:Tcr_0708 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 1300422 10719976 Thicy_1147 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L32 YP_004537393.1 1300246 R 717773 CDS YP_004537394.1 334144238 10719977 complement(1300480..1301001) 1 NC_015581.1 PFAM: Protein of unknown function DUF177; KEGG: tcx:Tcr_0707 hypothetical protein; hypothetical protein 1301001 10719977 Thicy_1148 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537394.1 1300480 R 717773 CDS YP_004537395.1 334144239 10719978 1301078..1301713 1 NC_015581.1 TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: fbl:Fbal_1391 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 1301713 10719978 Thicy_1149 Thioalkalimicrobium cyclicum ALM1 Septum formation protein Maf YP_004537395.1 1301078 D 717773 CDS YP_004537396.1 334144240 10719979 complement(1301702..1302364) 1 NC_015581.1 KEGG: tcx:Tcr_0705 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 1302364 10719979 Thicy_1150 Thioalkalimicrobium cyclicum ALM1 HAD-superfamily hydrolase YP_004537396.1 1301702 R 717773 CDS YP_004537397.1 334144241 10719980 complement(1302361..1303323) 1 NC_015581.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: tcx:Tcr_0704 pseudouridine synthase, RluD; SMART: RNA-binding S4; pseudouridine synthase Rlu family protein 1303323 10719980 Thicy_1151 Thioalkalimicrobium cyclicum ALM1 pseudouridine synthase Rlu family protein YP_004537397.1 1302361 R 717773 CDS YP_004537398.1 334144242 10719981 1303866..1306370 1 NC_015581.1 KEGG: tcx:Tcr_0703 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 1306370 10719981 Thicy_1152 Thioalkalimicrobium cyclicum ALM1 ribonuclease, Rne/Rng family YP_004537398.1 1303866 D 717773 CDS YP_004537399.1 334144243 10719982 complement(1306417..1307058) 1 NC_015581.1 PFAM: DTW; KEGG: swp:swp_4781 DTW protein; DTW domain containing protein 1307058 10719982 Thicy_1153 Thioalkalimicrobium cyclicum ALM1 DTW domain containing protein YP_004537399.1 1306417 R 717773 CDS YP_004537400.1 334144244 10719983 1307072..1307497 1 NC_015581.1 PFAM: GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1307497 10719983 Thicy_1154 Thioalkalimicrobium cyclicum ALM1 GCN5-like N-acetyltransferase YP_004537400.1 1307072 D 717773 CDS YP_004537401.1 334144245 10719984 complement(1307520..1308467) 1 NC_015581.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_1555 LysR family transcriptional regulator; LysR family transcriptional regulator 1308467 10719984 Thicy_1155 Thioalkalimicrobium cyclicum ALM1 LysR family transcriptional regulator YP_004537401.1 1307520 R 717773 CDS YP_004537402.1 334144246 10719985 complement(1308619..1309860) 1 NC_015581.1 KEGG: tcx:Tcr_1557 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding; FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 1309860 10719985 Thicy_1156 Thioalkalimicrobium cyclicum ALM1 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004537402.1 1308619 R 717773 CDS YP_004537403.1 334144247 10719986 complement(1309876..1311099) 1 NC_015581.1 KEGG: tcx:Tcr_1558 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 1311099 10719986 Thicy_1157 Thioalkalimicrobium cyclicum ALM1 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004537403.1 1309876 R 717773 CDS YP_004537404.1 334144248 10719987 complement(1311075..1312457) 1 NC_015581.1 PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: tcx:Tcr_1559 peptidase M24; peptidase M24 1312457 10719987 Thicy_1158 Thioalkalimicrobium cyclicum ALM1 peptidase M24 YP_004537404.1 1311075 R 717773 CDS YP_004537405.1 334144249 10719988 complement(1312474..1313046) 1 NC_015581.1 KEGG: tcx:Tcr_1560 YgfB and YecA; YgfB and YecA protein 1313046 10719988 Thicy_1159 Thioalkalimicrobium cyclicum ALM1 YgfB and YecA protein YP_004537405.1 1312474 R 717773 CDS YP_004537406.1 334144250 10719989 1313175..1313480 1 NC_015581.1 KEGG: tcx:Tcr_1561 hypothetical protein; hypothetical protein 1313480 10719989 Thicy_1160 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537406.1 1313175 D 717773 CDS YP_004537407.1 334144251 10719990 1313494..1315278 1 NC_015581.1 PFAM: Bacterial surface antigen (D15); KEGG: ilo:IL1887 outer membrane protein; surface antigen (D15) 1315278 10719990 Thicy_1161 Thioalkalimicrobium cyclicum ALM1 surface antigen (D15) YP_004537407.1 1313494 D 717773 CDS YP_004537408.1 334144252 10719991 1315289..1319239 1 NC_015581.1 PFAM: Protein of unknown function DUF490; KEGG: noc:Noc_0371 hypothetical protein; hypothetical protein 1319239 10719991 Thicy_1162 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537408.1 1315289 D 717773 CDS YP_004537409.1 334144253 10719992 complement(1319261..1319887) 1 NC_015581.1 KEGG: tcx:Tcr_1562 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1319887 10719992 Thicy_1163 Thioalkalimicrobium cyclicum ALM1 5-formyltetrahydrofolate cyclo-ligase YP_004537409.1 1319261 R 717773 CDS YP_004537410.1 334144254 10719994 1320239..1320880 1 NC_015581.1 KEGG: sde:Sde_1352 hypothetical protein; hypothetical protein 1320880 10719994 Thicy_1164 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537410.1 1320239 D 717773 CDS YP_004537411.1 334144255 10719995 complement(1320890..1321702) 1 NC_015581.1 hypothetical protein 1321702 10719995 Thicy_1165 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537411.1 1320890 R 717773 CDS YP_004537412.1 334144256 10719996 complement(1321699..1323069) 1 NC_015581.1 hypothetical protein 1323069 10719996 Thicy_1166 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537412.1 1321699 R 717773 CDS YP_004537413.1 334144257 10719997 complement(1323056..1324291) 1 NC_015581.1 PFAM: Type II secretion system F domain; KEGG: tcx:Tcr_0642 type II secretion system protein; type II secretion system F domain-containing protein 1324291 10719997 Thicy_1167 Thioalkalimicrobium cyclicum ALM1 type II secretion system F domain-containing protein YP_004537413.1 1323056 R 717773 CDS YP_004537414.1 334144258 10719998 complement(1324284..1325813) 1 NC_015581.1 KEGG: tcx:Tcr_0641 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; type II secretion system protein E 1325813 10719998 Thicy_1168 Thioalkalimicrobium cyclicum ALM1 type II secretion system protein E YP_004537414.1 1324284 R 717773 CDS YP_004537415.1 334144259 10719999 complement(1325818..1327338) 1 NC_015581.1 PFAM: Type II/III secretion system; KEGG: tcx:Tcr_0639 type II and III secretion system protein; type II and III secretion system protein 1327338 10719999 Thicy_1169 Thioalkalimicrobium cyclicum ALM1 type II and III secretion system protein YP_004537415.1 1325818 R 717773 CDS YP_004537416.1 334144260 10720000 complement(1327417..1328799) 1 NC_015581.1 TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: tcx:Tcr_0501 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1328799 10720000 Thicy_1170 Thioalkalimicrobium cyclicum ALM1 oxygen-independent coproporphyrinogen III oxidase YP_004537416.1 1327417 R 717773 CDS YP_004537417.1 334144261 10720001 complement(1328951..1331266) 1 NC_015581.1 HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; KEGG: tcx:Tcr_0499 23S rRNA m(2)G2445 methyltransferase; PFAM: Putative RNA methylase; THUMP; Protein of unknown function methylase putative; Ribosomal RNA large subunit methyltransferase L 1331266 10720001 Thicy_1171 Thioalkalimicrobium cyclicum ALM1 Ribosomal RNA large subunit methyltransferase L YP_004537417.1 1328951 R 717773 CDS YP_004537418.1 334144262 10720002 1331377..1332600 1 NC_015581.1 KEGG: tcx:Tcr_0498 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like; lytic murein transglycosylase 1332600 10720002 Thicy_1172 Thioalkalimicrobium cyclicum ALM1 lytic murein transglycosylase YP_004537418.1 1331377 D 717773 CDS YP_004537419.1 334144263 10720003 1332623..1333717 1 NC_015581.1 KEGG: tcx:Tcr_1704 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1333717 10720003 Thicy_1173 Thioalkalimicrobium cyclicum ALM1 RND family efflux transporter MFP subunit YP_004537419.1 1332623 D 717773 CDS YP_004537420.1 334144264 10720004 1333732..1336806 1 NC_015581.1 PFAM: Acriflavin resistance protein; KEGG: hna:Hneap_0816 acriflavin resistance protein; acriflavin resistance protein 1336806 10720004 Thicy_1174 Thioalkalimicrobium cyclicum ALM1 acriflavin resistance protein YP_004537420.1 1333732 D 717773 CDS YP_004537421.1 334144265 10720005 complement(1336823..1337347) 1 NC_015581.1 PFAM: Peptidase A8, signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: tcx:Tcr_0496 lipoprotein signal peptidase; lipoprotein signal peptidase 1337347 10720005 Thicy_1175 Thioalkalimicrobium cyclicum ALM1 lipoprotein signal peptidase YP_004537421.1 1336823 R 717773 CDS YP_004537422.1 334144266 10720006 complement(1337340..1340168) 1 NC_015581.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: tcx:Tcr_0495 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1340168 10720006 Thicy_1176 Thioalkalimicrobium cyclicum ALM1 isoleucyl-tRNA synthetase YP_004537422.1 1337340 R 717773 CDS YP_004537423.1 334144267 10720007 complement(1340168..1341133) 1 NC_015581.1 TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: tcx:Tcr_0494 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 1341133 10720007 Thicy_1177 Thioalkalimicrobium cyclicum ALM1 riboflavin biosynthesis protein RibF YP_004537423.1 1340168 R 717773 CDS YP_004537424.1 334144268 10720008 complement(1341212..1342786) 1 NC_015581.1 KEGG: tcx:Tcr_0493 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN 1342786 10720008 Thicy_1178 Thioalkalimicrobium cyclicum ALM1 integral membrane protein MviN YP_004537424.1 1341212 R 717773 CDS YP_004537425.1 334144269 10720009 1342963..1344594 1 NC_015581.1 KEGG: tkm:TK90_0036 thiamine pyrophosphate protein TPP binding domain protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; acetolactate synthase 1344594 10720009 Thicy_1179 Thioalkalimicrobium cyclicum ALM1 acetolactate synthase YP_004537425.1 1342963 D 717773 CDS YP_004537426.1 334144270 10720010 complement(1344615..1346387) 1 NC_015581.1 KEGG: tcx:Tcr_0391 TPR repeat-containing protein; hypothetical protein 1346387 10720010 Thicy_1180 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537426.1 1344615 R 717773 CDS YP_004537427.1 334144271 10720011 complement(1346397..1348280) 1 NC_015581.1 SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA topoisomerase IV, subunit B, Gram-negative; KEGG: tcx:Tcr_0364 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA topoisomerase IV subunit B 1348280 10720011 Thicy_1181 Thioalkalimicrobium cyclicum ALM1 DNA topoisomerase IV subunit B YP_004537427.1 1346397 R 717773 CDS YP_004537428.1 334144272 10720012 1348412..1349059 1 NC_015581.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: reh:H16_A2802 pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 1349059 10720012 Thicy_1182 Thioalkalimicrobium cyclicum ALM1 pyridoxine/pyridoxamine 5'-phosphate oxidase YP_004537428.1 1348412 D 717773 CDS YP_004537429.1 334144273 10720013 1349040..1349768 1 NC_015581.1 TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: hna:Hneap_2154 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; Uracil-DNA glycosylase 1349768 10720013 Thicy_1183 Thioalkalimicrobium cyclicum ALM1 Uracil-DNA glycosylase YP_004537429.1 1349040 D 717773 CDS YP_004537430.1 334144274 10720014 complement(1349783..1350502) 1 NC_015581.1 KEGG: tcx:Tcr_0357 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1350502 10720014 Thicy_1184 Thioalkalimicrobium cyclicum ALM1 phospholipid/glycerol acyltransferase YP_004537430.1 1349783 R 717773 CDS YP_004537431.1 334144275 10720015 complement(1350499..1351074) 1 NC_015581.1 KEGG: tcx:Tcr_0356 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase family protein 1351074 10720015 Thicy_1185 Thioalkalimicrobium cyclicum ALM1 histidinol-phosphate phosphatase family protein YP_004537431.1 1350499 R 717773 CDS YP_004537432.1 334144276 10720016 complement(1351074..1353149) 1 NC_015581.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: tcx:Tcr_0355 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1353149 10720016 Thicy_1186 Thioalkalimicrobium cyclicum ALM1 glycyl-tRNA synthetase subunit beta YP_004537432.1 1351074 R 717773 CDS YP_004537433.1 334144277 10720017 complement(1353149..1354087) 1 NC_015581.1 PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: tcx:Tcr_0354 glycyl-tRNA synthetase subunit alpha; glycyl-tRNA synthetase subunit alpha 1354087 10720017 Thicy_1187 Thioalkalimicrobium cyclicum ALM1 glycyl-tRNA synthetase subunit alpha YP_004537433.1 1353149 R 717773 CDS YP_004537434.1 334144278 10720018 1354225..1354488 1 NC_015581.1 PFAM: SirA-like; KEGG: tcx:Tcr_0353 SirA-like; SirA-like domain-containing protein 1354488 10720018 Thicy_1188 Thioalkalimicrobium cyclicum ALM1 SirA-like domain-containing protein YP_004537434.1 1354225 D 717773 CDS YP_004537435.1 334144279 10720019 1354565..1355884 1 NC_015581.1 PFAM: Peptidase M23; KEGG: tcx:Tcr_0352 peptidase M23B; peptidase M23 1355884 10720019 Thicy_1189 Thioalkalimicrobium cyclicum ALM1 peptidase M23 YP_004537435.1 1354565 D 717773 CDS YP_004537436.1 334144280 10720020 1355897..1357003 1 NC_015581.1 KEGG: tcx:Tcr_0351 anhydro-N-acetylmuramic acid kinase; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; anhydro-N-acetylmuramic acid kinase 1357003 10720020 Thicy_1190 Thioalkalimicrobium cyclicum ALM1 anhydro-N-acetylmuramic acid kinase YP_004537436.1 1355897 D 717773 CDS YP_004537437.1 334144281 10720021 complement(1357140..1357826) 1 NC_015581.1 KEGG: tcx:Tcr_0466 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001; hypothetical protein 1357826 10720021 Thicy_1191 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537437.1 1357140 R 717773 CDS YP_004537438.1 334144282 10720022 complement(1358014..1358409) 1 NC_015581.1 PFAM: HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0460 ModE family transcriptional regulator; putative ModE family transcriptional regulator 1358409 10720022 Thicy_1192 Thioalkalimicrobium cyclicum ALM1 putative ModE family transcriptional regulator YP_004537438.1 1358014 R 717773 CDS YP_004537439.1 334144283 10720023 1358829..1361105 1 NC_015581.1 KEGG: tcx:Tcr_0463 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; ATP-cone; Ribonucleotide reductase large subunit, N-terminal; ribonucleoside-diphosphate reductase subunit alpha 1361105 10720023 Thicy_1193 Thioalkalimicrobium cyclicum ALM1 ribonucleoside-diphosphate reductase subunit alpha YP_004537439.1 1358829 D 717773 CDS YP_004537440.1 334144284 10720024 1361124..1362257 1 NC_015581.1 PFAM: Ribonucleotide reductase; KEGG: tcx:Tcr_1763 ribonucleotide-diphosphate reductase subunit beta; ribonucleotide reductase 1362257 10720024 Thicy_1194 Thioalkalimicrobium cyclicum ALM1 ribonucleotide reductase YP_004537440.1 1361124 D 717773 CDS YP_004537441.1 334144285 10720025 1362381..1362956 1 NC_015581.1 KEGG: tcx:Tcr_2156 sigma-24 (FecI-like); TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 factor 1362956 10720025 Thicy_1195 Thioalkalimicrobium cyclicum ALM1 ECF subfamily RNA polymerase sigma-24 factor YP_004537441.1 1362381 D 717773 CDS YP_004537442.1 334144286 10720026 1362953..1363639 1 NC_015581.1 KEGG: tcx:Tcr_2155 hypothetical protein; hypothetical protein 1363639 10720026 Thicy_1196 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537442.1 1362953 D 717773 CDS YP_004537443.1 334144287 10720027 1363767..1364210 1 NC_015581.1 KEGG: tkm:TK90_0691 domain of unknown function DUF1791; hypothetical protein 1364210 10720027 Thicy_1197 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537443.1 1363767 D 717773 CDS YP_004537444.1 334144288 10720028 complement(1364207..1364575) 1 NC_015581.1 PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: ftn:FTN_0384 hypothetical protein; thiol-disulfide oxidoreductase DCC 1364575 10720028 Thicy_1198 Thioalkalimicrobium cyclicum ALM1 thiol-disulfide oxidoreductase DCC YP_004537444.1 1364207 R 717773 CDS YP_004537445.1 334144289 10720030 complement(1364947..1365447) 1 NC_015581.1 PFAM: Protein of unknown function DUF336; KEGG: tcx:Tcr_1731 hypothetical protein; hypothetical protein 1365447 10720030 Thicy_1199 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537445.1 1364947 R 717773 CDS YP_004537446.1 334144290 10720031 1365551..1366462 1 NC_015581.1 KEGG: hhe:HH0856 membrane protease subunits; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 1366462 10720031 Thicy_1200 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537446.1 1365551 D 717773 CDS YP_004537447.1 334144291 10720032 1366459..1366899 1 NC_015581.1 PFAM: Nodulation efficiency, NfeD; KEGG: abu:Abu_1086 hypothetical protein; hypothetical protein 1366899 10720032 Thicy_1201 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537447.1 1366459 D 717773 CDS YP_004537448.1 334144292 10720033 1366896..1368071 1 NC_015581.1 KEGG: alv:Alvin_2486 hypothetical protein; PFAM: Protein of unknown function DUF399; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; hypothetical protein 1368071 10720033 Thicy_1202 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537448.1 1366896 D 717773 CDS YP_004537449.1 334144293 10720034 complement(1368058..1369890) 1 NC_015581.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: tgr:Tgr7_2661 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 1369890 10720034 Thicy_1203 Thioalkalimicrobium cyclicum ALM1 NADH/ubiquinone/plastoquinone YP_004537449.1 1368058 R 717773 CDS YP_004537450.1 334144294 10720035 complement(1369919..1371295) 1 NC_015581.1 KEGG: tcx:Tcr_0100 hypothetical protein; hypothetical protein 1371295 10720035 Thicy_1204 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537450.1 1369919 R 717773 CDS YP_004537451.1 334144295 10720036 complement(1371289..1373118) 1 NC_015581.1 KEGG: tcx:Tcr_0099 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A 1373118 10720036 Thicy_1205 Thioalkalimicrobium cyclicum ALM1 von Willebrand factor type A YP_004537451.1 1371289 R 717773 CDS YP_004537452.1 334144296 10720037 complement(1373115..1374200) 1 NC_015581.1 KEGG: tcx:Tcr_0098 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A 1374200 10720037 Thicy_1206 Thioalkalimicrobium cyclicum ALM1 von Willebrand factor type A YP_004537452.1 1373115 R 717773 CDS YP_004537453.1 334144297 10720038 complement(1374193..1374723) 1 NC_015581.1 hypothetical protein 1374723 10720038 Thicy_1207 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537453.1 1374193 R 717773 CDS YP_004537454.1 334144298 10720039 complement(1374720..1375637) 1 NC_015581.1 PFAM: Protein of unknown function DUF58; KEGG: tcx:Tcr_0096 hypothetical protein; hypothetical protein 1375637 10720039 Thicy_1208 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537454.1 1374720 R 717773 CDS YP_004537455.1 334144299 10720040 complement(1375634..1376620) 1 NC_015581.1 KEGG: tcx:Tcr_0095 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; ATPase 1376620 10720040 Thicy_1209 Thioalkalimicrobium cyclicum ALM1 ATPase YP_004537455.1 1375634 R 717773 CDS YP_004537456.1 334144300 10720041 1376688..1376795 1 NC_015581.1 hypothetical protein 1376795 10720041 Thicy_1210 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537456.1 1376688 D 717773 CDS YP_004537457.1 334144301 10720042 complement(1376826..1378322) 1 NC_015581.