-- dump date 20111121_015406 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 717773000001 SEQ_END SEQ_END NC_015581.1 1932455 1932455 DR NC_015581.1; contig end 1932455..1932455 Thioalkalimicrobium cyclicum ALM1 YP_004536256.1 CDS Thicy_0001 NC_015581.1 86 1447 D SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: tcx:Tcr_0001 chromosomal replication initiator protein DnaA; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; chromosomal replication initiator protein dnaA 86..1447 Thioalkalimicrobium cyclicum ALM1 10720278 YP_004536257.1 CDS Thicy_0002 NC_015581.1 1458 2567 D SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: tcx:Tcr_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 1458..2567 Thioalkalimicrobium cyclicum ALM1 10718790 YP_004536258.1 CDS Thicy_0003 NC_015581.1 2684 2989 D KEGG: tgr:Tgr7_1738 cytochrome c, class I; hypothetical protein 2684..2989 Thioalkalimicrobium cyclicum ALM1 10718791 YP_004536259.1 CDS Thicy_0004 NC_015581.1 3000 4292 D PFAM: Flavocytochrome c sulphide dehydrogenase, flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tgr:Tgr7_3048 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein 3000..4292 Thioalkalimicrobium cyclicum ALM1 10718792 YP_004536260.1 CDS Thicy_0005 NC_015581.1 4432 6294 D PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: tcx:Tcr_1692 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 4432..6294 Thioalkalimicrobium cyclicum ALM1 10718793 YP_004536261.1 CDS Thicy_0006 NC_015581.1 6473 7477 D TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: tcx:Tcr_0158 molybdenum cofactor synthesis-like; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 6473..7477 Thioalkalimicrobium cyclicum ALM1 10718794 YP_004536262.1 CDS Thicy_0007 NC_015581.1 7507 7761 D KEGG: tcx:Tcr_0159 molybdopterin converting factor, subunit 1; TIGRFAM: Molybdopterin converting factor, subunit 1; MoaD, archaeal; PFAM: ThiamineS; molybdopterin converting factor subunit 1 7507..7761 Thioalkalimicrobium cyclicum ALM1 10718795 YP_004536263.1 CDS Thicy_0008 NC_015581.1 7765 8226 D PFAM: Molybdopterin biosynthesis MoaE; KEGG: tcx:Tcr_0160 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 7765..8226 Thioalkalimicrobium cyclicum ALM1 10718796 YP_004536264.1 CDS Thicy_0009 NC_015581.1 8328 9551 D KEGG: tcx:Tcr_0161 molybdopterin binding domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; molybdenum cofactor synthesis domain-containing protein 8328..9551 Thioalkalimicrobium cyclicum ALM1 10718797 YP_004536265.1 CDS Thicy_0010 NC_015581.1 9570 10043 D KEGG: tcx:Tcr_0162 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C 9570..10043 Thioalkalimicrobium cyclicum ALM1 10718798 YP_004536266.1 CDS Thicy_0011 NC_015581.1 10111 10299 R KEGG: pmy:Pmen_0336 hypothetical protein; hypothetical protein complement(10111..10299) Thioalkalimicrobium cyclicum ALM1 10718799 YP_004536267.1 CDS Thicy_0012 NC_015581.1 10349 11530 R PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: tcx:Tcr_2132 phosphoribosylglycinamide formyltransferase 2; phosphoribosylglycinamide formyltransferase 2 complement(10349..11530) Thioalkalimicrobium cyclicum ALM1 10718800 YP_004536268.1 CDS Thicy_0013 NC_015581.1 11534 12262 R PFAM: Nucleoside phosphorylase; TIGRFAM: MTA/SAH nucleosidase; HAMAP: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; KEGG: tcx:Tcr_2130 adenosylhomocysteine nucleosidase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(11534..12262) Thioalkalimicrobium cyclicum ALM1 10718801 YP_004536269.1 CDS Thicy_0014 NC_015581.1 12259 12780 R HAMAP: S-ribosylhomocysteinase (LuxS); KEGG: abu:Abu_0111 S-ribosylhomocysteinase; PFAM: S-ribosylhomocysteinase (LuxS); quorum-sensing autoinducer 2 (AI-2), LuxS complement(12259..12780) Thioalkalimicrobium cyclicum ALM1 10718802 YP_004536270.1 CDS Thicy_0015 NC_015581.1 12903 13058 D hypothetical protein 12903..13058 Thioalkalimicrobium cyclicum ALM1 10718803 YP_004536271.1 CDS Thicy_0016 NC_015581.1 13570 14865 D PFAM: RmuC; KEGG: lpf:lpl1087 hypothetical protein; RmuC-domain-containing protein 13570..14865 Thioalkalimicrobium cyclicum ALM1 10718806 YP_004536272.1 CDS Thicy_0017 NC_015581.1 15107 17251 D PFAM: Sulphatase-modifying factor; Methyltransferase type 12; KEGG: tcx:Tcr_1543 hypothetical protein; sulfatase-modifying factor protein 15107..17251 Thioalkalimicrobium cyclicum ALM1 10718807 YP_004536273.1 CDS Thicy_0018 NC_015581.1 17233 18495 D KEGG: tcx:Tcr_1542 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; Cystathionine beta-lyase 17233..18495 Thioalkalimicrobium cyclicum ALM1 10718808 YP_004536274.1 CDS Thicy_0019 NC_015581.1 18492 19289 D KEGG: tcx:Tcr_0569 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 18492..19289 Thioalkalimicrobium cyclicum ALM1 10718809 YP_004536275.1 CDS Thicy_0020 NC_015581.1 19324 19971 R TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: sku:Sulku_1000 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; adenylate kinase complement(19324..19971) Thioalkalimicrobium cyclicum ALM1 10718810 YP_004536276.1 CDS Thicy_0021 NC_015581.1 19989 22388 R TIGRFAM: Penicillin-binding protein 1A; KEGG: tcx:Tcr_2056 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; penicillin-binding protein complement(19989..22388) Thioalkalimicrobium cyclicum ALM1 10718811 YP_004536277.1 CDS Thicy_0022 NC_015581.1 22526 22756 R hypothetical protein complement(22526..22756) Thioalkalimicrobium cyclicum ALM1 10718812 YP_004536278.1 CDS Thicy_0023 NC_015581.1 22976 23713 D PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: tau:Tola_0187 ribonuclease PH; Ribonuclease PH 22976..23713 Thioalkalimicrobium cyclicum ALM1 10718813 YP_004536279.1 CDS Thicy_0024 NC_015581.1 23710 24300 D PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: pay:PAU_03283 putative deoxyribonucleotide triphosphate pyrophosphatase; nucleoside-triphosphatase rdgB 23710..24300 Thioalkalimicrobium cyclicum ALM1 10718814 YP_004536280.1 CDS Thicy_0025 NC_015581.1 24317 25567 D TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: tcx:Tcr_0117 putative oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 24317..25567 Thioalkalimicrobium cyclicum ALM1 10718815 YP_004536281.1 CDS Thicy_0026 NC_015581.1 25597 27351 D PFAM: AsmA; KEGG: tcx:Tcr_0118 AsmA; AsmA family protein 25597..27351 Thioalkalimicrobium cyclicum ALM1 10718816 YP_004536282.1 CDS Thicy_0027 NC_015581.1 27394 28725 R KEGG: mmw:Mmwyl1_0985 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein complement(27394..28725) Thioalkalimicrobium cyclicum ALM1 10718817 YP_004536283.1 CDS Thicy_0028 NC_015581.1 28918 29436 D KEGG: ant:Arnit_1245 hypothetical protein; hypothetical protein 28918..29436 Thioalkalimicrobium cyclicum ALM1 10718818 YP_004536284.1 CDS Thicy_0029 NC_015581.1 29489 30136 R KEGG: tcx:Tcr_0163 hypothetical protein; hypothetical protein complement(29489..30136) Thioalkalimicrobium cyclicum ALM1 10718819 YP_004536285.1 CDS Thicy_0030 NC_015581.1 30149 30751 R KEGG: tcx:Tcr_0164 hypothetical protein; hypothetical protein complement(30149..30751) Thioalkalimicrobium cyclicum ALM1 10718820 YP_004536286.1 CDS Thicy_0031 NC_015581.1 30777 31133 R KEGG: mgr:MGG_07173 hypothetical protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region; Hpt domain-containing protein complement(30777..31133) Thioalkalimicrobium cyclicum ALM1 10718821 YP_004536287.1 CDS Thicy_0032 NC_015581.1 31297 32241 R KEGG: tgr:Tgr7_0208 proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1; proline iminopeptidase complement(31297..32241) Thioalkalimicrobium cyclicum ALM1 10718822 YP_004536288.1 CDS Thicy_0033 NC_015581.1 32250 34073 R KEGG: tcx:Tcr_0169 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein TypA complement(32250..34073) Thioalkalimicrobium cyclicum ALM1 10718823 YP_004536289.1 CDS Thicy_0034 NC_015581.1 34210 34656 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein; hypothetical protein complement(34210..34656) Thioalkalimicrobium cyclicum ALM1 10718824 YP_004536290.1 CDS Thicy_0035 NC_015581.1 34660 35148 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0171 YeeE/YedE; hypothetical protein complement(34660..35148) Thioalkalimicrobium cyclicum ALM1 10718825 YP_004536291.1 CDS Thicy_0036 NC_015581.1 35239 36990 R PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: maq:Maqu_3470 putative sulfate transporter YchM; sulfate transporter complement(35239..36990) Thioalkalimicrobium cyclicum ALM1 10718826 YP_004536292.1 CDS Thicy_0037 NC_015581.1 36999 40712 R TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: tcx:Tcr_0172 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; methionine synthase complement(36999..40712) Thioalkalimicrobium cyclicum ALM1 10718827 YP_004536293.1 CDS Thicy_0038 NC_015581.1 40829 41353 R hypothetical protein complement(40829..41353) Thioalkalimicrobium cyclicum ALM1 10718828 YP_004536294.1 CDS Thicy_0039 NC_015581.1 41428 41685 R hypothetical protein complement(41428..41685) Thioalkalimicrobium cyclicum ALM1 10718829 YP_004536295.1 CDS Thicy_0040 NC_015581.1 41657 42463 R PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: tcx:Tcr_1608 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin complement(41657..42463) Thioalkalimicrobium cyclicum ALM1 10718830 YP_004536296.1 CDS Thicy_0041 NC_015581.1 42712 43323 R KEGG: har:HEAR2756 putative chorismate--pyruvate lyase; HAMAP: Chorismate--pyruvate lyase; PFAM: Chorismate--pyruvate lyase; chorismate--pyruvate lyase complement(42712..43323) Thioalkalimicrobium cyclicum ALM1 10718831 YP_004536297.1 CDS Thicy_0042 NC_015581.1 43292 45394 R TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_2153 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; ATP-dependent DNA helicase RecG complement(43292..45394) Thioalkalimicrobium cyclicum ALM1 10718832 YP_004536298.1 CDS Thicy_0043 NC_015581.1 45409 45795 R KEGG: tcx:Tcr_2150 YjgF-like protein; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(45409..45795) Thioalkalimicrobium cyclicum ALM1 10718833 YP_004536299.1 CDS Thicy_0044 NC_015581.1 45828 48005 R SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: tcx:Tcr_2144 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA complement(45828..48005) Thioalkalimicrobium cyclicum ALM1 10718834 YP_004536300.1 CDS Thicy_0045 NC_015581.1 48018 48242 R TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: tcx:Tcr_2143 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(48018..48242) Thioalkalimicrobium cyclicum ALM1 10718835 YP_004536301.1 CDS Thicy_0046 NC_015581.1 48313 49188 D PFAM: Mechanosensitive ion channel MscS; KEGG: pat:Patl_3333 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 48313..49188 Thioalkalimicrobium cyclicum ALM1 10718836 YP_004536302.1 CDS Thicy_0047 NC_015581.1 49185 49742 D KEGG: tcx:Tcr_0151 hexapaptide repeat-containing transferase; hexapeptide repeat-containing transferase 49185..49742 Thioalkalimicrobium cyclicum ALM1 10718837 YP_004536303.1 CDS Thicy_0048 NC_015581.1 49687 50538 R TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: tcx:Tcr_0153 shikimate 5-dehydrogenase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Shikimate dehydrogenase substrate binding, N-terminal; shikimate dehydrogenase complement(49687..50538) Thioalkalimicrobium cyclicum ALM1 10718838 YP_004536304.1 CDS Thicy_0049 NC_015581.1 50535 51545 R KEGG: tcx:Tcr_0154 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; porphobilinogen synthase complement(50535..51545) Thioalkalimicrobium cyclicum ALM1 10718839 YP_004536305.1 CDS Thicy_0050 NC_015581.1 51924 53279 D KEGG: tcx:Tcr_0156 Mo-Co oxidoreductase dimerisation subunit; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation; Nitrate reductase (NADH) 51924..53279 Thioalkalimicrobium cyclicum ALM1 10718840 YP_004536306.1 CDS Thicy_0051 NC_015581.1 53266 54375 D KEGG: tcx:Tcr_0157 hypothetical protein; hypothetical protein 53266..54375 Thioalkalimicrobium cyclicum ALM1 10718841 YP_004536307.1 CDS Thicy_0052 NC_015581.1 54541 55476 D PFAM: Aminoglycoside phosphotransferase; TIGRFAM: Homoserine kinase ThrB; HAMAP: Homoserine kinase; KEGG: tcx:Tcr_0043 homoserine kinase; Homoserine kinase 54541..55476 Thioalkalimicrobium cyclicum ALM1 10718842 YP_004536308.1 CDS Thicy_0053 NC_015581.1 55644 57893 D TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: fbl:Fbal_1991 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 55644..57893 Thioalkalimicrobium cyclicum ALM1 10718843 YP_004536309.1 CDS Thicy_0054 NC_015581.1 57883 59526 D KEGG: tcx:Tcr_2017 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucomutase, alpha-D-glucose phosphate-specific 57883..59526 Thioalkalimicrobium cyclicum ALM1 10718844 YP_004536310.1 CDS Thicy_0055 NC_015581.1 59561 60241 R PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: tcx:Tcr_2053 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(59561..60241) Thioalkalimicrobium cyclicum ALM1 10718845 YP_004536311.1 CDS Thicy_0056 NC_015581.1 60254 61081 R TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: tcx:Tcr_2052 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(60254..61081) Thioalkalimicrobium cyclicum ALM1 10718846 YP_004536312.1 CDS Thicy_0057 NC_015581.1 61207 62064 D TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: tcx:Tcr_2051 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; formyltetrahydrofolate deformylase 61207..62064 Thioalkalimicrobium cyclicum ALM1 10718847 YP_004536313.1 CDS Thicy_0058 NC_015581.1 62071 64323 R PFAM: Protein of unknown function DUF699, ATPase putative; KEGG: tcx:Tcr_2050 hypothetical protein; hypothetical protein complement(62071..64323) Thioalkalimicrobium cyclicum ALM1 10718848 YP_004536314.1 CDS Thicy_0059 NC_015581.1 64371 65732 D KEGG: tcx:Tcr_0130 hypothetical protein; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; PFAM: FAD dependent oxidoreductase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 64371..65732 Thioalkalimicrobium cyclicum ALM1 10718849 YP_004536315.1 CDS Thicy_0060 NC_015581.1 65729 67396 D KEGG: mmw:Mmwyl1_0714 hypothetical protein; hypothetical protein 65729..67396 Thioalkalimicrobium cyclicum ALM1 10718850 YP_004536316.1 CDS Thicy_0061 NC_015581.1 67485 68117 D KEGG: mmw:Mmwyl1_0713 hypothetical protein; hypothetical protein 67485..68117 Thioalkalimicrobium cyclicum ALM1 10718851 YP_004536317.1 CDS Thicy_0062 NC_015581.1 68118 68321 D hypothetical protein 68118..68321 Thioalkalimicrobium cyclicum ALM1 10718852 YP_004536318.1 CDS Thicy_0063 NC_015581.1 68358 68936 D PFAM: YfaZ; KEGG: tcx:Tcr_0132 YfaZ; hypothetical protein 68358..68936 Thioalkalimicrobium cyclicum ALM1 10718853 YP_004536319.1 CDS Thicy_0064 NC_015581.1 69021 70343 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hha:Hhal_1665 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 69021..70343 Thioalkalimicrobium cyclicum ALM1 10718854 YP_004536320.1 CDS Thicy_0065 NC_015581.1 70350 70688 D hypothetical protein 70350..70688 Thioalkalimicrobium cyclicum ALM1 10718855 YP_004536321.1 CDS Thicy_0066 NC_015581.1 70786 71550 D PFAM: Molybdopterin binding; KEGG: tcx:Tcr_0136 molybdopterin binding domain-containing protein; molybdopterin binding domain-containing protein 70786..71550 Thioalkalimicrobium cyclicum ALM1 10718856 YP_004536322.1 CDS Thicy_0067 NC_015581.1 71547 72731 D KEGG: tcx:Tcr_0137 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; hypothetical protein 71547..72731 Thioalkalimicrobium cyclicum ALM1 10718857 YP_004536323.1 CDS Thicy_0068 NC_015581.1 72750 73199 D KEGG: tcx:Tcr_0138 hypothetical protein; hypothetical protein 72750..73199 Thioalkalimicrobium cyclicum ALM1 10718858 YP_004536324.1 CDS Thicy_0069 NC_015581.1 73307 73912 D PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tgr:Tgr7_1468 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 73307..73912 Thioalkalimicrobium cyclicum ALM1 10718859 YP_004536325.1 CDS Thicy_0070 NC_015581.1 74062 74811 D KEGG: tcx:Tcr_0139 glutaredoxin-like region; TIGRFAM: Glutaredoxin-like region; PFAM: Redoxin; Glutaredoxin; glutaredoxin domain-containing protein 74062..74811 Thioalkalimicrobium cyclicum ALM1 10718860 YP_004536326.1 CDS Thicy_0071 NC_015581.1 74918 76273 D KEGG: tcx:Tcr_0140 glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; glutathione-disulfide reductase 74918..76273 Thioalkalimicrobium cyclicum ALM1 10718861 YP_004536327.1 CDS Thicy_0072 NC_015581.1 76275 77552 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: tcx:Tcr_2142 three-deoxy-D-manno-octulosonic-acid transferase-like; tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(76275..77552) Thioalkalimicrobium cyclicum ALM1 10718862 YP_004536328.1 CDS Thicy_0073 NC_015581.1 77554 78300 R PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: tcx:Tcr_2141 3-deoxy-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(77554..78300) Thioalkalimicrobium cyclicum ALM1 10718863 YP_004536329.1 CDS Thicy_0074 NC_015581.1 78300 79373 R PFAM: Alcohol dehydrogenase, iron-type; KEGG: tcx:Tcr_2140 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(78300..79373) Thioalkalimicrobium cyclicum ALM1 10718864 YP_004536330.1 CDS Thicy_0075 NC_015581.1 79384 80571 R KEGG: tcx:Tcr_2139 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(79384..80571) Thioalkalimicrobium cyclicum ALM1 10718865 YP_004536331.1 CDS Thicy_0076 NC_015581.1 80585 81199 R KEGG: tcx:Tcr_2138 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region; guanylate kinase complement(80585..81199) Thioalkalimicrobium cyclicum ALM1 10718866 YP_004536332.1 CDS Thicy_0077 NC_015581.1 81302 81829 D HAMAP: Shikimate kinase; KEGG: tcx:Tcr_2137 shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 81302..81829 Thioalkalimicrobium cyclicum ALM1 10718867 YP_004536333.1 CDS Thicy_0078 NC_015581.1 81883 82962 D PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: tcx:Tcr_2136 3-dehydroquinate synthase; 3-dehydroquinate synthase 81883..82962 Thioalkalimicrobium cyclicum ALM1 10718868 YP_004536334.1 CDS Thicy_0079 NC_015581.1 83082 83990 D PFAM: Aldose 1-epimerase; KEGG: tgr:Tgr7_2611 aldose 1-epimerase; aldose-1-epimerase 83082..83990 Thioalkalimicrobium cyclicum ALM1 10718869 YP_004536335.1 CDS Thicy_0080 NC_015581.1 83987 84322 D KEGG: tcx:Tcr_0514 hypothetical protein; hypothetical protein 83987..84322 Thioalkalimicrobium cyclicum ALM1 10718870 YP_004536336.1 CDS Thicy_0081 NC_015581.1 84399 85007 R KEGG: tcx:Tcr_0237 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; Superoxide dismutase complement(84399..85007) Thioalkalimicrobium cyclicum ALM1 10718871 YP_004536337.1 CDS Thicy_0082 NC_015581.1 85125 85433 R KEGG: tcx:Tcr_0238 hypothetical protein; HAMAP: YcgL domain; PFAM: YcgL domain; hypothetical protein complement(85125..85433) Thioalkalimicrobium cyclicum ALM1 10718872 YP_004536338.1 CDS Thicy_0083 NC_015581.1 85588 86559 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0239 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 85588..86559 Thioalkalimicrobium cyclicum ALM1 10718873 YP_004536339.1 CDS Thicy_0084 NC_015581.1 86563 87807 D HAMAP: CCA-adding enzyme; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: tcx:Tcr_0240 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 86563..87807 Thioalkalimicrobium cyclicum ALM1 10718874 YP_004536340.1 CDS Thicy_0085 NC_015581.1 87808 88731 D KEGG: tcx:Tcr_0241 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein; cation diffusion facilitator family transporter 87808..88731 Thioalkalimicrobium cyclicum ALM1 10718875 YP_004536341.1 CDS Thicy_0086 NC_015581.1 88770 90008 D KEGG: tcx:Tcr_0242 secretion protein HlyD; secretion protein HlyD 88770..90008 Thioalkalimicrobium cyclicum ALM1 10718876 YP_004536342.1 CDS Thicy_0087 NC_015581.1 90001 93111 D PFAM: Acriflavin resistance protein; KEGG: tcx:Tcr_0243 acriflavin resistance protein; acriflavin resistance protein 90001..93111 Thioalkalimicrobium cyclicum ALM1 10718877 YP_004536343.1 CDS Thicy_0088 NC_015581.1 93277 95286 D TIGRFAM: Transketolase, bacterial-like; KEGG: tcx:Tcr_0244 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; transketolase 93277..95286 Thioalkalimicrobium cyclicum ALM1 10718878 YP_004536344.1 CDS Thicy_0089 NC_015581.1 95380 96378 D TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tcx:Tcr_0245 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 95380..96378 Thioalkalimicrobium cyclicum ALM1 10718879 YP_004536345.1 CDS Thicy_0090 NC_015581.1 96389 97567 D HAMAP: Phosphoglycerate kinase; KEGG: tcx:Tcr_0246 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 96389..97567 Thioalkalimicrobium cyclicum ALM1 10718880 YP_004536346.1 