-- dump date   	20111121_015412
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_015581.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike KapplerPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USAPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: ChemolithoautotrophPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: FacultativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: YesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake MonoPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et alPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: NonmotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: AlkaliphilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002776. URL -- http://www.jgi.doe.gov JGI Project ID: 4089833 Source DNA and organism available from Ulrike Kappler (u.kappler@uq.edu.au) Contacts: Ulrike Kappler (u.kappler@uq.edu.au)           Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Thioalkalimicrobium cyclicum ALM1 collection_date     :: 2002 lat_lon             :: 38.012 -118.976 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Missing num_replicons       :: 1 ref_biomaterial     :: DSM 14477, JCM 11371 biotic_relationship :: Missing trophic_level       :: Chemolithoautotroph rel_to_oxygen       :: Facultative isol_growth_condt   :: 12054257 sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi05326 Type Strain         :: Yes Funding Program     :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site      :: Water; USA, California, Lake Mono Isolation Comments  :: isolated by Sorokin et al Cell Shape          :: Open-ring-shaped Motility            :: Nonmotile Phenotypes          :: Alkaliphile ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.