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: pag:PLES_43781 hypothetical protein; lipopolysaccharide biosynthesis protein 1378322 10720042 Thicy_1211 Thioalkalimicrobium cyclicum ALM1 lipopolysaccharide biosynthesis protein YP_004537457.1 1376826 R 717773 CDS YP_004537458.1 334144302 10720043 complement(1378319..1378546) 1 NC_015581.1 hypothetical protein 1378546 10720043 Thicy_1212 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537458.1 1378319 R 717773 CDS YP_004537459.1 334144303 10720044 1378654..1378893 1 NC_015581.1 manually curated; PFAM: Helix-turn-helix type 3; KEGG: abb:ABBFA_000236 helix-turn-helix family protein; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1378893 10720044 Thicy_1213 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004537459.1 1378654 D 717773 CDS YP_004537460.1 334144304 10720045 1379020..1380414 1 NC_015581.1 KEGG: tcx:Tcr_0948 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1380414 10720045 Thicy_1214 Thioalkalimicrobium cyclicum ALM1 DEAD/DEAH box helicase domain-containing protein YP_004537460.1 1379020 D 717773 CDS YP_004537461.1 334144305 10720046 complement(1380470..1393015) 1 NC_015581.1 KEGG: rba:RB3527 heme/hemopexin utilization protein HuxA; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; filamentous hemagglutinin family outer membrane protein 1393015 10720046 Thicy_1215 Thioalkalimicrobium cyclicum ALM1 filamentous hemagglutinin family outer membrane protein YP_004537461.1 1380470 R 717773 CDS YP_004537462.1 334144306 10720047 complement(1393038..1394831) 1 NC_015581.1 PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type 1394831 10720047 Thicy_1216 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein ShlB-type YP_004537462.1 1393038 R 717773 CDS YP_004537463.1 334144307 10720048 1395061..1396062 1 NC_015581.1 SMART: Helix-turn-helix, AraC domain; KEGG: amr:AM1_G0083 AraC family transcriptional regulator; AraC family transcriptional regulator 1396062 10720048 Thicy_1217 Thioalkalimicrobium cyclicum ALM1 AraC family transcriptional regulator YP_004537463.1 1395061 D 717773 CDS YP_004537464.1 334144308 10720049 complement(1396152..1397063) 1 NC_015581.1 KEGG: tcx:Tcr_0091 hypothetical protein; hypothetical protein 1397063 10720049 Thicy_1218 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537464.1 1396152 R 717773 CDS YP_004537465.1 334144309 10720050 complement(1397109..1398401) 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0094 major facilitator transporter; major facilitator superfamily protein 1398401 10720050 Thicy_1219 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004537465.1 1397109 R 717773 CDS YP_004537466.1 334144310 10720051 1398493..1399233 1 NC_015581.1 KEGG: tcx:Tcr_0093 beta-lactamase-like; beta-lactamase-like protein 1399233 10720051 Thicy_1220 Thioalkalimicrobium cyclicum ALM1 beta-lactamase-like protein YP_004537466.1 1398493 D 717773 CDS YP_004537467.1 334144311 10720052 1399253..1399897 1 NC_015581.1 KEGG: tcx:Tcr_2101 ArsR family transcriptional regulator; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: Rhodanese-like; HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 1399897 10720052 Thicy_1221 Thioalkalimicrobium cyclicum ALM1 ArsR family transcriptional regulator YP_004537467.1 1399253 D 717773 CDS YP_004537468.1 334144312 10720053 1399887..1400759 1 NC_015581.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: tcx:Tcr_2057 fructosamine kinase; fructosamine/Ketosamine-3-kinase 1400759 10720053 Thicy_1222 Thioalkalimicrobium cyclicum ALM1 fructosamine/Ketosamine-3-kinase YP_004537468.1 1399887 D 717773 CDS YP_004537469.1 334144313 10720054 complement(1400776..1401915) 1 NC_015581.1 KEGG: sse:Ssed_2262 glucose dehydrogenase; glucose dehydrogenase 1401915 10720054 Thicy_1223 Thioalkalimicrobium cyclicum ALM1 glucose dehydrogenase YP_004537469.1 1400776 R 717773 CDS YP_004537470.1 334144314 10720055 complement(1401932..1403473) 1 NC_015581.1 KEGG: alv:Alvin_1406 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 1403473 10720055 Thicy_1224 Thioalkalimicrobium cyclicum ALM1 NADH dehydrogenase (quinone) YP_004537470.1 1401932 R 717773 CDS YP_004537471.1 334144315 10720056 complement(1403470..1404945) 1 NC_015581.1 KEGG: tgr:Tgr7_2663 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 1404945 10720056 Thicy_1225 Thioalkalimicrobium cyclicum ALM1 NADH dehydrogenase (quinone) YP_004537471.1 1403470 R 717773 CDS YP_004537472.1 334144316 10720057 complement(1404942..1405244) 1 NC_015581.1 PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: tgr:Tgr7_2664 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 1405244 10720057 Thicy_1226 Thioalkalimicrobium cyclicum ALM1 NADH-ubiquinone oxidoreductase chain 4L YP_004537472.1 1404942 R 717773 CDS YP_004537473.1 334144317 10720058 complement(1405237..1406163) 1 NC_015581.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: tkm:TK90_1003 Na+/H+ antiporter MnhB subunit-related protein; Na+/H+ antiporter MnhB subunit-like protein 1406163 10720058 Thicy_1227 Thioalkalimicrobium cyclicum ALM1 Na+/H+ antiporter MnhB subunit-like protein YP_004537473.1 1405237 R 717773 CDS YP_004537474.1 334144318 10720059 complement(1406150..1406464) 1 NC_015581.1 PFAM: Na+/H+ antiporter subunit; KEGG: tgr:Tgr7_2667 putative monovalent cation/H+ antiporter subunit G; Na+/H+ antiporter subunit 1406464 10720059 Thicy_1228 Thioalkalimicrobium cyclicum ALM1 Na+/H+ antiporter subunit YP_004537474.1 1406150 R 717773 CDS YP_004537475.1 334144319 10720060 complement(1406451..1406753) 1 NC_015581.1 PFAM: Multiple resistance and pH regulation protein F; KEGG: rpx:Rpdx1_3201 hypothetical protein; multiple resistance and pH regulation protein F 1406753 10720060 Thicy_1229 Thioalkalimicrobium cyclicum ALM1 multiple resistance and pH regulation protein F YP_004537475.1 1406451 R 717773 CDS YP_004537476.1 334144320 10720061 complement(1406750..1407247) 1 NC_015581.1 KEGG: tra:Trad_1678 multisubunit sodium/proton antiporter subunit MrpE; multisubunit sodium/proton antiporter subunit MrpE 1407247 10720061 Thicy_1230 Thioalkalimicrobium cyclicum ALM1 multisubunit sodium/proton antiporter subunit MrpE YP_004537476.1 1406750 R 717773 CDS YP_004537477.1 334144321 10720062 complement(1407265..1408134) 1 NC_015581.1 PFAM: Protein of unknown function DUF519; KEGG: tcx:Tcr_1053 hypothetical protein; hypothetical protein 1408134 10720062 Thicy_1231 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537477.1 1407265 R 717773 CDS YP_004537478.1 334144322 10720063 1408273..1409841 1 NC_015581.1 PFAM: Phosphate transporter; KEGG: tcx:Tcr_0543 phosphate transporter; phosphate transporter 1409841 10720063 Thicy_1232 Thioalkalimicrobium cyclicum ALM1 phosphate transporter YP_004537478.1 1408273 D 717773 CDS YP_004537479.1 334144323 10720064 1410246..1411514 1 NC_015581.1 KEGG: tcx:Tcr_1488 PfkB; PFAM: Carbohydrate/purine kinase; Rieske [2Fe-2S] iron-sulphur domain; Ketohexokinase 1411514 10720064 Thicy_1233 Thioalkalimicrobium cyclicum ALM1 Ketohexokinase YP_004537479.1 1410246 D 717773 CDS YP_004537480.1 334144324 10720065 complement(1411523..1412254) 1 NC_015581.1 KEGG: tcx:Tcr_1489 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase 1412254 10720065 Thicy_1234 Thioalkalimicrobium cyclicum ALM1 TrmH family RNA methyltransferase YP_004537480.1 1411523 R 717773 CDS YP_004537481.1 334144325 10720066 complement(1412244..1414607) 1 NC_015581.1 SMART: Cold shock protein; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; KEGG: tcx:Tcr_1490 ribonuclease R; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; ribonuclease R 1414607 10720066 Thicy_1235 Thioalkalimicrobium cyclicum ALM1 ribonuclease R YP_004537481.1 1412244 R 717773 CDS YP_004537482.1 334144326 10720067 complement(1414668..1416056) 1 NC_015581.1 KEGG: tcx:Tcr_1491 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase 1416056 10720067 Thicy_1236 Thioalkalimicrobium cyclicum ALM1 dihydrolipoyl dehydrogenase YP_004537482.1 1414668 R 717773 CDS YP_004537483.1 334144327 10720068 1416146..1417678 1 NC_015581.1 KEGG: tcx:Tcr_1492 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase-like, catalytic; Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; lytic transglycosylase catalytic subunit 1417678 10720068 Thicy_1237 Thioalkalimicrobium cyclicum ALM1 lytic transglycosylase catalytic subunit YP_004537483.1 1416146 D 717773 CDS YP_004537484.1 334144328 10720069 1417760..1418734 1 NC_015581.1 HAMAP: Fructose-1,6-bisphosphatase; KEGG: tcx:Tcr_1495 inositol phosphatase/fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 1418734 10720069 Thicy_1238 Thioalkalimicrobium cyclicum ALM1 fructose-1,6-bisphosphatase class 1 YP_004537484.1 1417760 D 717773 CDS YP_004537485.1 334144329 10720070 1418823..1419347 1 NC_015581.1 HAMAP: Inorganic pyrophosphatase; KEGG: tcx:Tcr_1496 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 1419347 10720070 Thicy_1239 Thioalkalimicrobium cyclicum ALM1 inorganic pyrophosphatase YP_004537485.1 1418823 D 717773 CDS YP_004537486.1 334144330 10720071 1419476..1422283 1 NC_015581.1 HAMAP: Phosphoenolpyruvate carboxylase; KEGG: tcx:Tcr_1521 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1422283 10720071 Thicy_1240 Thioalkalimicrobium cyclicum ALM1 phosphoenolpyruvate carboxylase YP_004537486.1 1419476 D 717773 CDS YP_004537487.1 334144331 10720072 1422381..1422767 1 NC_015581.1 PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: tcx:Tcr_1522 aspartate alpha-decarboxylase; aspartate 1-decarboxylase 1422767 10720072 Thicy_1241 Thioalkalimicrobium cyclicum ALM1 aspartate 1-decarboxylase YP_004537487.1 1422381 D 717773 CDS YP_004537488.1 334144332 10720073 complement(1422774..1423646) 1 NC_015581.1 TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: tcx:Tcr_1525 pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase 1423646 10720073 Thicy_1242 Thioalkalimicrobium cyclicum ALM1 pantothenate synthetase YP_004537488.1 1422774 R 717773 CDS YP_004537489.1 334144333 10720074 complement(1423646..1424437) 1 NC_015581.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: tcx:Tcr_1526 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1424437 10720074 Thicy_1243 Thioalkalimicrobium cyclicum ALM1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004537489.1 1423646 R 717773 CDS YP_004537490.1 334144334 10720075 complement(1424434..1424982) 1 NC_015581.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: tcx:Tcr_1527 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1424982 10720075 Thicy_1244 Thioalkalimicrobium cyclicum ALM1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004537490.1 1424434 R 717773 CDS YP_004537491.1 334144335 10720076 complement(1424975..1426384) 1 NC_015581.1 TIGRFAM: Poly(A) polymerase, PcnB; KEGG: tcx:Tcr_1528 poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 1426384 10720076 Thicy_1245 Thioalkalimicrobium cyclicum ALM1 poly(A) polymerase YP_004537491.1 1424975 R 717773 CDS YP_004537492.1 334144336 10720077 1426533..1426949 1 NC_015581.1 PFAM: Fe-S metabolism associated SufE; KEGG: tcx:Tcr_1625 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1426949 10720077 Thicy_1246 Thioalkalimicrobium cyclicum ALM1 Fe-S metabolism associated SufE YP_004537492.1 1426533 D 717773 CDS YP_004537493.1 334144337 10720078 complement(1427038..1427937) 1 NC_015581.1 HAMAP: protease htpX; KEGG: tcx:Tcr_1626 heat shock protein HtpX; protease htpX 1427937 10720078 Thicy_1247 Thioalkalimicrobium cyclicum ALM1 protease htpX YP_004537493.1 1427038 R 717773 CDS YP_004537494.1 334144338 10720079 complement(1428038..1429471) 1 NC_015581.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: tcx:Tcr_1627 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 1429471 10720079 Thicy_1248 Thioalkalimicrobium cyclicum ALM1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B YP_004537494.1 1428038 R 717773 CDS YP_004537495.1 334144339 10720080 complement(1429468..1430934) 1 NC_015581.1 PFAM: Amidase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: tcx:Tcr_1628 glutamyl-tRNA(Gln) amidotransferase, A subunit; glutamyl-tRNA(Gln) amidotransferase subunit A 1430934 10720080 Thicy_1249 Thioalkalimicrobium cyclicum ALM1 glutamyl-tRNA(Gln) amidotransferase subunit A YP_004537495.1 1429468 R 717773 CDS YP_004537496.1 334144340 10720081 complement(1430964..1431251) 1 NC_015581.1 TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: tcx:Tcr_1629 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 1431251 10720081 Thicy_1250 Thioalkalimicrobium cyclicum ALM1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C YP_004537496.1 1430964 R 717773 CDS YP_004537497.1 334144341 10720082 1431434..1432474 1 NC_015581.1 KEGG: tcx:Tcr_1630 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 1432474 10720082 Thicy_1251 Thioalkalimicrobium cyclicum ALM1 MreB/Mrl family cell shape determining protein YP_004537497.1 1431434 D 717773 CDS YP_004537498.1 334144342 10720083 1432592..1433341 1 NC_015581.1 PFAM: Rod shape-determining protein MreC; KEGG: tcx:Tcr_1631 rod shape-determining protein MreC; Rod shape-determining protein MreC 1433341 10720083 Thicy_1252 Thioalkalimicrobium cyclicum ALM1 Rod shape-determining protein MreC YP_004537498.1 1432592 D 717773 CDS YP_004537499.1 334144343 10720084 1433338..1433841 1 NC_015581.1 TIGRFAM: Cell shape-determining protein MreD; KEGG: tcx:Tcr_1632 hypothetical protein; rod shape-determining protein MreD 1433841 10720084 Thicy_1253 Thioalkalimicrobium cyclicum ALM1 rod shape-determining protein MreD YP_004537499.1 1433338 D 717773 CDS YP_004537500.1 334144344 10720085 1433887..1435686 1 NC_015581.1 TIGRFAM: Penicillin-binding protein 2; KEGG: tcx:Tcr_1633 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 1435686 10720085 Thicy_1254 Thioalkalimicrobium cyclicum ALM1 penicillin-binding protein 2 YP_004537500.1 1433887 D 717773 CDS YP_004537501.1 334144345 10720086 1435683..1436837 1 NC_015581.1 KEGG: tcx:Tcr_1634 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA 1436837 10720086 Thicy_1255 Thioalkalimicrobium cyclicum ALM1 rod shape-determining protein RodA YP_004537501.1 1435683 D 717773 CDS YP_004537502.1 334144346 10720087 1436915..1438087 1 NC_015581.1 KEGG: tcx:Tcr_1635 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; beta-lactamase 1438087 10720087 Thicy_1256 Thioalkalimicrobium cyclicum ALM1 beta-lactamase YP_004537502.1 1436915 D 717773 CDS YP_004537503.1 334144347 10720088 1438087..1438986 1 NC_015581.1 KEGG: tcx:Tcr_1636 aminotransferase, class IV; PFAM: Aminotransferase, class IV; D-amino-acid transaminase 1438986 10720088 Thicy_1257 Thioalkalimicrobium cyclicum ALM1 D-amino-acid transaminase YP_004537503.1 1438087 D 717773 CDS YP_004537504.1 334144348 10720089 1438997..1439293 1 NC_015581.1 KEGG: tcx:Tcr_1637 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493; hypothetical protein 1439293 10720089 Thicy_1258 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537504.1 1438997 D 717773 CDS YP_004537505.1 334144349 10720090 1439281..1439946 1 NC_015581.1 KEGG: tcx:Tcr_1638 lipoate-protein ligase B; manually curated; TIGRFAM: Octanoyltransferase; PFAM: Biotin/lipoate A/B protein ligase; HAMAP: Octanoyltransferase; Octanoyltransferase 1439946 10720090 Thicy_1259 Thioalkalimicrobium cyclicum ALM1 Octanoyltransferase YP_004537505.1 1439281 D 717773 CDS YP_004537506.1 334144350 10720091 1439974..1440963 1 NC_015581.1 KEGG: tcx:Tcr_1639 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB; lipoyl synthase 1440963 10720091 Thicy_1260 Thioalkalimicrobium cyclicum ALM1 lipoyl synthase YP_004537506.1 1439974 D 717773 CDS YP_004537507.1 334144351 10720092 1440963..1441808 1 NC_015581.1 PFAM: Heat shock protein Hsp33 protein; KEGG: tcx:Tcr_1649 HSP33 protein; Hsp33 protein 1441808 10720092 Thicy_1261 Thioalkalimicrobium cyclicum ALM1 Hsp33 protein YP_004537507.1 1440963 D 717773 CDS YP_004537508.1 334144352 10720093 complement(1441829..1442605) 1 NC_015581.1 KEGG: tcx:Tcr_1650 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328; hypothetical protein 1442605 10720093 Thicy_1262 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537508.1 1441829 R 717773 CDS YP_004537509.1 334144353 10720094 complement(1442609..1442875) 1 NC_015581.1 KEGG: tcx:Tcr_1651 hypothetical protein; hypothetical protein 1442875 10720094 Thicy_1263 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537509.1 1442609 R 717773 CDS YP_004537510.1 334144354 10720095 complement(1442981..1443667) 1 NC_015581.1 PFAM: Nucleotidyl transferase; KEGG: tcx:Tcr_1652 nucleotidyl transferase; nucleotidyl transferase 1443667 10720095 Thicy_1264 Thioalkalimicrobium cyclicum ALM1 nucleotidyl transferase YP_004537510.1 1442981 R 717773 CDS YP_004537511.1 334144355 10720096 complement(1443655..1444770) 1 NC_015581.1 PFAM: Aminoglycoside phosphotransferase; KEGG: tcx:Tcr_1653 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1444770 10720096 Thicy_1265 Thioalkalimicrobium cyclicum ALM1 aminoglycoside phosphotransferase YP_004537511.1 1443655 R 717773 CDS YP_004537512.1 334144356 10720097 1444869..1447244 1 NC_015581.1 PFAM: Organic solvent tolerance protein; KEGG: tcx:Tcr_1654 organic solvent tolerance protein; organic solvent tolerance protein 1447244 10720097 Thicy_1266 Thioalkalimicrobium cyclicum ALM1 organic solvent tolerance protein YP_004537512.1 1444869 D 717773 CDS YP_004537513.1 334144357 10720098 1447255..1448235 1 NC_015581.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: tcx:Tcr_1655 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1448235 10720098 Thicy_1267 Thioalkalimicrobium cyclicum ALM1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004537513.1 1447255 D 717773 CDS YP_004537514.1 334144358 10720099 1448244..1449245 1 NC_015581.1 PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: pmr:PMI2333 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 1449245 10720099 Thicy_1268 Thioalkalimicrobium cyclicum ALM1 4-hydroxythreonine-4-phosphate dehydrogenase YP_004537514.1 1448244 D 717773 CDS YP_004537515.1 334144359 10720100 1449232..1450080 1 NC_015581.1 SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: tcx:Tcr_1657 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; ribosomal RNA small subunit methyltransferase A 1450080 10720100 Thicy_1269 Thioalkalimicrobium cyclicum ALM1 ribosomal RNA small subunit methyltransferase A YP_004537515.1 1449232 D 717773 CDS YP_004537516.1 334144360 10720101 1450085..1450936 1 NC_015581.1 TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: tcx:Tcr_1658 diadenosine tetraphosphatase; PFAM: Metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1450936 10720101 Thicy_1270 Thioalkalimicrobium cyclicum ALM1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_004537516.1 1450085 D 717773 CDS YP_004537517.1 334144361 10720102 complement(1451017..1451397) 1 NC_015581.1 KEGG: tkm:TK90_0540 hypothetical protein; hypothetical protein 1451397 10720102 Thicy_1271 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537517.1 1451017 R 717773 CDS YP_004537518.1 334144362 10720103 complement(1451527..1451826) 1 NC_015581.1 PFAM: BolA-like protein; KEGG: tcx:Tcr_0548 BolA-like protein; BolA family protein 1451826 10720103 Thicy_1272 Thioalkalimicrobium cyclicum ALM1 BolA family protein YP_004537518.1 1451527 R 717773 CDS YP_004537519.1 334144363 10720104 1451922..1452173 1 NC_015581.1 PFAM: Ferredoxin; KEGG: tcx:Tcr_0545 ferredoxin; ferredoxin 1452173 10720104 Thicy_1273 Thioalkalimicrobium cyclicum ALM1 ferredoxin YP_004537519.1 1451922 D 717773 CDS YP_004537520.1 334144364 10720108 1454437..1455843 1 NC_015581.1 KEGG: tcx:Tcr_0536 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; type I glutamine synthetase 1455843 10720108 Thicy_1277 Thioalkalimicrobium cyclicum ALM1 type I glutamine synthetase YP_004537520.1 1454437 D 717773 CDS YP_004537521.1 334144365 10720109 complement(1455980..1457512) 1 NC_015581.1 TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: tcx:Tcr_0477 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1457512 10720109 Thicy_1278 Thioalkalimicrobium cyclicum ALM1 apolipoprotein N-acyltransferase YP_004537521.1 1455980 R 717773 CDS YP_004537522.1 334144366 10720110 complement(1457499..1458377) 1 NC_015581.1 PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: tcx:Tcr_0476 transporter-associated region; CBS domain-containing protein 1458377 10720110 Thicy_1279 Thioalkalimicrobium cyclicum ALM1 CBS domain-containing protein YP_004537522.1 1457499 R 717773 CDS YP_004537523.1 334144367 10720111 complement(1458468..1458983) 1 NC_015581.1 TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: esa:ESA_02677 putative metalloprotease; PFAM: Uncharacterised protein family UPF0054; metalloprotease ybeY 1458983 10720111 Thicy_1280 Thioalkalimicrobium cyclicum ALM1 metalloprotease ybeY YP_004537523.1 1458468 R 717773 CDS YP_004537524.1 334144368 10720112 complement(1459005..1459994) 1 NC_015581.1 PFAM: PhoH-like protein; KEGG: tcx:Tcr_0474 PhoH-like protein; PhoH family protein 1459994 10720112 Thicy_1281 Thioalkalimicrobium cyclicum ALM1 PhoH family protein YP_004537524.1 1459005 R 717773 CDS YP_004537525.1 334144369 10720113 complement(1460001..1461440) 1 NC_015581.