CDS Thicy_0091 NC_015581.1 97808 99250 D TIGRFAM: Pyruvate kinase; KEGG: tcx:Tcr_0247 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase 97808..99250 Thioalkalimicrobium cyclicum ALM1 10718881 YP_004536347.1 CDS Thicy_0092 NC_015581.1 99303 100367 D TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: tcx:Tcr_0248 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 99303..100367 Thioalkalimicrobium cyclicum ALM1 10718882 YP_004536348.1 CDS Thicy_0093 NC_015581.1 100632 101684 D PFAM: Porin, Gram-negative type; KEGG: tcx:Tcr_0464 porin; porin 100632..101684 Thioalkalimicrobium cyclicum ALM1 10718883 YP_004536349.1 CDS Thicy_0094 NC_015581.1 101849 102799 R KEGG: cch:Cag_1509 hypothetical protein; hypothetical protein complement(101849..102799) Thioalkalimicrobium cyclicum ALM1 10718884 YP_004536350.1 CDS Thicy_0095 NC_015581.1 102903 103628 R TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: tcx:Tcr_0261 dethiobiotin synthase; dethiobiotin synthetase complement(102903..103628) Thioalkalimicrobium cyclicum ALM1 10718885 YP_004536351.1 CDS Thicy_0096 NC_015581.1 103632 104519 R PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: tcx:Tcr_0262 phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(103632..104519) Thioalkalimicrobium cyclicum ALM1 10718886 YP_004536352.1 CDS Thicy_0097 NC_015581.1 104529 104987 R PFAM: Phosphate-starvation-inducible E; KEGG: tcx:Tcr_0263 phosphate-starvation-inducible E; phosphate-starvation-inducible E complement(104529..104987) Thioalkalimicrobium cyclicum ALM1 10718887 YP_004536353.1 CDS Thicy_0098 NC_015581.1 105177 105881 D TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: tcx:Tcr_0264 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 105177..105881 Thioalkalimicrobium cyclicum ALM1 10718888 YP_004536354.1 CDS Thicy_0099 NC_015581.1 105889 106575 D TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: tcx:Tcr_0265 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 105889..106575 Thioalkalimicrobium cyclicum ALM1 10718889 YP_004536355.1 CDS Thicy_0100 NC_015581.1 106579 108093 D TIGRFAM: Anthranilate synthase component I; KEGG: tcx:Tcr_0266 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase component I 106579..108093 Thioalkalimicrobium cyclicum ALM1 10718890 YP_004536356.1 CDS Thicy_0101 NC_015581.1 108077 108661 D TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: tcx:Tcr_0267 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; glutamine amidotransferase of anthranilate synthase 108077..108661 Thioalkalimicrobium cyclicum ALM1 10718891 YP_004536357.1 CDS Thicy_0102 NC_015581.1 108665 109684 D PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: tcx:Tcr_0268 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 108665..109684 Thioalkalimicrobium cyclicum ALM1 10718892 YP_004536358.1 CDS Thicy_0103 NC_015581.1 109694 110500 D KEGG: psa:PST_0747 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 109694..110500 Thioalkalimicrobium cyclicum ALM1 10718893 YP_004536359.1 CDS Thicy_0104 NC_015581.1 110589 111017 D PFAM: Peroxiredoxin, OsmC-like protein; KEGG: tgr:Tgr7_2796 OsmC/Ohr family protein; OsmC family protein 110589..111017 Thioalkalimicrobium cyclicum ALM1 10718894 YP_004536360.1 CDS Thicy_0105 NC_015581.1 111125 111631 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: tcx:Tcr_0272 S-adenosylmethionine decarboxylase related; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; S-adenosylmethionine decarboxylase 111125..111631 Thioalkalimicrobium cyclicum ALM1 10718895 YP_004536361.1 CDS Thicy_0106 NC_015581.1 111628 112455 D TIGRFAM: Spermine synthase; HAMAP: Spermidine synthase; KEGG: tcx:Tcr_0273 spermidine synthase; PFAM: Spermine synthase; spermidine synthase 111628..112455 Thioalkalimicrobium cyclicum ALM1 10718896 YP_004536362.1 CDS Thicy_0107 NC_015581.1 112486 113817 R TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: tcx:Tcr_0277 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; adenosylmethionine--8-amino-7-oxononanoate aminotransferase complement(112486..113817) Thioalkalimicrobium cyclicum ALM1 10718897 YP_004536363.1 CDS Thicy_0108 NC_015581.1 114249 115439 D manually curated; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: tcx:Tcr_0293 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 114249..115439 Thioalkalimicrobium cyclicum ALM1 10718901 YP_004536364.1 CDS Thicy_0109 NC_015581.1 115628 116011 D KEGG: tcx:Tcr_0282 SecE subunit of protein translocation complex; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein; preprotein translocase subunit SecE 115628..116011 Thioalkalimicrobium cyclicum ALM1 10718903 YP_004536365.1 CDS Thicy_0110 NC_015581.1 116013 116546 D TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: tcx:Tcr_0283 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; NusG antitermination factor 116013..116546 Thioalkalimicrobium cyclicum ALM1 10718904 YP_004536366.1 CDS Thicy_0111 NC_015581.1 116598 117026 D TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; KEGG: tcx:Tcr_0284 ribosomal protein L11; SMART: Ribosomal protein L11; 50S ribosomal protein L11 116598..117026 Thioalkalimicrobium cyclicum ALM1 10718905 YP_004536367.1 CDS Thicy_0112 NC_015581.1 117033 117722 D KEGG: tcx:Tcr_0285 ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1; 50S ribosomal protein L1 117033..117722 Thioalkalimicrobium cyclicum ALM1 10718906 YP_004536368.1 CDS Thicy_0113 NC_015581.1 117886 118380 D KEGG: tcx:Tcr_0286 ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 117886..118380 Thioalkalimicrobium cyclicum ALM1 10718907 YP_004536369.1 CDS Thicy_0114 NC_015581.1 118420 118788 D TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: alv:Alvin_2371 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; 50S ribosomal protein L7/L12 118420..118788 Thioalkalimicrobium cyclicum ALM1 10718908 YP_004536370.1 CDS Thicy_0115 NC_015581.1 118954 123012 D TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: tcx:Tcr_0288 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; DNA-directed RNA polymerase subunit beta 118954..123012 Thioalkalimicrobium cyclicum ALM1 10718909 YP_004536371.1 CDS Thicy_0116 NC_015581.1 123013 127254 D SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: tcx:Tcr_0289 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; DNA-directed RNA polymerase subunit beta' 123013..127254 Thioalkalimicrobium cyclicum ALM1 10718910 YP_004536372.1 CDS Thicy_0117 NC_015581.1 127381 127758 D KEGG: tcx:Tcr_0290 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23; 30S ribosomal protein S12 127381..127758 Thioalkalimicrobium cyclicum ALM1 10718911 YP_004536373.1 CDS Thicy_0118 NC_015581.1 127813 128286 D KEGG: tcx:Tcr_0291 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7; 30S ribosomal protein S7 127813..128286 Thioalkalimicrobium cyclicum ALM1 10718912 YP_004536374.1 CDS Thicy_0119 NC_015581.1 128350 130452 D KEGG: tcx:Tcr_0292 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; translation elongation factor G 128350..130452 Thioalkalimicrobium cyclicum ALM1 10718913 YP_004536375.1 CDS Thicy_0120 NC_015581.1 130478 131668 D KEGG: tcx:Tcr_0293 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; translation elongation factor Tu 130478..131668 Thioalkalimicrobium cyclicum ALM1 10718914 YP_004536376.1 CDS Thicy_0121 NC_015581.1 131770 132081 D TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: tcx:Tcr_0294 ribosomal protein S10; PFAM: Ribosomal protein S10; 30S ribosomal protein S10 131770..132081 Thioalkalimicrobium cyclicum ALM1 10718915 YP_004536377.1 CDS Thicy_0122 NC_015581.1 132139 132774 D KEGG: tcx:Tcr_0295 ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; 50S ribosomal protein L3 132139..132774 Thioalkalimicrobium cyclicum ALM1 10718916 YP_004536378.1 CDS Thicy_0123 NC_015581.1 132785 133405 D PFAM: Ribosomal protein L4/L1e; KEGG: tcx:Tcr_0296 ribosomal protein L4/L1e; 50S ribosomal protein L4/L1e 132785..133405 Thioalkalimicrobium cyclicum ALM1 10718917 YP_004536379.1 CDS Thicy_0124 NC_015581.1 133402 133698 D PFAM: Ribosomal protein L25/L23; KEGG: tcx:Tcr_0297 ribosomal L23 protein; 50S ribosomal protein L25/L23 133402..133698 Thioalkalimicrobium cyclicum ALM1 10718918 YP_004536380.1 CDS Thicy_0125 NC_015581.1 133709 134539 D KEGG: tcx:Tcr_0298 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2; 50S ribosomal protein L2 133709..134539 Thioalkalimicrobium cyclicum ALM1 10718919 YP_004536381.1 CDS Thicy_0126 NC_015581.1 134551 134826 D KEGG: tcx:Tcr_0299 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15; 30S ribosomal protein S19 134551..134826 Thioalkalimicrobium cyclicum ALM1 10718920 YP_004536382.1 CDS Thicy_0127 NC_015581.1 134839 135171 D KEGG: tcx:Tcr_0300 ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17; 50S ribosomal protein L22 134839..135171 Thioalkalimicrobium cyclicum ALM1 10718921 YP_004536383.1 CDS Thicy_0128 NC_015581.1 135183 135872 D TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: tcx:Tcr_0301 ribosomal protein S3; SMART: K Homology; 30S ribosomal protein S3 135183..135872 Thioalkalimicrobium cyclicum ALM1 10718922 YP_004536384.1 CDS Thicy_0129 NC_015581.1 135886 136299 D TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: tcx:Tcr_0302 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 135886..136299 Thioalkalimicrobium cyclicum ALM1 10718923 YP_004536385.1 CDS Thicy_0130 NC_015581.1 136301 136492 D KEGG: saz:Sama_0221 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; 50S ribosomal protein L29 136301..136492 Thioalkalimicrobium cyclicum ALM1 10718924 YP_004536386.1 CDS Thicy_0131 NC_015581.1 136494 136757 D KEGG: tcx:Tcr_0304 ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; 30S ribosomal protein S17 136494..136757 Thioalkalimicrobium cyclicum ALM1 10718925 YP_004536387.1 CDS Thicy_0132 NC_015581.1 136876 137244 D KEGG: cvi:CV_4176 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e; 50S ribosomal protein L14 136876..137244 Thioalkalimicrobium cyclicum ALM1 10718926 YP_004536388.1 CDS Thicy_0133 NC_015581.1 137255 137569 D TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: tcx:Tcr_0306 ribosomal protein L24; SMART: KOW; 50S ribosomal protein L24 137255..137569 Thioalkalimicrobium cyclicum ALM1 10718927 YP_004536389.1 CDS Thicy_0134 NC_015581.1 137583 138122 D PFAM: Ribosomal protein L5; KEGG: tcx:Tcr_0307 50S ribosomal protein L5; 50S ribosomal protein L5 137583..138122 Thioalkalimicrobium cyclicum ALM1 10718928 YP_004536390.1 CDS Thicy_0135 NC_015581.1 138134 138439 D KEGG: tcx:Tcr_0308 ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14; 30S ribosomal protein S14 138134..138439 Thioalkalimicrobium cyclicum ALM1 10718929 YP_004536391.1 CDS Thicy_0136 NC_015581.1 138449 138844 D PFAM: Ribosomal protein S8; KEGG: tcx:Tcr_0309 ribosomal protein S8; 30S ribosomal protein S8 138449..138844 Thioalkalimicrobium cyclicum ALM1 10718930 YP_004536392.1 CDS Thicy_0137 NC_015581.1 138856 139389 D KEGG: tcx:Tcr_0310 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 138856..139389 Thioalkalimicrobium cyclicum ALM1 10718931 YP_004536393.1 CDS Thicy_0138 NC_015581.1 139402 139755 D KEGG: tcx:Tcr_0311 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5; 50S ribosomal protein L18 139402..139755 Thioalkalimicrobium cyclicum ALM1 10718932 YP_004536394.1 CDS Thicy_0139 NC_015581.1 139770 140279 D KEGG: tcx:Tcr_0312 ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; 30S ribosomal protein S5 139770..140279 Thioalkalimicrobium cyclicum ALM1 10718933 YP_004536395.1 CDS Thicy_0140 NC_015581.1 140281 140469 D KEGG: tcx:Tcr_0313 ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region; 50S ribosomal protein L30 140281..140469 Thioalkalimicrobium cyclicum ALM1 10718934 YP_004536396.1 CDS Thicy_0141 NC_015581.1 140471 140905 D KEGG: tcx:Tcr_0314 ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15; 50S ribosomal protein L15 140471..140905 Thioalkalimicrobium cyclicum ALM1 10718935 YP_004536397.1 CDS Thicy_0142 NC_015581.1 140909 142237 D KEGG: tcx:Tcr_0315 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein; preprotein translocase subunit SecY 140909..142237 Thioalkalimicrobium cyclicum ALM1 10718936 YP_004536398.1 CDS Thicy_0143 NC_015581.1 142325 142681 D KEGG: tcx:Tcr_0316 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13; 30S ribosomal protein S13 142325..142681 Thioalkalimicrobium cyclicum ALM1 10718937 YP_004536399.1 CDS Thicy_0144 NC_015581.1 142700 143089 D KEGG: tcx:Tcr_0317 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; 30S ribosomal protein S11 142700..143089 Thioalkalimicrobium cyclicum ALM1 10718938 YP_004536400.1 CDS Thicy_0145 NC_015581.1 143101 143721 D TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: tcx:Tcr_0318 ribosomal protein S4; SMART: RNA-binding S4; 30S ribosomal protein S4 143101..143721 Thioalkalimicrobium cyclicum ALM1 10718939 YP_004536401.1 CDS Thicy_0146 NC_015581.1 143747 144733 D SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: tcx:Tcr_0319 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase subunit alpha 143747..144733 Thioalkalimicrobium cyclicum ALM1 10718940 YP_004536402.1 CDS Thicy_0147 NC_015581.1 144752 145147 D TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: tcx:Tcr_0320 ribosomal protein L17; PFAM: Ribosomal protein L17; 50S ribosomal protein L17 144752..145147 Thioalkalimicrobium cyclicum ALM1 10718941 YP_004536403.1 CDS Thicy_0148 NC_015581.1 145198 145950 D PFAM: Deoxyribonuclease, TatD-related; KEGG: tcx:Tcr_0321 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 145198..145950 Thioalkalimicrobium cyclicum ALM1 10718942 YP_004536404.1 CDS Thicy_0149 NC_015581.1 145937 146668 D PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: tcx:Tcr_0322 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 145937..146668 Thioalkalimicrobium cyclicum ALM1 10718943 YP_004536405.1 CDS Thicy_0150 NC_015581.1 146668 147771 D KEGG: tcx:Tcr_1848 hypothetical protein; hypothetical protein 146668..147771 Thioalkalimicrobium cyclicum ALM1 10718944 YP_004536406.1 CDS Thicy_0151 NC_015581.1 147818 149077 R TIGRFAM: Diaminopimelate decarboxylase; KEGG: tcx:Tcr_1847 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(147818..149077) Thioalkalimicrobium cyclicum ALM1 10718945 YP_004536407.1 CDS Thicy_0152 NC_015581.1 149079 149282 R hypothetical protein complement(149079..149282) Thioalkalimicrobium cyclicum ALM1 10718946 YP_004536408.1 CDS Thicy_0153 NC_015581.1 149369 150058 D KEGG: tcx:Tcr_1846 carboxylesterase; PFAM: Phospholipase/carboxylesterase; carboxylesterase 149369..150058 Thioalkalimicrobium cyclicum ALM1 10718947 YP_004536409.1 CDS Thicy_0154 NC_015581.1 150058 150447 D PFAM: Thioesterase superfamily; KEGG: pha:PSHAa0477 thioesterase superfamily protein; thioesterase superfamily protein 150058..150447 Thioalkalimicrobium cyclicum ALM1 10718948 YP_004536410.1 CDS Thicy_0155 NC_015581.1 150461 151687 D TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: tcx:Tcr_1915 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 150461..151687 Thioalkalimicrobium cyclicum ALM1 10718949 YP_004536411.1 CDS Thicy_0156 NC_015581.1 151731 154538 R TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: tcx:Tcr_0324 excinuclease ABC, A subunit; PFAM: ABC transporter-like; UvrABC system protein A complement(151731..154538) Thioalkalimicrobium cyclicum ALM1 10718950 YP_004536412.1 CDS Thicy_0157 NC_015581.1 154759 155370 D PFAM: Flavin reductase-like, FMN-binding; KEGG: hypothetical protein; flavin reductase domain-containing FMN-binding protein 154759..155370 Thioalkalimicrobium cyclicum ALM1 10718951 YP_004536413.1 CDS Thicy_0158 NC_015581.1 155430 155738 D KEGG: tcx:Tcr_1017 hypothetical protein; hypothetical protein 155430..155738 Thioalkalimicrobium cyclicum ALM1 10718952 YP_004536414.1 CDS Thicy_0159 NC_015581.1 155758 156144 D PFAM: Protein of unknown function DUF302; KEGG: tcx:Tcr_2069 hypothetical protein; hypothetical protein 155758..156144 Thioalkalimicrobium cyclicum ALM1 10718953 YP_004536415.1 CDS Thicy_0160 NC_015581.1 156258 157841 D PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; KEGG: maq:Maqu_3105 deoxyribodipyrimidine photo-lyase; DNA photolyase FAD-binding protein 156258..157841 Thioalkalimicrobium cyclicum ALM1 10718954 YP_004536416.1 CDS Thicy_0161 NC_015581.1 157848 158000 D KEGG: hoh:Hoch_1752 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205; hypothetical protein 157848..158000 Thioalkalimicrobium cyclicum ALM1 10718955 YP_004536417.1 CDS Thicy_0162 NC_015581.1 157981 159534 D KEGG: mpt:Mpe_A2055 putative alpha-deoxyribodipyrimidine photolyase-related protein; manually curated; PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; deoxyribodipyrimidine photolyase-like protein 157981..159534 Thioalkalimicrobium cyclicum ALM1 10718956 YP_004536418.1 CDS Thicy_0163 NC_015581.1 159713 161104 D PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0326 major facilitator transporter; major facilitator superfamily protein 159713..161104 Thioalkalimicrobium cyclicum ALM1 10718957 YP_004536419.1 CDS Thicy_0164 NC_015581.1 161112 161690 D KEGG: tcx:Tcr_0327 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding; single-strand binding protein 161112..161690 Thioalkalimicrobium cyclicum ALM1 10718958 YP_004536420.1 CDS Thicy_0165 NC_015581.1 161718 162683 R KEGG: tcx:Tcr_0340 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; trans-hexaprenyltranstransferase complement(161718..162683) Thioalkalimicrobium cyclicum ALM1 10718959 YP_004536421.1 CDS Thicy_0166 NC_015581.1 162979 163293 D TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: tcx:Tcr_0341 ribosomal protein L21; PFAM: Ribosomal protein L21; 50S ribosomal protein L21 162979..163293 Thioalkalimicrobium cyclicum ALM1 10718960 YP_004536422.1 CDS Thicy_0167 NC_015581.1 163358 163621 D TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: tcx:Tcr_0342 50S ribosomal protein L27; PFAM: Ribosomal protein L27; 50S ribosomal protein L27 163358..163621 Thioalkalimicrobium cyclicum ALM1 10718961 YP_004536423.1 CDS Thicy_0168 NC_015581.1 163723 164787 D TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: tcx:Tcr_0343 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; GTPase obg 163723..164787 Thioalkalimicrobium cyclicum ALM1 10718962 YP_004536424.1 CDS Thicy_0169 NC_015581.1 164789 165910 D SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: tcx:Tcr_0344 gamma-glutamyl kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; glutamate 5-kinase 164789..165910 Thioalkalimicrobium cyclicum ALM1 10718963 YP_004536425.1 CDS Thicy_0170 NC_015581.1 165962 167314 D PFAM: Major facilitator superfamily MFS-1; KEGG: ant:Arnit_2391 major facilitator superfamily protein; major facilitator superfamily protein 165962..167314 Thioalkalimicrobium cyclicum ALM1 10718964 YP_004536426.1 CDS Thicy_0171 NC_015581.1 167311 168366 R PFAM: Porin, Gram-negative type; KEGG: tgr:Tgr7_3127 porin gram-negative type; porin complement(167311..168366) Thioalkalimicrobium cyclicum ALM1 10718965 YP_004536427.1 CDS Thicy_0172 NC_015581.1 168390 170351 R KEGG: dak:DaAHT2_1056 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter complement(168390..170351) Thioalkalimicrobium cyclicum ALM1 10718966 YP_004536428.1 CDS Thicy_0173 NC_015581.1 170650 170937 D KEGG: mca:MCA0706 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10; 10 kDa chaperonin 170650..170937 Thioalkalimicrobium cyclicum ALM1 10718967 YP_004536429.1 CDS Thicy_0174 NC_015581.1 170975 172606 D TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: tcx:Tcr_0346 chaperonin Cpn60/TCP-1; PFAM: Chaperonin Cpn60/TCP-1; 60 kDa chaperonin 170975..172606 Thioalkalimicrobium cyclicum ALM1 10718968 YP_004536430.1 CDS Thicy_0175 NC_015581.1 172743 173789 D PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: tcx:Tcr_0348 N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-gamma-glutamyl-phosphate reductase 172743..173789 Thioalkalimicrobium cyclicum ALM1 10718969 YP_004536431.1 CDS Thicy_0176 NC_015581.1 173887 174231 D TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: tcx:Tcr_0349 HesB/YadR/YfhF; PFAM: FeS cluster biogenesis; Iron--sulfur cluster insertion protein erpA 173887..174231 Thioalkalimicrobium cyclicum ALM1 10718970 YP_004536432.1 CDS Thicy_0177 NC_015581.1 174292 175494 D KEGG: tcx:Tcr_0350 citrate synthase; PFAM: Citrate synthase-like; citrate (Si)-synthase 174292..175494 Thioalkalimicrobium cyclicum ALM1 10718971 YP_004536433.1 CDS Thicy_0178 NC_015581.1 175663 176091 D KEGG: tcx:Tcr_0461 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; 