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; KEGG: tcx:Tcr_0473 tRNA-i(6)A37 modification enzyme MiaB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 1461440 10720113 Thicy_1282 Thioalkalimicrobium cyclicum ALM1 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB YP_004537525.1 1460001 R 717773 CDS YP_004537526.1 334144370 10720114 complement(1461532..1463943) 1 NC_015581.1 TIGRFAM: Phosphoenolpyruvate synthase; KEGG: tcx:Tcr_1186 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; phosphoenolpyruvate synthase 1463943 10720114 Thicy_1283 Thioalkalimicrobium cyclicum ALM1 phosphoenolpyruvate synthase YP_004537526.1 1461532 R 717773 CDS YP_004537527.1 334144371 10720115 complement(1463964..1465184) 1 NC_015581.1 PFAM: Mechanosensitive ion channel MscS; KEGG: cts:Ctha_0865 mechanosensitive ion channel MscS; mechanosensitive ion channel MscS 1465184 10720115 Thicy_1284 Thioalkalimicrobium cyclicum ALM1 mechanosensitive ion channel MscS YP_004537527.1 1463964 R 717773 CDS YP_004537528.1 334144372 10720116 complement(1465231..1465863) 1 NC_015581.1 PFAM: Protein of unknown function DUF45; KEGG: aac:Aaci_1763 protein of unknown function DUF45; hypothetical protein 1465863 10720116 Thicy_1285 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537528.1 1465231 R 717773 CDS YP_004537529.1 334144373 10720117 complement(1465863..1466384) 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_0784 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1466384 10720117 Thicy_1286 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004537529.1 1465863 R 717773 CDS YP_004537530.1 334144374 10720118 1466652..1466924 1 NC_015581.1 KEGG: efa:EF1550 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 1466924 10720118 Thicy_1287 Thioalkalimicrobium cyclicum ALM1 histone family protein DNA-binding protein YP_004537530.1 1466652 D 717773 CDS YP_004537531.1 334144375 10720119 complement(1466982..1467449) 1 NC_015581.1 KEGG: ilo:IL0121 hypothetical protein; hypothetical protein 1467449 10720119 Thicy_1288 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537531.1 1466982 R 717773 CDS YP_004537532.1 334144376 10720120 complement(1467446..1467928) 1 NC_015581.1 KEGG: apb:SAR116_0799 DNA photolyase light harvesting cofactor binding domain-containing protein; hypothetical protein 1467928 10720120 Thicy_1289 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537532.1 1467446 R 717773 CDS YP_004537533.1 334144377 10720121 complement(1467928..1468761) 1 NC_015581.1 PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: apb:SAR116_0797 hypothetical protein; DNA photolyase FAD-binding protein 1468761 10720121 Thicy_1290 Thioalkalimicrobium cyclicum ALM1 DNA photolyase FAD-binding protein YP_004537533.1 1467928 R 717773 CDS YP_004537534.1 334144378 10720122 complement(1468761..1469264) 1 NC_015581.1 PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: rde:RD1_4107 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 1469264 10720122 Thicy_1291 Thioalkalimicrobium cyclicum ALM1 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_004537534.1 1468761 R 717773 CDS YP_004537535.1 334144379 10720123 complement(1469286..1470065) 1 NC_015581.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: mrd:Mrad2831_5782 short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD 1470065 10720123 Thicy_1292 Thioalkalimicrobium cyclicum ALM1 polysaccharide biosynthesis protein CapD YP_004537535.1 1469286 R 717773 CDS YP_004537536.1 334144380 10720124 complement(1470093..1470362) 1 NC_015581.1 TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: ilo:IL2050 hypothetical protein; hypothetical protein 1470362 10720124 Thicy_1293 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537536.1 1470093 R 717773 CDS YP_004537537.1 334144381 10720125 1470507..1471844 1 NC_015581.1 PFAM: ABC-1; KEGG: sfr:Sfri_0889 hypothetical protein; ABC transporter 1471844 10720125 Thicy_1294 Thioalkalimicrobium cyclicum ALM1 ABC transporter YP_004537537.1 1470507 D 717773 CDS YP_004537538.1 334144382 10720126 1471931..1472341 1 NC_015581.1 hypothetical protein 1472341 10720126 Thicy_1295 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537538.1 1471931 D 717773 CDS YP_004537539.1 334144383 10720127 1472360..1473058 1 NC_015581.1 TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: hel:HELO_4303 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1473058 10720127 Thicy_1296 Thioalkalimicrobium cyclicum ALM1 thiamine-phosphate pyrophosphorylase YP_004537539.1 1472360 D 717773 CDS YP_004537540.1 334144384 10720128 1473055..1473888 1 NC_015581.1 TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: gau:GAU_3709 thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1473888 10720128 Thicy_1297 Thioalkalimicrobium cyclicum ALM1 phosphomethylpyrimidine kinase YP_004537540.1 1473055 D 717773 CDS YP_004537541.1 334144385 10720129 1473958..1475208 1 NC_015581.1 KEGG: tcx:Tcr_0627 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; phosphoglycerate dehydrogenase 1475208 10720129 Thicy_1298 Thioalkalimicrobium cyclicum ALM1 phosphoglycerate dehydrogenase YP_004537541.1 1473958 D 717773 CDS YP_004537542.1 334144386 10720130 1475227..1478049 1 NC_015581.1 KEGG: tcx:Tcr_0626 hypothetical protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 1478049 10720130 Thicy_1299 Thioalkalimicrobium cyclicum ALM1 D-lactate dehydrogenase YP_004537542.1 1475227 D 717773 CDS YP_004537543.1 334144387 10720131 1478053..1478244 1 NC_015581.1 KEGG: maq:Maqu_2212 hypothetical protein; hypothetical protein 1478244 10720131 Thicy_1300 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537543.1 1478053 D 717773 CDS YP_004537544.1 334144388 10720132 1478472..1480538 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_2064 TonB-dependent receptor; TonB-dependent receptor 1480538 10720132 Thicy_1301 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004537544.1 1478472 D 717773 CDS YP_004537545.1 334144389 10720133 1480570..1480836 1 NC_015581.1 KEGG: sun:SUN_0533 hypothetical protein; hypothetical protein 1480836 10720133 Thicy_1302 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537545.1 1480570 D 717773 CDS YP_004537546.1 334144390 10720134 1480868..1481503 1 NC_015581.1 KEGG: tcx:Tcr_2066 nicotinamide mononucleotide transporter; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1481503 10720134 Thicy_1303 Thioalkalimicrobium cyclicum ALM1 nicotinamide mononucleotide transporter PnuC YP_004537546.1 1480868 D 717773 CDS YP_004537547.1 334144391 10720135 complement(1481500..1482369) 1 NC_015581.1 KEGG: tcx:Tcr_2067 hypothetical protein; hypothetical protein 1482369 10720135 Thicy_1304 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537547.1 1481500 R 717773 CDS YP_004537548.1 334144392 10720136 complement(1482399..1482605) 1 NC_015581.1 KEGG: tcx:Tcr_0535 hypothetical protein; hypothetical protein 1482605 10720136 Thicy_1305 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537548.1 1482399 R 717773 CDS YP_004537549.1 334144393 10720137 complement(1482624..1483553) 1 NC_015581.1 TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: tcx:Tcr_0534 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase 1483553 10720137 Thicy_1306 Thioalkalimicrobium cyclicum ALM1 branched-chain amino acid aminotransferase YP_004537549.1 1482624 R 717773 CDS YP_004537550.1 334144394 10720138 1483799..1484971 1 NC_015581.1 PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: tcx:Tcr_0533 acetylornithine and succinylornithine aminotransferase; acetylornithine/succinyldiaminopimelate aminotransferase 1484971 10720138 Thicy_1307 Thioalkalimicrobium cyclicum ALM1 acetylornithine/succinyldiaminopimelate aminotransferase YP_004537550.1 1483799 D 717773 CDS YP_004537551.1 334144395 10720139 1484979..1485890 1 NC_015581.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: tcx:Tcr_0532 ornithine carbamoyltransferase; ornithine carbamoyltransferase 1485890 10720139 Thicy_1308 Thioalkalimicrobium cyclicum ALM1 ornithine carbamoyltransferase YP_004537551.1 1484979 D 717773 CDS YP_004537552.1 334144396 10720140 complement(1485887..1486489) 1 NC_015581.1 SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: hel:HELO_2057 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR; Recombination protein recR 1486489 10720140 Thicy_1309 Thioalkalimicrobium cyclicum ALM1 Recombination protein recR YP_004537552.1 1485887 R 717773 CDS YP_004537553.1 334144397 10720141 complement(1486502..1486831) 1 NC_015581.1 TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: tcx:Tcr_0530 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein 1486831 10720141 Thicy_1310 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537553.1 1486502 R 717773 CDS YP_004537554.1 334144398 10720142 complement(1486857..1488755) 1 NC_015581.1 TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: tcx:Tcr_0529 DNA-directed DNA polymerase; SMART: ATPase, AAA+ type, core; DNA polymerase III subunits gamma and tau 1488755 10720142 Thicy_1311 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunits gamma and tau YP_004537554.1 1486857 R 717773 CDS YP_004537555.1 334144399 10720144 complement(1489083..1491581) 1 NC_015581.1 KEGG: tcx:Tcr_0513 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 1491581 10720144 Thicy_1312 Thioalkalimicrobium cyclicum ALM1 glycogen/starch/alpha-glucan phosphorylase YP_004537555.1 1489083 R 717773 CDS YP_004537556.1 334144400 10720145 complement(1491571..1493067) 1 NC_015581.1 PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: tcx:Tcr_0512 glycogen/starch synthase, ADP-glucose type; glycogen synthase 1493067 10720145 Thicy_1313 Thioalkalimicrobium cyclicum ALM1 glycogen synthase YP_004537556.1 1491571 R 717773 CDS YP_004537557.1 334144401 10720146 complement(1493073..1495265) 1 NC_015581.1 KEGG: tcx:Tcr_0511 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; 1,4-alpha-glucan-branching protein 1495265 10720146 Thicy_1314 Thioalkalimicrobium cyclicum ALM1 1,4-alpha-glucan-branching protein YP_004537557.1 1493073 R 717773 CDS YP_004537558.1 334144402 10720147 complement(1495280..1496611) 1 NC_015581.1 TIGRFAM: Glycoside hydrolase, family 77; KEGG: tcx:Tcr_0510 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1496611 10720147 Thicy_1315 Thioalkalimicrobium cyclicum ALM1 4-alpha-glucanotransferase YP_004537558.1 1495280 R 717773 CDS YP_004537559.1 334144403 10720148 complement(1496661..1498385) 1 NC_015581.1 KEGG: tcx:Tcr_0509 glycoside hydrolase family protein; manually curated; PFAM: Glycoside hydrolase, family 57, core; glycoside hydrolase family protein 1498385 10720148 Thicy_1316 Thioalkalimicrobium cyclicum ALM1 glycoside hydrolase family protein YP_004537559.1 1496661 R 717773 CDS YP_004537560.1 334144404 10720149 complement(1498410..1499675) 1 NC_015581.1 PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: tcx:Tcr_0508 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1499675 10720149 Thicy_1317 Thioalkalimicrobium cyclicum ALM1 glucose-1-phosphate adenylyltransferase YP_004537560.1 1498410 R 717773 CDS YP_004537561.1 334144405 10720150 complement(1499712..1500722) 1 NC_015581.1 KEGG: tcx:Tcr_0507 glucokinase; PFAM: Glucokinase; glucokinase 1500722 10720150 Thicy_1318 Thioalkalimicrobium cyclicum ALM1 glucokinase YP_004537561.1 1499712 R 717773 CDS YP_004537562.1 334144406 10720151 complement(1500770..1501336) 1 NC_015581.1 PFAM: Sugar isomerase (SIS); KEGG: tcx:Tcr_0506 phosphoheptose isomerase; sugar isomerase 1501336 10720151 Thicy_1319 Thioalkalimicrobium cyclicum ALM1 sugar isomerase YP_004537562.1 1500770 R 717773 CDS YP_004537563.1 334144407 10720152 complement(1501329..1502753) 1 NC_015581.1 TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; HAMAP: Bifunctional protein hldE; KEGG: tcx:Tcr_0505 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase; Bifunctional protein hldE 1502753 10720152 Thicy_1320 Thioalkalimicrobium cyclicum ALM1 Bifunctional protein hldE YP_004537563.1 1501329 R 717773 CDS YP_004537564.1 334144408 10720153 1502980..1503645 1 NC_015581.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: ppn:Palpr_1308 lipid a 3-O-deacylase-related protein; lipid A 3-O-deacylase-like protein 1503645 10720153 Thicy_1321 Thioalkalimicrobium cyclicum ALM1 lipid A 3-O-deacylase-like protein YP_004537564.1 1502980 D 717773 CDS YP_004537565.1 334144409 10720154 1503692..1504636 1 NC_015581.1 TIGRFAM: KpsF/GutQ; KEGG: tcx:Tcr_0503 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; KpsF/GutQ family protein 1504636 10720154 Thicy_1322 Thioalkalimicrobium cyclicum ALM1 KpsF/GutQ family protein YP_004537565.1 1503692 D 717773 CDS YP_004537566.1 334144410 10720155 1504620..1505981 1 NC_015581.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: tcx:Tcr_0502 three-deoxy-D-manno-octulosonic-acid transferase-like; tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1505981 10720155 Thicy_1323 Thioalkalimicrobium cyclicum ALM1 tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004537566.1 1504620 D 717773 CDS YP_004537567.1 334144411 10720156 1506045..1506899 1 NC_015581.1 KEGG: tcx:Tcr_0467 hypothetical protein; hypothetical protein 1506899 10720156 Thicy_1324 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537567.1 1506045 D 717773 CDS YP_004537568.1 334144412 10720157 1506893..1507825 1 NC_015581.1 KEGG: tcx:Tcr_0468 methylation site; hypothetical protein 1507825 10720157 Thicy_1325 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537568.1 1506893 D 717773 CDS YP_004537569.1 334144413 10720158 1507788..1508522 1 NC_015581.1 KEGG: sde:Sde_1351 hypothetical protein; hypothetical protein 1508522 10720158 Thicy_1326 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537569.1 1507788 D 717773 CDS YP_004537570.1 334144414 10720159 complement(1508511..1510202) 1 NC_015581.1 PFAM: L-lactate permease; KEGG: afl:Aflv_0347 L-lactate permease; L-lactate permease 1510202 10720159 Thicy_1327 Thioalkalimicrobium cyclicum ALM1 L-lactate permease YP_004537570.1 1508511 R 717773 CDS YP_004537571.1 334144415 10720160 1510337..1510837 1 NC_015581.1 TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: tcx:Tcr_1819 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1510837 10720160 Thicy_1328 Thioalkalimicrobium cyclicum ALM1 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004537571.1 1510337 D 717773 CDS YP_004537572.1 334144416 10720161 1510842..1511957 1 NC_015581.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: tcx:Tcr_1818 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit 1511957 10720161 Thicy_1329 Thioalkalimicrobium cyclicum ALM1 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004537572.1 1510842 D 717773 CDS YP_004537573.1 334144417 10720162 complement(1511973..1512527) 1 NC_015581.1 PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_0234 hypothetical protein; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1512527 10720162 Thicy_1330 Thioalkalimicrobium cyclicum ALM1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_004537573.1 1511973 R 717773 CDS YP_004537574.1 334144418 10720163 complement(1512562..1513530) 1 NC_015581.1 PFAM: Protein of unknown function DUF389; KEGG: dak:DaAHT2_2330 hypothetical protein; hypothetical protein 1513530 10720163 Thicy_1331 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537574.1 1512562 R 717773 CDS YP_004537575.1 334144419 10720164 1513947..1515104 1 NC_015581.1 PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: tcx:Tcr_1821 S-adenosylmethionine synthetase; S-adenosylmethionine synthase 1515104 10720164 Thicy_1332 Thioalkalimicrobium cyclicum ALM1 S-adenosylmethionine synthase YP_004537575.1 1513947 D 717773 CDS YP_004537576.1 334144420 10720165 1515239..1516108 1 NC_015581.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: tcx:Tcr_1822 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1516108 10720165 Thicy_1333 Thioalkalimicrobium cyclicum ALM1 5,10-methylenetetrahydrofolate reductase YP_004537576.1 1515239 D 717773 CDS YP_004537577.1 334144421 10720166 1516124..1516864 1 NC_015581.1 KEGG: tcx:Tcr_1823 hypothetical protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; Ribosomal RNA small subunit methyltransferase E 1516864 10720166 Thicy_1334 Thioalkalimicrobium cyclicum ALM1 Ribosomal RNA small subunit methyltransferase E YP_004537577.1 1516124 D 717773 CDS YP_004537578.1 334144422 10720167 complement(1516875..1517423) 1 NC_015581.1 PFAM: Invasion associated locus B; KEGG: tkm:TK90_1007 invasion associated locus B family protein; invasion associated locus B family protein 1517423 10720167 Thicy_1335 Thioalkalimicrobium cyclicum ALM1 invasion associated locus B family protein YP_004537578.1 1516875 R 717773 CDS YP_004537579.1 334144423 10720168 complement(1517480..1518163) 1 NC_015581.1 KEGG: bja:blr4802 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 1518163 10720168 Thicy_1336 Thioalkalimicrobium cyclicum ALM1 two component transcriptional regulator, winged helix family YP_004537579.1 1517480 R 717773 CDS YP_004537580.1 334144424 10720169 1518179..1520185 1 NC_015581.1 KEGG: azl:AZL_002740 two-component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 1520185 10720169 Thicy_1337 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537580.1 1518179 D 717773 CDS YP_004537581.1 334144425 10720170 1520231..1521526 1 NC_015581.1 KEGG: tcx:Tcr_1824 glutamate--cysteine ligase GshA; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA; glutamate/cysteine ligase 1521526 10720170 Thicy_1338 Thioalkalimicrobium cyclicum ALM1 glutamate/cysteine ligase YP_004537581.1 1520231 D 717773 CDS YP_004537582.1 334144426 10720171 complement(1521523..1522383) 1 NC_015581.1 KEGG: tcx:Tcr_1772 ribonuclease BN, putative; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN 1522383 10720171 Thicy_1339 Thioalkalimicrobium cyclicum ALM1 ribonuclease BN YP_004537582.1 1521523 R 717773 CDS YP_004537583.1 334144427 10720172 complement(1522401..1523708) 1 NC_015581.1 TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: tcx:Tcr_1781 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease 1523708 10720172 Thicy_1340 Thioalkalimicrobium cyclicum ALM1 carboxyl-terminal protease YP_004537583.1 1522401 R 717773 CDS YP_004537584.1 334144428 10720173 1523827..1524138 1 NC_015581.1 KEGG: tcx:Tcr_1782 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1524138 10720173 Thicy_1341 Thioalkalimicrobium cyclicum ALM1 regulatory protein ArsR YP_004537584.1 1523827 D 717773 CDS YP_004537585.1 334144429 10720175 complement(1524230..1525339) 1 NC_015581.1 PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: tcx:Tcr_0568 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1525339 10720175 Thicy_1342 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004537585.1 1524230 R 717773 CDS YP_004537586.1 334144430 10720176 complement(1525348..1526514) 1 NC_015581.1 KEGG: tcx:Tcr_0567 cell cycle protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW 1526514 10720176 Thicy_1343 Thioalkalimicrobium cyclicum ALM1 cell division protein FtsW YP_004537586.1 1525348 R 717773 CDS YP_004537587.1 334144431 10720177 complement(1526507..1527853) 1 NC_015581.1 TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: tcx:Tcr_0566 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1527853 10720177 Thicy_1344 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004537587.1 1526507 R 717773 CDS YP_004537588.1 334144432 10720178 complement(1527857..1528939) 1 NC_015581.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: tcx:Tcr_0565 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 1528939 10720178 Thicy_1345 Thioalkalimicrobium cyclicum ALM1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004537588.1 1527857 R 717773 CDS YP_004537589.1 334144433 10720179 complement(1528923..1530380) 1 NC_015581.1 TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: tcx:Tcr_0564 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1530380 10720179 Thicy_1346 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004537589.1 1528923 R 717773 CDS YP_004537590.1 334144434 10720180 complement(1530377..1531969) 1 NC_015581.1 PFAM: Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: tgr:Tgr7_0764 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 1531969 10720180 Thicy_1347 Thioalkalimicrobium cyclicum ALM1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004537590.1 1530377 R 717773 CDS YP_004537591.1 334144435 10720181 complement(1531966..1533633) 1 NC_015581.1 KEGG: tcx:Tcr_0562 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase 1533633 10720181 Thicy_1348 Thioalkalimicrobium cyclicum ALM1 peptidoglycan glycosyltransferase YP_004537591.1 1531966 R 717773 CDS YP_004537592.1 334144436 10720182 complement(1533630..1533947) 1 NC_015581.1 PFAM: Cell division protein FtsL; KEGG: tcx:Tcr_0561 cell division protein, FtsL -like; cell division protein FtsL 1533947 10720182 Thicy_1349 Thioalkalimicrobium cyclicum ALM1 cell division protein FtsL YP_004537592.1 1533630 R 717773 CDS YP_004537593.1 334144437 10720183 complement(1533968..1535218) 1 NC_015581.1 KEGG: tcx:Tcr_0560 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 1535218 10720183 Thicy_1350 Thioalkalimicrobium cyclicum ALM1 cell division protein FtsZ YP_004537593.1 1533968 R 717773 CDS YP_004537594.1 334144438 10720184 complement(1535265..1536194) 1 NC_015581.1 TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: tcx:Tcr_0559 methyltransferase; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; Ribosomal RNA small subunit methyltransferase H 1536194 10720184 Thicy_1351 Thioalkalimicrobium cyclicum ALM1 Ribosomal RNA small subunit methyltransferase H YP_004537594.1 1535265 R 717773 CDS YP_004537595.1 334144439 10720185 complement(1536191..1536649) 1 NC_015581.1 TIGRFAM: MraZ; HAMAP: MraZ; KEGG: tcx:Tcr_0558 hypothetical protein; PFAM: MraZ domain; protein mraZ 1536649 10720185 Thicy_1352 Thioalkalimicrobium cyclicum ALM1 protein mraZ YP_004537595.1 1536191 R 717773 CDS YP_004537596.1 334144440 10720187 complement(1537420..1538274) 1 NC_015581.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: tcx:Tcr_1693 hypothetical protein; PFAM: Tetrapyrrole methylase; Ribosomal RNA small subunit methyltransferase I 1538274 10720187 Thicy_1353 Thioalkalimicrobium cyclicum ALM1 Ribosomal RNA small subunit methyltransferase I YP_004537596.1 1537420 R 717773 CDS YP_004537597.1 334144441 10720188 1538333..1539907 1 NC_015581.1 KEGG: tcx:Tcr_1694 putative lipoprotein-like; hypothetical protein 1539907 10720188 Thicy_1354 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537597.1 1538333 D 717773 CDS YP_004537598.1 334144442 10720189 1539918..1540307 1 NC_015581.1 TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: vcj:VCD_001028 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 1540307 10720189 Thicy_1355 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537598.1 1539918 D 717773 CDS YP_004537599.1 334144443 10720190 1540359..1540829 1 NC_015581.1 PFAM: Ferritin/Dps protein; KEGG: amr:AM1_5202 ferritin and Dps; ferritin Dps family protein 1540829 10720190 Thicy_1356 Thioalkalimicrobium cyclicum ALM1 ferritin Dps family protein YP_004537599.1 1540359 D 717773 CDS YP_004537600.1 334144444 10720192 complement(1541046..1542833) 1 NC_015581.1 KEGG: tcx:Tcr_1806 sigma 70 (RpoD); TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 subunit RpoD 1542833 10720192 Thicy_1357 Thioalkalimicrobium cyclicum ALM1 RNA polymerase sigma-70 subunit RpoD YP_004537600.1 1541046 R 717773 CDS YP_004537601.1 334144445 10720193 complement(1542988..1544790) 1 NC_015581.1 KEGG: tcx:Tcr_1807 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase 1544790 10720193 Thicy_1358 Thioalkalimicrobium cyclicum ALM1 DNA primase YP_004537601.1 1542988 R 717773 CDS YP_004537602.1 334144446 10720194 complement(1544866..1545309) 1 NC_015581.1 KEGG: tcx:Tcr_1808 hypothetical protein; hypothetical protein 1545309 10720194 Thicy_1359 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537602.1 1544866 R 717773 CDS YP_004537603.1 334144447 10720195 complement(1545312..1545530) 1 NC_015581.1 TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 1545530 10720195 Thicy_1360 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S21 YP_004537603.1 1545312 R 717773 CDS YP_004537604.1 334144448 10720196 1545722..1546783 1 NC_015581.1 PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: tcx:Tcr_1810 glycoprotease family metalloendopeptidase; O-sialoglycoprotein endopeptidase 1546783 10720196 Thicy_1361 Thioalkalimicrobium cyclicum ALM1 O-sialoglycoprotein endopeptidase YP_004537604.1 1545722 D 717773 CDS YP_004537605.1 334144449 10720197 complement(1546767..1547354) 1 NC_015581.1 TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: tcx:Tcr_1811 hypothetical protein; PFAM: Protein of unknown function DUF205; glycerol-3-phosphate acyltransferase 1547354 10720197 Thicy_1362 Thioalkalimicrobium cyclicum ALM1 glycerol-3-phosphate acyltransferase YP_004537605.1 1546767 R 717773 CDS YP_004537606.1 334144450 10720198 1547433..1547813 1 NC_015581.1 KEGG: tkm:TK90_0193 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; Dihydroneopterin aldolase subgroup; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase 1547813 10720198 Thicy_1363 Thioalkalimicrobium cyclicum ALM1 dihydroneopterin aldolase YP_004537606.1 1547433 D 717773 CDS YP_004537607.1 334144451 10720199 1547828..1549003 1 NC_015581.1 PFAM: Protein of unknown function DUF185; KEGG: tcx:Tcr_1815 hypothetical protein; hypothetical protein 1549003 10720199 Thicy_1364 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537607.1 1547828 D 717773 CDS YP_004537608.1 334144452 10720200 1549058..1549825 1 NC_015581.1 TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: tcx:Tcr_1816 undecaprenol kinase, putative; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase 1549825 10720200 Thicy_1365 Thioalkalimicrobium cyclicum ALM1 UDP-diphosphatase YP_004537608.1 1549058 D 717773 CDS YP_004537609.1 334144453 10720202 1550164..1551555 1 NC_015581.1 TIGRFAM: Divalent cation transporter; PFAM: MgtE integral membrane region; Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; KEGG: hha:Hhal_0714 magnesium transporter; SMART: Cystathionine beta-synthase, core; magnesium transporter 1551555 10720202 Thicy_1367 Thioalkalimicrobium cyclicum ALM1 magnesium transporter YP_004537609.1 1550164 D 717773 CDS YP_004537610.1 334144454 10720204 1552355..1552693 1 NC_015581.1 KEGG: pay:PAU_01543 hypothetical protein; hypothetical protein 1552693 10720204 Thicy_1368 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537610.1 1552355 D 717773 CDS YP_004537611.1 334144455 10720205 1552715..1553170 1 NC_015581.1 KEGG: vfm:VFMJ11_1538 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1553170 10720205 Thicy_1369 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004537611.1 1552715 D 717773 CDS YP_004537612.1 334144456 10720206 complement(1553222..1555669) 1 NC_015581.1 PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: pin:Ping_0150 type III restriction enzyme, res subunit; SMART: DEAD-like helicase, N-terminal; type I site-specific deoxyribonuclease 1555669 10720206 Thicy_1370 Thioalkalimicrobium cyclicum ALM1 type I site-specific deoxyribonuclease YP_004537612.1 1553222 R 717773 CDS YP_004537613.1 334144457 10720207 complement(1555688..1556593) 1 NC_015581.1 PFAM: Abortive infection bacteriophage resistance related; KEGG: cch:Cag_1061 phage AbiD protein; Abi family protein 1556593 10720207 Thicy_1371 Thioalkalimicrobium cyclicum ALM1 Abi family protein YP_004537613.1 1555688 R 717773 CDS YP_004537614.1 334144458 10720208 complement(1556586..1556807) 1 NC_015581.1 hypothetical protein 1556807 10720208 Thicy_1372 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537614.1 1556586 R 717773 CDS YP_004537615.1 334144459 10720209 complement(1556804..1558003) 1 NC_015581.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ant:Arnit_1477 restriction modification system DNA specificity domain-containing protein; restriction modification system DNA specificity domain-containing protein 1558003 10720209 Thicy_1373 Thioalkalimicrobium cyclicum ALM1 restriction modification system DNA specificity domain-containing protein YP_004537615.1 1556804 R 717773 CDS YP_004537616.1 334144460 10720210 complement(1558000..1559457) 1 NC_015581.1 PFAM: DNA methylase, adenine-specific; KEGG: vfm:VFMJ11_2143 type I restriction-modification system, M subunit; N-6 DNA methylase 1559457 10720210 Thicy_1374 Thioalkalimicrobium cyclicum ALM1 N-6 DNA methylase YP_004537616.1 1558000 R 717773 CDS YP_004537617.1 334144461 10720212 complement(1559816..1560907) 1 NC_015581.1 KEGG: tcx:Tcr_0395 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF 1560907 10720212 Thicy_1375 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein YchF YP_004537617.1 1559816 R 717773 CDS YP_004537618.1 334144462 10720213 complement(1560937..1561524) 1 NC_015581.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: tcx:Tcr_0394 peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1561524 10720213 Thicy_1376 Thioalkalimicrobium cyclicum ALM1 peptidyl-tRNA hydrolase YP_004537618.1 1560937 R 717773 CDS YP_004537619.1 334144463 10720214 complement(1561569..1562150) 1 NC_015581.1 TIGRFAM: Ribosomal protein L25; HAMAP: Ribosomal protein L25; KEGG: tcx:Tcr_0393 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal; 50S ribosomal protein L25 1562150 10720214 Thicy_1377 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L25 YP_004537619.1 1561569 R 717773 CDS YP_004537620.1 334144464 10720215 complement(1562346..1563311) 1 NC_015581.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: tcx:Tcr_0392 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1563311 10720215 Thicy_1378 Thioalkalimicrobium cyclicum ALM1 ribose-phosphate pyrophosphokinase YP_004537620.1 1562346 R 717773 CDS YP_004537621.1 334144465 10720217 complement(1563622..1563885) 1 NC_015581.1 TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: tcx:Tcr_0492 ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 1563885 10720217 Thicy_1379 Thioalkalimicrobium cyclicum ALM1 30S ribosomal protein S20 YP_004537621.1 1563622 R 717773 CDS YP_004537622.1 334144466 10720218 complement(1564037..1564507) 1 NC_015581.1 TIGRFAM: Conserved hypothetical protein CHP00246; HAMAP: Ribosomal RNA large subunit methyltransferase H; KEGG: tcx:Tcr_0486 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; ribosomal RNA large subunit methyltransferase H 1564507 10720218 Thicy_1380 Thioalkalimicrobium cyclicum ALM1 ribosomal RNA large subunit methyltransferase H YP_004537622.1 1564037 R 717773 CDS YP_004537623.1 334144467 10720219 complement(1564510..1564872) 1 NC_015581.1 KEGG: tcx:Tcr_0485 iojap-related protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein; iojap family protein 1564872 10720219 Thicy_1381 Thioalkalimicrobium cyclicum ALM1 iojap family protein YP_004537623.1 1564510 R 717773 CDS YP_004537624.1 334144468 10720220 complement(1564850..1565548) 1 NC_015581.1 PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: tcx:Tcr_0484 putative nicotinate-nucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase 1565548 10720220 Thicy_1382 Thioalkalimicrobium cyclicum ALM1 nicotinate-nucleotide adenylyltransferase YP_004537624.1 1564850 R 717773 CDS YP_004537625.1 334144469 10720221 complement(1565678..1566931) 1 NC_015581.1 TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: tcx:Tcr_0482 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 1566931 10720221 Thicy_1383 Thioalkalimicrobium cyclicum ALM1 gamma-glutamyl phosphate reductase YP_004537625.1 1565678 R 717773 CDS YP_004537626.1 334144470 10720223 complement(1567668..1568282) 1 NC_015581.1 KEGG: hse:Hsero_3094 hypothetical protein; hypothetical protein 1568282 10720223 Thicy_1385 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537626.1 1567668 R 717773 CDS YP_004537627.1 334144471 10720224 1568406..1568654 1 NC_015581.1 KEGG: vpa:VP1073 putative immunity repressor protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1568654 10720224 Thicy_1386 Thioalkalimicrobium cyclicum ALM1 helix-turn-helix domain-containing protein YP_004537627.1 1568406 D 717773 CDS YP_004537628.1 334144472 10720225 complement(1568651..1569649) 1 NC_015581.1 KEGG: tcx:Tcr_0481 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 1569649 10720225 Thicy_1387 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III subunit delta YP_004537628.1 1568651 R 717773 CDS YP_004537629.1 334144473 10720226 complement(1569649..1570212) 1 NC_015581.1 KEGG: tcx:Tcr_0480 hypothetical protein; hypothetical protein 1570212 10720226 Thicy_1388 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537629.1 1569649 R 717773 CDS YP_004537630.1 334144474 10720227 complement(1570212..1572707) 1 NC_015581.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: tcx:Tcr_0479 leucyl-tRNA synthetase; leucyl-tRNA synthetase 1572707 10720227 Thicy_1389 Thioalkalimicrobium cyclicum ALM1 leucyl-tRNA synthetase YP_004537630.1 1570212 R 717773 CDS YP_004537631.1 334144475 10720228 1572802..1573185 1 NC_015581.1 KEGG: tcx:Tcr_0478 hypothetical protein; hypothetical protein 1573185 10720228 Thicy_1390 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537631.1 1572802 D 717773 CDS YP_004537632.1 334144476 10720229 1573290..1574906 1 NC_015581.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: tkm:TK90_2419 hypothetical protein; alpha/beta hydrolase fold protein 1574906 10720229 Thicy_1391 Thioalkalimicrobium cyclicum ALM1 alpha/beta hydrolase fold protein YP_004537632.1 1573290 D 717773 CDS YP_004537633.1 334144477 10720230 complement(1574907..1577663) 1 NC_015581.1 HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: tcx:Tcr_1497 glutamate-ammonia-ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase 1577663 10720230 Thicy_1392 Thioalkalimicrobium cyclicum ALM1 glutamate-ammonia-ligase adenylyltransferase YP_004537633.1 1574907 R 717773 CDS YP_004537634.1 334144478 10720231 1578062..1578400 1 NC_015581.1 PFAM: Nitrogen regulatory protein PII; KEGG: tcx:Tcr_1499 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 1578400 10720231 Thicy_1393 Thioalkalimicrobium cyclicum ALM1 nitrogen regulatory protein P-II YP_004537634.1 1578062 D 717773 CDS YP_004537635.1 334144479 10720232 1578435..1579676 1 NC_015581.1 KEGG: tcx:Tcr_1500 ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; PFAM: Ammonium transporter; putative ammonium transporter 1579676 10720232 Thicy_1394 Thioalkalimicrobium cyclicum ALM1 putative ammonium transporter YP_004537635.1 1578435 D 717773 CDS YP_004537636.1 334144480 10720233 complement(1579751..1580179) 1 NC_015581.1 KEGG: tcx:Tcr_1501 hypothetical protein; hypothetical protein 1580179 10720233 Thicy_1395 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537636.1 1579751 R 717773 CDS YP_004537637.1 334144481 10720234 1580293..1580940 1 NC_015581.1 SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: tcx:Tcr_0041 2OG-Fe(II) oxygenase; prolyl 4-hydroxylase subunit alpha 1580940 10720234 Thicy_1396 Thioalkalimicrobium cyclicum ALM1 prolyl 4-hydroxylase subunit alpha YP_004537637.1 1580293 D 717773 CDS YP_004537638.1 334144482 10720235 1581048..1583816 1 NC_015581.1 TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: tcx:Tcr_1503 valyl-tRNA synthetase; valyl-tRNA synthetase 1583816 10720235 Thicy_1397 Thioalkalimicrobium cyclicum ALM1 valyl-tRNA synthetase YP_004537638.1 1581048 D 717773 CDS YP_004537639.1 334144483 10720236 1583794..1584504 1 NC_015581.1 KEGG: tcx:Tcr_1504 SH3-like region; SH3 domain-containing protein 1584504 10720236 Thicy_1398 Thioalkalimicrobium cyclicum ALM1 SH3 domain-containing protein YP_004537639.1 1583794 D 717773 CDS YP_004537640.1 334144484 10720237 complement(1584594..1585316) 1 NC_015581.1 PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: tcx:Tcr_0652 thiol:disulfide interchange protein DsbC; disulfide bond isomerase DsbC/G 1585316 10720237 Thicy_1399 Thioalkalimicrobium cyclicum ALM1 disulfide bond isomerase DsbC/G YP_004537640.1 1584594 R 717773 CDS YP_004537641.1 334144485 10720238 complement(1585337..1586239) 1 NC_015581.1 KEGG: tcx:Tcr_0651 tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 1586239 10720238 Thicy_1400 Thioalkalimicrobium cyclicum ALM1 tyrosine recombinase xerC YP_004537641.1 1585337 R 717773 CDS YP_004537642.1 334144486 10720239 complement(1586389..1589739) 1 NC_015581.1 PFAM: Acriflavin resistance protein; KEGG: tcx:Tcr_0455 acriflavin resistance protein; acriflavin resistance protein 1589739 10720239 Thicy_1401 Thioalkalimicrobium cyclicum ALM1 acriflavin resistance protein YP_004537642.1 1586389 R 717773 CDS YP_004537643.1 334144487 10720240 complement(1589739..1590839) 1 NC_015581.1 KEGG: tcx:Tcr_0454 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1590839 10720240 Thicy_1402 Thioalkalimicrobium cyclicum ALM1 RND family efflux transporter MFP subunit YP_004537643.1 1589739 R 717773 CDS YP_004537644.1 334144488 10720241 complement(1590840..1592225) 1 NC_015581.1 PFAM: Outer membrane efflux protein; KEGG: tcx:Tcr_0453 outer membrane efflux protein; outer membrane efflux protein 1592225 10720241 Thicy_1403 Thioalkalimicrobium cyclicum ALM1 outer membrane efflux protein YP_004537644.1 1590840 R 717773 CDS YP_004537645.1 334144489 10720242 complement(1592335..1592970) 1 NC_015581.1 KEGG: tcx:Tcr_0452 hypothetical protein; hypothetical protein 1592970 10720242 Thicy_1404 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537645.1 1592335 R 717773 CDS YP_004537646.1 334144490 10720243 1593025..1594161 1 NC_015581.1 HAMAP: Erythronate-4-phosphate dehydrogenase; KEGG: tcx:Tcr_0451 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Erythronate-4-phosphate dehydrogenase 1594161 10720243 Thicy_1405 Thioalkalimicrobium cyclicum ALM1 Erythronate-4-phosphate dehydrogenase YP_004537646.1 1593025 D 717773 CDS YP_004537647.1 334144491 10720244 1594340..1594912 1 NC_015581.1 PFAM: Protein of unknown function DUF302; KEGG: tcx:Tcr_0450 hypothetical protein; hypothetical protein 1594912 10720244 Thicy_1406 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537647.1 1594340 D 717773 CDS YP_004537648.1 334144492 10720245 1595214..1596473 1 NC_015581.1 PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: tcx:Tcr_0449 aromatic hydrocarbon degradation protein; aromatic hydrocarbon degradation membrane protein 1596473 10720245 Thicy_1407 Thioalkalimicrobium cyclicum ALM1 aromatic hydrocarbon degradation membrane protein YP_004537648.1 1595214 D 717773 CDS YP_004537649.1 334144493 10720246 1596693..1597514 1 NC_015581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0448 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1597514 10720246 Thicy_1408 Thioalkalimicrobium cyclicum ALM1 NAD-dependent epimerase/dehydratase YP_004537649.1 1596693 D 717773 CDS YP_004537650.1 334144494 10720247 1597547..1598605 1 NC_015581.1 KEGG: tcx:Tcr_1717 hydroxymethylglutaryl-CoA reductase (NADPH); PFAM: Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic; Hydroxymethylglutaryl-CoA reductase 1598605 10720247 Thicy_1409 Thioalkalimicrobium cyclicum ALM1 Hydroxymethylglutaryl-CoA reductase YP_004537650.1 1597547 D 717773 CDS YP_004537651.1 334144495 10720248 1598606..1599643 1 NC_015581.1 TIGRFAM: Isopentenyl-diphosphate delta-isomerase, FMN-dependent; HAMAP: Isopentenyl-diphosphate delta-isomerase; KEGG: tcx:Tcr_1718 isopentenyl pyrophosphate isomerase; isopentenyl-diphosphate delta-isomerase 1599643 10720248 Thicy_1410 Thioalkalimicrobium cyclicum ALM1 isopentenyl-diphosphate delta-isomerase YP_004537651.1 1598606 D 717773 CDS YP_004537652.1 334144496 10720249 1599664..1600842 1 NC_015581.1 TIGRFAM: Hydroxymethylglutaryl-CoA synthase, prokaryotic; KEGG: tcx:Tcr_1719 hydroxymethylglutaryl-coenzyme A synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal; Hydroxymethylglutaryl-coenzyme A synthase C-terminal; hydroxymethylglutaryl-CoA synthase 1600842 10720249 Thicy_1411 Thioalkalimicrobium cyclicum ALM1 hydroxymethylglutaryl-CoA synthase YP_004537652.1 1599664 D 717773 CDS YP_004537653.1 334144497 10720250 1600844..1601887 1 NC_015581.1 PFAM: GHMP kinase; KEGG: tcx:Tcr_1732 GHMP kinase; GHMP kinase 1601887 10720250 Thicy_1412 Thioalkalimicrobium cyclicum ALM1 GHMP kinase YP_004537653.1 1600844 D 717773 CDS YP_004537654.1 334144498 10720251 1601884..1602900 1 NC_015581.1 PFAM: GHMP kinase; KEGG: tcx:Tcr_1733 GHMP kinase; GHMP kinase 1602900 10720251 Thicy_1413 Thioalkalimicrobium cyclicum ALM1 GHMP kinase YP_004537654.1 1601884 D 717773 CDS YP_004537655.1 334144499 10720252 1602936..1603979 1 NC_015581.1 TIGRFAM: Diphosphomevalonate decarboxylase; KEGG: tcx:Tcr_1734 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; diphosphomevalonate decarboxylase 1603979 10720252 Thicy_1414 Thioalkalimicrobium cyclicum ALM1 diphosphomevalonate decarboxylase YP_004537655.1 1602936 D 717773 CDS YP_004537656.1 334144500 10720253 complement(1603987..1604403) 1 NC_015581.1 PFAM: Stringent starvation protein B; KEGG: tcx:Tcr_1738 ClpXP protease specificity-enhancing factor; stringent starvation protein B 1604403 10720253 Thicy_1415 Thioalkalimicrobium cyclicum ALM1 stringent starvation protein B YP_004537656.1 1603987 R 717773 CDS YP_004537657.1 334144501 10720254 complement(1604422..1605057) 1 NC_015581.1 PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: tcx:Tcr_1739 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 1605057 10720254 Thicy_1416 Thioalkalimicrobium cyclicum ALM1 glutathione S-transferase domain-containing protein YP_004537657.1 1604422 R 717773 CDS YP_004537658.1 334144502 10720255 complement(1605241..1605591) 1 NC_015581.1 PFAM: GtrA-like protein; KEGG: esc:Entcl_1658 GtrA family protein; GtrA family protein 1605591 10720255 Thicy_1417 Thioalkalimicrobium cyclicum ALM1 GtrA family protein YP_004537658.1 1605241 R 717773 CDS YP_004537659.1 334144503 10720256 complement(1605595..1606602) 1 NC_015581.1 PFAM: Glycosyl transferase, family 2; KEGG: sua:Saut_1555 glycosyl transferase family 2; family 2 glycosyl transferase 1606602 10720256 Thicy_1418 Thioalkalimicrobium cyclicum ALM1 family 2 glycosyl transferase YP_004537659.1 1605595 R 717773 CDS YP_004537660.1 334144504 10720257 complement(1606605..1608203) 1 NC_015581.1 PFAM: Glycosyl transferase, family 39; KEGG: alv:Alvin_1542 glycosyl transferase family 39; glycosyl transferase family protein 1608203 10720257 Thicy_1419 Thioalkalimicrobium cyclicum ALM1 glycosyl transferase family protein YP_004537660.1 1606605 R 717773 CDS YP_004537661.1 334144505 10720260 complement(1609397..1609789) 1 NC_015581.1 KEGG: tcx:Tcr_1660 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR 1609789 10720260 Thicy_1422 Thioalkalimicrobium cyclicum ALM1 regulatory protein MerR YP_004537661.1 1609397 R 717773 CDS YP_004537662.1 334144506 10720261 complement(1609804..1610097) 1 NC_015581.1 SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: tcx:Tcr_1661 integration host factor, alpha subunit; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit alpha 1610097 10720261 Thicy_1423 Thioalkalimicrobium cyclicum ALM1 Integration host factor subunit alpha YP_004537662.1 1609804 R 717773 CDS YP_004537663.1 334144507 10720262 complement(1610107..1612482) 1 NC_015581.