50S ribosomal protein L13 175663..176091 Thioalkalimicrobium cyclicum ALM1 10718972 YP_004536434.1 CDS Thicy_0179 NC_015581.1 176102 176494 D PFAM: Ribosomal protein S9; KEGG: tcx:Tcr_0462 ribosomal protein S9; 30S ribosomal protein S9 176102..176494 Thioalkalimicrobium cyclicum ALM1 10718973 YP_004536435.1 CDS Thicy_0180 NC_015581.1 176609 177055 D TIGRFAM: PAS; PFAM: PAS fold; KEGG: pmy:Pmen_3284 putative PAS/PAC sensor protein; SMART: PAC motif; PAS; PAS sensor protein 176609..177055 Thioalkalimicrobium cyclicum ALM1 10718974 YP_004536436.1 CDS Thicy_0181 NC_015581.1 177070 177972 R KEGG: tcx:Tcr_2126 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(177070..177972) Thioalkalimicrobium cyclicum ALM1 10718975 YP_004536437.1 CDS Thicy_0182 NC_015581.1 177969 179405 R KEGG: tcx:Tcr_2125 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; deoxyribodipyrimidine photo-lyase complement(177969..179405) Thioalkalimicrobium cyclicum ALM1 10718976 YP_004536438.1 CDS Thicy_0183 NC_015581.1 179406 179915 R KEGG: tgr:Tgr7_1384 hypothetical protein; hypothetical protein complement(179406..179915) Thioalkalimicrobium cyclicum ALM1 10718977 YP_004536439.1 CDS Thicy_0184 NC_015581.1 179912 180454 R KEGG: hse:Hsero_1057 lipoprotein; lipoprotein complement(179912..180454) Thioalkalimicrobium cyclicum ALM1 10718978 YP_004536440.1 CDS Thicy_0185 NC_015581.1 180441 181670 R KEGG: tgr:Tgr7_1388 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(180441..181670) Thioalkalimicrobium cyclicum ALM1 10718979 YP_004536441.1 CDS Thicy_0186 NC_015581.1 181664 182449 R PFAM: Protein of unknown function DUF1365; KEGG: tgr:Tgr7_1389 hypothetical protein; hypothetical protein complement(181664..182449) Thioalkalimicrobium cyclicum ALM1 10718980 YP_004536442.1 CDS Thicy_0187 NC_015581.1 182449 183732 R PFAM: FAD dependent oxidoreductase; KEGG: hna:Hneap_1890 amine oxidase; FAD dependent oxidoreductase complement(182449..183732) Thioalkalimicrobium cyclicum ALM1 10718981 YP_004536443.1 CDS Thicy_0188 NC_015581.1 183798 184604 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: abu:Abu_1209 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 183798..184604 Thioalkalimicrobium cyclicum ALM1 10718982 YP_004536444.1 CDS Thicy_0189 NC_015581.1 184601 185101 D KEGG: pna:Pnap_1456 hypothetical protein; hypothetical protein 184601..185101 Thioalkalimicrobium cyclicum ALM1 10718983 YP_004536445.1 CDS Thicy_0190 NC_015581.1 185102 186358 D KEGG: tgr:Tgr7_1387 major facilitator superfamily transport protein; major facilitator superfamily transport protein 185102..186358 Thioalkalimicrobium cyclicum ALM1 10718984 YP_004536446.1 CDS Thicy_0191 NC_015581.1 186385 187185 R PFAM: ABC-3; KEGG: tcx:Tcr_0575 hypothetical protein; ABC transporter permease complement(186385..187185) Thioalkalimicrobium cyclicum ALM1 10718985 YP_004536447.1 CDS Thicy_0192 NC_015581.1 187178 187939 R KEGG: asa:ASA_0557 ABC-type high-affinity zinc transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(187178..187939) Thioalkalimicrobium cyclicum ALM1 10718986 YP_004536448.1 CDS Thicy_0193 NC_015581.1 187971 188948 D PFAM: ABC transporter metal-binding lipoprotein; KEGG: tcx:Tcr_0577 periplasmic solute binding protein; heavy metal ABC transporter substrate-binding protein 187971..188948 Thioalkalimicrobium cyclicum ALM1 10718987 YP_004536449.1 CDS Thicy_0194 NC_015581.1 188932 189684 D hypothetical protein 188932..189684 Thioalkalimicrobium cyclicum ALM1 10718988 YP_004536450.1 CDS Thicy_0195 NC_015581.1 189730 191208 D KEGG: tcx:Tcr_0579 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufB 189730..191208 Thioalkalimicrobium cyclicum ALM1 10718989 YP_004536451.1 CDS Thicy_0196 NC_015581.1 191287 192045 D TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: tcx:Tcr_0580 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core; FeS assembly ATPase SufC 191287..192045 Thioalkalimicrobium cyclicum ALM1 10718990 YP_004536452.1 CDS Thicy_0197 NC_015581.1 192011 193351 D KEGG: tcx:Tcr_0581 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD; FeS assembly protein SufD 192011..193351 Thioalkalimicrobium cyclicum ALM1 10718991 YP_004536453.1 CDS Thicy_0198 NC_015581.1 193374 194591 D TIGRFAM: Cysteine desulfurase, SufS; KEGG: tcx:Tcr_0582 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SufS subfamily cysteine desulfurase 193374..194591 Thioalkalimicrobium cyclicum ALM1 10718992 YP_004536454.1 CDS Thicy_0199 NC_015581.1 194665 196038 D PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: tcx:Tcr_0584 UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 194665..196038 Thioalkalimicrobium cyclicum ALM1 10718993 YP_004536455.1 CDS Thicy_0200 NC_015581.1 196044 196997 D PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: tcx:Tcr_0585 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 196044..196997 Thioalkalimicrobium cyclicum ALM1 10718994 YP_004536456.1 CDS Thicy_0201 NC_015581.1 196978 197709 D PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: tcx:Tcr_0586 cell division protein FtsQ; Polypeptide-transport-associated domain-containing protein FtsQ-type 196978..197709 Thioalkalimicrobium cyclicum ALM1 10718995 YP_004536457.1 CDS Thicy_0202 NC_015581.1 197717 198961 D KEGG: tcx:Tcr_0587 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; cell division protein FtsA 197717..198961 Thioalkalimicrobium cyclicum ALM1 10718996 YP_004536458.1 CDS Thicy_0203 NC_015581.1 198982 199893 D TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: tcx:Tcr_0588 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 198982..199893 Thioalkalimicrobium cyclicum ALM1 10718997 YP_004536459.1 CDS Thicy_0204 NC_015581.1 199901 200332 R hypothetical protein complement(199901..200332) Thioalkalimicrobium cyclicum ALM1 10718998 YP_004536460.1 CDS Thicy_0205 NC_015581.1 200422 203178 D TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: tcx:Tcr_0589 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif; protein translocase subunit secA 200422..203178 Thioalkalimicrobium cyclicum ALM1 10718999 YP_004536461.1 CDS Thicy_0206 NC_015581.1 203201 204424 D PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: tcx:Tcr_0590 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; arginine biosynthesis bifunctional protein ArgJ 203201..204424 Thioalkalimicrobium cyclicum ALM1 10719000 YP_004536462.1 CDS Thicy_0207 NC_015581.1 204425 205384 D PFAM: Thiamine monophosphate synthase; NUDIX hydrolase domain; KEGG: tcx:Tcr_0592 hypothetical protein; thiamine monophosphate synthase 204425..205384 Thioalkalimicrobium cyclicum ALM1 10719001 YP_004536463.1 CDS Thicy_0208 NC_015581.1 205381 205989 R TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: tcx:Tcr_0594 dephospho-CoA kinase; dephospho-CoA kinase complement(205381..205989) Thioalkalimicrobium cyclicum ALM1 10719002 YP_004536464.1 CDS Thicy_0209 NC_015581.1 205986 206273 R PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: aco:Amico_0081 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(205986..206273) Thioalkalimicrobium cyclicum ALM1 10719003 YP_004536465.1 CDS Thicy_0210 NC_015581.1 206328 208136 D TIGRFAM: Asparagine synthase family amidotransferase; Asparagine synthase, glutamine-hydrolyzing; KEGG: tcx:Tcr_0595 asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; asparagine synthase family amidotransferase 206328..208136 Thioalkalimicrobium cyclicum ALM1 10719004 YP_004536466.1 CDS Thicy_0211 NC_015581.1 208202 208552 D KEGG: tcx:Tcr_0596 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin; glutaredoxin-like protein 208202..208552 Thioalkalimicrobium cyclicum ALM1 10719005 YP_004536467.1 CDS Thicy_0212 NC_015581.1 208582 209223 R SMART: Exonuclease; TIGRFAM: Ribonuclease T; KEGG: tcx:Tcr_0597 ribonuclease T; HAMAP: Ribonuclease T; PFAM: Exonuclease, RNase T/DNA polymerase III; Ribonuclease T complement(208582..209223) Thioalkalimicrobium cyclicum ALM1 10719006 YP_004536468.1 CDS Thicy_0213 NC_015581.1 209220 210503 R KEGG: tcx:Tcr_0598 N-acetylglutamate synthase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: GCN5-related N-acetyltransferase; Aspartate/glutamate/uridylate kinase; amino-acid N-acetyltransferase complement(209220..210503) Thioalkalimicrobium cyclicum ALM1 10719007 YP_004536469.1 CDS Thicy_0214 NC_015581.1 210622 212526 D PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: tcx:Tcr_0599 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 210622..212526 Thioalkalimicrobium cyclicum ALM1 10719008 YP_004536470.1 CDS Thicy_0215 NC_015581.1 212539 212937 D KEGG: tcx:Tcr_0600 hypothetical protein; hypothetical protein 212539..212937 Thioalkalimicrobium cyclicum ALM1 10719009 YP_004536471.1 CDS Thicy_0216 NC_015581.1 213025 213888 R KEGG: tcx:Tcr_0601 sulfur oxidation protein SoxA; sulfur oxidation protein SoxA complement(213025..213888) Thioalkalimicrobium cyclicum ALM1 10719010 YP_004536472.1 CDS Thicy_0217 NC_015581.1 213982 214293 R PFAM: Sulphur oxidation protein SoxZ; KEGG: tcx:Tcr_0602 hypothetical protein; sulfur oxidation protein SoxZ complement(213982..214293) Thioalkalimicrobium cyclicum ALM1 10719011 YP_004536473.1 CDS Thicy_0218 NC_015581.1 214353 214820 R KEGG: tcx:Tcr_0603 sulfur oxidation protein SoxY-like; sulfur oxidation protein SoxY-like protein complement(214353..214820) Thioalkalimicrobium cyclicum ALM1 10719012 YP_004536474.1 CDS Thicy_0219 NC_015581.1 214850 215233 R KEGG: tcx:Tcr_0604 cytochrome c, class I; cytochrome c, class I complement(214850..215233) Thioalkalimicrobium cyclicum ALM1 10719013 YP_004536475.1 CDS Thicy_0220 NC_015581.1 215443 216819 R PFAM: Peptidase M48, Ste24p; KEGG: tcx:Tcr_0605 peptidase M48, Ste24p; peptidase M48 Ste24p complement(215443..216819) Thioalkalimicrobium cyclicum ALM1 10719014 YP_004536476.1 CDS Thicy_0221 NC_015581.1 216883 217098 D PFAM: SirA-like; KEGG: cvi:CV_4331 hypothetical protein; SirA-like domain-containing protein 216883..217098 Thioalkalimicrobium cyclicum ALM1 10719015 YP_004536477.1 CDS Thicy_0222 NC_015581.1 217151 218035 D TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: tcx:Tcr_0607 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 217151..218035 Thioalkalimicrobium cyclicum ALM1 10719016 YP_004536478.1 CDS Thicy_0223 NC_015581.1 218073 219707 D HAMAP: Phosphoglucose isomerase (PGI); KEGG: tcx:Tcr_0608 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 218073..219707 Thioalkalimicrobium cyclicum ALM1 10719017 YP_004536479.1 CDS Thicy_0224 NC_015581.1 219709 221019 D TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: tcx:Tcr_0609 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; nucleotide sugar dehydrogenase 219709..221019 Thioalkalimicrobium cyclicum ALM1 10719018 YP_004536480.1 CDS Thicy_0225 NC_015581.1 221028 221789 D KEGG: tcx:Tcr_0610 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 221028..221789 Thioalkalimicrobium cyclicum ALM1 10719019 YP_004536481.1 CDS Thicy_0226 NC_015581.1 221860 223410 D TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: tcx:Tcr_0611 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; 2-isopropylmalate synthase 221860..223410 Thioalkalimicrobium cyclicum ALM1 10719020 YP_004536482.1 CDS Thicy_0227 NC_015581.1 223535 223936 D hypothetical protein 223535..223936 Thioalkalimicrobium cyclicum ALM1 10719021 YP_004536483.1 CDS Thicy_0228 NC_015581.1 223944 224441 D KEGG: mei:Msip34_2285 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 223944..224441 Thioalkalimicrobium cyclicum ALM1 10719022 YP_004536484.1 CDS Thicy_0229 NC_015581.1 224438 225283 R PFAM: Inositol monophosphatase; KEGG: tcx:Tcr_0614 inositol monophosphatase; inositol monophosphatase complement(224438..225283) Thioalkalimicrobium cyclicum ALM1 10719023 YP_004536485.1 CDS Thicy_0230 NC_015581.1 225344 226084 D KEGG: tcx:Tcr_0615 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; TrmH family RNA methyltransferase 225344..226084 Thioalkalimicrobium cyclicum ALM1 10719024 YP_004536486.1 CDS Thicy_0231 NC_015581.1 226094 226882 D KEGG: tcx:Tcr_0616 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase; serine O-acetyltransferase 226094..226882 Thioalkalimicrobium cyclicum ALM1 10719025 YP_004536487.1 CDS Thicy_0232 NC_015581.1 226941 227378 D KEGG: tcx:Tcr_0617 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator 226941..227378 Thioalkalimicrobium cyclicum ALM1 10719026 YP_004536488.1 CDS Thicy_0233 NC_015581.1 227392 227718 D KEGG: tcx:Tcr_0618 HesB/YadR/YfhF; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; iron-sulfur cluster assembly accessory protein 227392..227718 Thioalkalimicrobium cyclicum ALM1 10719027 YP_004536489.1 CDS Thicy_0234 NC_015581.1 227824 228228 D SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: pin:Ping_3326 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; nucleoside diphosphate kinase 227824..228228 Thioalkalimicrobium cyclicum ALM1 10719028 YP_004536490.1 CDS Thicy_0235 NC_015581.1 228240 229397 D TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: tcx:Tcr_0620 hypothetical protein; PFAM: Radical SAM; ribosomal RNA large subunit methyltransferase N 228240..229397 Thioalkalimicrobium cyclicum ALM1 10719029 YP_004536491.1 CDS Thicy_0236 NC_015581.1 229402 229794 D KEGG: tcx:Tcr_0621 hypothetical protein; hypothetical protein 229402..229794 Thioalkalimicrobium cyclicum ALM1 10719030 YP_004536492.1 CDS Thicy_0237 NC_015581.1 229815 231083 D PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: tcx:Tcr_0622 histidyl-tRNA synthetase; histidyl-tRNA synthetase 229815..231083 Thioalkalimicrobium cyclicum ALM1 10719031 YP_004536493.1 CDS Thicy_0238 NC_015581.1 231087 231728 D PFAM: Protein of unknown function DUF2133; Tetratricopeptide TPR-4; KEGG: tcx:Tcr_0623 hypothetical protein; hypothetical protein 231087..231728 Thioalkalimicrobium cyclicum ALM1 10719032 YP_004536494.1 CDS Thicy_0239 NC_015581.1 231725 232951 D KEGG: tcx:Tcr_0624 pyrrolo-quinoline quinone; TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; outer membrane assembly lipoprotein YfgL 231725..232951 Thioalkalimicrobium cyclicum ALM1 10719033 YP_004536495.1 CDS Thicy_0240 NC_015581.1 232944 234371 D TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: tcx:Tcr_0625 small GTP-binding protein domain-containing protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engA 232944..234371 Thioalkalimicrobium cyclicum ALM1 10719034 YP_004536496.1 CDS Thicy_0241 NC_015581.1 234470 238330 D PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; KEGG: tgr:Tgr7_2778 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 234470..238330 Thioalkalimicrobium cyclicum ALM1 10719035 YP_004536497.1 CDS Thicy_0242 NC_015581.1 238409 238720 R PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_0628 cytochrome c, class I; cytochrome c class I complement(238409..238720) Thioalkalimicrobium cyclicum ALM1 10719036 YP_004536498.1 CDS Thicy_0243 NC_015581.1 238806 239111 R PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_0629 cytochrome c, class I; cytochrome c class I complement(238806..239111) Thioalkalimicrobium cyclicum ALM1 10719037 YP_004536499.1 CDS Thicy_0244 NC_015581.1 239328 239501 D hypothetical protein 239328..239501 Thioalkalimicrobium cyclicum ALM1 10719038 YP_004536500.1 CDS Thicy_0245 NC_015581.1 239466 240482 R TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: tcx:Tcr_0630 GTPase EngC; PFAM: GTPase EngC; ribosome biogenesis GTPase RsgA complement(239466..240482) Thioalkalimicrobium cyclicum ALM1 10719039 YP_004536501.1 CDS Thicy_0246 NC_015581.1 240491 240832 R KEGG: tcx:Tcr_0631 transcriptional coactivator/pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; pterin-4-alpha-carbinolamine dehydratase complement(240491..240832) Thioalkalimicrobium cyclicum ALM1 10719040 YP_004536502.1 CDS Thicy_0247 NC_015581.1 240845 242107 R KEGG: tcx:Tcr_0632 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p; Ste24 endopeptidase complement(240845..242107) Thioalkalimicrobium cyclicum ALM1 10719041 YP_004536503.1 CDS Thicy_0248 NC_015581.1 242213 242758 D HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: tcx:Tcr_0633 oligoribonuclease; SMART: Exonuclease; oligoribonuclease 242213..242758 Thioalkalimicrobium cyclicum ALM1 10719042 YP_004536504.1 CDS Thicy_0249 NC_015581.1 242926 244623 D TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: tcx:Tcr_0634 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase large subunit, biosynthetic type 242926..244623 Thioalkalimicrobium cyclicum ALM1 10719043 YP_004536505.1 CDS Thicy_0250 NC_015581.1 244629 245120 D manually curated; TIGRFAM: Acetolactate synthase, small subunit; KEGG: tcx:Tcr_0635 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; acetolactate synthase small subunit 244629..245120 Thioalkalimicrobium cyclicum ALM1 10719044 YP_004536506.1 CDS Thicy_0251 NC_015581.1 245219 246235 D PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: tcx:Tcr_0636 ketol-acid reductoisomerase; ketol-acid reductoisomerase 245219..246235 Thioalkalimicrobium cyclicum ALM1 10719045 YP_004536507.1 CDS Thicy_0252 NC_015581.1 246289 247698 R TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 2; KEGG: tcx:Tcr_1958 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit complement(246289..247698) Thioalkalimicrobium cyclicum ALM1 10719046 YP_004536508.1 CDS Thicy_0253 NC_015581.1 247712 252187 R KEGG: tcx:Tcr_1957 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; glutamate synthase complement(247712..252187) Thioalkalimicrobium cyclicum ALM1 10719047 YP_004536509.1 CDS Thicy_0254 NC_015581.1 252533 253882 D KEGG: maq:Maqu_0302 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; glutamate dehydrogenase 252533..253882 Thioalkalimicrobium cyclicum ALM1 10719048 YP_004536510.1 CDS Thicy_0255 NC_015581.1 253970 255523 R PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: tcx:Tcr_1956 phosphoglyceromutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(253970..255523) Thioalkalimicrobium cyclicum ALM1 10719049 YP_004536511.1 CDS Thicy_0256 NC_015581.1 255631 256086 D KEGG: tcx:Tcr_1955 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 255631..256086 Thioalkalimicrobium cyclicum ALM1 10719050 YP_004536512.1 CDS Thicy_0257 NC_015581.1 256083 256346 D KEGG: grxC; glutaredoxin; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin; glutaredoxin 3 256083..256346 Thioalkalimicrobium cyclicum ALM1 10719051 YP_004536513.1 CDS Thicy_0258 NC_015581.1 256348 256830 D TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: tcx:Tcr_1953 protein-export protein SecB; PFAM: Bacterial protein export chaperone SecB; protein-export protein secB 256348..256830 Thioalkalimicrobium cyclicum ALM1 10719052 YP_004536514.1 CDS Thicy_0259 NC_015581.1 256867 257877 D KEGG: tcx:Tcr_1952 glycerol-3-phosphate dehydrogenase (NAD(P)+); HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; glycerol-3-phosphate dehydrogenase 256867..257877 Thioalkalimicrobium cyclicum ALM1 10719053 YP_004536515.1 CDS Thicy_0260 NC_015581.1 257880 258353 R PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: tcx:Tcr_1951 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(257880..258353) Thioalkalimicrobium cyclicum ALM1 10719054 YP_004536516.1 CDS Thicy_0261 NC_015581.1 258370 259317 D KEGG: tcx:Tcr_1950 dihydroorotate dehydrogenase family protein; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; dihydroorotate dehydrogenase family protein 258370..259317 Thioalkalimicrobium cyclicum ALM1 10719055 YP_004536517.1 CDS Thicy_0262 NC_015581.1 259342 260532 D SMART: RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; KEGG: tcx:Tcr_1949 tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; tyrosyl-tRNA synthetase 259342..260532 Thioalkalimicrobium cyclicum ALM1 10719056 YP_004536518.1 CDS Thicy_0263 NC_015581.1 266463 267284 D KEGG: tcx:Tcr_1948 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; biotin-(acetyl-CoA carboxylase) ligase 266463..267284 Thioalkalimicrobium cyclicum ALM1 10719062 YP_004536519.1 CDS Thicy_0264 NC_015581.1 267271 268098 D TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: gpb:HDN1F_08070 putative transcriptional regulator; PFAM: Bordetella pertussis Bvg accessory factor; putative Baf family transcriptional acitvator 267271..268098 Thioalkalimicrobium cyclicum ALM1 10719063 YP_004536520.1 CDS Thicy_0265 NC_015581.1 268374 268889 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: tcx:Tcr_1946 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; 3-hydroxydecanoyl-ACP dehydratase 268374..268889 Thioalkalimicrobium cyclicum ALM1 10719065 YP_004536521.1 CDS