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: tcx:Tcr_1662 phenylalanyl-tRNA synthetase, beta subunit; Phenylalanyl-tRNA synthetase subunit beta 1612482 10720262 Thicy_1424 Thioalkalimicrobium cyclicum ALM1 Phenylalanyl-tRNA synthetase subunit beta YP_004537663.1 1610107 R 717773 CDS YP_004537664.1 334144508 10720263 complement(1612510..1613508) 1 NC_015581.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: tcx:Tcr_1663 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; Phenylalanyl-tRNA synthetase subunit alpha 1613508 10720263 Thicy_1425 Thioalkalimicrobium cyclicum ALM1 Phenylalanyl-tRNA synthetase subunit alpha YP_004537664.1 1612510 R 717773 CDS YP_004537665.1 334144509 10720264 complement(1613663..1614019) 1 NC_015581.1 TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: tcx:Tcr_1664 50S ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 1614019 10720264 Thicy_1426 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L20 YP_004537665.1 1613663 R 717773 CDS YP_004537666.1 334144510 10720265 complement(1614035..1614232) 1 NC_015581.1 TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: tcx:Tcr_1665 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 1614232 10720265 Thicy_1427 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L35 YP_004537666.1 1614035 R 717773 CDS YP_004537667.1 334144511 10720266 complement(1614393..1614866) 1 NC_015581.1 TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: slt:Slit_1736 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; translation initiation factor IF-3 1614866 10720266 Thicy_1428 Thioalkalimicrobium cyclicum ALM1 translation initiation factor IF-3 YP_004537667.1 1614393 R 717773 CDS YP_004537668.1 334144512 10720267 complement(1614971..1616908) 1 NC_015581.1 KEGG: tcx:Tcr_1667 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; threonyl-tRNA synthetase 1616908 10720267 Thicy_1429 Thioalkalimicrobium cyclicum ALM1 threonyl-tRNA synthetase YP_004537668.1 1614971 R 717773 CDS YP_004537669.1 334144513 10720268 1617089..1617739 1 NC_015581.1 KEGG: tcx:Tcr_1671 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1617739 10720268 Thicy_1430 Thioalkalimicrobium cyclicum ALM1 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004537669.1 1617089 D 717773 CDS YP_004537670.1 334144514 10720269 complement(1617961..1619067) 1 NC_015581.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: tcx:Tcr_1746 permease YjgP/YjgQ; YjgP/YjgQ family permease 1619067 10720269 Thicy_1431 Thioalkalimicrobium cyclicum ALM1 YjgP/YjgQ family permease YP_004537670.1 1617961 R 717773 CDS YP_004537671.1 334144515 10720270 complement(1619064..1620131) 1 NC_015581.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: tcx:Tcr_1747 permease YjgP/YjgQ; YjgP/YjgQ family permease 1620131 10720270 Thicy_1432 Thioalkalimicrobium cyclicum ALM1 YjgP/YjgQ family permease YP_004537671.1 1619064 R 717773 CDS YP_004537672.1 334144516 10720271 1620237..1621712 1 NC_015581.1 HAMAP: cytosol aminopeptidase; KEGG: tcx:Tcr_1748 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 1621712 10720271 Thicy_1433 Thioalkalimicrobium cyclicum ALM1 cytosol aminopeptidase YP_004537672.1 1620237 D 717773 CDS YP_004537673.1 334144517 10720272 1621723..1622160 1 NC_015581.1 KEGG: tcx:Tcr_1749 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit, HolC 1622160 10720272 Thicy_1434 Thioalkalimicrobium cyclicum ALM1 DNA polymerase III chi subunit, HolC YP_004537673.1 1621723 D 717773 CDS YP_004537674.1 334144518 10720273 complement(1622161..1622805) 1 NC_015581.1 KEGG: gca:Galf_2321 two component transcriptional regulator, fis family; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family two component transcriptional regulator 1622805 10720273 Thicy_1435 Thioalkalimicrobium cyclicum ALM1 Fis family two component transcriptional regulator YP_004537674.1 1622161 R 717773 CDS YP_004537675.1 334144519 10720274 complement(1622917..1624956) 1 NC_015581.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: tcx:Tcr_1754 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; UvrB/UvrC protein; UvrABC system protein B 1624956 10720274 Thicy_1436 Thioalkalimicrobium cyclicum ALM1 UvrABC system protein B YP_004537675.1 1622917 R 717773 CDS YP_004537676.1 334144520 10720275 1625095..1626279 1 NC_015581.1 KEGG: tcx:Tcr_1755 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; aspartate transaminase 1626279 10720275 Thicy_1437 Thioalkalimicrobium cyclicum ALM1 aspartate transaminase YP_004537676.1 1625095 D 717773 CDS YP_004537677.1 334144521 10720277 1626596..1627384 1 NC_015581.1 KEGG: hypothetical protein; hypothetical protein 1627384 10720277 Thicy_1438 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537677.1 1626596 D 717773 CDS YP_004537678.1 334144522 10720279 1627385..1628656 1 NC_015581.1 KEGG: tcx:Tcr_2194 RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: Deoxyribonuclease/rho motif-related TRAM; Methyltransferase small; TrmA family RNA methyltransferase 1628656 10720279 Thicy_1439 Thioalkalimicrobium cyclicum ALM1 TrmA family RNA methyltransferase YP_004537678.1 1627385 D 717773 CDS YP_004537679.1 334144523 10720280 complement(1628686..1631862) 1 NC_015581.1 PFAM: Acriflavin resistance protein; KEGG: alv:Alvin_2517 acriflavin resistance protein; acriflavin resistance protein 1631862 10720280 Thicy_1440 Thioalkalimicrobium cyclicum ALM1 acriflavin resistance protein YP_004537679.1 1628686 R 717773 CDS YP_004537680.1 334144524 10720281 complement(1631871..1632935) 1 NC_015581.1 KEGG: sse:Ssed_2428 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1632935 10720281 Thicy_1441 Thioalkalimicrobium cyclicum ALM1 RND family efflux transporter MFP subunit YP_004537680.1 1631871 R 717773 CDS YP_004537681.1 334144525 10720282 1633129..1634247 1 NC_015581.1 PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: tcx:Tcr_1864 ferrochelatase; ferrochelatase 1634247 10720282 Thicy_1442 Thioalkalimicrobium cyclicum ALM1 ferrochelatase YP_004537681.1 1633129 D 717773 CDS YP_004537682.1 334144526 10720283 complement(1634291..1636525) 1 NC_015581.1 TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_1987 primosomal protein N' (replication factor Y); SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; primosomal protein N' 1636525 10720283 Thicy_1443 Thioalkalimicrobium cyclicum ALM1 primosomal protein N' YP_004537682.1 1634291 R 717773 CDS YP_004537683.1 334144527 10720284 complement(1636621..1638333) 1 NC_015581.1 PFAM: Polypeptide-transport-associated, ShlB-type; Bacterial surface antigen (D15); KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type 1638333 10720284 Thicy_1444 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein ShlB-type YP_004537683.1 1636621 R 717773 CDS YP_004537684.1 334144528 10720285 complement(1638358..1668180) 1 NC_015581.1 KEGG: dal:Dalk_0372 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; filamentous hemagglutinin family outer membrane protein 1668180 10720285 Thicy_1445 Thioalkalimicrobium cyclicum ALM1 filamentous hemagglutinin family outer membrane protein YP_004537684.1 1638358 R 717773 CDS YP_004537685.1 334144529 10720286 complement(1668604..1669596) 1 NC_015581.1 KEGG: swi:Swit_0970 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1669596 10720286 Thicy_1446 Thioalkalimicrobium cyclicum ALM1 AraC family transcriptional regulator YP_004537685.1 1668604 R 717773 CDS YP_004537686.1 334144530 10720287 1669782..1670303 1 NC_015581.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: tcx:Tcr_2006 tripartite ATP-independent periplasmic transporter DctQ; tripartite AtP-independent periplasmic transporter subunit DctQ 1670303 10720287 Thicy_1447 Thioalkalimicrobium cyclicum ALM1 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004537686.1 1669782 D 717773 CDS YP_004537687.1 334144531 10720288 1670305..1671690 1 NC_015581.1 KEGG: tcx:Tcr_2007 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 1671690 10720288 Thicy_1448 Thioalkalimicrobium cyclicum ALM1 TRAP dicarboxylate transporter subunit DctM YP_004537687.1 1670305 D 717773 CDS YP_004537688.1 334144532 10720289 complement(1671727..1672626) 1 NC_015581.1 PFAM: Protein of unknown function DUF6, transmembrane; KEGG: rba:RB4923 putative permease; hypothetical protein 1672626 10720289 Thicy_1449 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537688.1 1671727 R 717773 CDS YP_004537689.1 334144533 10720290 1672789..1675038 1 NC_015581.1 KEGG: alv:Alvin_2061 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal; lysine decarboxylase 1675038 10720290 Thicy_1450 Thioalkalimicrobium cyclicum ALM1 lysine decarboxylase YP_004537689.1 1672789 D 717773 CDS YP_004537690.1 334144534 10720291 1675083..1676570 1 NC_015581.1 KEGG: tcx:Tcr_0968 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase 1676570 10720291 Thicy_1451 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537690.1 1675083 D 717773 CDS YP_004537691.1 334144535 10720292 1676567..1677286 1 NC_015581.1 KEGG: ppd:Ppro_2228 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 1677286 10720292 Thicy_1452 Thioalkalimicrobium cyclicum ALM1 two component transcriptional regulator, winged helix family YP_004537691.1 1676567 D 717773 CDS YP_004537692.1 334144536 10720293 complement(1677301..1678536) 1 NC_015581.1 KEGG: reh:H16_A0973 flavoprotein; TIGRFAM: uncharacterized flavoprotein, PP_4765 family; HI0933-like protein; PFAM: HI0933-like protein; flavoprotein 1678536 10720293 Thicy_1453 Thioalkalimicrobium cyclicum ALM1 flavoprotein YP_004537692.1 1677301 R 717773 CDS YP_004537693.1 334144537 10720294 complement(1678626..1679681) 1 NC_015581.1 KEGG: tcx:Tcr_1700 beta-lactamase-like; beta-lactamase-like protein 1679681 10720294 Thicy_1454 Thioalkalimicrobium cyclicum ALM1 beta-lactamase-like protein YP_004537693.1 1678626 R 717773 CDS YP_004537694.1 334144538 10720295 complement(1679731..1680330) 1 NC_015581.1 PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcx:Tcr_1702 TetR family transcriptional regulator; TetR family transcriptional regulator 1680330 10720295 Thicy_1455 Thioalkalimicrobium cyclicum ALM1 TetR family transcriptional regulator YP_004537694.1 1679731 R 717773 CDS YP_004537695.1 334144539 10720296 1680758..1682557 1 NC_015581.1 KEGG: tcx:Tcr_2009 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1682557 10720296 Thicy_1456 Thioalkalimicrobium cyclicum ALM1 DEAD/DEAH box helicase domain-containing protein YP_004537695.1 1680758 D 717773 CDS YP_004537696.1 334144540 10720297 complement(1682649..1683647) 1 NC_015581.1 KEGG: stp:Strop_2972 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-lactate dehydrogenase 1683647 10720297 Thicy_1457 Thioalkalimicrobium cyclicum ALM1 D-lactate dehydrogenase YP_004537696.1 1682649 R 717773 CDS YP_004537697.1 334144541 10720298 complement(1683672..1684832) 1 NC_015581.1 PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: tcx:Tcr_2011 TRAP dicarboxylate transporter-DctP subunit; extracellular solute-binding protein 1684832 10720298 Thicy_1458 Thioalkalimicrobium cyclicum ALM1 extracellular solute-binding protein YP_004537697.1 1683672 R 717773 CDS YP_004537698.1 334144542 10720299 1684934..1685659 1 NC_015581.1 KEGG: sdn:Sden_3163 hypothetical protein; hypothetical protein 1685659 10720299 Thicy_1459 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537698.1 1684934 D 717773 CDS YP_004537699.1 334144543 10720300 1685684..1686733 1 NC_015581.1 TIGRFAM: Secretion protein HlyD; KEGG: eba:ebA3924 secretion protein HlyD; RND family efflux transporter MFP subunit 1686733 10720300 Thicy_1460 Thioalkalimicrobium cyclicum ALM1 RND family efflux transporter MFP subunit YP_004537699.1 1685684 D 717773 CDS YP_004537700.1 334144544 10720301 1686730..1689792 1 NC_015581.1 PFAM: Acriflavin resistance protein; KEGG: tmz:Tmz1t_3537 acriflavin resistance protein; acriflavin resistance protein 1689792 10720301 Thicy_1461 Thioalkalimicrobium cyclicum ALM1 acriflavin resistance protein YP_004537700.1 1686730 D 717773 CDS YP_004537701.1 334144545 10720302 1689891..1691996 1 NC_015581.1 KEGG: hha:Hhal_0551 TonB-dependent receptor; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; outer membrane insertion C-terminal signal 1691996 10720302 Thicy_1462 Thioalkalimicrobium cyclicum ALM1 outer membrane insertion C-terminal signal YP_004537701.1 1689891 D 717773 CDS YP_004537702.1 334144546 10720303 1692150..1694972 1 NC_015581.1 KEGG: tcx:Tcr_0063 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; Na+/H+ antiporter MnhB subunit-related protein; NADH dehydrogenase (quinone) 1694972 10720303 Thicy_1463 Thioalkalimicrobium cyclicum ALM1 NADH dehydrogenase (quinone) YP_004537702.1 1692150 D 717773 CDS YP_004537703.1 334144547 10720304 1694972..1695322 1 NC_015581.1 PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: tcx:Tcr_0062 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 1695322 10720304 Thicy_1464 Thioalkalimicrobium cyclicum ALM1 NADH-ubiquinone oxidoreductase chain 4L YP_004537703.1 1694972 D 717773 CDS YP_004537704.1 334144548 10720305 1695322..1696842 1 NC_015581.1 KEGG: tcx:Tcr_0061 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 1696842 10720305 Thicy_1465 Thioalkalimicrobium cyclicum ALM1 NADH dehydrogenase (quinone) YP_004537704.1 1695322 D 717773 CDS YP_004537705.1 334144549 10720306 1696842..1697336 1 NC_015581.1 PFAM: cation antiporter; KEGG: tcx:Tcr_0060 cation antiporter; cation antiporter 1697336 10720306 Thicy_1466 Thioalkalimicrobium cyclicum ALM1 cation antiporter YP_004537705.1 1696842 D 717773 CDS YP_004537706.1 334144550 10720307 1697330..1697599 1 NC_015581.1 PFAM: Multiple resistance and pH regulation protein F; KEGG: tcx:Tcr_0059 putative monovalent cation/H+ antiporter subunit F; multiple resistance and pH regulation protein F 1697599 10720307 Thicy_1467 Thioalkalimicrobium cyclicum ALM1 multiple resistance and pH regulation protein F YP_004537706.1 1697330 D 717773 CDS YP_004537707.1 334144551 10720308 1697609..1697932 1 NC_015581.1 KEGG: tcx:Tcr_0058 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 1697932 10720308 Thicy_1468 Thioalkalimicrobium cyclicum ALM1 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004537707.1 1697609 D 717773 CDS YP_004537708.1 334144552 10720309 1698105..1699181 1 NC_015581.1 KEGG: tcx:Tcr_0218 exonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 1699181 10720309 Thicy_1469 Thioalkalimicrobium cyclicum ALM1 Exonuclease RNase T and DNA polymerase III YP_004537708.1 1698105 D 717773 CDS YP_004537709.1 334144553 10720310 1699190..1699651 1 NC_015581.1 HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: tcx:Tcr_0217 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1699651 10720310 Thicy_1470 Thioalkalimicrobium cyclicum ALM1 phosphoribosyl-AMP cyclohydrolase YP_004537709.1 1699190 D 717773 CDS YP_004537710.1 334144554 10720311 complement(1699659..1700579) 1 NC_015581.1 KEGG: tcx:Tcr_2014 chaperone DnaJ-like; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; chaperone DnaJ domain-containing protein 1700579 10720311 Thicy_1471 Thioalkalimicrobium cyclicum ALM1 chaperone DnaJ domain-containing protein YP_004537710.1 1699659 R 717773 CDS YP_004537711.1 334144555 10720312 1700724..1702103 1 NC_015581.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: tcx:Tcr_1882 hypothetical protein; hypothetical protein 1702103 10720312 Thicy_1472 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537711.1 1700724 D 717773 CDS YP_004537712.1 334144556 10720313 1702123..1703364 1 NC_015581.1 KEGG: tcx:Tcr_1883 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1703364 10720313 Thicy_1473 Thioalkalimicrobium cyclicum ALM1 DEAD/DEAH box helicase domain-containing protein YP_004537712.1 1702123 D 717773 CDS YP_004537713.1 334144557 10720314 complement(1703376..1704932) 1 NC_015581.1 PFAM: AAA-ATPase-like; Protein of unknown function DUF1703; KEGG: ddf:DEFDS_0353 hypothetical protein; AAA-ATPase-like protein 1704932 10720314 Thicy_1474 Thioalkalimicrobium cyclicum ALM1 AAA-ATPase-like protein YP_004537713.1 1703376 R 717773 CDS YP_004537714.1 334144558 10720315 complement(1705120..1720284) 1 NC_015581.1 KEGG: rba:RB3527 heme/hemopexin utilization protein HuxA; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Polymorphic membrane protein, Chlamydia; filamentous hemagglutinin family outer membrane protein 1720284 10720315 Thicy_1475 Thioalkalimicrobium cyclicum ALM1 filamentous hemagglutinin family outer membrane protein YP_004537714.1 1705120 R 717773 CDS YP_004537715.1 334144559 10720316 complement(1720307..1722097) 1 NC_015581.1 PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type 1722097 10720316 Thicy_1476 Thioalkalimicrobium cyclicum ALM1 Polypeptide-transport-associated domain-containing protein ShlB-type YP_004537715.1 1720307 R 717773 CDS YP_004537716.1 334144560 10720317 complement(1722258..1722932) 1 NC_015581.1 KEGG: har:HEAR0396 putative response regulator in two-component regulatory system; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 1722932 10720317 Thicy_1477 Thioalkalimicrobium cyclicum ALM1 two component transcriptional regulator, winged helix family YP_004537716.1 1722258 R 717773 CDS YP_004537717.1 334144561 10720318 complement(1723030..1724919) 1 NC_015581.1 KEGG: har:HEAR0395 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, extracellular region 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 1724919 10720318 Thicy_1478 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537717.1 1723030 R 717773 CDS YP_004537718.1 334144562 10720319 complement(1724932..1725990) 1 NC_015581.1 TIGRFAM: Pseudouridine synthase, TruD; HAMAP: tRNA pseudouridine synthase D; KEGG: tcx:Tcr_0216 pseudouridylate synthase; PFAM: Pseudouridine synthase, TruD; tRNA pseudouridine synthase D 1725990 10720319 Thicy_1479 Thioalkalimicrobium cyclicum ALM1 tRNA pseudouridine synthase D YP_004537718.1 1724932 R 717773 CDS YP_004537719.1 334144563 10720320 complement(1725998..1726951) 1 NC_015581.1 PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: tcx:Tcr_0214 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 1726951 10720320 Thicy_1480 Thioalkalimicrobium cyclicum ALM1 import inner membrane translocase subunit Tim44 YP_004537719.1 1725998 R 717773 CDS YP_004537720.1 334144564 10720321 complement(1727035..1728201) 1 NC_015581.1 KEGG: tcx:Tcr_0211 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Alcohol dehydrogenase 1728201 10720321 Thicy_1481 Thioalkalimicrobium cyclicum ALM1 Alcohol dehydrogenase YP_004537720.1 1727035 R 717773 CDS YP_004537721.1 334144565 10720322 complement(1728258..1730342) 1 NC_015581.1 PFAM: DNA helicase, UvrD/REP type; KEGG: tcx:Tcr_0212 UvrD/REP helicase; UvrD/REP helicase 1730342 10720322 Thicy_1482 Thioalkalimicrobium cyclicum ALM1 UvrD/REP helicase YP_004537721.1 1728258 R 717773 CDS YP_004537722.1 334144566 10720323 1730400..1730993 1 NC_015581.1 PFAM: Phosphoglycerate mutase; KEGG: pol:Bpro_4901 phosphoglycerate mutase; phosphoglycerate mutase 1730993 10720323 Thicy_1483 Thioalkalimicrobium cyclicum ALM1 phosphoglycerate mutase YP_004537722.1 1730400 D 717773 CDS YP_004537723.1 334144567 10720324 1731120..1732967 1 NC_015581.1 KEGG: cjj:CJJ81176_0174 McrBC restriction endonuclease system, McrB subunit, putative; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 1732967 10720324 Thicy_1484 Thioalkalimicrobium cyclicum ALM1 ATPase YP_004537723.1 1731120 D 717773 CDS YP_004537724.1 334144568 10720325 1732976..1733242 1 NC_015581.1 KEGG: alv:Alvin_1349 hypothetical protein; hypothetical protein 1733242 10720325 Thicy_1485 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537724.1 1732976 D 717773 CDS YP_004537725.1 334144569 10720326 1733235..1733486 1 NC_015581.1 PFAM: Protein of unknown function DUF2442; KEGG: cli:Clim_0923 hypothetical protein; hypothetical protein 1733486 10720326 Thicy_1486 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537725.1 1733235 D 717773 CDS YP_004537726.1 334144570 10720327 1733487..1734773 1 NC_015581.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: sbm:Shew185_1981 hypothetical protein; 5-methylcytosine restriction system component-like protein 1734773 10720327 Thicy_1487 Thioalkalimicrobium cyclicum ALM1 5-methylcytosine restriction system component-like protein YP_004537726.1 1733487 D 717773 CDS YP_004537727.1 334144571 10720328 1734774..1735025 1 NC_015581.1 hypothetical protein 1735025 10720328 Thicy_1488 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537727.1 1734774 D 717773 CDS YP_004537728.1 334144572 10720329 complement(1735071..1736351) 1 NC_015581.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: psa:PST_0568 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase 1736351 10720329 Thicy_1489 Thioalkalimicrobium cyclicum ALM1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004537728.1 1735071 R 717773 CDS YP_004537729.1 334144573 10720330 complement(1736456..1737106) 1 NC_015581.1 PFAM: Cupin 2, conserved barrel; KEGG: tcx:Tcr_1225 anti-sigm factor, ChrR; anti-ECFsigma factor ChrR 1737106 10720330 Thicy_1490 Thioalkalimicrobium cyclicum ALM1 anti-ECFsigma factor ChrR YP_004537729.1 1736456 R 717773 CDS YP_004537730.1 334144574 10720331 1737193..1737774 1 NC_015581.1 PFAM: Methyltransferase small; KEGG: tcx:Tcr_0213 methyltransferase small; methyltransferase small 1737774 10720331 Thicy_1491 Thioalkalimicrobium cyclicum ALM1 methyltransferase small YP_004537730.1 1737193 D 717773 CDS YP_004537731.1 334144575 10720332 complement(1737854..1738948) 1 NC_015581.1 KEGG: min:Minf_1656 TPR repeat protein, SEL1 subfamily; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 1738948 10720332 Thicy_1492 Thioalkalimicrobium cyclicum ALM1 Sel1 domain-containing protein repeat-containing protein YP_004537731.1 1737854 R 717773 CDS YP_004537732.1 334144576 10720333 complement(1738962..1739504) 1 NC_015581.1 PFAM: Ankyrin repeat; ankyrin 1739504 10720333 Thicy_1493 Thioalkalimicrobium cyclicum ALM1 ankyrin YP_004537732.1 1738962 R 717773 CDS YP_004537733.1 334144577 10720334 complement(1739533..1740435) 1 NC_015581.1 hypothetical protein 1740435 10720334 Thicy_1494 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537733.1 1739533 R 717773 CDS YP_004537734.1 334144578 10720335 1740693..1741883 1 NC_015581.1 SMART: ATPase, AAA+ type, core; KEGG: ddf:DEFDS_0880 hypothetical protein; AAA ATPase 1741883 10720335 Thicy_1495 Thioalkalimicrobium cyclicum ALM1 AAA ATPase YP_004537734.1 1740693 D 717773 CDS YP_004537735.1 334144579 10720338 complement(1744151..1747417) 1 NC_015581.1 KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; adenine specific DNA methyltransferase 1747417 10720338 Thicy_1498 Thioalkalimicrobium cyclicum ALM1 adenine specific DNA methyltransferase YP_004537735.1 1744151 R 717773 CDS YP_004537736.1 334144580 10720339 complement(1747508..1747699) 1 NC_015581.1 PFAM: HAD superfamily hydrolase-like, type 3; haloacid dehalogenase domain-containing protein hydrolase 1747699 10720339 Thicy_1499 Thioalkalimicrobium cyclicum ALM1 haloacid dehalogenase domain-containing protein hydrolase YP_004537736.1 1747508 R 717773 CDS YP_004537737.1 334144581 10720340 1747934..1748320 1 NC_015581.1 PFAM: Uncharacterised protein family UPF0153; KEGG: xne:XNC1_3203 putative ferredoxin; hypothetical protein 1748320 10720340 Thicy_1500 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537737.1 1747934 D 717773 CDS YP_004537738.1 334144582 10720341 complement(1748342..1748536) 1 NC_015581.1 hypothetical protein 1748536 10720341 Thicy_1501 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537738.1 1748342 R 717773 CDS YP_004537739.1 334144583 10720342 complement(1748533..1748853) 1 NC_015581.1 hypothetical protein 1748853 10720342 Thicy_1502 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537739.1 1748533 R 717773 CDS YP_004537740.1 334144584 10720343 complement(1748858..1749373) 1 NC_015581.1 KEGG: hypothetical protein; hypothetical protein 1749373 10720343 Thicy_1503 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537740.1 1748858 R 717773 CDS YP_004537741.1 334144585 10720344 complement(1749391..1750290) 1 NC_015581.1 TIGRFAM: beta-carotene 15,15'-monooxygenase, Brp/Blh family; KEGG: apb:SAR116_2131 putative transmembrane protein; Brp/Blh family beta-carotene 15,15'-monooxygenase 1750290 10720344 Thicy_1504 Thioalkalimicrobium cyclicum ALM1 Brp/Blh family beta-carotene 15,15'-monooxygenase YP_004537741.1 1749391 R 717773 CDS YP_004537742.1 334144586 10720345 complement(1750292..1751446) 1 NC_015581.1 PFAM: Lycopene beta/epsilon cyclase; KEGG: vha:VIBHAR_02164 hypothetical protein; Lycopene beta and epsilon cyclase 1751446 10720345 Thicy_1505 Thioalkalimicrobium cyclicum ALM1 Lycopene beta and epsilon cyclase YP_004537742.1 1750292 R 717773 CDS YP_004537743.1 334144587 10720346 complement(1751446..1752318) 1 NC_015581.1 KEGG: vha:VIBHAR_02163 phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase 1752318 10720346 Thicy_1506 Thioalkalimicrobium cyclicum ALM1 phytoene synthase YP_004537743.1 1751446 R 717773 CDS YP_004537744.1 334144588 10720347 complement(1752318..1753802) 1 NC_015581.1 KEGG: rva:Rvan_0155 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; phytoene desaturase 1753802 10720347 Thicy_1507 Thioalkalimicrobium cyclicum ALM1 phytoene desaturase YP_004537744.1 1752318 R 717773 CDS YP_004537745.1 334144589 10720348 complement(1753799..1754689) 1 NC_015581.1 PFAM: Polyprenyl synthetase; KEGG: vha:VIBHAR_02161 hypothetical protein; polyprenyl synthetase 1754689 10720348 Thicy_1508 Thioalkalimicrobium cyclicum ALM1 polyprenyl synthetase YP_004537745.1 1753799 R 717773 CDS YP_004537746.1 334144590 10720349 complement(1754772..1755521) 1 NC_015581.1 PFAM: Rhodopsin, bacterial; KEGG: gvi:gll0198 bacterioopsin; rhodopsin 1755521 10720349 Thicy_1509 Thioalkalimicrobium cyclicum ALM1 rhodopsin YP_004537746.1 1754772 R 717773 CDS YP_004537747.1 334144591 10720350 complement(1755736..1756431) 1 NC_015581.1 KEGG: tcx:Tcr_0203 hypothetical protein; hypothetical protein 1756431 10720350 Thicy_1510 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537747.1 1755736 R 717773 CDS YP_004537748.1 334144592 10720351 complement(1756431..1757942) 1 NC_015581.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: tcx:Tcr_0202 Mg chelatase-related protein; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI 1757942 10720351 Thicy_1511 Thioalkalimicrobium cyclicum ALM1 Mg chelatase subunit ChlI YP_004537748.1 1756431 R 717773 CDS YP_004537749.1 334144593 10720352 complement(1757939..1758193) 1 NC_015581.1 PFAM: Protein of unknown function DUF526; KEGG: amc:MADE_00075 hypothetical protein; hypothetical protein 1758193 10720352 Thicy_1512 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537749.1 1757939 R 717773 CDS YP_004537750.1 334144594 10720353 complement(1758288..1758971) 1 NC_015581.1 PFAM: Sporulation/cell division region, bacteria; KEGG: tcx:Tcr_0199 sporulation related; sporulation domain-containing protein 1758971 10720353 Thicy_1513 Thioalkalimicrobium cyclicum ALM1 sporulation domain-containing protein YP_004537750.1 1758288 R 717773 CDS YP_004537751.1 334144595 10720354 complement(1758981..1760762) 1 NC_015581.1 TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: tcx:Tcr_0198 arginyl-tRNA synthetase; arginyl-tRNA synthetase 1760762 10720354 Thicy_1514 Thioalkalimicrobium cyclicum ALM1 arginyl-tRNA synthetase YP_004537751.1 1758981 R 717773 CDS YP_004537752.1 334144596 10720355 complement(1760808..1763246) 1 NC_015581.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: tcx:Tcr_0196 DNA topoisomerase; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase I 1763246 10720355 Thicy_1515 Thioalkalimicrobium cyclicum ALM1 DNA topoisomerase I YP_004537752.1 1760808 R 717773 CDS YP_004537753.1 334144597 10720356 complement(1763323..1764342) 1 NC_015581.1 KEGG: tcx:Tcr_0271 hypothetical protein; hypothetical protein 1764342 10720356 Thicy_1516 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537753.1 1763323 R 717773 CDS YP_004537754.1 334144598 10720357 complement(1764342..1764722) 1 NC_015581.1 KEGG: tcx:Tcr_0270 hypothetical protein; hypothetical protein 1764722 10720357 Thicy_1517 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537754.1 1764342 R 717773 CDS YP_004537755.1 334144599 10720358 complement(1764840..1766021) 1 NC_015581.1 KEGG: tcx:Tcr_0194 DNA processing protein DprA, putative; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 1766021 10720358 Thicy_1518 Thioalkalimicrobium cyclicum ALM1 DNA protecting protein DprA YP_004537755.1 1764840 R 717773 CDS YP_004537756.1 334144600 10720359 1766077..1766589 1 NC_015581.1 PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: tcx:Tcr_0193 peptide deformylase; peptide deformylase 1766589 10720359 Thicy_1519 Thioalkalimicrobium cyclicum ALM1 peptide deformylase YP_004537756.1 1766077 D 717773 CDS YP_004537757.1 334144601 10720360 1766589..1767524 1 NC_015581.1 PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: tcx:Tcr_0192 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1767524 10720360 Thicy_1520 Thioalkalimicrobium cyclicum ALM1 methionyl-tRNA formyltransferase YP_004537757.1 1766589 D 717773 CDS YP_004537758.1 334144602 10720361 1767524..1768825 1 NC_015581.1 KEGG: tcx:Tcr_0191 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 1768825 10720361 Thicy_1521 Thioalkalimicrobium cyclicum ALM1 sun protein YP_004537758.1 1767524 D 717773 CDS YP_004537759.1 334144603 10720362 1768791..1769396 1 NC_015581.1 KEGG: tcx:Tcr_0190 hypothetical protein; hypothetical protein 1769396 10720362 Thicy_1522 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537759.1 1768791 D 717773 CDS YP_004537760.1 334144604 10720363 1769397..1771607 1 NC_015581.1 KEGG: tcx:Tcr_0189 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1771607 10720363 Thicy_1523 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537760.1 1769397 D 717773 CDS YP_004537761.1 334144605 10720364 1771607..1772950 1 NC_015581.1 KEGG: tcx:Tcr_0188 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; two component, sigma54 specific, transcriptional regulator, Fis family 1772950 10720364 Thicy_1524 Thioalkalimicrobium cyclicum ALM1 two component, sigma54 specific, transcriptional regulator, Fis family YP_004537761.1 1771607 D 717773 CDS YP_004537762.1 334144606 10720365 1772963..1774363 1 NC_015581.1 PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: tcx:Tcr_0187 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 1774363 10720365 Thicy_1525 Thioalkalimicrobium cyclicum ALM1 TrkA-N domain-containing protein YP_004537762.1 1772963 D 717773 CDS YP_004537763.1 334144607 10720366 1774366..1775817 1 NC_015581.1 KEGG: tcx:Tcr_0186 K+ transporter trk; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter; TrkH family potassium uptake protein 1775817 10720366 Thicy_1526 Thioalkalimicrobium cyclicum ALM1 TrkH family potassium uptake protein YP_004537763.1 1774366 D 717773 CDS YP_004537764.1 334144608 10720367 complement(1775814..1776032) 1 NC_015581.1 KEGG: tcx:Tcr_1959 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein 1776032 10720367 Thicy_1527 Thioalkalimicrobium cyclicum ALM1 cbb3-type cytochrome oxidase maturation protein YP_004537764.1 1775814 R 717773 CDS YP_004537765.1 334144609 10720368 complement(1776034..1778541) 1 NC_015581.1 TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tcx:Tcr_1960 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase 1778541 10720368 Thicy_1528 Thioalkalimicrobium cyclicum ALM1 heavy metal translocating P-type ATPase YP_004537765.1 1776034 R 717773 CDS YP_004537766.1 334144610 10720369 complement(1778545..1779063) 1 NC_015581.1 PFAM: FixH; KEGG: tcx:Tcr_1961 hypothetical protein; FixH family protein 1779063 10720369 Thicy_1529 Thioalkalimicrobium cyclicum ALM1 FixH family protein YP_004537766.1 1778545 R 717773 CDS YP_004537767.1 334144611 10720370 complement(1779090..1780556) 1 NC_015581.1 TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: tcx:Tcr_1962 4Fe-4S ferredoxin, iron-sulfur binding; cytochrome c oxidase accessory protein CcoG 1780556 10720370 Thicy_1530 Thioalkalimicrobium cyclicum ALM1 cytochrome c oxidase accessory protein CcoG YP_004537767.1 1779090 R 717773 CDS YP_004537768.1 334144612 10720371 complement(1780663..1780782) 1 NC_015581.1 hypothetical protein 1780782 10720371 Thicy_1531 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537768.1 1780663 R 717773 CDS YP_004537769.1 334144613 10720372 complement(1780814..1781740) 1 NC_015581.1 PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_1963 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c class I 1781740 10720372 Thicy_1532 Thioalkalimicrobium cyclicum ALM1 cytochrome c class I YP_004537769.1 1780814 R 717773 CDS YP_004537770.1 334144614 10720373 complement(1781762..1781902) 1 NC_015581.1 hypothetical protein 1781902 10720373 Thicy_1533 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537770.1 1781762 R 717773 CDS YP_004537771.1 334144615 10720374 complement(1781937..1782791) 1 NC_015581.1 KEGG: tcx:Tcr_1964 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome C oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; cytochrome c oxidase, cbb3-type subunit II 1782791 10720374 Thicy_1534 Thioalkalimicrobium cyclicum ALM1 cytochrome c oxidase, cbb3-type subunit II YP_004537771.1 1781937 R 717773 CDS YP_004537772.1 334144616 10720375 complement(1782856..1784298) 1 NC_015581.1 TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; KEGG: tcx:Tcr_1965 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase, cbb3-type subunit I 1784298 10720375 Thicy_1535 Thioalkalimicrobium cyclicum ALM1 cytochrome c oxidase, cbb3-type subunit I YP_004537772.1 1782856 R 717773 CDS YP_004537773.1 334144617 10720376 1784675..1785268 1 NC_015581.1 HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: tcx:Tcr_1966 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1785268 10720376 Thicy_1536 Thioalkalimicrobium cyclicum ALM1 imidazoleglycerol-phosphate dehydratase YP_004537773.1 1784675 D 717773 CDS YP_004537774.1 334144618 10720377 1785272..1785919 1 NC_015581.1 TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: tcx:Tcr_1967 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit hisH 1785919 10720377 Thicy_1537 Thioalkalimicrobium cyclicum ALM1 imidazole glycerol phosphate synthase subunit hisH YP_004537774.1 1785272 D 717773 CDS YP_004537775.1 334144619 10720378 1785961..1786707 1 NC_015581.1 PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: tcx:Tcr_1968 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase 1786707 10720378 Thicy_1538 Thioalkalimicrobium cyclicum ALM1 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase YP_004537775.1 1785961 D 717773 CDS YP_004537776.1 334144620 10720379 1786708..1787481 1 NC_015581.1 PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: tcx:Tcr_1969 imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit hisF 1787481 10720379 Thicy_1539 Thioalkalimicrobium cyclicum ALM1 imidazole glycerol phosphate synthase subunit hisF YP_004537776.1 1786708 D 717773 CDS YP_004537777.1 334144621 10720380 1787478..1787801 1 NC_015581.1 TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: tcx:Tcr_1970 phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 1787801 10720380 Thicy_1540 Thioalkalimicrobium cyclicum ALM1 phosphoribosyl-ATP pyrophosphatase YP_004537777.1 1787478 D 717773 CDS YP_004537778.1 334144622 10720381 1787815..1788135 1 NC_015581.1 PFAM: Histidine triad (HIT) protein; KEGG: tcx:Tcr_1971 histidine triad (HIT) protein; histidine triad (HIT) protein 1788135 10720381 Thicy_1541 Thioalkalimicrobium cyclicum ALM1 histidine triad (HIT) protein YP_004537778.1 1787815 D 717773 CDS YP_004537779.1 334144623 10720382 1788193..1788450 1 NC_015581.1 TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: tcx:Tcr_1972 twin arginine-targeting protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase protein tatA/E-like protein 1788450 10720382 Thicy_1542 Thioalkalimicrobium cyclicum ALM1 Sec-independent protein translocase protein tatA/E-like protein YP_004537779.1 1788193 D 717773 CDS YP_004537780.1 334144624 10720383 1788498..1788953 1 NC_015581.1 KEGG: tcx:Tcr_1973 twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase protein tatB-like protein 1788953 10720383 Thicy_1543 Thioalkalimicrobium cyclicum ALM1 Sec-independent protein translocase protein tatB-like protein YP_004537780.1 1788498 D 717773 CDS YP_004537781.1 334144625 10720384 1788960..1789970 1 NC_015581.1 KEGG: tcx:Tcr_1974 sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 1789970 10720384 Thicy_1544 Thioalkalimicrobium cyclicum ALM1 Sec-independent protein translocase subunit TatC YP_004537781.1 1788960 D 717773 CDS YP_004537782.1 334144626 10720385 1789936..1791654 1 NC_015581.1 KEGG: tcx:Tcr_1975 hypothetical protein; hypothetical protein 1791654 10720385 Thicy_1545 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537782.1 1789936 D 717773 CDS YP_004537783.1 334144627 10720386 1791658..1792356 1 NC_015581.1 PFAM: Peptidase, membrane zinc metallopeptidase, putative; KEGG: tcx:Tcr_1976 hypothetical protein; peptidase membrane zinc metallopeptidase 1792356 10720386 Thicy_1546 Thioalkalimicrobium cyclicum ALM1 peptidase membrane zinc metallopeptidase YP_004537783.1 1791658 D 717773 CDS YP_004537784.1 334144628 10720387 1792421..1793278 1 NC_015581.1 KEGG: tcx:Tcr_2134 sigma 32 (RpoH); TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-32 subunit RpoH 1793278 10720387 Thicy_1547 Thioalkalimicrobium cyclicum ALM1 RNA polymerase sigma-32 subunit RpoH YP_004537784.1 1792421 D 717773 CDS YP_004537785.1 334144629 10720388 complement(1793339..1793878) 1 NC_015581.1 PFAM: Calcium/calmodulin-dependent protein kinase II, association-domain; KEGG: tkm:TK90_0874 calcium/calmodulin dependent protein kinase II association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein 1793878 10720388 Thicy_1548 Thioalkalimicrobium cyclicum ALM1 calcium/calmodulin dependent protein kinase II association-domain-containing protein YP_004537785.1 1793339 R 717773 CDS YP_004537786.1 334144630 10720389 complement(1793905..1794531) 1 NC_015581.1 PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0851 hypothetical protein; microcompartments protein 1794531 10720389 Thicy_1549 Thioalkalimicrobium cyclicum ALM1 microcompartments protein YP_004537786.1 1793905 R 717773 CDS YP_004537787.1 334144631 10720390 complement(1794554..1795270) 1 NC_015581.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: pct:PC1_3454 putative deoxyribonucleotide triphosphate pyrophosphatase; nucleoside-triphosphatase rdgB 1795270 10720390 Thicy_1550 Thioalkalimicrobium cyclicum ALM1 nucleoside-triphosphatase rdgB YP_004537787.1 1794554 R 717773 CDS YP_004537788.1 334144632 10720391 complement(1795275..1795823) 1 NC_015581.1 PFAM: Calcium/calmodulin-dependent protein kinase II, association-domain; KEGG: tkm:TK90_0874 calcium/calmodulin dependent protein kinase II association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein 1795823 10720391 Thicy_1551 Thioalkalimicrobium cyclicum ALM1 calcium/calmodulin dependent protein kinase II association-domain-containing protein YP_004537788.1 1795275 R 717773 CDS YP_004537789.1 334144633 10720392 complement(1795883..1796881) 1 NC_015581.