Thicy_0266 NC_015581.1 268891 270111 D KEGG: tcx:Tcr_1945 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-ketoacyl-ACP synthase I 268891..270111 Thioalkalimicrobium cyclicum ALM1 10719066 YP_004536522.1 CDS Thicy_0267 NC_015581.1 270221 270847 R KEGG: tcx:Tcr_1944 hypothetical protein; hypothetical protein complement(270221..270847) Thioalkalimicrobium cyclicum ALM1 10719067 YP_004536523.1 CDS Thicy_0268 NC_015581.1 270957 272003 R TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: tcx:Tcr_1942 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core; signal recognition particle-docking protein FtsY complement(270957..272003) Thioalkalimicrobium cyclicum ALM1 10719068 YP_004536524.1 CDS Thicy_0269 NC_015581.1 272119 273498 D KEGG: tcx:Tcr_1941 peptidase M16-like; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; processing peptidase 272119..273498 Thioalkalimicrobium cyclicum ALM1 10719069 YP_004536525.1 CDS Thicy_0270 NC_015581.1 273498 274850 D PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: tcx:Tcr_1940 peptidase M16-like; peptidase M16 domain-containing protein 273498..274850 Thioalkalimicrobium cyclicum ALM1 10719070 YP_004536526.1 CDS Thicy_0271 NC_015581.1 274837 275484 D TIGRFAM: Conserved hypothetical protein CHP00095; KEGG: tcx:Tcr_1932 hypothetical protein; PFAM: Protein of unknown function methylase putative; methyltransferase 274837..275484 Thioalkalimicrobium cyclicum ALM1 10719071 YP_004536527.1 CDS Thicy_0272 NC_015581.1 275530 276012 D PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: tcx:Tcr_1930 coenzyme A biosynthesis protein; phosphopantetheine adenylyltransferase 275530..276012 Thioalkalimicrobium cyclicum ALM1 10719072 YP_004536528.1 CDS Thicy_0273 NC_015581.1 276002 276781 R KEGG: tcx:Tcr_0042 hypothetical protein; hypothetical protein complement(276002..276781) Thioalkalimicrobium cyclicum ALM1 10719073 YP_004536529.1 CDS Thicy_0274 NC_015581.1 276978 277463 D KEGG: tcx:Tcr_1902 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520; hypothetical protein 276978..277463 Thioalkalimicrobium cyclicum ALM1 10719074 YP_004536530.1 CDS Thicy_0275 NC_015581.1 277478 278392 D TIGRFAM: Acetylglutamate kinase; KEGG: tcx:Tcr_1899 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; acetylglutamate kinase 277478..278392 Thioalkalimicrobium cyclicum ALM1 10719075 YP_004536531.1 CDS Thicy_0276 NC_015581.1 278567 279337 D PFAM: Protein of unknown function DUF81; KEGG: tcx:Tcr_1898 hypothetical protein; hypothetical protein 278567..279337 Thioalkalimicrobium cyclicum ALM1 10719076 YP_004536532.1 CDS Thicy_0277 NC_015581.1 279321 279965 R PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: tcx:Tcr_1895 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(279321..279965) Thioalkalimicrobium cyclicum ALM1 10719077 YP_004536533.1 CDS Thicy_0278 NC_015581.1 280211 281311 D KEGG: tcx:Tcr_1893 oxidoreductase FAD/NAD(P)-binding; PFAM: FAD-binding, type 1; Oxidoreductase FAD/NAD(P)-binding; NADPH--hemoprotein reductase 280211..281311 Thioalkalimicrobium cyclicum ALM1 10719078 YP_004536534.1 CDS Thicy_0279 NC_015581.1 281305 282822 R TIGRFAM: exopolyphosphatase; KEGG: tcx:Tcr_1892 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(281305..282822) Thioalkalimicrobium cyclicum ALM1 10719079 YP_004536535.1 CDS Thicy_0280 NC_015581.1 282913 285060 R PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: tcx:Tcr_1891 polyphosphate kinase; polyphosphate kinase complement(282913..285060) Thioalkalimicrobium cyclicum ALM1 10719080 YP_004536536.1 CDS Thicy_0281 NC_015581.1 285220 286287 D PFAM: Uncharacterised protein family UPF0118; KEGG: tcx:Tcr_2070 hypothetical protein; hypothetical protein 285220..286287 Thioalkalimicrobium cyclicum ALM1 10719081 YP_004536537.1 CDS Thicy_0282 NC_015581.1 286421 288229 D PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type 286421..288229 Thioalkalimicrobium cyclicum ALM1 10719082 YP_004536538.1 CDS Thicy_0283 NC_015581.1 288288 289088 D PFAM: SapC; KEGG: SapC-related protein; SapC family protein 288288..289088 Thioalkalimicrobium cyclicum ALM1 10719083 YP_004536539.1 CDS Thicy_0284 NC_015581.1 289185 289646 D PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: pmy:Pmen_4378 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 289185..289646 Thioalkalimicrobium cyclicum ALM1 10719084 YP_004536540.1 CDS Thicy_0285 NC_015581.1 289823 377431 D KEGG: dal:Dalk_0372 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; Protein of unknown function DUF11; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; Adenoviral fiber protein (repeat/shaft region); Bacterial transferase hexapeptide repeat; RtxA toxin; filamentous hemagglutinin family outer membrane protein 289823..377431 Thioalkalimicrobium cyclicum ALM1 10719085 YP_004536541.1 CDS Thicy_0286 NC_015581.1 377494 378156 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: jan:Jann_2130 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 377494..378156 Thioalkalimicrobium cyclicum ALM1 10719086 YP_004536542.1 CDS Thicy_0287 NC_015581.1 378173 378529 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: jan:Jann_2129 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 378173..378529 Thioalkalimicrobium cyclicum ALM1 10719087 YP_004536543.1 CDS Thicy_0288 NC_015581.1 378530 378913 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: jan:Jann_2128 hypothetical protein; biopolymer transport protein ExbD/TolR 378530..378913 Thioalkalimicrobium cyclicum ALM1 10719088 YP_004536544.1 CDS Thicy_0289 NC_015581.1 378914 379519 D TIGRFAM: TonB, C-terminal; KEGG: aeh:Mlg_1845 TonB family protein; TonB family protein 378914..379519 Thioalkalimicrobium cyclicum ALM1 10719089 YP_004536545.1 CDS Thicy_0290 NC_015581.1 379531 380007 R KEGG: tcx:Tcr_1922 hypothetical protein; hypothetical protein complement(379531..380007) Thioalkalimicrobium cyclicum ALM1 10719090 YP_004536546.1 CDS Thicy_0291 NC_015581.1 380035 380865 R PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: tcx:Tcr_1921 formamidopyrimidine-DNA glycosylase; Formamidopyrimidine-DNA glycosylase complement(380035..380865) Thioalkalimicrobium cyclicum ALM1 10719091 YP_004536547.1 CDS Thicy_0292 NC_015581.1 380858 381718 R PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0782 hypothetical protein; hypothetical protein complement(380858..381718) Thioalkalimicrobium cyclicum ALM1 10719092 YP_004536548.1 CDS Thicy_0293 NC_015581.1 381817 382548 D KEGG: tcx:Tcr_1865 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; dihydrofolate reductase 381817..382548 Thioalkalimicrobium cyclicum ALM1 10719093 YP_004536549.1 CDS Thicy_0294 NC_015581.1 382558 384243 R TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: tcx:Tcr_1715 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(382558..384243) Thioalkalimicrobium cyclicum ALM1 10719094 YP_004536550.1 CDS Thicy_0295 NC_015581.1 384367 384753 D TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: tcx:Tcr_1850 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; glycine cleavage system H protein 384367..384753 Thioalkalimicrobium cyclicum ALM1 10719095 YP_004536551.1 CDS Thicy_0296 NC_015581.1 384746 385945 D KEGG: tcx:Tcr_1849 methyltransferase small; PFAM: Methyltransferase small; SMART: Pseudouridine synthase/archaeosine transglycosylase; methyltransferase small 384746..385945 Thioalkalimicrobium cyclicum ALM1 10719096 YP_004536552.1 CDS Thicy_0297 NC_015581.1 385955 387325 R KEGG: tcx:Tcr_1887 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(385955..387325) Thioalkalimicrobium cyclicum ALM1 10719097 YP_004536553.1 CDS Thicy_0298 NC_015581.1 387336 388667 R KEGG: tcx:Tcr_1889 dihydroorotase; PFAM: Amidohydrolase 3; Allantoinase complement(387336..388667) Thioalkalimicrobium cyclicum ALM1 10719098 YP_004536554.1 CDS Thicy_0299 NC_015581.1 388949 389239 D KEGG: mmw:Mmwyl1_4364 hypothetical protein; hypothetical protein 388949..389239 Thioalkalimicrobium cyclicum ALM1 10719099 YP_004536555.1 CDS Thicy_0300 NC_015581.1 389229 390569 D PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: mmw:Mmwyl1_4363 HipA domain-containing protein; HipA domain-containing protein 389229..390569 Thioalkalimicrobium cyclicum ALM1 10719100 YP_004536556.1 CDS Thicy_0301 NC_015581.1 390566 391258 R KEGG: bge:BC1002_0486 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal; hypothetical protein complement(390566..391258) Thioalkalimicrobium cyclicum ALM1 10719101 YP_004536557.1 CDS Thicy_0302 NC_015581.1 391386 392180 D KEGG: tcx:Tcr_1833 hypothetical protein; TIGRFAM: polyphosphate kinase 2; PFAM: Polyphosphate kinase 2; polyphosphate kinase 2 391386..392180 Thioalkalimicrobium cyclicum ALM1 10719102 YP_004536558.1 CDS Thicy_0303 NC_015581.1 392211 392438 D KEGG: tcx:Tcr_1832 hypothetical protein; hypothetical protein 392211..392438 Thioalkalimicrobium cyclicum ALM1 10719103 YP_004536559.1 CDS Thicy_0304 NC_015581.1 392497 393654 D KEGG: tcx:Tcr_0225 SoxH protein-like; SoxH protein-like protein 392497..393654 Thioalkalimicrobium cyclicum ALM1 10719104 YP_004536560.1 CDS Thicy_0305 NC_015581.1 393655 394179 R KEGG: tcx:Tcr_0964 hypothetical protein; hypothetical protein complement(393655..394179) Thioalkalimicrobium cyclicum ALM1 10719105 YP_004536561.1 CDS Thicy_0306 NC_015581.1 394190 395413 R PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: tcx:Tcr_0419 YeeE/YedE; hypothetical protein complement(394190..395413) Thioalkalimicrobium cyclicum ALM1 10719106 YP_004536562.1 CDS Thicy_0307 NC_015581.1 395407 395742 R KEGG: ppd:Ppro_0863 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator complement(395407..395742) Thioalkalimicrobium cyclicum ALM1 10719107 YP_004536563.1 CDS Thicy_0308 NC_015581.1 395895 396917 D KEGG: tgr:Tgr7_1924 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 395895..396917 Thioalkalimicrobium cyclicum ALM1 10719108 YP_004536564.1 CDS Thicy_0309 NC_015581.1 396917 398119 D PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_1866 major facilitator transporter; major facilitator superfamily protein 396917..398119 Thioalkalimicrobium cyclicum ALM1 10719109 YP_004536565.1 CDS Thicy_0310 NC_015581.1 398133 399254 R KEGG: tcx:Tcr_1769 HPr kinase; hypothetical protein complement(398133..399254) Thioalkalimicrobium cyclicum ALM1 10719110 YP_004536566.1 CDS Thicy_0311 NC_015581.1 399263 400186 R PFAM: ATP-grasp fold, RimK-type; KEGG: pin:Ping_2322 RimK domain-containing protein ATP-grasp; RimK domain-containing protein ATP-grasp complement(399263..400186) Thioalkalimicrobium cyclicum ALM1 10719111 YP_004536567.1 CDS Thicy_0312 NC_015581.1 400173 401771 R PFAM: Aminoglycoside phosphotransferase; KEGG: tcx:Tcr_1767 hypothetical protein; aminoglycoside phosphotransferase complement(400173..401771) Thioalkalimicrobium cyclicum ALM1 10719112 YP_004536568.1 CDS Thicy_0313 NC_015581.1 401768 402133 R KEGG: tcx:Tcr_1766 hypothetical protein; hypothetical protein complement(401768..402133) Thioalkalimicrobium cyclicum ALM1 10719113 YP_004536569.1 CDS Thicy_0314 NC_015581.1 402303 403118 D TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: tcx:Tcr_0571 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 402303..403118 Thioalkalimicrobium cyclicum ALM1 10719114 YP_004536570.1 CDS Thicy_0315 NC_015581.1 403115 403948 D PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: tcx:Tcr_0572 thymidylate synthase; Thymidylate synthase 403115..403948 Thioalkalimicrobium cyclicum ALM1 10719115 YP_004536571.1 CDS Thicy_0316 NC_015581.1 403945 404475 D KEGG: tcx:Tcr_0573 dihydrofolate reductase; PFAM: Dihydrofolate reductase region; dihydrofolate reductase 403945..404475 Thioalkalimicrobium cyclicum ALM1 10719116 YP_004536572.1 CDS Thicy_0317 NC_015581.1 404472 404786 R KEGG: sil:SPO1232 H-NS family DNA-binding protein; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS complement(404472..404786) Thioalkalimicrobium cyclicum ALM1 10719117 YP_004536573.1 CDS Thicy_0318 NC_015581.1 405015 405737 R KEGG: tcx:Tcr_1831 hypothetical protein; hypothetical protein complement(405015..405737) Thioalkalimicrobium cyclicum ALM1 10719118 YP_004536574.1 CDS Thicy_0319 NC_015581.1 405760 407055 R KEGG: tcx:Tcr_1830 dihydroorotase, multifunctional complex type; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase 1; dihydroorotase, multifunctional complex type complement(405760..407055) Thioalkalimicrobium cyclicum ALM1 10719119 YP_004536575.1 CDS Thicy_0320 NC_015581.1 407052 408092 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: tcx:Tcr_1829 aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(407052..408092) Thioalkalimicrobium cyclicum ALM1 10719120 YP_004536576.1 CDS Thicy_0321 NC_015581.1 408089 408598 R KEGG: maq:Maqu_3762 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Uracil phosphoribosyltransferase complement(408089..408598) Thioalkalimicrobium cyclicum ALM1 10719121 YP_004536577.1 CDS Thicy_0322 NC_015581.1 408595 409065 R SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: tcx:Tcr_1828 Holliday junction resolvase YqgF; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase complement(408595..409065) Thioalkalimicrobium cyclicum ALM1 10719122 YP_004536578.1 CDS Thicy_0323 NC_015581.1 409058 409654 R KEGG: tcx:Tcr_1827 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179; hypothetical protein complement(409058..409654) Thioalkalimicrobium cyclicum ALM1 10719123 YP_004536579.1 CDS Thicy_0324 NC_015581.1 409718 410761 R KEGG: tcx:Tcr_1826 ApbE-like lipoprotein; manually curated; PFAM: ApbE-like lipoprotein; ApbE family lipoprotein complement(409718..410761) Thioalkalimicrobium cyclicum ALM1 10719124 YP_004536580.1 CDS Thicy_0325 NC_015581.1 410766 411734 R PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: tcx:Tcr_1825 glutathione synthetase; glutathione synthetase complement(410766..411734) Thioalkalimicrobium cyclicum ALM1 10719125 YP_004536581.1 CDS Thicy_0326 NC_015581.1 411977 413425 D PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: tkm:TK90_1676 protein of unknown function DUF404; hypothetical protein 411977..413425 Thioalkalimicrobium cyclicum ALM1 10719126 YP_004536582.1 CDS Thicy_0327 NC_015581.1 413415 414359 D PFAM: Protein of unknown function DUF403, bacteria; KEGG: tkm:TK90_1675 protein of unknown function DUF403; hypothetical protein 413415..414359 Thioalkalimicrobium cyclicum ALM1 10719127 YP_004536583.1 CDS Thicy_0328 NC_015581.1 414395 415438 D PFAM: Uncharacterised conserved protein UCP012641; KEGG: maq:Maqu_3036 hypothetical protein; hypothetical protein 414395..415438 Thioalkalimicrobium cyclicum ALM1 10719128 YP_004536584.1 CDS Thicy_0329 NC_015581.1 415435 416868 R KEGG: tcx:Tcr_1817 hypothetical protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; YjeF-like protein complement(415435..416868) Thioalkalimicrobium cyclicum ALM1 10719129 YP_004536585.1 CDS Thicy_0330 NC_015581.1 416971 417126 R TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: amc:MADE_00056 50S ribosomal protein L33; PFAM: Ribosomal protein L33; 50S ribosomal protein L33 complement(416971..417126) Thioalkalimicrobium cyclicum ALM1 10719130 YP_004536586.1 CDS Thicy_0331 NC_015581.1 417139 417375 R TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: tcx:Tcr_1918 ribosomal protein L28; PFAM: Ribosomal protein L28; 50S ribosomal protein L28 complement(417139..417375) Thioalkalimicrobium cyclicum ALM1 10719131 YP_004536587.1 CDS Thicy_0332 NC_015581.1 417526 418203 R KEGG: tcx:Tcr_1917 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; DNA repair protein RadC complement(417526..418203) Thioalkalimicrobium cyclicum ALM1 10719132 YP_004536588.1 CDS Thicy_0333 NC_015581.1 418249 418860 R KEGG: tcx:Tcr_1840 methionine biosynthesis MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW; methionine biosynthesis protein MetW complement(418249..418860) Thioalkalimicrobium cyclicum ALM1 10719133 YP_004536589.1 CDS Thicy_0334 NC_015581.1 418857 419990 R PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: tcx:Tcr_1839 homoserine O-acetyltransferase; homoserine O-acetyltransferase complement(418857..419990) Thioalkalimicrobium cyclicum ALM1 10719134 YP_004536590.1 CDS Thicy_0335 NC_015581.1 420018 420587 R PFAM: Protein of unknown function YGGT; KEGG: tcx:Tcr_1838 hypothetical protein; hypothetical protein complement(420018..420587) Thioalkalimicrobium cyclicum ALM1 10719135 YP_004536591.1 CDS Thicy_0336 NC_015581.1 420584 421411 R TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: tcx:Tcr_1837 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(420584..421411) Thioalkalimicrobium cyclicum ALM1 10719136 YP_004536592.1 CDS Thicy_0337 NC_015581.1 421492 421842 D TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: tcx:Tcr_1890 hypothetical protein; PFAM: Protein of unknown function DUF37; hypothetical protein 421492..421842 Thioalkalimicrobium cyclicum ALM1 10719137 YP_004536593.1 CDS Thicy_0338 NC_015581.1 421981 422931 R KEGG: tcx:Tcr_1875 putative GTP cyclohydrolase; PFAM: Protein of unknown function DUF198; GTP cyclohydrolase I complement(421981..422931) Thioalkalimicrobium cyclicum ALM1 10719138 YP_004536594.1 CDS Thicy_0339 NC_015581.1 423007 424089 R PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; KEGG: tcx:Tcr_1874 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K complement(423007..424089) Thioalkalimicrobium cyclicum ALM1 10719139 YP_004536595.1 CDS Thicy_0340 NC_015581.1 424070 425419 R KEGG: tcx:Tcr_1873 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; malate dehydrogenase complement(424070..425419) Thioalkalimicrobium cyclicum ALM1 10719140 YP_004536596.1 CDS Thicy_0341 NC_015581.1 425503 425901 R KEGG: esa:ESA_04083 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(425503..425901) Thioalkalimicrobium cyclicum ALM1 10719141 YP_004536597.1 CDS Thicy_0342 NC_015581.1 426049 427095 R PFAM: Aldo/keto reductase; KEGG: tcx:Tcr_1541 aldo/keto reductase; aldo/keto reductase complement(426049..427095) Thioalkalimicrobium cyclicum ALM1 10719142 YP_004536598.1 CDS Thicy_0343 NC_015581.1 427123 427485 R PFAM: Protein of unknown function DUF2237; KEGG: chl:Chy400_3719 hypothetical protein; hypothetical protein complement(427123..427485) Thioalkalimicrobium cyclicum ALM1 10719143 YP_004536599.1 CDS Thicy_0344 NC_015581.1 427544 428827 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_2046 thiol-disulfide isomerase and thioredoxins-like; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(427544..428827) Thioalkalimicrobium cyclicum ALM1 10719144 YP_004536600.1 CDS Thicy_0345 NC_015581.1 428877 429641 R KEGG: tgr:Tgr7_3142 hypothetical protein; hypothetical protein complement(428877..429641) Thioalkalimicrobium cyclicum ALM1 10719145 YP_004536601.1 CDS Thicy_0346 NC_015581.1 429812 471352 D PFAM: Filamentous haemagglutinin, bacterial; KEGG: cch:Cag_0616 parallel beta-helix repeat-containing protein; hemagluttinin repeat-containing protein 429812..471352 Thioalkalimicrobium cyclicum ALM1 10719146 YP_004536602.1 CDS Thicy_0347 NC_015581.1 471468 472214 D PFAM: SapC; KEGG: cch:Cag_0613 SapC-related protein; SapC family protein 471468..472214 Thioalkalimicrobium cyclicum ALM1 10719147 YP_004536603.1 CDS Thicy_0348 NC_015581.1 472286 473908 D PFAM: Outer membrane efflux protein; KEGG: cch:Cag_0615 outer membrane protein-like; outer membrane efflux protein 472286..473908 Thioalkalimicrobium cyclicum ALM1 10719148 YP_004536604.1 CDS Thicy_0349 NC_015581.1 473936 474754 D KEGG: cch:Cag_1409 membrane-fusion protein-like; hypothetical protein 473936..474754 Thioalkalimicrobium cyclicum ALM1 10719149 YP_004536605.1 CDS Thicy_0350 NC_015581.1 474804 484337 D PFAM: Filamentous haemagglutinin, bacterial; KEGG: cch:Cag_0616 parallel beta-helix repeat-containing protein; hemagluttinin repeat-containing protein 474804..484337 Thioalkalimicrobium cyclicum ALM1 10719150 YP_004536606.1 CDS Thicy_0351 NC_015581.1 484346 486178 D PFAM: Biotin/lipoyl attachment; KEGG: cch:Cag_1408 membrane-fusion protein-like; biotin/lipoyl attachment domain-containing protein 484346..486178 Thioalkalimicrobium cyclicum ALM1 10719151 YP_004536607.1 CDS Thicy_0352 NC_015581.1 486182 488326 D PFAM: Secretion protein HlyD; KEGG: cch:Cag_1407 M50 family peptidase; secretion protein HlyD family protein 486182..488326 Thioalkalimicrobium cyclicum ALM1 10719152 YP_004536608.1 CDS Thicy_0353 NC_015581.1 488329 490284 D PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; KEGG: cch:Cag_1563 preprotein translocase subunit SecA; SecA DEAD domain-containing protein 488329..490284 Thioalkalimicrobium cyclicum ALM1 10719153 