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0852 LysR family transcriptional regulator; LysR family transcriptional regulator 1796881 10720392 Thicy_1552 Thioalkalimicrobium cyclicum ALM1 LysR family transcriptional regulator YP_004537789.1 1795883 R 717773 CDS YP_004537790.1 334144634 10720393 complement(1796898..1797218) 1 NC_015581.1 hypothetical protein 1797218 10720393 Thicy_1553 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537790.1 1796898 R 717773 CDS YP_004537791.1 334144635 10720394 complement(1797238..1798218) 1 NC_015581.1 PFAM: Protein of unknown function DUF897; KEGG: chl:Chy400_1931 protein of unknown function DUF897; hypothetical protein 1798218 10720394 Thicy_1554 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537791.1 1797238 R 717773 CDS YP_004537792.1 334144636 10720395 complement(1798346..1799704) 1 NC_015581.1 PFAM: Sulphate transporter; KEGG: tgr:Tgr7_1442 sulphate transporter; sulfate transporter 1799704 10720395 Thicy_1555 Thioalkalimicrobium cyclicum ALM1 sulfate transporter YP_004537792.1 1798346 R 717773 CDS YP_004537793.1 334144637 10720396 complement(1799880..1800125) 1 NC_015581.1 KEGG: tcx:Tcr_0848 hypothetical protein; hypothetical protein 1800125 10720396 Thicy_1556 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537793.1 1799880 R 717773 CDS YP_004537794.1 334144638 10720397 complement(1800122..1800664) 1 NC_015581.1 PFAM: Ferritin/Dps protein; KEGG: tcx:Tcr_0847 rubrerythrin; ferritin Dps family protein 1800664 10720397 Thicy_1557 Thioalkalimicrobium cyclicum ALM1 ferritin Dps family protein YP_004537794.1 1800122 R 717773 CDS YP_004537795.1 334144639 10720398 complement(1800714..1801022) 1 NC_015581.1 PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0846 microcompartments protein; microcompartments protein 1801022 10720398 Thicy_1558 Thioalkalimicrobium cyclicum ALM1 microcompartments protein YP_004537795.1 1800714 R 717773 CDS YP_004537796.1 334144640 10720399 complement(1801098..1801397) 1 NC_015581.1 PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0845 microcompartments protein; microcompartments protein 1801397 10720399 Thicy_1559 Thioalkalimicrobium cyclicum ALM1 microcompartments protein YP_004537796.1 1801098 R 717773 CDS YP_004537797.1 334144641 10720400 complement(1801516..1801776) 1 NC_015581.1 KEGG: tcx:Tcr_0843 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; TIGRFAM: Carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; carboxysome peptide B 1801776 10720400 Thicy_1560 Thioalkalimicrobium cyclicum ALM1 carboxysome peptide B YP_004537797.1 1801516 R 717773 CDS YP_004537798.1 334144642 10720401 complement(1801776..1802024) 1 NC_015581.1 KEGG: tcx:Tcr_0842 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; TIGRFAM: Carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; carboxysome peptide A 1802024 10720401 Thicy_1561 Thioalkalimicrobium cyclicum ALM1 carboxysome peptide A YP_004537798.1 1801776 R 717773 CDS YP_004537799.1 334144643 10720402 complement(1802021..1802797) 1 NC_015581.1 hypothetical protein 1802797 10720402 Thicy_1562 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537799.1 1802021 R 717773 CDS YP_004537800.1 334144644 10720403 complement(1802801..1804954) 1 NC_015581.1 KEGG: sye:Syncc9902_1612 putative carboxysome structural peptide CsoS2; putative carboxysome structural peptide CsoS2 1804954 10720403 Thicy_1563 Thioalkalimicrobium cyclicum ALM1 putative carboxysome structural peptide CsoS2 YP_004537800.1 1802801 R 717773 CDS YP_004537801.1 334144645 10720404 complement(1804988..1805332) 1 NC_015581.1 KEGG: tcx:Tcr_0839 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase 1805332 10720404 Thicy_1564 Thioalkalimicrobium cyclicum ALM1 ribulose-bisphosphate carboxylase YP_004537801.1 1804988 R 717773 CDS YP_004537802.1 334144646 10720405 complement(1805368..1806780) 1 NC_015581.1 HAMAP: Ribulose bisphosphate carboxylase large chain; KEGG: tcx:Tcr_0838 ribulose bisophosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose bisphosphate carboxylase large chain 1806780 10720405 Thicy_1565 Thioalkalimicrobium cyclicum ALM1 ribulose bisphosphate carboxylase large chain YP_004537802.1 1805368 R 717773 CDS YP_004537803.1 334144647 10720406 complement(1806963..1807334) 1 NC_015581.1 PFAM: Invasion gene expression up-regulator, SirB; KEGG: pol:Bpro_4728 invasion gene expression up-regulator, SirB; Invasion gene expression up-regulator SirB 1807334 10720406 Thicy_1566 Thioalkalimicrobium cyclicum ALM1 Invasion gene expression up-regulator SirB YP_004537803.1 1806963 R 717773 CDS YP_004537804.1 334144648 10720407 complement(1807354..1808286) 1 NC_015581.1 KEGG: tcx:Tcr_1981 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC 1808286 10720407 Thicy_1567 Thioalkalimicrobium cyclicum ALM1 biotin biosynthesis protein BioC YP_004537804.1 1807354 R 717773 CDS YP_004537805.1 334144649 10720408 complement(1808279..1809073) 1 NC_015581.1 KEGG: tcx:Tcr_1980 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; carboxylesterase 1809073 10720408 Thicy_1568 Thioalkalimicrobium cyclicum ALM1 carboxylesterase YP_004537805.1 1808279 R 717773 CDS YP_004537806.1 334144650 10720409 1809277..1809486 1 NC_015581.1 KEGG: tcx:Tcr_1862 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1809486 10720409 Thicy_1569 Thioalkalimicrobium cyclicum ALM1 cold-shock DNA-binding domain-containing protein YP_004537806.1 1809277 D 717773 CDS YP_004537807.1 334144651 10720410 1809594..1810088 1 NC_015581.1 KEGG: tcx:Tcr_0547 hypothetical protein; hypothetical protein 1810088 10720410 Thicy_1570 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537807.1 1809594 D 717773 CDS YP_004537808.1 334144652 10720411 complement(1810075..1811232) 1 NC_015581.1 PFAM: Aminotransferase, class I/II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: tcx:Tcr_1979 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 1811232 10720411 Thicy_1571 Thioalkalimicrobium cyclicum ALM1 8-amino-7-oxononanoate synthase YP_004537808.1 1810075 R 717773 CDS YP_004537809.1 334144653 10720412 complement(1811253..1812305) 1 NC_015581.1 KEGG: tcx:Tcr_1978 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1812305 10720412 Thicy_1572 Thioalkalimicrobium cyclicum ALM1 biotin synthase YP_004537809.1 1811253 R 717773 CDS YP_004537810.1 334144654 10720413 1812316..1813002 1 NC_015581.1 PFAM: Phosphoribosyltransferase; KEGG: tcx:Tcr_1977 hypothetical protein; phosphoribosyltransferase 1813002 10720413 Thicy_1573 Thioalkalimicrobium cyclicum ALM1 phosphoribosyltransferase YP_004537810.1 1812316 D 717773 CDS YP_004537811.1 334144655 10720414 1813058..1814191 1 NC_015581.1 TIGRFAM: Glycerate kinase; KEGG: tcx:Tcr_0775 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 1814191 10720414 Thicy_1574 Thioalkalimicrobium cyclicum ALM1 glycerate kinase YP_004537811.1 1813058 D 717773 CDS YP_004537812.1 334144656 10720415 complement(1814224..1816044) 1 NC_015581.1 PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: tcx:Tcr_0774 alpha amylase, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; sucrose phosphorylase 1816044 10720415 Thicy_1575 Thioalkalimicrobium cyclicum ALM1 sucrose phosphorylase YP_004537812.1 1814224 R 717773 CDS YP_004537813.1 334144657 10720416 complement(1816060..1817271) 1 NC_015581.1 KEGG: tcx:Tcr_0773 hypothetical protein; hypothetical protein 1817271 10720416 Thicy_1576 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537813.1 1816060 R 717773 CDS YP_004537814.1 334144658 10720417 complement(1817268..1818050) 1 NC_015581.1 KEGG: tcx:Tcr_0772 HAD family hydrolase YedP; TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3; mannosyl-3-phosphoglycerate phosphatase family protein 1818050 10720417 Thicy_1577 Thioalkalimicrobium cyclicum ALM1 mannosyl-3-phosphoglycerate phosphatase family protein YP_004537814.1 1817268 R 717773 CDS YP_004537815.1 334144659 10720418 complement(1818130..1820310) 1 NC_015581.1 PFAM: DNA helicase, UvrD/REP type; KEGG: tcx:Tcr_0128 DNA-dependent helicase II; UvrD/REP helicase 1820310 10720418 Thicy_1578 Thioalkalimicrobium cyclicum ALM1 UvrD/REP helicase YP_004537815.1 1818130 R 717773 CDS YP_004537816.1 334144660 10720419 1820612..1820938 1 NC_015581.1 KEGG: tcx:Tcr_0127 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1820938 10720419 Thicy_1579 Thioalkalimicrobium cyclicum ALM1 thioredoxin YP_004537816.1 1820612 D 717773 CDS YP_004537817.1 334144661 10720420 1821051..1822307 1 NC_015581.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: tcx:Tcr_0126 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1822307 10720420 Thicy_1580 Thioalkalimicrobium cyclicum ALM1 transcription termination factor Rho YP_004537817.1 1821051 D 717773 CDS YP_004537818.1 334144662 10720421 1822397..1822648 1 NC_015581.1 TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: tcx:Tcr_0125 ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1822648 10720421 Thicy_1581 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L31 YP_004537818.1 1822397 D 717773 CDS YP_004537819.1 334144663 10720422 1822841..1823902 1 NC_015581.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: tcx:Tcr_0123 uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 1823902 10720422 Thicy_1582 Thioalkalimicrobium cyclicum ALM1 uroporphyrinogen decarboxylase YP_004537819.1 1822841 D 717773 CDS YP_004537820.1 334144664 10720423 complement(1823970..1824239) 1 NC_015581.1 KEGG: tcx:Tcr_0121 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX; Fe(2+)-trafficking protein 1824239 10720423 Thicy_1583 Thioalkalimicrobium cyclicum ALM1 Fe(2+)-trafficking protein YP_004537820.1 1823970 R 717773 CDS YP_004537821.1 334144665 10720424 complement(1824264..1825370) 1 NC_015581.1 TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: tcx:Tcr_0120 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; A/G-specific adenine glycosylase 1825370 10720424 Thicy_1584 Thioalkalimicrobium cyclicum ALM1 A/G-specific adenine glycosylase YP_004537821.1 1824264 R 717773 CDS YP_004537822.1 334144666 10720425 1825446..1826195 1 NC_015581.1 TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: tcx:Tcr_0119 hypothetical protein; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1826195 10720425 Thicy_1585 Thioalkalimicrobium cyclicum ALM1 tRNA (guanine-N(7)-)-methyltransferase YP_004537822.1 1825446 D 717773 CDS YP_004537823.1 334144667 10720426 1826277..1829084 1 NC_015581.1 TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: tcx:Tcr_0044 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; DNA polymerase I 1829084 10720426 Thicy_1586 Thioalkalimicrobium cyclicum ALM1 DNA polymerase I YP_004537823.1 1826277 D 717773 CDS YP_004537824.1 334144668 10720427 complement(1829155..1829820) 1 NC_015581.1 KEGG: tin:Tint_0548 hypothetical protein; hypothetical protein 1829820 10720427 Thicy_1587 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537824.1 1829155 R 717773 CDS YP_004537825.1 334144669 10720428 complement(1829926..1830834) 1 NC_015581.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_0183 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1830834 10720428 Thicy_1588 Thioalkalimicrobium cyclicum ALM1 lipid A biosynthesis acyltransferase YP_004537825.1 1829926 R 717773 CDS YP_004537826.1 334144670 10720429 complement(1830827..1831594) 1 NC_015581.1 PFAM: PP-loop; KEGG: tcx:Tcr_0182 PP-loop; PP-loop domain-containing protein 1831594 10720429 Thicy_1589 Thioalkalimicrobium cyclicum ALM1 PP-loop domain-containing protein YP_004537826.1 1830827 R 717773 CDS YP_004537827.1 334144671 10720430 complement(1831676..1832776) 1 NC_015581.1 TIGRFAM: tRNA (uracil-5-)-methyltransferase; HAMAP: tRNA (uracil-5-)-methyltransferase; KEGG: tcx:Tcr_0173 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; tRNA (uracil-5-)-methyltransferase 1832776 10720430 Thicy_1590 Thioalkalimicrobium cyclicum ALM1 tRNA (uracil-5-)-methyltransferase YP_004537827.1 1831676 R 717773 CDS YP_004537828.1 334144672 10720432 1835067..1835462 1 NC_015581.1 KEGG: avn:Avin_24460 hypothetical protein; hypothetical protein 1835462 10720432 Thicy_1592 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537828.1 1835067 D 717773 CDS YP_004537829.1 334144673 10720433 1835518..1835748 1 NC_015581.1 KEGG: amc:MADE_01196 helix-turn-helix protein, CopG; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985; addiction module antidote protein 1835748 10720433 Thicy_1593 Thioalkalimicrobium cyclicum ALM1 addiction module antidote protein YP_004537829.1 1835518 D 717773 CDS YP_004537830.1 334144674 10720434 1835745..1836044 1 NC_015581.1 PFAM: Plasmid stabilisation system; KEGG: bge:BC1002_5717 plasmid stabilization system; plasmid stabilization system 1836044 10720434 Thicy_1594 Thioalkalimicrobium cyclicum ALM1 plasmid stabilization system YP_004537830.1 1835745 D 717773 CDS YP_004537831.1 334144675 10720435 1836501..1838378 1 NC_015581.1 TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: tcx:Tcr_0148 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase 1838378 10720435 Thicy_1595 Thioalkalimicrobium cyclicum ALM1 phosphomethylpyrimidine synthase YP_004537831.1 1836501 D 717773 CDS YP_004537832.1 334144676 10720436 1838392..1839435 1 NC_015581.1 PFAM: FAD dependent oxidoreductase; KEGG: tcx:Tcr_0147 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1839435 10720436 Thicy_1596 Thioalkalimicrobium cyclicum ALM1 FAD dependent oxidoreductase YP_004537832.1 1838392 D 717773 CDS YP_004537833.1 334144677 10720437 1839553..1839747 1 NC_015581.1 KEGG: bbt:BBta_6223 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS 1839747 10720437 Thicy_1597 Thioalkalimicrobium cyclicum ALM1 thiamine biosynthesis protein ThiS YP_004537833.1 1839553 D 717773 CDS YP_004537834.1 334144678 10720438 1839907..1840716 1 NC_015581.1 KEGG: sun:SUN_0529 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; thiazole synthase 1840716 10720438 Thicy_1598 Thioalkalimicrobium cyclicum ALM1 thiazole synthase YP_004537834.1 1839907 D 717773 CDS YP_004537835.1 334144679 10720439 1840800..1841432 1 NC_015581.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hde:HDEF_1038 plasmid partition protein ParA-like protein; Cobyrinic acid ac-diamide synthase 1841432 10720439 Thicy_1599 Thioalkalimicrobium cyclicum ALM1 Cobyrinic acid ac-diamide synthase YP_004537835.1 1840800 D 717773 CDS YP_004537836.1 334144680 10720440 1841422..1841685 1 NC_015581.1 hypothetical protein 1841685 10720440 Thicy_1600 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537836.1 1841422 D 717773 CDS YP_004537837.1 334144681 10720441 1841721..1842224 1 NC_015581.1 KEGG: cpc:Cpar_1318 thiol peroxidase; HAMAP: thiol peroxidase; PFAM: Redoxin; thiol peroxidase 1842224 10720441 Thicy_1601 Thioalkalimicrobium cyclicum ALM1 thiol peroxidase YP_004537837.1 1841721 D 717773 CDS YP_004537838.1 334144682 10720442 1842306..1842740 1 NC_015581.1 PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: swp:swp_3689 hypothetical protein; hypothetical protein 1842740 10720442 Thicy_1602 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537838.1 1842306 D 717773 CDS YP_004537839.1 334144683 10720443 complement(1842745..1843596) 1 NC_015581.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: tcx:Tcr_2161 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase 1843596 10720443 Thicy_1603 Thioalkalimicrobium cyclicum ALM1 4-hydroxybenzoate octaprenyltransferase YP_004537839.1 1842745 R 717773 CDS YP_004537840.1 334144684 10720444 complement(1843604..1843849) 1 NC_015581.1 hypothetical protein 1843849 10720444 Thicy_1604 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537840.1 1843604 R 717773 CDS YP_004537841.1 334144685 10720445 complement(1843862..1845247) 1 NC_015581.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: tcx:Tcr_2163 UDP-N-acetylglucosamine pyrophosphorylase; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1845247 10720445 Thicy_1605 Thioalkalimicrobium cyclicum ALM1 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_004537841.1 1843862 R 717773 CDS YP_004537842.1 334144686 10720446 complement(1845379..1845813) 1 NC_015581.1 TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: tcx:Tcr_2164 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase subunit epsilon 1845813 10720446 Thicy_1606 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit epsilon YP_004537842.1 1845379 R 717773 CDS YP_004537843.1 334144687 10720447 complement(1845820..1847199) 1 NC_015581.1 TIGRFAM: ATPase, F1 complex, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; KEGG: tcx:Tcr_2165 F0F1 ATP synthase subunit beta; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta 1847199 10720447 Thicy_1607 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit beta YP_004537843.1 1845820 R 717773 CDS YP_004537844.1 334144688 10720448 complement(1847231..1848097) 1 NC_015581.1 TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: tcx:Tcr_2166 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 1848097 10720448 Thicy_1608 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit gamma YP_004537844.1 1847231 R 717773 CDS YP_004537845.1 334144689 10720449 complement(1848110..1849651) 1 NC_015581.1 TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: tcx:Tcr_2167 ATP synthase F1, alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha 1849651 10720449 Thicy_1609 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit alpha YP_004537845.1 1848110 R 717773 CDS YP_004537846.1 334144690 10720450 complement(1849667..1850206) 1 NC_015581.1 TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: tcx:Tcr_2168 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 1850206 10720450 Thicy_1610 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit delta YP_004537846.1 1849667 R 717773 CDS YP_004537847.1 334144691 10720451 complement(1850219..1850689) 1 NC_015581.1 TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: tcx:Tcr_2169 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b 1850689 10720451 Thicy_1611 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit b YP_004537847.1 1850219 R 717773 CDS YP_004537848.1 334144692 10720452 complement(1850740..1851030) 1 NC_015581.1 TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: tcx:Tcr_2170 ATP synthase F0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c 1851030 10720452 Thicy_1612 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit c YP_004537848.1 1850740 R 717773 CDS YP_004537849.1 334144693 10720453 complement(1851141..1851956) 1 NC_015581.1 TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: tcx:Tcr_2171 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 1851956 10720453 Thicy_1613 Thioalkalimicrobium cyclicum ALM1 ATP synthase subunit a YP_004537849.1 1851141 R 717773 CDS YP_004537850.1 334144694 10720454 complement(1851968..1852330) 1 NC_015581.1 KEGG: tcx:Tcr_2172 hypothetical protein; hypothetical protein 1852330 10720454 Thicy_1614 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537850.1 1851968 R 717773 CDS YP_004537851.1 334144695 10720455 complement(1852323..1852604) 1 NC_015581.1 KEGG: tcx:Tcr_2173 hypothetical protein; hypothetical protein 1852604 10720455 Thicy_1615 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537851.1 1852323 R 717773 CDS YP_004537852.1 334144696 10720456 complement(1852785..1853657) 1 NC_015581.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: tcx:Tcr_2174 ParB-like partition proteins; SMART: ParB-like nuclease; parB-like partition protein 1853657 10720456 Thicy_1616 Thioalkalimicrobium cyclicum ALM1 parB-like partition protein YP_004537852.1 1852785 R 717773 CDS YP_004537853.1 334144697 10720457 complement(1853670..1854437) 1 NC_015581.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tcx:Tcr_2175 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1854437 10720457 Thicy_1617 Thioalkalimicrobium cyclicum ALM1 Cobyrinic acid ac-diamide synthase YP_004537853.1 1853670 R 717773 CDS YP_004537854.1 334144698 10720458 complement(1854437..1855069) 1 NC_015581.1 TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: tcx:Tcr_2176 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; Ribosomal RNA small subunit methyltransferase G 1855069 10720458 Thicy_1618 Thioalkalimicrobium cyclicum ALM1 Ribosomal RNA small subunit methyltransferase G YP_004537854.1 1854437 R 717773 CDS YP_004537855.1 334144699 10720459 complement(1855066..1856994) 1 NC_015581.1 TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: tcx:Tcr_2177 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 1856994 10720459 Thicy_1619 Thioalkalimicrobium cyclicum ALM1 tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG YP_004537855.1 1855066 R 717773 CDS YP_004537856.1 334144700 10720460 1857178..1857723 1 NC_015581.1 KEGG: tcx:Tcr_2178 hypothetical protein; hypothetical protein 1857723 10720460 Thicy_1620 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537856.1 1857178 D 717773 CDS YP_004537857.1 334144701 10720461 complement(1857697..1860222) 1 NC_015581.1 SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; manually curated; TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; KEGG: tcx:Tcr_0554 ATP-dependent helicase HrpB; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; ATP-dependent helicase HrpB 1860222 10720461 Thicy_1621 Thioalkalimicrobium cyclicum ALM1 ATP-dependent helicase HrpB YP_004537857.1 1857697 R 717773 CDS YP_004537858.1 334144702 10720462 complement(1860224..1862155) 1 NC_015581.1 PFAM: Protein of unknown function DUF945, bacterial; KEGG: mmr:Mmar10_0126 hypothetical protein; hypothetical protein 1862155 10720462 Thicy_1622 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537858.1 1860224 R 717773 CDS YP_004537859.1 334144703 10720463 1862273..1862878 1 NC_015581.1 PFAM: Flavin reductase-like, FMN-binding; KEGG: psm:PSM_A0942 hypothetical protein; flavin reductase domain-containing FMN-binding protein 1862878 10720463 Thicy_1623 Thioalkalimicrobium cyclicum ALM1 flavin reductase domain-containing FMN-binding protein YP_004537859.1 1862273 D 717773 CDS YP_004537860.1 334144704 10720464 complement(1862905..1863747) 1 NC_015581.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; HAMAP: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: tcx:Tcr_2191 7-cyano-7-deazaguanine reductase; NADPH-dependent 7-cyano-7-deazaguanine reductase 1863747 10720464 Thicy_1624 Thioalkalimicrobium cyclicum ALM1 NADPH-dependent 7-cyano-7-deazaguanine reductase YP_004537860.1 1862905 R 717773 CDS YP_004537861.1 334144705 10720465 complement(1864128..1866200) 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tgr:Tgr7_0865 TonB-dependent receptor; TonB-dependent receptor 1866200 10720465 Thicy_1625 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004537861.1 1864128 R 717773 CDS YP_004537862.1 334144706 10720466 complement(1866277..1866552) 1 NC_015581.1 KEGG: svo:SVI_2174 hypothetical protein; hypothetical protein 1866552 10720466 Thicy_1626 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537862.1 1866277 R 717773 CDS YP_004537863.1 334144707 10720467 complement(1866562..1866717) 1 NC_015581.1 PFAM: Hemin uptake protein hemP; hemin uptake protein HemP 1866717 10720467 Thicy_1627 Thioalkalimicrobium cyclicum ALM1 hemin uptake protein HemP YP_004537863.1 1866562 R 717773 CDS YP_004537864.1 334144708 10720468 complement(1866936..1868117) 1 NC_015581.1 PFAM: HemY, N-terminal; KEGG: tcx:Tcr_0115 HemY-like; HemY domain-containing protein 1868117 10720468 Thicy_1628 Thioalkalimicrobium cyclicum ALM1 HemY domain-containing protein YP_004537864.1 1866936 R 717773 CDS YP_004537865.1 334144709 10720469 complement(1868114..1869088) 1 NC_015581.1 KEGG: cyj:Cyan7822_3081 BRCT domain-containing protein; hypothetical protein 1869088 10720469 Thicy_1629 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537865.1 1868114 R 717773 CDS YP_004537866.1 334144710 10720470 complement(1869085..1869909) 1 NC_015581.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: son:SO_4314 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 1869909 10720470 Thicy_1630 Thioalkalimicrobium cyclicum ALM1 uroporphyrinogen III synthase HEM4 YP_004537866.1 1869085 R 717773 CDS YP_004537867.1 334144711 10720471 complement(1869923..1870858) 1 NC_015581.1 TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: tcx:Tcr_0112 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 1870858 10720471 Thicy_1631 Thioalkalimicrobium cyclicum ALM1 porphobilinogen deaminase YP_004537867.1 1869923 R 717773 CDS YP_004537868.1 334144712 10720472 1870955..1871482 1 NC_015581.1 KEGG: tcx:Tcr_0111 hypothetical protein; hypothetical protein 1871482 10720472 Thicy_1632 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537868.1 1870955 D 717773 CDS YP_004537869.1 334144713 10720473 1871501..1872895 1 NC_015581.1 PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: tcx:Tcr_0110 argininosuccinate lyase; argininosuccinate lyase 1872895 10720473 Thicy_1633 Thioalkalimicrobium cyclicum ALM1 argininosuccinate lyase YP_004537869.1 1871501 D 717773 CDS YP_004537870.1 334144714 10720474 complement(1872906..1874738) 1 NC_015581.1 PFAM: Na/Pi-cotransporter; KEGG: aeh:Mlg_2701 Na+/Pi-cotransporter; Na+/Picotransporter 1874738 10720474 Thicy_1634 Thioalkalimicrobium cyclicum ALM1 Na+/Picotransporter YP_004537870.1 1872906 R 717773 CDS YP_004537871.1 334144715 10720475 complement(1874735..1876918) 1 NC_015581.1 PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; KEGG: tcx:Tcr_0070 AMP-dependent synthetase and ligase; SMART: Phospholipid/glycerol acyltransferase; acyl-ACP--phospholipid O-acyltransferase 1876918 10720475 Thicy_1635 Thioalkalimicrobium cyclicum ALM1 acyl-ACP--phospholipid O-acyltransferase YP_004537871.1 1874735 R 717773 CDS YP_004537872.1 334144716 10720476 complement(1876915..1878198) 1 NC_015581.1 PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0069 major facilitator transporter; major facilitator superfamily protein 1878198 10720476 Thicy_1636 Thioalkalimicrobium cyclicum ALM1 major facilitator superfamily protein YP_004537872.1 1876915 R 717773 CDS YP_004537873.1 334144717 10720477 complement(1878231..1879886) 1 NC_015581.1 KEGG: dar:Daro_4086 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; histidine kinase 1879886 10720477 Thicy_1637 Thioalkalimicrobium cyclicum ALM1 histidine kinase YP_004537873.1 1878231 R 717773 CDS YP_004537874.1 334144718 10720478 complement(1879879..1881003) 1 NC_015581.1 PFAM: FIST domain, N-terminal; FIST C domain; KEGG: dsa:Desal_3758 domain of unknown function DUF1745; hypothetical protein 1881003 10720478 Thicy_1638 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537874.1 1879879 R 717773 CDS YP_004537875.1 334144719 10720479 1881184..1881672 1 NC_015581.1 KEGG: vfm:VFMJ11_0119 transcription elongation factor GreB; TIGRFAM: Transcription elongation factor GreB, prokaryotic; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreB 1881672 10720479 Thicy_1639 Thioalkalimicrobium cyclicum ALM1 transcription elongation factor GreB YP_004537875.1 1881184 D 717773 CDS YP_004537876.1 334144720 10720480 complement(1881699..1883738) 1 NC_015581.1 KEGG: tcx:Tcr_0067 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; oligopeptidase A 1883738 10720480 Thicy_1640 Thioalkalimicrobium cyclicum ALM1 oligopeptidase A YP_004537876.1 1881699 R 717773 CDS YP_004537877.1 334144721 10720481 1883892..1884419 1 NC_015581.1 KEGG: tcx:Tcr_0108 adenine phosphoribosyltransferase; HAMAP: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 1884419 10720481 Thicy_1641 Thioalkalimicrobium cyclicum ALM1 adenine phosphoribosyltransferase YP_004537877.1 1883892 D 717773 CDS YP_004537878.1 334144722 10720482 complement(1884466..1885254) 1 NC_015581.1 PFAM: Protein of unknown function DUF81; KEGG: tcx:Tcr_2201 hypothetical protein; hypothetical protein 1885254 10720482 Thicy_1642 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537878.1 1884466 R 717773 CDS YP_004537879.1 334144723 10720483 complement(1885325..1887001) 1 NC_015581.1 TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: tcx:Tcr_2197 60 kDa inner membrane insertion protein; PFAM: Membrane insertion protein, OxaA/YidC; membrane protein oxaA 1887001 10720483 Thicy_1643 Thioalkalimicrobium cyclicum ALM1 membrane protein oxaA YP_004537879.1 1885325 R 717773 CDS YP_004537880.1 334144724 10720484 complement(1886998..1887435) 1 NC_015581.1 TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: tcx:Tcr_2198 ribonuclease P protein component; PFAM: Ribonuclease P; Ribonuclease P protein component 1887435 10720484 Thicy_1644 Thioalkalimicrobium cyclicum ALM1 Ribonuclease P protein component YP_004537880.1 1886998 R 717773 CDS YP_004537881.1 334144725 10720485 complement(1887444..1887578) 1 NC_015581.1 TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: pmr:PMI3131 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 1887578 10720485 Thicy_1645 Thioalkalimicrobium cyclicum ALM1 50S ribosomal protein L34 YP_004537881.1 1887444 R 717773 CDS YP_004537882.1 334144726 10720486 1887703..1888836 1 NC_015581.1 TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: tcx:Tcr_0003 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal; DNA replication and repair protein RecF 1888836 10720486 Thicy_1646 Thioalkalimicrobium cyclicum ALM1 DNA replication and repair protein RecF YP_004537882.1 1887703 D 717773 CDS YP_004537883.1 334144727 10720487 1888908..1891343 1 NC_015581.1 SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: tcx:Tcr_0012 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 1891343 10720487 Thicy_1647 Thioalkalimicrobium cyclicum ALM1 DNA gyrase subunit B YP_004537883.1 1888908 D 717773 CDS YP_004537884.1 334144728 10720488 1891409..1892341 1 NC_015581.1 KEGG: tcx:Tcr_0013 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase; phosphoribulokinase 1892341 10720488 Thicy_1648 Thioalkalimicrobium cyclicum ALM1 phosphoribulokinase YP_004537884.1 1891409 D 717773 CDS YP_004537885.1 334144729 10720489 1892486..1893058 1 NC_015581.1 hypothetical protein 1893058 10720489 Thicy_1649 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537885.1 1892486 D 717773 CDS YP_004537886.1 334144730 10720490 1893055..1894728 1 NC_015581.1 KEGG: dsa:Desal_1367 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1894728 10720490 Thicy_1650 Thioalkalimicrobium cyclicum ALM1 integral membrane sensor signal transduction histidine kinase YP_004537886.1 1893055 D 717773 CDS YP_004537887.1 334144731 10720491 complement(1894682..1895071) 1 NC_015581.1 KEGG: tcx:Tcr_0016 RNA-binding S4; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein 1895071 10720491 Thicy_1651 Thioalkalimicrobium cyclicum ALM1 RNA-binding S4 domain-containing protein YP_004537887.1 1894682 R 717773 CDS YP_004537888.1 334144732 10720492 complement(1895076..1896026) 1 NC_015581.1 HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: tcx:Tcr_0017 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; coproporphyrinogen-III oxidase, aerobic 1896026 10720492 Thicy_1652 Thioalkalimicrobium cyclicum ALM1 coproporphyrinogen-III oxidase, aerobic YP_004537888.1 1895076 R 717773 CDS YP_004537889.1 334144733 10720493 1896160..1896993 1 NC_015581.1 PFAM: Peptidase M48, Ste24p; KEGG: tcx:Tcr_0018 peptidase M48, Ste24p; peptidase M48 Ste24p 1896993 10720493 Thicy_1653 Thioalkalimicrobium cyclicum ALM1 peptidase M48 Ste24p YP_004537889.1 1896160 D 717773 CDS YP_004537890.1 334144734 10720494 complement(1896997..1897617) 1 NC_015581.1 TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: tcx:Tcr_0047 GTP-binding protein, HSR1-related; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engB 1897617 10720494 Thicy_1654 Thioalkalimicrobium cyclicum ALM1 GTP-binding protein engB YP_004537890.1 1896997 R 717773 CDS YP_004537891.1 334144735 10720495 1897706..1899718 1 NC_015581.1 PFAM: ResB-like; KEGG: tcx:Tcr_0048 ResB-like; ResB family protein 1899718 10720495 Thicy_1655 Thioalkalimicrobium cyclicum ALM1 ResB family protein YP_004537891.1 1897706 D 717773 CDS YP_004537892.1 334144736 10720496 1899731..1900924 1 NC_015581.1 KEGG: tcx:Tcr_0049 cytochrome c assembly protein; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 1900924 10720496 Thicy_1656 Thioalkalimicrobium cyclicum ALM1 cytochrome c-type biogenesis protein CcsB YP_004537892.1 1899731 D 717773 CDS YP_004537893.1 334144737 10720497 1900924..1901568 1 NC_015581.1 PFAM: DSBA oxidoreductase; KEGG: tcx:Tcr_0050 DsbA oxidoreductase; DSBA oxidoreductase 1901568 10720497 Thicy_1657 Thioalkalimicrobium cyclicum ALM1 DSBA oxidoreductase YP_004537893.1 1900924 D 717773 CDS YP_004537894.1 334144738 10720498 1901594..1903237 1 NC_015581.1 KEGG: tcx:Tcr_0051 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 1903237 10720498 Thicy_1658 Thioalkalimicrobium cyclicum ALM1 acetolactate synthase YP_004537894.1 1901594 D 717773 CDS YP_004537895.1 334144739 10720499 complement(1903234..1903800) 1 NC_015581.1 PFAM: Nitroreductase-like; KEGG: tcx:Tcr_0053 nitroreductase; nitroreductase 1903800 10720499 Thicy_1659 Thioalkalimicrobium cyclicum ALM1 nitroreductase YP_004537895.1 1903234 R 717773 CDS YP_004537896.1 334144740 10720500 1904059..1904961 1 NC_015581.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0054 LysR family transcriptional regulator; LysR family transcriptional regulator 1904961 10720500 Thicy_1660 Thioalkalimicrobium cyclicum ALM1 LysR family transcriptional regulator YP_004537896.1 1904059 D 717773 CDS YP_004537897.1 334144741 10720501 1904961..1905770 1 NC_015581.1 PFAM: VacJ-like lipoprotein; KEGG: tcx:Tcr_0055 VacJ-like lipoprotein; VacJ family lipoprotein 1905770 10720501 Thicy_1661 Thioalkalimicrobium cyclicum ALM1 VacJ family lipoprotein YP_004537897.1 1904961 D 717773 CDS YP_004537898.1 334144742 10720502 1905751..1907124 1 NC_015581.1 TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: tcx:Tcr_2195 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; tRNA modification GTPase mnmE 1907124 10720502 Thicy_1662 Thioalkalimicrobium cyclicum ALM1 tRNA modification GTPase mnmE YP_004537898.1 1905751 D 717773 CDS YP_004537899.1 334144743 10720503 1907140..1909101 1 NC_015581.1 KEGG: tcx:Tcr_1337 choline/carnitine/betaine transport; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter 1909101 10720503 Thicy_1663 Thioalkalimicrobium cyclicum ALM1 choline/carnitine/betaine transporter YP_004537899.1 1907140 D 717773 CDS YP_004537900.1 334144744 10720504 1909140..1909661 1 NC_015581.1 PFAM: Sua5/YciO/YrdC, N-terminal; KEGG: dda:Dd703_0443 SUA5/YciO/YrdC domain protein; SUA5/yciO/yrdC domain-containing protein 1909661 10720504 Thicy_1664 Thioalkalimicrobium cyclicum ALM1 SUA5/yciO/yrdC domain-containing protein YP_004537900.1 1909140 D 717773 CDS YP_004537901.1 334144745 10720505 complement(1909668..1911290) 1 NC_015581.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_0315 iron ABC transporter, permease protein; ABC transporter permease 1911290 10720505 Thicy_1665 Thioalkalimicrobium cyclicum ALM1 ABC transporter permease YP_004537901.1 1909668 R 717773 CDS YP_004537902.1 334144746 10720506 complement(1911321..1912355) 1 NC_015581.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rma:Rmag_0706 extracellular solute-binding protein; extracellular solute-binding protein 1912355 10720506 Thicy_1666 Thioalkalimicrobium cyclicum ALM1 extracellular solute-binding protein YP_004537902.1 1911321 R 717773 CDS YP_004537903.1 334144747 10720507 complement(1912439..1913101) 1 NC_015581.1 PFAM: ABC transporter-like; KEGG: ABC transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase 1913101 10720507 Thicy_1667 Thioalkalimicrobium cyclicum ALM1 Fe(3+)-transporting ATPase YP_004537903.1 1912439 R 717773 CDS YP_004537904.1 334144748 10720508 complement(1913234..1914850) 1 NC_015581.1 KEGG: tcx:Tcr_0071 hypothetical protein; hypothetical protein 1914850 10720508 Thicy_1668 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537904.1 1913234 R 717773 CDS YP_004537905.1 334144749 10720509 complement(1914844..1916790) 1 NC_015581.1 KEGG: tcx:Tcr_0072 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; von Willebrand factor, type A; SMART: Tetratricopeptide repeat; hypothetical protein 1916790 10720509 Thicy_1669 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537905.1 1914844 R 717773 CDS YP_004537906.1 334144750 10720510 complement(1916783..1917817) 1 NC_015581.1 KEGG: tcx:Tcr_0073 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A 1917817 10720510 Thicy_1670 Thioalkalimicrobium cyclicum ALM1 von Willebrand factor type A YP_004537906.1 1916783 R 717773 CDS YP_004537907.1 334144751 10720511 complement(1917814..1918302) 1 NC_015581.1 KEGG: tcx:Tcr_0074 hypothetical protein; hypothetical protein 1918302 10720511 Thicy_1671 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537907.1 1917814 R 717773 CDS YP_004537908.1 334144752 10720512 complement(1918299..1919222) 1 NC_015581.1 PFAM: Protein of unknown function DUF58; KEGG: tcx:Tcr_0075 hypothetical protein; hypothetical protein 1919222 10720512 Thicy_1672 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537908.1 1918299 R 717773 CDS YP_004537909.1 334144753 10720513 complement(1919224..1920192) 1 NC_015581.1 PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: sde:Sde_1747 MoxR-like ATPase; ATPase 1920192 10720513 Thicy_1673 Thioalkalimicrobium cyclicum ALM1 ATPase YP_004537909.1 1919224 R 717773 CDS YP_004537910.1 334144754 10720514 complement(1920278..1921282) 1 NC_015581.1 TIGRFAM: tRNA (mo5U34)-methyltransferase; HAMAP: tRNA (mo5U34)-methyltransferase; KEGG: tcx:Tcr_0078 methyltransferase, putative; PFAM: tRNA (mo5U34)-methyltransferase; tRNA (mo5U34)-methyltransferase 1921282 10720514 Thicy_1674 Thioalkalimicrobium cyclicum ALM1 tRNA (mo5U34)-methyltransferase YP_004537910.1 1920278 R 717773 CDS YP_004537911.1 334144755 10720515 complement(1921291..1922025) 1 NC_015581.1 TIGRFAM: tRNA (cmo5U34)-methyltransferase; HAMAP: tRNA (cmo5U34)-methyltransferase; KEGG: tcx:Tcr_0079 methyltransferase; PFAM: Methyltransferase type 12; tRNA (cmo5U34)-methyltransferase 1922025 10720515 Thicy_1675 Thioalkalimicrobium cyclicum ALM1 tRNA (cmo5U34)-methyltransferase YP_004537911.1 1921291 R 717773 CDS YP_004537912.1 334144756 10720516 complement(1922108..1923016) 1 NC_015581.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: svo:SVI_3483 LysR family transcriptional regulator; LysR family transcriptional regulator 1923016 10720516 Thicy_1676 Thioalkalimicrobium cyclicum ALM1 LysR family transcriptional regulator YP_004537912.1 1922108 R 717773 CDS YP_004537913.1 334144757 10720517 1923117..1923812 1 NC_015581.1 PFAM: Pirin, N-terminal; KEGG: apa:APP7_1553 hypothetical protein; Pirin domain-containing protein 1923812 10720517 Thicy_1677 Thioalkalimicrobium cyclicum ALM1 Pirin domain-containing protein YP_004537913.1 1923117 D 717773 CDS YP_004537914.1 334144758 10720518 1923850..1924383 1 NC_015581.1 PFAM: NADPH-dependent FMN reductase; KEGG: pap:PSPA7_4174 hypothetical protein; NADPH-dependent FMN reductase 1924383 10720518 Thicy_1678 Thioalkalimicrobium cyclicum ALM1 NADPH-dependent FMN reductase YP_004537914.1 1923850 D 717773 CDS YP_004537915.1 334144759 10720519 complement(1924380..1925531) 1 NC_015581.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit 1925531 10720519 Thicy_1679 Thioalkalimicrobium cyclicum ALM1 lytic transglycosylase catalytic subunit YP_004537915.1 1924380 R 717773 CDS YP_004537916.1 334144760 10720520 1925601..1926020 1 NC_015581.1 KEGG: btk:BT9727_4471 hypothetical protein; hypothetical protein 1926020 10720520 Thicy_1680 Thioalkalimicrobium cyclicum ALM1 hypothetical protein YP_004537916.1 1925601 D 717773 CDS YP_004537917.1 334144761 10720521 1926113..1928227 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: hha:Hhal_0389 TonB-dependent receptor; TonB-dependent receptor 1928227 10720521 Thicy_1681 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004537917.1 1926113 D 717773 CDS YP_004537918.1 334144762 10720522 1928263..1930476 1 NC_015581.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_2015 TonB-dependent receptor; TonB-dependent receptor 1930476 10720522 Thicy_1682 Thioalkalimicrobium cyclicum ALM1 TonB-dependent receptor YP_004537918.1 1928263 D 717773 CDS YP_004537919.1 334144763 10720523 complement(1930507..1931334) 1 NC_015581.1 KEGG: nhl:Nhal_3061 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; DNA/RNA non-specific endonuclease 1931334 10720523 Thicy_1683 Thioalkalimicrobium cyclicum ALM1 DNA/RNA non-specific endonuclease YP_004537919.1 1930507 R 717773 CDS YP_004537920.1 334144764 10720524 complement(1931478..1932281) 1 NC_015581.1 PFAM: Methyltransferase type 11; KEGG: tcx:Tcr_0084 SmtA protein; type 11 methyltransferase 1932281 10720524 Thicy_1684 Thioalkalimicrobium cyclicum ALM1 type 11 methyltransferase YP_004537920.1 1931478 R 717773 CDS