YP_004536609.1 CDS Thicy_0354 NC_015581.1 490347 492515 R PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: rsq:Rsph17025_3306 hypothetical protein; catalase-peroxidase complement(490347..492515) Thioalkalimicrobium cyclicum ALM1 10719154 YP_004536610.1 CDS Thicy_0355 NC_015581.1 492774 495461 D TIGRFAM: Peptidase M1, alanyl aminopeptidase; KEGG: tcx:Tcr_1485 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; aminopeptidase N 492774..495461 Thioalkalimicrobium cyclicum ALM1 10719155 YP_004536611.1 CDS Thicy_0356 NC_015581.1 495466 496818 D KEGG: tcx:Tcr_1484 hypothetical protein; hypothetical protein 495466..496818 Thioalkalimicrobium cyclicum ALM1 10719156 YP_004536612.1 CDS Thicy_0357 NC_015581.1 496834 498096 R PFAM: Phosphofructokinase; KEGG: tcx:Tcr_1583 6-phosphofructokinase; phosphofructokinase complement(496834..498096) Thioalkalimicrobium cyclicum ALM1 10719157 YP_004536613.1 CDS Thicy_0358 NC_015581.1 498113 499279 R SMART: 3'-5' exonuclease; TIGRFAM: Ribonuclease D; KEGG: tcx:Tcr_1582 3'-5' exonuclease; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; ribonuclease D complement(498113..499279) Thioalkalimicrobium cyclicum ALM1 10719158 YP_004536614.1 CDS Thicy_0359 NC_015581.1 499492 500337 D PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: tcx:Tcr_1998 integral membrane protein; hypothetical protein 499492..500337 Thioalkalimicrobium cyclicum ALM1 10719159 YP_004536615.1 CDS Thicy_0360 NC_015581.1 500434 501837 D TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: tcx:Tcr_1581 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 500434..501837 Thioalkalimicrobium cyclicum ALM1 10719160 YP_004536616.1 CDS Thicy_0361 NC_015581.1 501860 502153 D KEGG: tcx:Tcr_1220 hypothetical protein; hypothetical protein 501860..502153 Thioalkalimicrobium cyclicum ALM1 10719161 YP_004536617.1 CDS Thicy_0362 NC_015581.1 502147 504333 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_0601 TonB-dependent receptor; TonB-dependent receptor 502147..504333 Thioalkalimicrobium cyclicum ALM1 10719162 YP_004536618.1 CDS Thicy_0363 NC_015581.1 504305 505963 R KEGG: tcx:Tcr_0400 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1; 2-polyprenylphenol 6-hydroxylase complement(504305..505963) Thioalkalimicrobium cyclicum ALM1 10719163 YP_004536619.1 CDS Thicy_0365 NC_015581.1 506275 507033 R TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: tcx:Tcr_0402 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE complement(506275..507033) Thioalkalimicrobium cyclicum ALM1 10719165 YP_004536620.1 CDS Thicy_0366 NC_015581.1 507030 507419 R PFAM: Protein of unknown function DUF971; KEGG: tcx:Tcr_0403 hypothetical protein; hypothetical protein complement(507030..507419) Thioalkalimicrobium cyclicum ALM1 10719166 YP_004536621.1 CDS Thicy_0367 NC_015581.1 507438 508757 R SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: tcx:Tcr_0404 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2; ATP-dependent hsl protease ATP-binding subunit hslU complement(507438..508757) Thioalkalimicrobium cyclicum ALM1 10719167 YP_004536622.1 CDS Thicy_0368 NC_015581.1 508932 509987 D TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase; KEGG: sua:Saut_0247 selenophosphate synthase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; Selenide, water dikinase 508932..509987 Thioalkalimicrobium cyclicum ALM1 10719168 YP_004536623.1 CDS Thicy_0369 NC_015581.1 509987 511084 D TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: tcx:Tcr_1023 tRNA 2-selenouridine synthase; SMART: Rhodanese-like; tRNA 2-selenouridine synthase 509987..511084 Thioalkalimicrobium cyclicum ALM1 10719169 YP_004536624.1 CDS Thicy_0370 NC_015581.1 511121 511996 D KEGG: tcx:Tcr_0405 diaminopimelate epimerase; manually curated; TIGRFAM: Diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; diaminopimelate epimerase 511121..511996 Thioalkalimicrobium cyclicum ALM1 10719170 YP_004536625.1 CDS Thicy_0371 NC_015581.1 511986 512702 D PFAM: Protein of unknown function DUF484; KEGG: tcx:Tcr_0406 hypothetical protein; hypothetical protein 511986..512702 Thioalkalimicrobium cyclicum ALM1 10719171 YP_004536626.1 CDS Thicy_0372 NC_015581.1 512704 513693 D KEGG: tcx:Tcr_0409 phage integrase; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC 512704..513693 Thioalkalimicrobium cyclicum ALM1 10719172 YP_004536627.1 CDS Thicy_0373 NC_015581.1 513683 514240 D TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: tcx:Tcr_0410 ATP-dependent protease peptidase subunit; PFAM: Proteasome, subunit alpha/beta; ATP-dependent protease hslV 513683..514240 Thioalkalimicrobium cyclicum ALM1 10719173 YP_004536628.1 CDS Thicy_0374 NC_015581.1 514252 515790 R PFAM: Methyltransferase regulatory domain, predicted; KEGG: methyltransferase regulatory domain-containing protein; methyltransferase regulatory domain-containing protein complement(514252..515790) Thioalkalimicrobium cyclicum ALM1 10719174 YP_004536629.1 CDS Thicy_0375 NC_015581.1 515827 516693 R PFAM: Protein of unknown function DUF218; KEGG: tcx:Tcr_0413 hypothetical protein; hypothetical protein complement(515827..516693) Thioalkalimicrobium cyclicum ALM1 10719175 YP_004536630.1 CDS Thicy_0376 NC_015581.1 516808 519369 D TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: tcx:Tcr_0414 AAA ATPase; SMART: ATPase, AAA+ type, core; ATP-dependent chaperone ClpB 516808..519369 Thioalkalimicrobium cyclicum ALM1 10719176 YP_004536631.1 CDS Thicy_0377 NC_015581.1 519467 522040 R PFAM: AsmA; KEGG: nwa:Nwat_2097 AsmA family protein; AsmA family protein complement(519467..522040) Thioalkalimicrobium cyclicum ALM1 10719177 YP_004536632.1 CDS Thicy_0378 NC_015581.1 522123 522911 R PFAM: Alpha/beta hydrolase fold-1; KEGG: gme:Gmet_1468 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(522123..522911) Thioalkalimicrobium cyclicum ALM1 10719178 YP_004536633.1 CDS Thicy_0379 NC_015581.1 523051 523383 D PFAM: Small multidrug resistance protein; KEGG: gpb:HDN1F_14560 quaternary ammonium compound resistance protein; small multidrug resistance protein 523051..523383 Thioalkalimicrobium cyclicum ALM1 10719179 YP_004536634.1 CDS Thicy_0380 NC_015581.1 523658 523963 D KEGG: eca:ECA0126 hypothetical protein; hypothetical protein 523658..523963 Thioalkalimicrobium cyclicum ALM1 10719180 YP_004536635.1 CDS Thicy_0382 NC_015581.1 525084 525383 D KEGG: dat:HRM2_p00650 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2136; hypothetical protein 525084..525383 Thioalkalimicrobium cyclicum ALM1 10719182 YP_004536636.1 CDS Thicy_0383 NC_015581.1 525398 525766 D PFAM: Helix-turn-helix type 3; KEGG: vsa:VSAL_I1284 hypothetical protein; XRE family transcriptional regulator 525398..525766 Thioalkalimicrobium cyclicum ALM1 10719183 YP_004536637.1 CDS Thicy_0384 NC_015581.1 525857 526765 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_2185 LysR family transcriptional regulator; LysR family transcriptional regulator complement(525857..526765) Thioalkalimicrobium cyclicum ALM1 10719184 YP_004536638.1 CDS Thicy_0385 NC_015581.1 526848 528200 R KEGG: sun:SUN_1606 hypothetical protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; HipA N-terminal domain-containing protein complement(526848..528200) Thioalkalimicrobium cyclicum ALM1 10719185 YP_004536639.1 CDS Thicy_0386 NC_015581.1 528197 528457 R KEGG: bcm:Bcenmc03_5133 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(528197..528457) Thioalkalimicrobium cyclicum ALM1 10719186 YP_004536640.1 CDS Thicy_0387 NC_015581.1 528703 531054 D PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: tcx:Tcr_2184 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 528703..531054 Thioalkalimicrobium cyclicum ALM1 10719187 YP_004536641.1 CDS Thicy_0388 NC_015581.1 531230 532261 D PFAM: Bacterial transport system permease protein; KEGG: tcx:Tcr_0179 transport system permease protein; ABC transporter permease 531230..532261 Thioalkalimicrobium cyclicum ALM1 10719188 YP_004536642.1 CDS Thicy_0389 NC_015581.1 532268 533056 D PFAM: ABC transporter-like; KEGG: tcx:Tcr_0180 ABC transporter related; SMART: ATPase, AAA+ type, core; iron-chelate-transporting ATPase 532268..533056 Thioalkalimicrobium cyclicum ALM1 10719189 YP_004536643.1 CDS Thicy_0390 NC_015581.1 533053 534348 R PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: tcx:Tcr_0438 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase complement(533053..534348) Thioalkalimicrobium cyclicum ALM1 10719190 YP_004536644.1 CDS Thicy_0391 NC_015581.1 534363 535925 R KEGG: tcx:Tcr_0439 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(534363..535925) Thioalkalimicrobium cyclicum ALM1 10719191 YP_004536645.1 CDS Thicy_0392 NC_015581.1 535971 536219 R PFAM: Helix-turn-helix, Fis-type; KEGG: prw:PsycPRwf_1623 fis family transcriptional regulator; Fis family transcriptional regulator complement(535971..536219) Thioalkalimicrobium cyclicum ALM1 10719192 YP_004536646.1 CDS Thicy_0393 NC_015581.1 536213 537208 R KEGG: pmy:Pmen_0710 nifR3 family TIM-barrel protein; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein complement(536213..537208) Thioalkalimicrobium cyclicum ALM1 10719193 YP_004536647.1 CDS Thicy_0394 NC_015581.1 537214 538101 R TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: tcx:Tcr_0442 ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase complement(537214..538101) Thioalkalimicrobium cyclicum ALM1 10719194 YP_004536648.1 CDS Thicy_0395 NC_015581.1 538101 539447 R TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: tcx:Tcr_0443 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; acetyl-CoA carboxylase, biotin carboxylase complement(538101..539447) Thioalkalimicrobium cyclicum ALM1 10719195 YP_004536649.1 CDS Thicy_0396 NC_015581.1 539456 539917 R KEGG: tcx:Tcr_0444 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(539456..539917) Thioalkalimicrobium cyclicum ALM1 10719196 YP_004536650.1 CDS Thicy_0397 NC_015581.1 539960 540397 R PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: tcx:Tcr_0445 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase complement(539960..540397) Thioalkalimicrobium cyclicum ALM1 10719197 YP_004536651.1 CDS Thicy_0398 NC_015581.1 540626 542941 R HAMAP: Thiol:disulfide interchange protein dsbD; KEGG: tcx:Tcr_0446 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; Thiol:disulfide interchange protein dsbD complement(540626..542941) Thioalkalimicrobium cyclicum ALM1 10719198 YP_004536652.1 CDS Thicy_0399 NC_015581.1 543122 543667 D PFAM: FxsA cytoplasmic membrane protein; KEGG: tcx:Tcr_0447 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 543122..543667 Thioalkalimicrobium cyclicum ALM1 10719199 YP_004536653.1 CDS Thicy_0400 NC_015581.1 543712 544050 D hypothetical protein 543712..544050 Thioalkalimicrobium cyclicum ALM1 10719200 YP_004536654.1 CDS Thicy_0401 NC_015581.1 544087 545622 R PFAM: Methyltransferase regulatory domain, predicted; KEGG: sit:TM1040_3839 methyltransferase type 11; methyltransferase regulatory domain-containing protein complement(544087..545622) Thioalkalimicrobium cyclicum ALM1 10719201 YP_004536655.1 CDS Thicy_0402 NC_015581.1 545765 545977 R KEGG: nhl:Nhal_3367 hypothetical protein; hypothetical protein complement(545765..545977) Thioalkalimicrobium cyclicum ALM1 10719202 YP_004536656.1 CDS Thicy_0403 NC_015581.1 546097 546675 D KEGG: tcx:Tcr_1310 hypothetical protein; hypothetical protein 546097..546675 Thioalkalimicrobium cyclicum ALM1 10719203 YP_004536657.1 CDS Thicy_0404 NC_015581.1 546652 547344 R TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: bbe:BBR47_08490 pseudouridine synthase; SMART: RNA-binding S4; pseudouridine synthase Rsu complement(546652..547344) Thioalkalimicrobium cyclicum ALM1 10719204 YP_004536658.1 CDS Thicy_0405 NC_015581.1 547500 547748 D KEGG: hypothetical protein; hypothetical protein 547500..547748 Thioalkalimicrobium cyclicum ALM1 10719205 YP_004536659.1 CDS Thicy_0406 NC_015581.1 547745 548095 D PFAM: PemK-like protein; KEGG: transcriptional modulator of maze/toxin, mazf; PemK family protein 547745..548095 Thioalkalimicrobium cyclicum ALM1 10719206 YP_004536660.1 CDS Thicy_0407 NC_015581.1 548214 549173 R TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1925 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; molybdate ABC transporter ATPase complement(548214..549173) Thioalkalimicrobium cyclicum ALM1 10719207 YP_004536661.1 CDS Thicy_0408 NC_015581.1 549296 549694 R KEGG: kko:Kkor_1323 hypothetical protein; hypothetical protein complement(549296..549694) Thioalkalimicrobium cyclicum ALM1 10719208 YP_004536662.1 CDS Thicy_0409 NC_015581.1 549684 549896 R KEGG: tkm:TK90_0086 hypothetical protein; hypothetical protein complement(549684..549896) Thioalkalimicrobium cyclicum ALM1 10719209 YP_004536663.1 CDS Thicy_0410 NC_015581.1 549893 550201 R KEGG: kko:Kkor_1324 heavy metal transport/detoxification protein; hypothetical protein complement(549893..550201) Thioalkalimicrobium cyclicum ALM1 10719210 YP_004536664.1 CDS Thicy_0411 NC_015581.1 550185 550604 R KEGG: rmr:Rmar_2453 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; MerR family transcriptional regulator complement(550185..550604) Thioalkalimicrobium cyclicum ALM1 10719211 YP_004536665.1 CDS Thicy_0412 NC_015581.1 550726 551688 R KEGG: tkm:TK90_1656 rhodanese domain protein; rhodanese domain-containing protein complement(550726..551688) Thioalkalimicrobium cyclicum ALM1 10719212 YP_004536666.1 CDS Thicy_0413 NC_015581.1 551858 552739 D PFAM: Bile acid:sodium symporter; KEGG: tgr:Tgr7_1550 bile acid:sodium symporter; bile acid:sodium symporter 551858..552739 Thioalkalimicrobium cyclicum ALM1 10719213 YP_004536667.1 CDS Thicy_0414 NC_015581.1 552874 553569 R PFAM: Protein of unknown function DUF81; KEGG: rsq:Rsph17025_4316 hypothetical protein; hypothetical protein complement(552874..553569) Thioalkalimicrobium cyclicum ALM1 10719214 YP_004536668.1 CDS Thicy_0415 NC_015581.1 553574 554641 R SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1925 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; molybdate ABC transporter ATPase complement(553574..554641) Thioalkalimicrobium cyclicum ALM1 10719215 YP_004536669.1 CDS Thicy_0416 NC_015581.1 554651 555355 R KEGG: tkm:TK90_1628 molybdate ABC transporter, inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter permease complement(554651..555355) Thioalkalimicrobium cyclicum ALM1 10719216 YP_004536670.1 CDS Thicy_0417 NC_015581.1 555404 556150 R KEGG: mca:MCA1378 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(555404..556150) Thioalkalimicrobium cyclicum ALM1 10719217 YP_004536671.1 CDS Thicy_0418 NC_015581.1 556147 556947 R KEGG: hna:Hneap_0810 transcriptional regulator, ModE family; TIGRFAM: Molybdenum-pterin binding; PFAM: HTH transcriptional regulator, LysR; Transport-associated OB, type 1; ModE family transcriptional regulator complement(556147..556947) Thioalkalimicrobium cyclicum ALM1 10719218 YP_004536672.1 CDS Thicy_0419 NC_015581.1 557157 557399 D KEGG: dda:Dd703_4032 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 557157..557399 Thioalkalimicrobium cyclicum ALM1 10719219 YP_004536673.1 CDS Thicy_0420 NC_015581.1 557399 558715 D KEGG: xne:XNC1_4231 HipA protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; HipA N-terminal domain-containing protein 557399..558715 Thioalkalimicrobium cyclicum ALM1 10719220 YP_004536674.1 CDS Thicy_0421 NC_015581.1 558719 559825 R KEGG: aeh:Mlg_2709 bile acid:sodium symporter; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter; arsenical-resistance protein complement(558719..559825) Thioalkalimicrobium cyclicum ALM1 10719221 YP_004536675.1 CDS Thicy_0422 NC_015581.1 559896 561278 R KEGG: amt:Amet_2978 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; two component, sigma54 specific, transcriptional regulator, Fis family complement(559896..561278) Thioalkalimicrobium cyclicum ALM1 10719222 YP_004536676.1 CDS Thicy_0423 NC_015581.1 561275 562729 R KEGG: gfo:GFO_0729 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(561275..562729) Thioalkalimicrobium cyclicum ALM1 10719223 YP_004536677.1 CDS Thicy_0424 NC_015581.1 562787 563704 R KEGG: tcx:Tcr_1871 beta-lactamase-like; beta-lactamase-like protein complement(562787..563704) Thioalkalimicrobium cyclicum ALM1 10719224 YP_004536678.1 CDS Thicy_0425 NC_015581.1 563931 564827 R PFAM: Porin, Gram-negative type; KEGG: tgr:Tgr7_2784 putative porin; porin complement(563931..564827) Thioalkalimicrobium cyclicum ALM1 10719225 YP_004536679.1 CDS Thicy_0426 NC_015581.1 565156 566043 R KEGG: mgm:Mmc1_3535 phosphonate ABC transporter, periplasmic phosphonate-binding protein; hypothetical protein complement(565156..566043) Thioalkalimicrobium cyclicum ALM1 10719226 YP_004536680.1 CDS Thicy_0427 NC_015581.1 566036 567922 R KEGG: tcx:Tcr_1761 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(566036..567922) Thioalkalimicrobium cyclicum ALM1 10719227 YP_004536681.1 CDS Thicy_0428 NC_015581.1 567926 568528 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1759 thioredoxin, putative; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(567926..568528) Thioalkalimicrobium cyclicum ALM1 10719228 YP_004536682.1 CDS Thicy_0429 NC_015581.1 568525 569208 R KEGG: tcx:Tcr_1757 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(568525..569208) Thioalkalimicrobium cyclicum ALM1 10719229 YP_004536683.1 CDS Thicy_0430 NC_015581.1 569308 569889 D PFAM: NUDIX hydrolase domain; KEGG: tcx:Tcr_1756 ADP-ribose diphosphatase NudE; NUDIX hydrolase 569308..569889 Thioalkalimicrobium cyclicum ALM1 10719230 YP_004536684.1 CDS Thicy_0431 NC_015581.1 569886 570710 D KEGG: hha:Hhal_2058 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; PFAM: Inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase 569886..570710 Thioalkalimicrobium cyclicum ALM1 10719231 YP_004536685.1 CDS Thicy_0432 NC_015581.1 570774 572057 R KEGG: tcx:Tcr_1570 glutamate-1-semialdehyde-2,1-aminomutase; manually curated; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; glutamate-1-semialdehyde 2,1-aminomutase complement(570774..572057) Thioalkalimicrobium cyclicum ALM1 10719232 YP_004536686.1 CDS Thicy_0433 NC_015581.1 572074 572493 R KEGG: lch:Lcho_0088 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein complement(572074..572493) Thioalkalimicrobium cyclicum ALM1 10719233 YP_004536687.1 CDS Thicy_0434 NC_015581.1 572509 573006 R PFAM: Redoxin; KEGG: tcx:Tcr_1569 putative thioredoxin; redoxin domain-containing protein complement(572509..573006) Thioalkalimicrobium cyclicum ALM1 10719234 YP_004536688.1 CDS Thicy_0435 NC_015581.1 573060 573725 R PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: tcx:Tcr_1568 ribose-5-phosphate isomerase A; ribose-5-phosphate isomerase A complement(573060..573725) Thioalkalimicrobium cyclicum ALM1 10719235 YP_004536689.1 CDS Thicy_0436 NC_015581.1 573867 574301 D hypothetical protein 573867..574301 Thioalkalimicrobium cyclicum ALM1 10719236 YP_004536690.1 CDS Thicy_0437 NC_015581.1 574316 576751 R SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: tcx:Tcr_1548 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; anti-sigma H sporulation factor LonB complement(574316..576751) Thioalkalimicrobium cyclicum ALM1 10719237 YP_004536691.1 CDS Thicy_0438 NC_015581.1 576842 577387 D KEGG: tcx:Tcr_1547 molybdopterin binding domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; molybdenum cofactor synthesis domain-containing protein 576842..577387 Thioalkalimicrobium cyclicum ALM1 10719238 YP_004536692.1 CDS Thicy_0439 NC_015581.1 577380 578345 D TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: tcx:Tcr_1546 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 577380..578345 Thioalkalimicrobium cyclicum ALM1 10719239 YP_004536693.1 CDS Thicy_0440 NC_015581.1 578391 579500 D TIGRFAM: Chorismate synthase; KEGG: tcx:Tcr_1538 chorismate synthase; PFAM: Chorismate synthase; chorismate synthase 578391..579500 Thioalkalimicrobium cyclicum ALM1 10719240 YP_004536694.1 CDS Thicy_0441 NC_015581.1 579484 580677 D PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_1537 major facilitator transporter; major facilitator superfamily protein 579484..580677 Thioalkalimicrobium cyclicum ALM1 10719241 YP_004536695.1 CDS Thicy_0442 NC_015581.1 580697 581092 D TIGRFAM: Glyoxalase I; KEGG: tcx:Tcr_1536 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 580697..581092 Thioalkalimicrobium cyclicum ALM1 10719242 YP_004536696.1 CDS Thicy_0443 NC_015581.1 581119 581430 D KEGG: tcx:Tcr_1534 hypothetical protein; HAMAP: Protein of unknown function DUF1255; PFAM: Protein of unknown function DUF1255; hypothetical protein 581119..581430 Thioalkalimicrobium cyclicum ALM1 10719243 YP_004536697.1 CDS Thicy_0445 NC_015581.1 581723 582727 R TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: tcx:Tcr_1530 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase complement(581723..582727) Thioalkalimicrobium cyclicum ALM1 10719245 YP_004536698.1 CDS Thicy_0446 NC_015581.1 582760 583533 R KEGG: tcx:Tcr_1624 TonB-like; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TonB family protein complement(582760..583533) Thioalkalimicrobium cyclicum ALM1 10719246 YP_004536699.1 CDS Thicy_0447 NC_015581.1 583533 583916 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tcx:Tcr_1623 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(583533..583916) Thioalkalimicrobium cyclicum ALM1 10719247 YP_004536700.1 CDS Thicy_0448 NC_015581.1 583919 584371 R KEGG: tcx:Tcr_1622 MotA/TolQ/ExbB proton channel; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB complement(583919..584371) Thioalkalimicrobium cyclicum ALM1 10719248 YP_004536701.1 CDS Thicy_0449 NC_015581.1 584567 585574 D KEGG: tcx:Tcr_1621 beta-lactamase-like; beta-lactamase-like protein 584567..585574 Thioalkalimicrobium cyclicum ALM1 10719249 YP_004536702.1 CDS Thicy_0450 NC_015581.1 585624 586457 R TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: tcx:Tcr_1620 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB complement(585624..586457) Thioalkalimicrobium cyclicum ALM1 10719250 YP_004536703.1 CDS Thicy_0451 NC_015581.1 586475 586894 R PFAM: RDD; KEGG: tcx:Tcr_1619 RDD; RDD domain-containing protein complement(586475..586894) Thioalkalimicrobium cyclicum ALM1 10719251 YP_004536704.1 CDS Thicy_0452 NC_015581.1 586959 587627 D KEGG: tcx:Tcr_1618 hypothetical protein; hypothetical protein 586959..587627 Thioalkalimicrobium cyclicum ALM1 10719252 YP_004536705.1 CDS Thicy_0453 NC_015581.1 587678 587998 R KEGG: tcx:Tcr_1617 hypothetical protein; hypothetical protein complement(587678..587998) Thioalkalimicrobium cyclicum ALM1 10719253 YP_004536706.1 CDS Thicy_0454 NC_015581.1 588320 589780 D SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: tcx:Tcr_1616 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; inosine-5'-monophosphate dehydrogenase 588320..589780 Thioalkalimicrobium cyclicum ALM1 10719254 YP_004536707.1 CDS Thicy_0455 NC_015581.1 589855 591435 D PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: tcx:Tcr_1615 GMP synthase; GMP synthase 589855..591435 Thioalkalimicrobium cyclicum ALM1 10719255 YP_004536708.1 CDS Thicy_0456 NC_015581.1 591475 591819 D hypothetical protein 591475..591819 Thioalkalimicrobium cyclicum ALM1 10719256 YP_004536709.1 CDS Thicy_0457 NC_015581.1 591800 592336 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sbp:Sbal223_1381 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein 591800..592336 Thioalkalimicrobium cyclicum ALM1 10719257 YP_004536710.1 CDS Thicy_0458 NC_015581.1 592444 594357 D HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: tcx:Tcr_1609 heat shock protein 90; SMART: ATP-binding region, ATPase-like; chaperone protein htpG 592444..594357 Thioalkalimicrobium cyclicum ALM1 10719258 YP_004536711.1 CDS Thicy_0459 NC_015581.1 594557 595261 R PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: llo:LLO_2064 macrophage infectivity potentiator; FKBP-type peptidyl-prolyl isomerase domain-containing protein complement(594557..595261) Thioalkalimicrobium cyclicum ALM1 10719259 YP_004536712.1 CDS Thicy_0460 NC_015581.1 595419 596063 R PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: tcx:Tcr_0655 pseudouridine synthase; pseudouridine synthase complement(595419..596063) Thioalkalimicrobium cyclicum ALM1 10719260 YP_004536713.1 CDS Thicy_0461 NC_015581.1 596225 596716 D PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: hna:Hneap_1675 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 596225..596716 Thioalkalimicrobium cyclicum ALM1 10719261 YP_004536714.1 CDS Thicy_0462 NC_015581.1 596823 597152 R KEGG: tcx:Tcr_0972 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(596823..597152) Thioalkalimicrobium cyclicum ALM1 10719262 YP_004536715.1 CDS Thicy_0463 NC_015581.1 597242 597967 R PFAM: ABC transporter-like; KEGG: tcx:Tcr_0973 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase complement(597242..597967) Thioalkalimicrobium cyclicum ALM1 10719263 YP_004536716.1 CDS Thicy_0464 NC_015581.1 597967 598536 R manually curated; TIGRFAM: Cell envelope biogenesis YhbN; KEGG: tcx:Tcr_0974 OstA-like protein; PFAM: OstA-like protein; lipopolysaccharide transport periplasmic protein LptA complement(597967..598536) Thioalkalimicrobium cyclicum ALM1 10719264 YP_004536717.1 CDS Thicy_0465 NC_015581.1 598514 598939 R PFAM: Protein of unknown function DUF1239; hypothetical protein complement(598514..598939) Thioalkalimicrobium cyclicum ALM1 10719265 YP_004536718.1 CDS Thicy_0466 NC_015581.1 599099 599623 R KEGG: tcx:Tcr_0976 phosphatase KdsC; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(599099..599623) Thioalkalimicrobium cyclicum ALM1 10719266 YP_004536719.1 CDS Thicy_0467 NC_015581.1 599637 600626 R KEGG: tcx:Tcr_0977 K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter complement(599637..600626) Thioalkalimicrobium cyclicum ALM1 10719267 YP_004536720.1 CDS Thicy_0468 NC_015581.1 600772 601401 D KEGG: tcx:Tcr_0978 hypothetical protein; hypothetical protein 600772..601401 Thioalkalimicrobium cyclicum ALM1 10719268 YP_004536721.1 CDS Thicy_0469 NC_015581.1 601437 602228 D PFAM: ABC transporter-like; KEGG: tcx:Tcr_0979 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 601437..602228 Thioalkalimicrobium cyclicum ALM1 10719269 YP_004536722.1 CDS Thicy_0470 NC_015581.1 602228 603001 D KEGG: tcx:Tcr_0980 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; hypothetical protein 602228..603001 Thioalkalimicrobium cyclicum ALM1 10719270 YP_004536723.1 CDS Thicy_0471 NC_015581.1 603015 603485 D PFAM: Mammalian cell entry related; KEGG: tcx:Tcr_0981 hypothetical protein; mammalian cell entry domain-containing protein 603015..603485 Thioalkalimicrobium cyclicum ALM1 10719271 YP_004536724.1 CDS Thicy_0472 NC_015581.1 603482 604096 D PFAM: Toluene tolerance; KEGG: tcx:Tcr_0982 toluene tolerance; toluene tolerance family protein 603482..604096 Thioalkalimicrobium cyclicum ALM1 10719272 YP_004536725.1 CDS Thicy_0473 NC_015581.1 604130 604396 D hypothetical protein 604130..604396 Thioalkalimicrobium cyclicum ALM1 10719273 YP_004536726.1 CDS Thicy_0474 NC_015581.1 604393 605325 D PFAM: ABC transporter-like; KEGG: tcx:Tcr_0984 ABC transporter related; SMART: ATPase, AAA+ type, core; sulfate-transporting ATPase 604393..605325 Thioalkalimicrobium cyclicum ALM1 10719274 YP_004536727.1 CDS Thicy_0475 NC_015581.1 605322 606083 D PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_0985 hypothetical protein; ABC transporter 605322..606083 Thioalkalimicrobium cyclicum ALM1 10719275 YP_004536728.1 CDS Thicy_0476 NC_015581.1 606098 606325 D PFAM: BolA-like protein; KEGG: tcx:Tcr_0986 BolA-like protein; BolA family protein 606098..606325 Thioalkalimicrobium cyclicum ALM1 10719276 YP_004536729.1 CDS Thicy_0477 NC_015581.1 606326 607585 D PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: tcx:Tcr_0987 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 606326..607585 Thioalkalimicrobium cyclicum ALM1 10719277 YP_004536730.1 CDS Thicy_0478 NC_015581.1 607601 608233 D PFAM: ATP phosphoribosyltransferase, catalytic region; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; HAMAP: ATP phosphoribosyltransferase; KEGG: tcx:Tcr_0988 ATP phosphoribosyltransferase catalytic subunit; ATP phosphoribosyltransferase 607601..608233 Thioalkalimicrobium cyclicum ALM1 10719278 YP_004536731.1 CDS Thicy_0479 NC_015581.1 608236 609543 D PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: tgr:Tgr7_0745 histidinol dehydrogenase; histidinol dehydrogenase 608236..609543 Thioalkalimicrobium cyclicum ALM1 10719279 YP_004536732.1 CDS Thicy_0480 NC_015581.1 609545 610654 D KEGG: tgr:Tgr7_0746 histidinol-phosphate aminotransferase; manually curated; TIGRFAM: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; HAMAP: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 609545..610654 Thioalkalimicrobium cyclicum ALM1 10719280 YP_004536733.1 CDS Thicy_0481 NC_015581.1 610671 611414 D KEGG: tcx:Tcr_0990 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 610671..611414 Thioalkalimicrobium cyclicum ALM1 10719281 YP_004536734.1 CDS Thicy_0482 NC_015581.1 611554 612168 D TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: tcx:Tcr_0991 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 611554..612168 Thioalkalimicrobium cyclicum ALM1 10719282 YP_004536735.1 CDS Thicy_0483 NC_015581.1 612168 613412 D PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: tcx:Tcr_0992 cytochrome b/b6-like; cytochrome b/b6 domain-containing protein 612168..613412 Thioalkalimicrobium cyclicum ALM1 10719283 YP_004536736.1 CDS Thicy_0484 NC_015581.1 613409 614077 D PFAM: Cytochrome c1; KEGG: tcx:Tcr_0993 cytochrome c1; cytochrome c1 613409..614077 Thioalkalimicrobium cyclicum ALM1 10719284 YP_004536737.1 CDS Thicy_0485 NC_015581.1 614176 615540 D KEGG: tcx:Tcr_0994 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core; DNA repair protein RadA 614176..615540 Thioalkalimicrobium cyclicum ALM1 10719285 YP_004536738.1 CDS Thicy_0486 NC_015581.1 615530 616348 R PFAM: Inositol monophosphatase; KEGG: tcx:Tcr_0995 inositol monophosphatase; inositol monophosphatase complement(615530..616348) Thioalkalimicrobium cyclicum ALM1 10719286 YP_004536739.1 CDS Thicy_0487 NC_015581.1 616367 617653 R PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: tcx:Tcr_0996 hypothetical protein; hypothetical protein complement(616367..617653) Thioalkalimicrobium cyclicum ALM1 10719287 YP_004536740.1 CDS Thicy_0488 NC_015581.1 617708 618502 R PFAM: Cytochrome c assembly protein; KEGG: tcx:Tcr_0997 cytochrome c assembly protein; cytochrome c assembly protein complement(617708..618502) Thioalkalimicrobium cyclicum ALM1 10719288 YP_004536741.1 CDS Thicy_0489 NC_015581.1 618633 620012 D TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: tcx:Tcr_0998 signal recognition particle protein; SMART: ATPase, AAA+ type, core; signal recognition particle protein 618633..620012 Thioalkalimicrobium cyclicum ALM1 10719289 YP_004536742.1 CDS Thicy_0490 NC_015581.1 620196 620432 D TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: ilo:IL1726 ribosomal protein S16; PFAM: Ribosomal protein S16; 30S ribosomal protein S16 620196..620432 Thioalkalimicrobium cyclicum ALM1 10719290 YP_004536743.1 CDS Thicy_0491 NC_015581.1 620452 620961 D TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: tcx:Tcr_0648 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; Ribosome maturation factor rimM 620452..620961 Thioalkalimicrobium cyclicum ALM1 10719291 YP_004536744.1 CDS Thicy_0492 NC_015581.1 620970 621656 D PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: tcx:Tcr_0649 tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 620970..621656 Thioalkalimicrobium cyclicum ALM1 10719292 YP_004536745.1 CDS Thicy_0493 NC_015581.1 621777 622121 D TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: tcx:Tcr_0650 50S ribosomal protein L19; PFAM: Ribosomal protein L19; 50S ribosomal protein L19 621777..622121 Thioalkalimicrobium cyclicum ALM1 10719293 YP_004536746.1 CDS Thicy_0494 NC_015581.1 622228 622986 D KEGG: hch:HCH_05292 putative FlgJ-related protein; putative FlgJ-like protein 622228..622986 Thioalkalimicrobium cyclicum ALM1 10719294 YP_004536747.1 CDS Thicy_0495 NC_015581.1 622976 623443 D PFAM: Protein of unknown function DUF785; KEGG: syp:SYNPCC7002_A0685 ribosomal protein S6 modification protein; hypothetical protein 622976..623443 Thioalkalimicrobium cyclicum ALM1 10719295 YP_004536748.1 CDS Thicy_0496 NC_015581.1 623477 624382 D TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: tkm:TK90_1766 alpha-L-glutamate ligase, RimK family; PFAM: ATP-grasp fold, RimK-type; 30S ribosomal protein S6 modification protein 623477..624382 Thioalkalimicrobium cyclicum ALM1 10719296 YP_004536749.1 CDS Thicy_0497 NC_015581.1 624388 625431 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: tcx:Tcr_2062 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 624388..625431 Thioalkalimicrobium cyclicum ALM1 10719297 YP_004536750.1 CDS Thicy_0498 NC_015581.1 625459 625980 R KEGG: tcx:Tcr_1567 hypothetical protein; hypothetical protein complement(625459..625980) Thioalkalimicrobium cyclicum ALM1 10719298 YP_004536751.1 CDS Thicy_0499 NC_015581.1 626034 626897 R TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Tetratricopeptide TPR-3; KEGG: tcx:Tcr_1595 thioredoxin; SMART: Tetratricopeptide repeat; thioredoxin complement(626034..626897) Thioalkalimicrobium cyclicum ALM1 10719299 YP_004536752.1 CDS Thicy_0500 NC_015581.1 626924 629512 R SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: tcx:Tcr_1594 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; DNA mismatch repair protein mutS complement(626924..629512) Thioalkalimicrobium cyclicum ALM1 10719300 YP_004536753.1 CDS Thicy_0501 NC_015581.1 629821 630327 D KEGG: abo:ABO_1802 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal; CinA domain-containing protein 629821..630327 Thioalkalimicrobium cyclicum ALM1 10719301 YP_004536754.1 CDS Thicy_0502 NC_015581.1 630483 631526 D SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: tcx:Tcr_1592 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; protein recA 630483..631526 Thioalkalimicrobium cyclicum ALM1 10719302 YP_004536755.1 CDS Thicy_0503 NC_015581.1 631510 632013 D KEGG: tcx:Tcr_1591 regulatory protein RecX; regulatory protein RecX 631510..632013 Thioalkalimicrobium cyclicum ALM1 10719303 YP_004536756.1 CDS Thicy_0504 NC_015581.1 632052 634649 D KEGG: tcx:Tcr_1590 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; alanyl-tRNA synthetase 632052..634649 Thioalkalimicrobium cyclicum ALM1 10719304 YP_004536757.1 CDS Thicy_0505 NC_015581.1 634712 635929 D KEGG: tcx:Tcr_1589 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; aspartate kinase 634712..635929 Thioalkalimicrobium cyclicum ALM1 10719305 YP_004536758.1 CDS Thicy_0506 NC_015581.1 636348 637535 R KEGG: tcx:Tcr_1081 4Fe-4S cluster binding; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; iron-sulfur cluster binding protein complement(636348..637535) Thioalkalimicrobium cyclicum ALM1 10719308 YP_004536759.1 CDS Thicy_0507 NC_015581.1 637578 638084 D KEGG: afr:AFE_1926 conserved hypothetical protein TIGR00150; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 637578..638084 Thioalkalimicrobium cyclicum ALM1 10719309 YP_004536760.1 CDS Thicy_0508 NC_015581.1 638212 639912 D KEGG: tcx:Tcr_1083 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup; cell wall hydrolase/autolysin 638212..639912 Thioalkalimicrobium cyclicum ALM1 10719310 YP_004536761.1 CDS Thicy_0509 NC_015581.1 639987 641795 D TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: tcx:Tcr_1084 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; DNA mismatch repair protein mutL 639987..641795 Thioalkalimicrobium cyclicum ALM1 10719311 YP_004536762.1 CDS Thicy_0510 NC_015581.1 641803 642774 D PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: tcx:Tcr_1085 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; tRNA dimethylallyltransferase 641803..642774 Thioalkalimicrobium cyclicum ALM1 10719312 YP_004536763.1 CDS Thicy_0511 NC_015581.1 642835 643107 D TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: tcx:Tcr_1086 host factor Hfq; PFAM: Like-Sm ribonucleoprotein, core; protein hfq 642835..643107 Thioalkalimicrobium cyclicum ALM1 10719313 YP_004536764.1 CDS Thicy_0512 NC_015581.1 643120 644430 D KEGG: tcx:Tcr_1087 small GTP-binding protein domain-containing protein; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; GTP-binding proten HflX 643120..644430 Thioalkalimicrobium cyclicum ALM1 10719314 YP_004536765.1 CDS Thicy_0513 NC_015581.1 644546 645781 D TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: tcx:Tcr_1090 HflK protein; SMART: Band 7 protein; HflK protein 644546..645781 Thioalkalimicrobium cyclicum ALM1 10719315 YP_004536766.1 CDS Thicy_0514 NC_015581.1 645783 646631 D TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: tcx:Tcr_1091 HflC protein; SMART: Band 7 protein; HflC protein 645783..646631 Thioalkalimicrobium cyclicum ALM1 10719316 YP_004536767.1 CDS Thicy_0515 NC_015581.1 646662 646865 D KEGG: tcx:Tcr_1092 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2065; hypothetical protein 646662..646865 Thioalkalimicrobium cyclicum ALM1 10719317 YP_004536768.1 CDS Thicy_0516 NC_015581.1 646890 648068 D HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: tcx:Tcr_1093 ATP phosphoribosyltransferase regulatory subunit; ATP phosphoribosyltransferase regulatory subunit 646890..648068 Thioalkalimicrobium cyclicum ALM1 10719318 YP_004536769.1 CDS Thicy_0517 NC_015581.1 648080 649396 D KEGG: tcx:Tcr_1094 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; adenylosuccinate synthetase 648080..649396 Thioalkalimicrobium cyclicum ALM1 10719319 YP_004536770.1 CDS Thicy_0518 NC_015581.1 649435 649650 R KEGG: tcx:Tcr_1218 SlyX; HAMAP: Protein slyX; PFAM: SlyX; protein slyX complement(649435..649650) Thioalkalimicrobium cyclicum ALM1 10719320 YP_004536771.1 CDS Thicy_0519 NC_015581.1 649652 651442 R PFAM: Peptidase M61; KEGG: tcx:Tcr_1217 peptidase M61; peptidase M61 domain-containing protein complement(649652..651442) Thioalkalimicrobium cyclicum ALM1 10719321 YP_004536772.1 CDS Thicy_0520 NC_015581.1 651573 652673 D PFAM: Mechanosensitive ion channel MscS; KEGG: pat:Patl_2842 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 651573..652673 Thioalkalimicrobium cyclicum ALM1 10719322 YP_004536773.1 CDS Thicy_0521 NC_015581.1 652670 653557 D KEGG: tcx:Tcr_1596 hypothetical protein; hypothetical protein 652670..653557 Thioalkalimicrobium cyclicum ALM1 10719323 YP_004536774.1 CDS Thicy_0522 NC_015581.1 653727 655142 D TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: tcx:Tcr_1216 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 653727..655142 Thioalkalimicrobium cyclicum ALM1 10719324 YP_004536775.1 CDS Thicy_0523 NC_015581.1 655188 656555 D SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: tcx:Tcr_1079 deoxyguanosinetriphosphate triphosphohydrolase-like protein; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Deoxyguanosinetriphosphate triphosphohydrolase-like protein 655188..656555 Thioalkalimicrobium cyclicum ALM1 10719325 YP_004536776.1 CDS Thicy_0524 NC_015581.1 657020 657481 D KEGG: saz:Sama_3557 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188; hypothetical protein 657020..657481 Thioalkalimicrobium cyclicum ALM1 10719327 YP_004536777.1 CDS Thicy_0525 NC_015581.1 657461 659101 R TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: psa:PST_4032 exodeoxyribonuclease V alpha chain; SMART: ATPase, AAA+ type, core; exodeoxyribonuclease V subunit alpha complement(657461..659101) Thioalkalimicrobium cyclicum ALM1 10719328 YP_004536778.1 CDS Thicy_0526 NC_015581.1 659103 662630 R KEGG: dps:DP1344 exodeoxyribonuclease V, beta chain; TIGRFAM: Exodeoxyribonuclease V, beta subunit; PFAM: DNA helicase, UvrD/REP type; exodeoxyribonuclease V subunit beta complement(659103..662630) Thioalkalimicrobium cyclicum ALM1 10719329 YP_004536779.1 CDS Thicy_0527 NC_015581.1 662617 665877 R TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: dps:DP1343 exodeoxyribonuclease V, gamma chain; PFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma complement(662617..665877) Thioalkalimicrobium cyclicum ALM1 10719330 YP_004536780.1 CDS Thicy_0528 NC_015581.1 666040 666888 R HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: tcx:Tcr_0723 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; bifunctional protein folD complement(666040..666888) Thioalkalimicrobium cyclicum ALM1 10719331 YP_004536781.1 CDS Thicy_0529 NC_015581.1 667482 668519 D KEGG: hha:Hhal_1311 helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix DNA-binding protein 667482..668519 Thioalkalimicrobium cyclicum ALM1 10719335 YP_004536782.1 CDS Thicy_0530 NC_015581.1 669050 669823 D KEGG: hypothetical protein; hypothetical protein 669050..669823 Thioalkalimicrobium cyclicum ALM1 10719336 YP_004536783.1 CDS Thicy_0531 NC_015581.1 669820 670725 D PFAM: Protein of unknown function DUF1814; KEGG: cch:Cag_1199 hypothetical protein; hypothetical protein 669820..670725 Thioalkalimicrobium cyclicum ALM1 10719337 YP_004536784.1 CDS Thicy_0532 NC_015581.1 670838 671227 D TIGRFAM: Addiction module antidote protein, HI1420; KEGG: mmw:Mmwyl1_3744 putative transcriptional regulator; addiction module antidote protein 670838..671227 Thioalkalimicrobium cyclicum ALM1 10719338 YP_004536785.1 CDS Thicy_0533 NC_015581.1 671656 672768 R KEGG: ppr:PBPRA1435 hypothetical protein; hypothetical protein complement(671656..672768) Thioalkalimicrobium cyclicum ALM1 10719339 YP_004536786.1 CDS Thicy_0534 NC_015581.1 673025 674833 D PFAM: Protein of unknown function DUF2081; Protein of unknown function DUF262; KEGG: slp:Slip_0088 protein of unknown function DUF2081; hypothetical protein 673025..674833 Thioalkalimicrobium cyclicum ALM1 10719340 YP_004536787.1 CDS Thicy_0535 NC_015581.1 674943 677357 D KEGG: tau:Tola_1180 type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; PFAM: DNA methylase, adenine-specific; type I restriction-modification system, M subunit 674943..677357 Thioalkalimicrobium cyclicum ALM1 10719341 YP_004536788.1 CDS Thicy_0536 NC_015581.1 677474 677761 D PFAM: Protein of unknown function DUF2136; KEGG: eba:ebA7093 hypothetical protein; hypothetical protein 677474..677761 Thioalkalimicrobium cyclicum ALM1 10719342 YP_004536789.1 CDS Thicy_0537 NC_015581.1 677758 678162 D KEGG: avn:Avin_17260 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; XRE family transcriptional regulator 677758..678162 Thioalkalimicrobium cyclicum ALM1 10719343 YP_004536790.1 CDS Thicy_0538 NC_015581.1 678134 679528 D PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: bid:Bind_2673 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 678134..679528 Thioalkalimicrobium cyclicum ALM1 10719344 YP_004536791.1 CDS Thicy_0539 NC_015581.1 679525 680157 D PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: maq:Maqu_3381 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 679525..680157 Thioalkalimicrobium cyclicum ALM1 10719345 YP_004536792.1 CDS Thicy_0540 NC_015581.1 680154 680321 R hypothetical protein complement(680154..680321) Thioalkalimicrobium cyclicum ALM1 10719346 YP_004536793.1 CDS Thicy_0541 NC_015581.1 680460 683558 D TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: tau:Tola_1185 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal; HsdR family type I site-specific deoxyribonuclease 680460..683558 Thioalkalimicrobium cyclicum ALM1 10719347 YP_004536794.1 CDS Thicy_0542 NC_015581.1 683559 684281 D PFAM: Protein of unknown function DUF45; KEGG: tau:Tola_1186 protein of unknown function DUF45; hypothetical protein 683559..684281 Thioalkalimicrobium cyclicum ALM1 10719348 YP_004536795.1 CDS Thicy_0543 NC_015581.1 685113 685796 D KEGG: mru:mru_0776 hypothetical protein; hypothetical protein 685113..685796 Thioalkalimicrobium cyclicum ALM1 10719349 YP_004536796.1 CDS Thicy_0544 NC_015581.1 685751 686788 R KEGG: tgr:Tgr7_1785 transcriptional regulator-like protein; transcriptional regulator-like protein complement(685751..686788) Thioalkalimicrobium cyclicum ALM1 10719350 YP_004536797.1 CDS Thicy_0545 NC_015581.1 686938 687723 D PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: hhe:HH0572 hypothetical protein; silent information regulator protein Sir2 686938..687723 Thioalkalimicrobium cyclicum ALM1 10719351 YP_004536798.1 CDS Thicy_0546 NC_015581.1 688235 689062 D KEGG: tmz:Tmz1t_0298 hypothetical protein; hypothetical protein 688235..689062 Thioalkalimicrobium cyclicum ALM1 10719352 YP_004536799.1 CDS Thicy_0547 NC_015581.1 689073 690392 D KEGG: tmz:Tmz1t_0299 hypothetical protein; hypothetical protein 689073..690392 Thioalkalimicrobium cyclicum ALM1 10719353 YP_004536800.1 CDS Thicy_0548 NC_015581.1 690775 692094 D PFAM: RDD; KEGG: ppy:PPE_03516 predicted membrane protein/domain protein; RDD domain-containing protein 690775..692094 Thioalkalimicrobium cyclicum ALM1 10719354 YP_004536801.1 CDS Thicy_0549 NC_015581.1 692259 694472 D KEGG: AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; AAA ATPase central domain-containing protein 692259..694472 Thioalkalimicrobium cyclicum ALM1 10719355 YP_004536802.1 CDS Thicy_0550 NC_015581.1 694559 695821 D KEGG: tdn:Suden_1853 ATPase; ATPase 694559..695821 Thioalkalimicrobium cyclicum ALM1 10719356 YP_004536803.1 CDS Thicy_0551 NC_015581.1 695935 696588 D KEGG: maq:Maqu_1310 hypothetical protein; hypothetical protein 695935..696588 Thioalkalimicrobium cyclicum ALM1 10719357 YP_004536804.1 CDS Thicy_0552 NC_015581.1 696585 697289 D PFAM: N-formylglutamate amidohydrolase; KEGG: rpb:RPB_4516 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 696585..697289 Thioalkalimicrobium cyclicum ALM1 10719358 YP_004536805.1 CDS Thicy_0554 NC_015581.1 697590 697979 R hypothetical protein complement(697590..697979) Thioalkalimicrobium cyclicum ALM1 10719360 YP_004536806.1 CDS Thicy_0555 NC_015581.1 698437 699081 D KEGG: hypothetical protein; hypothetical protein 698437..699081 Thioalkalimicrobium cyclicum ALM1 10719361 YP_004536807.1 CDS Thicy_0556 NC_015581.1 699205 700665 D KEGG: sun:SUN_2298 hypothetical protein; hypothetical protein 699205..700665 Thioalkalimicrobium cyclicum ALM1 10719362 YP_004536808.1 CDS Thicy_0557 NC_015581.1 700677 702350 D PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: cco:CCC13826_0951 thiamine-phosphate pyrophosphorylase; ATPase 700677..702350 Thioalkalimicrobium cyclicum ALM1 10719363 YP_004536809.1 CDS Thicy_0558 NC_015581.1 702353 703762 D PFAM: 5-methylcytosine restriction system component-like protein; KEGG: cco:CCC13826_0952 hypothetical protein; 5-methylcytosine restriction system component-like protein 702353..703762 Thioalkalimicrobium cyclicum ALM1 10719364 YP_004536810.1 CDS Thicy_0559 NC_015581.1 703755 704558 D KEGG: cpb:Cphamn1_2546 hypothetical protein; hypothetical protein 703755..704558 Thioalkalimicrobium cyclicum ALM1 10719365 YP_004536811.1 CDS Thicy_0560 NC_015581.1 704562 704846 D hypothetical protein 704562..704846 Thioalkalimicrobium cyclicum ALM1 10719366 YP_004536812.1 CDS Thicy_0561 NC_015581.1 704950 705654 R SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: tcx:Tcr_0930 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; DNA polymerase III subunit epsilon complement(704950..705654) Thioalkalimicrobium cyclicum ALM1 10719367 YP_004536813.1 CDS Thicy_0562 NC_015581.1 705732 706157 D PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: tcx:Tcr_0931 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 705732..706157 Thioalkalimicrobium cyclicum ALM1 10719368 YP_004536814.1 CDS Thicy_0563 NC_015581.1 706166 706702 D KEGG: tcx:Tcr_1335 hypothetical protein; hypothetical protein 706166..706702 Thioalkalimicrobium cyclicum ALM1 10719369 YP_004536815.1 CDS Thicy_0564 NC_015581.1 706785 710738 D TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Domain of unknown function DUF1605; Helicase-associated region; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_0950 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal; ATP-dependent helicase HrpA 706785..710738 Thioalkalimicrobium cyclicum ALM1 10719370 YP_004536816.1 CDS Thicy_0565 NC_015581.1 710801 711088 D hypothetical protein 710801..711088 Thioalkalimicrobium cyclicum ALM1 10719371 YP_004536817.1 CDS Thicy_0566 NC_015581.1 711128 712654 R PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; KEGG: cyt:cce_4682 putative phosphoglucomutases; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I complement(711128..712654) Thioalkalimicrobium cyclicum ALM1 10719372 YP_004536818.1 CDS Thicy_0567 NC_015581.1 712770 713252 D KEGG: cpc:Cpar_1634 Sel1 domain protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein 712770..713252 Thioalkalimicrobium cyclicum ALM1 10719373 YP_004536819.1 CDS Thicy_0568 NC_015581.1 713341 713628 D KEGG: dps:DP1779 hypothetical protein; hypothetical protein 713341..713628 Thioalkalimicrobium cyclicum ALM1 10719374 YP_004536820.1 CDS Thicy_0569 NC_015581.1 713632 714219 D PFAM: Protein of unknown function DUF2058; KEGG: tcx:Tcr_1070 putative nucleoprotein/polynucleotide-associated enzyme; hypothetical protein 713632..714219 Thioalkalimicrobium cyclicum ALM1 10719375 YP_004536821.1 CDS Thicy_0570 NC_015581.1 714209 715288 R KEGG: amc:MADE_01559 hypothetical protein; hypothetical protein complement(714209..715288) Thioalkalimicrobium cyclicum ALM1 10719376 YP_004536822.1 CDS Thicy_0571 NC_015581.1 715298 716236 R PFAM: Periplasmic binding protein; KEGG: tcx:Tcr_0962 periplasmic binding protein; ABC transporter substrate-binding protein complement(715298..716236) Thioalkalimicrobium cyclicum ALM1 10719377 YP_004536823.1 CDS Thicy_0572 NC_015581.1 716236 716844 R TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: tbd:Tbd_2718 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; cob(I)alamin adenosyltransferase complement(716236..716844) Thioalkalimicrobium cyclicum ALM1 10719378 YP_004536824.1 CDS Thicy_0573 NC_015581.1 716974 717768 D PFAM: Protein of unknown function DUF980; KEGG: tcx:Tcr_2033 hypothetical protein; hypothetical protein 716974..717768 Thioalkalimicrobium cyclicum ALM1 10719379 YP_004536825.1 CDS Thicy_0574 NC_015581.1 717780 718052 R PFAM: Protein of unknown function DUF2132; KEGG: spe:Spro_1318 hypothetical protein; hypothetical protein complement(717780..718052) Thioalkalimicrobium cyclicum ALM1 10719380 YP_004536826.1 CDS Thicy_0575 NC_015581.1 718057 718248 R PFAM: YaeQ; KEGG: pat:Patl_3118 YaeQ; YaeQ family protein complement(718057..718248) Thioalkalimicrobium cyclicum ALM1 10719381 YP_004536827.1 CDS Thicy_0576 NC_015581.1 718273 718614 R KEGG: rfr:Rfer_0180 HicB; HicB family protein complement(718273..718614) Thioalkalimicrobium cyclicum ALM1 10719382 YP_004536828.1 CDS Thicy_0577 NC_015581.1 718611 718865 R KEGG: rfr:Rfer_0179 HicA protein; HicA protein complement(718611..718865) Thioalkalimicrobium cyclicum ALM1 10719383 YP_004536829.1 CDS Thicy_0578 NC_015581.1 718969 720825 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: tcx:Tcr_0963 TonB-dependent receptor; TonB-dependent receptor plug complement(718969..720825) Thioalkalimicrobium cyclicum ALM1 10719384 YP_004536830.1 CDS Thicy_0579 NC_015581.1 721216 721443 R hypothetical protein complement(721216..721443) Thioalkalimicrobium cyclicum ALM1 10719385 YP_004536831.1 CDS Thicy_0580 NC_015581.1 721447 721875 R PFAM: Protein of unknown function DUF1841; KEGG: tcx:Tcr_0966 hypothetical protein; hypothetical protein complement(721447..721875) Thioalkalimicrobium cyclicum ALM1 10719386 YP_004536832.1 CDS Thicy_0581 NC_015581.1 721926 722567 R SMART: HhH-GPD domain; TIGRFAM: Endonuclease III/Nth; KEGG: tcx:Tcr_1030 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; endonuclease III complement(721926..722567) Thioalkalimicrobium cyclicum ALM1 10719387 YP_004536833.1 CDS Thicy_0582 NC_015581.1 722564 723280 R TIGRFAM: Electron transport complex, RnfE; HAMAP: Electron transport complex protein rnfE; KEGG: tcx:Tcr_1031 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfE complement(722564..723280) Thioalkalimicrobium cyclicum ALM1 10719388 YP_004536834.1 CDS Thicy_0583 NC_015581.1 723273 723896 R KEGG: tcx:Tcr_1032 electron transport complex, RnfABCDGE type, G subunit; TIGRFAM: Electron transport complex, RnfG; PFAM: FMN-binding; RnfABCDGE type electron transport complex subunit G complement(723273..723896) Thioalkalimicrobium cyclicum ALM1 10719389 YP_004536835.1 CDS Thicy_0584 NC_015581.1 723893 724921 R TIGRFAM: Electron transport complex, RnfD; HAMAP: Electron transport complex protein rnfD; KEGG: tcx:Tcr_1033 electron transport complex, RnfABCDGE type, D subunit; PFAM: NADH-quinone reductase NQR2/RnfD; Electron transport complex protein rnfD complement(723893..724921) Thioalkalimicrobium cyclicum ALM1 10719390 YP_004536836.1 CDS Thicy_0585 NC_015581.1 724914 726593 R TIGRFAM: Electron transport complex, RnfC; HAMAP: Electron transport complex protein rnfC; KEGG: tcx:Tcr_1034 electron transport complex, RnfABCDGE type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; electron transport complex protein RnfC complement(724914..726593) Thioalkalimicrobium cyclicum ALM1 10719391 YP_004536837.1 CDS Thicy_0586 NC_015581.1 726590 727168 R TIGRFAM: Electron transport complex, RnfB; HAMAP: Electron transport complex, RnfB, subgroup; KEGG: tcx:Tcr_1035 electron transport complex, RnfABCDGE type, B subunit; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Electron transport complex protein rnfB complement(726590..727168) Thioalkalimicrobium cyclicum ALM1 10719392 YP_004536838.1 CDS Thicy_0587 NC_015581.1 727165 727743 R TIGRFAM: Electron transport complex, RnfA; HAMAP: Electron transport complex protein rnfA; KEGG: tcx:Tcr_1036 electron transport complex, RnfABCDGE type, A subunit; PFAM: Electron transport complex, Rnf/Nqr; Electron transport complex protein rnfA complement(727165..727743) Thioalkalimicrobium cyclicum ALM1 10719393 YP_004536839.1 CDS Thicy_0588 NC_015581.1 727772 729820 R PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: tcx:Tcr_1037 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(727772..729820) Thioalkalimicrobium cyclicum ALM1 10719394 YP_004536840.1 CDS Thicy_0589 NC_015581.1 729886 731022 R PFAM: ATPase-like, ParA/MinD; KEGG: tcx:Tcr_1042 putative ATP-binding protein; ParA/MinD-like ATPase complement(729886..731022) Thioalkalimicrobium cyclicum ALM1 10719395 YP_004536841.1 CDS Thicy_0590 NC_015581.1 731113 731727 R TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: tcx:Tcr_1043 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain; Deoxycytidine triphosphate deaminase complement(731113..731727) Thioalkalimicrobium cyclicum ALM1 10719396 YP_004536842.1 CDS Thicy_0591 NC_015581.1 731744 732490 R KEGG: tcx:Tcr_1044 hypothetical protein; hypothetical protein complement(731744..732490) Thioalkalimicrobium cyclicum ALM1 10719397 YP_004536843.1 CDS Thicy_0592 NC_015581.1 732494 733171 R TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: pau:PA14_52050 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; phosphoribosylglycinamide formyltransferase complement(732494..733171) Thioalkalimicrobium cyclicum ALM1 10719398 YP_004536844.1 CDS Thicy_0593 NC_015581.1 733178 734218 R TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; Bacteriocin-type signal sequence motif; KEGG: tcx:Tcr_1046 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(733178..734218) Thioalkalimicrobium cyclicum ALM1 10719399 YP_004536845.1 CDS Thicy_0594 NC_015581.1 734334 735413 D PFAM: Protein of unknown function DUF2066; KEGG: tcx:Tcr_1047 hypothetical protein; hypothetical protein 734334..735413 Thioalkalimicrobium cyclicum ALM1 10719400 YP_004536846.1 CDS Thicy_0595 NC_015581.1 735434 736138 D TIGRFAM: Chromosomal replication control, regulator Hda; KEGG: tcx:Tcr_1048 chromosomal replication initiator protein DnaA; DnaA regulatory inactivator Hda 735434..736138 Thioalkalimicrobium cyclicum ALM1 10719401 YP_004536847.1 CDS Thicy_0596 NC_015581.1 736197 736700 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1049 thioredoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 736197..736700 Thioalkalimicrobium cyclicum ALM1 10719402 YP_004536848.1 CDS Thicy_0597 NC_015581.1 736711 737223 D KEGG: tcx:Tcr_0523 hypothetical protein; hypothetical protein 736711..737223 Thioalkalimicrobium cyclicum ALM1 10719403 YP_004536849.1 CDS Thicy_0598 NC_015581.1 737235 738548 D PFAM: Outer membrane efflux protein; KEGG: tcx:Tcr_0524 outer membrane efflux protein; outer membrane efflux protein 737235..738548 Thioalkalimicrobium cyclicum ALM1 10719404 YP_004536850.1 CDS Thicy_0599 NC_015581.1 738541 739080 D KEGG: tcx:Tcr_0525 hypothetical protein; hypothetical protein 738541..739080 Thioalkalimicrobium cyclicum ALM1 10719405 YP_004536851.1 CDS Thicy_0600 NC_015581.1 739073 739324 D KEGG: tcx:Tcr_1050 hypothetical protein; hypothetical protein 739073..739324 Thioalkalimicrobium cyclicum ALM1 10719406 YP_004536852.1 CDS Thicy_0601 NC_015581.1 739371 741086 R TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: tcx:Tcr_1075 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; prolyl-tRNA synthetase complement(739371..741086) Thioalkalimicrobium cyclicum ALM1 10719407 YP_004536853.1 CDS Thicy_0602 NC_015581.1 741231 741863 D TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: tcx:Tcr_1507 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 741231..741863 Thioalkalimicrobium cyclicum ALM1 10719408 YP_004536854.1 CDS Thicy_0603 NC_015581.1 741860 743332 D KEGG: tcx:Tcr_1506 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 741860..743332 Thioalkalimicrobium cyclicum ALM1 10719409 YP_004536855.1 CDS Thicy_0604 NC_015581.1 749191 749949 R PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: tcx:Tcr_0387 UBA/ThiF-type NAD/FAD binding fold protein; UBA/THIF-type NAD/FAD binding protein complement(749191..749949) Thioalkalimicrobium cyclicum ALM1 10719415 YP_004536856.1 CDS Thicy_0605 NC_015581.1 749960 750829 R KEGG: mmb:Mmol_2242 modification methylase, HemK family; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small; protein-(glutamine-N5) methyltransferase complement(749960..750829) Thioalkalimicrobium cyclicum ALM1 10719416 YP_004536857.1 CDS Thicy_0606 NC_015581.1 750833 751921 R TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: tcx:Tcr_0389 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor; peptide chain release factor 1 complement(750833..751921) Thioalkalimicrobium cyclicum ALM1 10719417 YP_004536858.1 CDS Thicy_0607 NC_015581.1 751945 753222 R TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: tcx:Tcr_0390 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; glutamyl-tRNA reductase complement(751945..753222) Thioalkalimicrobium cyclicum ALM1 10719418 YP_004536859.1 CDS Thicy_0608 NC_015581.1 753474 753962 D TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; KEGG: hna:Hneap_0194 L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; L-2,4-diaminobutyric acid acetyltransferase 753474..753962 Thioalkalimicrobium cyclicum ALM1 10719419 YP_004536860.1 CDS Thicy_0609 NC_015581.1 754038 755324 D TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; KEGG: hna:Hneap_0195 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III; diaminobutyrate/2-oxoglutarate aminotransferase 754038..755324 Thioalkalimicrobium cyclicum ALM1 10719420 YP_004536861.1 CDS Thicy_0610 NC_015581.1 755348 755740 D HAMAP: L-ectoine synthase; KEGG: hna:Hneap_0196 L-ectoine synthase; PFAM: Ectoine synthase; L-ectoine synthase 755348..755740 Thioalkalimicrobium cyclicum ALM1 10719421 YP_004536862.1 CDS Thicy_0611 NC_015581.1 755795 756376 R TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Signal transduction response regulator, receiver region; HTH transcriptional regulator, MerR; KEGG: dar:Daro_0562 excisionase/Xis, DNA-binding; SMART: Signal transduction response regulator, receiver region; response regulator receiver protein complement(755795..756376) Thioalkalimicrobium cyclicum ALM1 10719422 YP_004536863.1 CDS Thicy_0612 NC_015581.1 756607 756888 D PFAM: Heavy metal transport/detoxification protein; KEGG: tcx:Tcr_0383 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 756607..756888 Thioalkalimicrobium cyclicum ALM1 10719423 YP_004536864.1 CDS Thicy_0613 NC_015581.1 756893 759121 D SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: tcx:Tcr_0384 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA topoisomerase IV subunit A 756893..759121 Thioalkalimicrobium cyclicum ALM1 10719424 YP_004536865.1 CDS Thicy_0614 NC_015581.1 759153 759746 R PFAM: Methyltransferase type 11; KEGG: syn:slr1183 hypothetical protein; type 11 methyltransferase complement(759153..759746) Thioalkalimicrobium cyclicum ALM1 10719425 YP_004536866.1 CDS Thicy_0615 NC_015581.1 759774 760430 R KEGG: tcx:Tcr_0794 hypothetical protein; hypothetical protein complement(759774..760430) Thioalkalimicrobium cyclicum ALM1 10719426 YP_004536867.1 CDS Thicy_0616 NC_015581.1 760552 761967 D TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: tcx:Tcr_0795 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; 3-isopropylmalate dehydratase large subunit 760552..761967 Thioalkalimicrobium cyclicum ALM1 10719427 YP_004536868.1 CDS Thicy_0617 NC_015581.1 761979 762638 D TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: mmb:Mmol_0973 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; 3-isopropylmalate dehydratase small subunit 761979..762638 Thioalkalimicrobium cyclicum ALM1 10719428 YP_004536869.1 CDS Thicy_0618 NC_015581.1 762661 763734 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: tcx:Tcr_0797 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 762661..763734 Thioalkalimicrobium cyclicum ALM1 10719429 YP_004536870.1 CDS Thicy_0619 NC_015581.1 763746 764720 D PFAM: Peptidase M23; KEGG: tcx:Tcr_0798 peptidase M23B; peptidase M23 763746..764720 Thioalkalimicrobium cyclicum ALM1 10719430 YP_004536871.1 CDS Thicy_0620 NC_015581.1 764814 765833 D TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: tcx:Tcr_0800 aspartate-semialdehyde dehydrogenase, USG-1 related; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; aspartate-semialdehyde dehydrogenase 764814..765833 Thioalkalimicrobium cyclicum ALM1 10719431 YP_004536872.1 CDS Thicy_0621 NC_015581.1 765833 766615 D TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: tcx:Tcr_0801 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 765833..766615 Thioalkalimicrobium cyclicum ALM1 10719432 YP_004536873.1 CDS Thicy_0622 NC_015581.1 766609 767238 D KEGG: nve:NEMVE_v1g145157 hypothetical protein; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 766609..767238 Thioalkalimicrobium cyclicum ALM1 10719433 YP_004536874.1 CDS Thicy_0623 NC_015581.1 767248 768471 D PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: tcx:Tcr_0803 tryptophan synthase subunit beta; Tryptophan synthase subunit beta 767248..768471 Thioalkalimicrobium cyclicum ALM1 10719434 YP_004536875.1 CDS Thicy_0624 NC_015581.1 768482 769309 D PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: tcx:Tcr_0804 tryptophan synthase, alpha subunit; Tryptophan synthase subunit alpha 768482..769309 Thioalkalimicrobium cyclicum ALM1 10719435 YP_004536876.1 CDS Thicy_0625 NC_015581.1 769306 770157 D PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: tcx:Tcr_0805 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 769306..770157 Thioalkalimicrobium cyclicum ALM1 10719436 YP_004536877.1 CDS Thicy_0626 NC_015581.1 770164 771489 D TIGRFAM: Folylpolyglutamate synthetase; KEGG: tcx:Tcr_0806 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 770164..771489 Thioalkalimicrobium cyclicum ALM1 10719437 YP_004536878.1 CDS Thicy_0627 NC_015581.1 771482 772057 D PFAM: Sporulation/cell division region, bacteria; KEGG: tcx:Tcr_0807 sporulation related; sporulation domain-containing protein 771482..772057 Thioalkalimicrobium cyclicum ALM1 10719438 YP_004536879.1 CDS Thicy_0628 NC_015581.1 772127 773650 D TIGRFAM: Amidophosphoribosyl transferase; KEGG: tcx:Tcr_0808 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; amidophosphoribosyltransferase 772127..773650 Thioalkalimicrobium cyclicum ALM1 10719439 YP_004536880.1 CDS Thicy_0629 NC_015581.1 773651 774832 D TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: tcx:Tcr_0809 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-succinylhomoserine sulfhydrylase 773651..774832 Thioalkalimicrobium cyclicum ALM1 10719440 YP_004536881.1 CDS Thicy_0630 NC_015581.1 774846 775145 R KEGG: asu:Asuc_1458 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain; RNA-binding, CRM domain-containing protein complement(774846..775145) Thioalkalimicrobium cyclicum ALM1 10719441 YP_004536882.1 CDS Thicy_0631 NC_015581.1 775232 775849 D KEGG: tcx:Tcr_0811 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase E 775232..775849 Thioalkalimicrobium cyclicum ALM1 10719442 YP_004536883.1 CDS Thicy_0632 NC_015581.1 775960 777930 D SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: tcx:Tcr_0812 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; ATP-dependent metalloprotease FtsH 775960..777930 Thioalkalimicrobium cyclicum ALM1 10719443 YP_004536884.1 CDS Thicy_0633 NC_015581.1 778004 778849 D TIGRFAM: Dihydropteroate synthase; KEGG: tcx:Tcr_0813 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; dihydropteroate synthase 778004..778849 Thioalkalimicrobium cyclicum ALM1 10719444 YP_004536885.1 CDS Thicy_0634 NC_015581.1 778846 780183 D TIGRFAM: Phosphoglucosamine mutase; KEGG: tcx:Tcr_0814 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; phosphoglucosamine mutase 778846..780183 Thioalkalimicrobium cyclicum ALM1 10719445 YP_004536886.1 CDS Thicy_0635 NC_015581.1 780252 781022 D PFAM: Triosephosphate isomerase; manually curated; KEGG: tcx:Tcr_0815 triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; triosephosphate isomerase 780252..781022 Thioalkalimicrobium cyclicum ALM1 10719446 YP_004536887.1 CDS Thicy_0636 NC_015581.1 781010 781321 D KEGG: tcx:Tcr_0816 preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 781010..781321 Thioalkalimicrobium cyclicum ALM1 10719447 YP_004536888.1 CDS Thicy_0637 NC_015581.1 781467 781823 D KEGG: tcx:Tcr_0817 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; NAD(P)H-quinone oxidoreductase subunit 3 781467..781823 Thioalkalimicrobium cyclicum ALM1 10719449 YP_004536889.1 CDS Thicy_0638 NC_015581.1 781814 782290 D PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: tcx:Tcr_0818 NADH dehydrogenase subunit B; NAD(P)H-quinone oxidoreductase subunit K 781814..782290 Thioalkalimicrobium cyclicum ALM1 10719450 YP_004536890.1 CDS Thicy_0639 NC_015581.1 782320 782973 D TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: tcx:Tcr_0819 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; NAD(P)H-quinone oxidoreductase subunit J 782320..782973 Thioalkalimicrobium cyclicum ALM1 10719451 YP_004536891.1 CDS Thicy_0640 NC_015581.1 782991 784244 D PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: tcx:Tcr_0820 NADH dehydrogenase subunit D; NAD(P)H-quinone oxidoreductase subunit H 782991..784244 Thioalkalimicrobium cyclicum ALM1 10719452 YP_004536892.1 CDS Thicy_0641 NC_015581.1 784241 784744 D TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: tcx:Tcr_0821 NADH-quinone oxidoreductase, E subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH-quinone oxidoreductase subunit E 784241..784744 Thioalkalimicrobium cyclicum ALM1 10719453 YP_004536893.1 CDS Thicy_0642 NC_015581.1 784748 786031 D TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: tcx:Tcr_0822 NADH-quinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 784748..786031 Thioalkalimicrobium cyclicum ALM1 10719454 YP_004536894.1 CDS Thicy_0643 NC_015581.1 786065 788179 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: tcx:Tcr_0823 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase; NADH-quinone oxidoreductase subunit G 786065..788179 Thioalkalimicrobium cyclicum ALM1 10719455 YP_004536895.1 CDS Thicy_0644 NC_015581.1 788195 789256 D HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: tcx:Tcr_0824 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; NAD(P)H-quinone oxidoreductase subunit 1 788195..789256 Thioalkalimicrobium cyclicum ALM1 10719456 YP_004536896.1 CDS Thicy_0645 NC_015581.1 789269 789760 D PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP: NADH-quinone oxidoreductase, chain I; KEGG: tcx:Tcr_0825 NADH dehydrogenase subunit I; NAD(P)H-quinone oxidoreductase subunit I 789269..789760 Thioalkalimicrobium cyclicum ALM1 10719457 YP_004536897.1 CDS Thicy_0646 NC_015581.1 789793 790434 D PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: tcx:Tcr_0826 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 789793..790434 Thioalkalimicrobium cyclicum ALM1 10719458 YP_004536898.1 CDS Thicy_0647 NC_015581.1 790437 790742 D KEGG: tcx:Tcr_0827 NADH-ubiquinone oxidoreductase, chain 4L; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; NAD(P)H-quinone oxidoreductase subunit 4L 790437..790742 Thioalkalimicrobium cyclicum ALM1 10719459 YP_004536899.1 CDS Thicy_0648 NC_015581.1 790746 792728 D TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: tcx:Tcr_0828 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; proton-translocating NADH-quinone oxidoreductase subunit L 790746..792728 Thioalkalimicrobium cyclicum ALM1 10719460 YP_004536900.1 CDS Thicy_0649 NC_015581.1 792759 794276 D TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: tcx:Tcr_0829 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M 792759..794276 Thioalkalimicrobium cyclicum ALM1 10719461 YP_004536901.1 CDS Thicy_0650 NC_015581.1 794306 795748 D PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: tcx:Tcr_0830 NADH dehydrogenase subunit N; NAD(P)H-quinone oxidoreductase subunit 2 794306..795748 Thioalkalimicrobium cyclicum ALM1 10719462 YP_004536902.1 CDS Thicy_0651 NC_015581.1 795829 796182 D KEGG: tcx:Tcr_0831 hypothetical protein; hypothetical protein 795829..796182 Thioalkalimicrobium cyclicum ALM1 10719463 YP_004536903.1 CDS Thicy_0652 NC_015581.1 796469 797824 D PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: tcx:Tcr_1677 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 796469..797824 Thioalkalimicrobium cyclicum ALM1 10719465 YP_004536904.1 CDS Thicy_0653 NC_015581.1 797857 798336 R KEGG: tcx:Tcr_1326 peptidylprolyl isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidyl-prolyl isomerase complement(797857..798336) Thioalkalimicrobium cyclicum ALM1 10719466 YP_004536905.1 CDS Thicy_0654 NC_015581.1 798416 798844 D PFAM: Uncharacterised protein family UPF0093; KEGG: tcx:Tcr_1325 hypothetical protein; hypothetical protein 798416..798844 Thioalkalimicrobium cyclicum ALM1 10719467 YP_004536906.1 CDS Thicy_0655 NC_015581.1 798942 800534 D KEGG: tcx:Tcr_1606 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter 798942..800534 Thioalkalimicrobium cyclicum ALM1 10719468 YP_004536907.1 CDS Thicy_0656 NC_015581.1 800566 801390 R PFAM: Ion transport; KEGG: jan:Jann_0087 ion transport protein; Ion transport protein complement(800566..801390) Thioalkalimicrobium cyclicum ALM1 10719469 YP_004536908.1 CDS Thicy_0657 NC_015581.1 801534 801971 D hypothetical protein 801534..801971 Thioalkalimicrobium cyclicum ALM1 10719470 YP_004536909.1 CDS Thicy_0658 NC_015581.1 802549 803862 D TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: tcx:Tcr_1176 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; trigger factor Tig 802549..803862 Thioalkalimicrobium cyclicum ALM1 10719473 YP_004536910.1 CDS Thicy_0659 NC_015581.1 804034 804639 D PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: tcx:Tcr_1177 ATP-dependent Clp protease proteolytic subunit; ATP-dependent Clp protease proteolytic subunit 804034..804639 Thioalkalimicrobium cyclicum ALM1 10719474 YP_004536911.1 CDS Thicy_0660 NC_015581.1 804657 805907 D SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: tcx:Tcr_1178 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; ATP-dependent Clp protease ATP-binding subunit clpX 804657..805907 Thioalkalimicrobium cyclicum ALM1 10719475 YP_004536912.1 CDS Thicy_0661 NC_015581.1 805922 808327 D SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: tcx:Tcr_1179 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; anti-sigma H sporulation factor LonB 805922..808327 Thioalkalimicrobium cyclicum ALM1 10719476 YP_004536913.1 CDS Thicy_0662 NC_015581.1 808901 810118 R KEGG: tcx:Tcr_1132 transcription factor jumonji, JmjC; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; Cupin 4 family protein complement(808901..810118) Thioalkalimicrobium cyclicum ALM1 10719481 YP_004536914.1 CDS Thicy_0663 NC_015581.1 810120 811541 R TIGRFAM: Adenylosuccinate lyase; KEGG: tcx:Tcr_1137 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; adenylosuccinate lyase complement(810120..811541) Thioalkalimicrobium cyclicum ALM1 10719482 YP_004536915.1 CDS Thicy_0664 NC_015581.1 811709 814282 D KEGG: tcx:Tcr_1142 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: Aconitase B, bacterial; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; aconitate hydratase 2 811709..814282 Thioalkalimicrobium cyclicum ALM1 10719483 YP_004536916.1 CDS Thicy_0665 NC_015581.1 814346 815134 R KEGG: tcx:Tcr_0902 hypothetical protein; hypothetical protein complement(814346..815134) Thioalkalimicrobium cyclicum ALM1 10719484 YP_004536917.1 CDS Thicy_0666 NC_015581.1 815198 815452 D KEGG: tcx:Tcr_0903 hypothetical protein; hypothetical protein 815198..815452 Thioalkalimicrobium cyclicum ALM1 10719485 YP_004536918.1 CDS Thicy_0667 NC_015581.1 815454 816350 R PFAM: ABC-3; KEGG: tcx:Tcr_2146 hypothetical protein; ABC transporter permease complement(815454..816350) Thioalkalimicrobium cyclicum ALM1 10719486 YP_004536919.1 CDS Thicy_0668 NC_015581.1 816343 817203 R PFAM: ABC-3; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transport systems permease components; ABC transporter permease complement(816343..817203) Thioalkalimicrobium cyclicum ALM1 10719487 YP_004536920.1 CDS Thicy_0669 NC_015581.1 817200 817961 R PFAM: ABC transporter-like; KEGG: tcx:Tcr_2148 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(817200..817961) Thioalkalimicrobium cyclicum ALM1 10719488 YP_004536921.1 CDS Thicy_0670 NC_015581.1 817958 818893 R PFAM: ABC transporter metal-binding lipoprotein; KEGG: tcx:Tcr_2149 periplasmic solute binding protein; heavy metal ABC transporter substrate-binding protein complement(817958..818893) Thioalkalimicrobium cyclicum ALM1 10719489 YP_004536922.1 CDS Thicy_0671 NC_015581.1 819021 819689 D KEGG: tcx:Tcr_0904 iron dependent repressor; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; DtxR family iron (metal) dependent repressor 819021..819689 Thioalkalimicrobium cyclicum ALM1 10719490 YP_004536923.1 CDS Thicy_0672 NC_015581.1 819686 820747 D KEGG: tcx:Tcr_0905 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; signal transduction histidine kinase, nitrogen specific, NtrB 819686..820747 Thioalkalimicrobium cyclicum ALM1 10719491 YP_004536924.1 CDS Thicy_0673 NC_015581.1 820744 822192 D TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: tcx:Tcr_0906 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; Fis family nitrogen metabolism transcriptional regulator NtrC 820744..822192 Thioalkalimicrobium cyclicum ALM1 10719492 YP_004536925.1 CDS Thicy_0674 NC_015581.1 822260 822598 R PFAM: Nitrogen regulatory protein PII; KEGG: tcx:Tcr_0912 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(822260..822598) Thioalkalimicrobium cyclicum ALM1 10719493 YP_004536926.1 CDS Thicy_0675 NC_015581.1 822600 823517 R TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: tcx:Tcr_0913 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase proenzyme complement(822600..823517) Thioalkalimicrobium cyclicum ALM1 10719494 YP_004536927.1 CDS Thicy_0676 NC_015581.1 823658 824875 D PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: tcx:Tcr_0914 argininosuccinate synthase; argininosuccinate synthase 823658..824875 Thioalkalimicrobium cyclicum ALM1 10719495 YP_004536928.1 CDS Thicy_0677 NC_015581.1 824890 825375 D manually curated; KEGG: tcx:Tcr_0915 phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase 824890..825375 Thioalkalimicrobium cyclicum ALM1 10719496 YP_004536929.1 CDS Thicy_0678 NC_015581.1 825383 825676 D KEGG: tcx:Tcr_0916 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 825383..825676 Thioalkalimicrobium cyclicum ALM1 10719497 YP_004536930.1 CDS Thicy_0679 NC_015581.1 825750 827006 D PFAM: Sodium:dicarboxylate symporter; KEGG: tcx:Tcr_0917 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 825750..827006 Thioalkalimicrobium cyclicum ALM1 10719498 YP_004536931.1 CDS Thicy_0680 NC_015581.1 827003 827746 R HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: tcx:Tcr_0919 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase complement(827003..827746) Thioalkalimicrobium cyclicum ALM1 10719499 YP_004536932.1 CDS Thicy_0681 NC_015581.1 827789 828295 R PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: tcx:Tcr_0920 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(827789..828295) Thioalkalimicrobium cyclicum ALM1 10719500 YP_004536933.1 CDS Thicy_0682 NC_015581.1 828374 828946 R KEGG: tcx:Tcr_0921 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; peptidyl-prolyl isomerase complement(828374..828946) Thioalkalimicrobium cyclicum ALM1 10719501 YP_004536934.1 CDS Thicy_0683 NC_015581.1 829099 830766 D PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: tcx:Tcr_0922 glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 829099..830766 Thioalkalimicrobium cyclicum ALM1 10719502 YP_004536935.1 CDS Thicy_0684 NC_015581.1 830791 832167 D TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: tcx:Tcr_0923 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; cysteinyl-tRNA synthetase 830791..832167 Thioalkalimicrobium cyclicum ALM1 10719503 YP_004536936.1 CDS Thicy_0685 NC_015581.1 832443 834437 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: tcx:Tcr_0924 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit complement(832443..834437) Thioalkalimicrobium cyclicum ALM1 10719504 YP_004536937.1 CDS Thicy_0686 NC_015581.1 834505 836310 R KEGG: tcx:Tcr_0925 lytic transglycosylase, catalytic; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase-like, catalytic; SMART: Peptidoglycan-binding Lysin subgroup; peptidoglycan-binding lysin domain-containing protein complement(834505..836310) Thioalkalimicrobium cyclicum ALM1 10719505 YP_004536938.1 CDS Thicy_0687 NC_015581.1 836395 837189 R TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; KEGG: pha:PSHAa1966 hydroxyacylglutathione hydrolase; Hydroxyacylglutathione hydrolase complement(836395..837189) Thioalkalimicrobium cyclicum ALM1 10719506 YP_004536939.1 CDS Thicy_0688 NC_015581.1 837307 838119 D KEGG: tcx:Tcr_0927 hypothetical protein; hypothetical protein 837307..838119 Thioalkalimicrobium cyclicum ALM1 10719507 YP_004536940.1 CDS Thicy_0689 NC_015581.1 838130 838573 D HAMAP: Ribonuclease H; KEGG: hha:Hhal_1585 ribonuclease H; PFAM: Ribonuclease H; Ribonuclease H 838130..838573 Thioalkalimicrobium cyclicum ALM1 10719508 YP_004536941.1 CDS Thicy_0690 NC_015581.1 838580 839497 D PFAM: Peptidase M23; KEGG: xca:xccb100_1920 metalloendopeptidase; peptidase M23 838580..839497 Thioalkalimicrobium cyclicum ALM1 10719509 YP_004536942.1 CDS Thicy_0691 NC_015581.1 839487 840215 R TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: tcx:Tcr_1371 competence lipoprotein ComL; outer membrane assembly lipoprotein YfiO complement(839487..840215) Thioalkalimicrobium cyclicum ALM1 10719510 YP_004536943.1 CDS Thicy_0692 NC_015581.1 840287 841360 D TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: tcx:Tcr_1370 pseudouridine synthase, RluD; SMART: RNA-binding S4; pseudouridine synthase Rlu family protein 840287..841360 Thioalkalimicrobium cyclicum ALM1 10719511 YP_004536944.1 CDS Thicy_0693 NC_015581.1 841387 842208 D KEGG: tgr:Tgr7_0816 protein of unknown function DUF152; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; multi-copper polyphenol oxidoreductase, laccase 841387..842208 Thioalkalimicrobium cyclicum ALM1 10719512 YP_004536945.1 CDS Thicy_0694 NC_015581.1 842217 843068 R TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: asa:ASA_0415 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(842217..843068) Thioalkalimicrobium cyclicum ALM1 10719513 YP_004536946.1 CDS Thicy_0695 NC_015581.1 843128 843733 D KEGG: psp:PSPPH_0843 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 843128..843733 Thioalkalimicrobium cyclicum ALM1 10719514 YP_004536947.1 CDS Thicy_0696 NC_015581.1 843915 844430 D KEGG: tcx:Tcr_1365 flavodoxin, long chain; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase; flavodoxin 843915..844430 Thioalkalimicrobium cyclicum ALM1 10719515 YP_004536948.1 CDS Thicy_0697 NC_015581.1 844440 845099 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: maq:Maqu_0813 HAD family hydrolase; HAD-superfamily hydrolase complement(844440..845099) Thioalkalimicrobium cyclicum ALM1 10719516 YP_004536949.1 CDS Thicy_0698 NC_015581.1 845242 845730 D KEGG: tcx:Tcr_1000 NUDIX hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; RNA pyrophosphohydrolase 845242..845730 Thioalkalimicrobium cyclicum ALM1 10719517 YP_004536950.1 CDS Thicy_0699 NC_015581.1 845947 848610 D KEGG: tcx:Tcr_1001 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type 845947..848610 Thioalkalimicrobium cyclicum ALM1 10719518 YP_004536951.1 CDS Thicy_0700 NC_015581.1 848638 849984 D KEGG: tcx:Tcr_1002 dehydrogenase catalytic domain-containing protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; dihydrolipoyllysine-residue acetyltransferase 848638..849984 Thioalkalimicrobium cyclicum ALM1 10719519 YP_004536952.1 CDS Thicy_0701 NC_015581.1 850000 851769 D TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: tcx:Tcr_1003 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoamide dehydrogenase 850000..851769 Thioalkalimicrobium cyclicum ALM1 10719520 YP_004536953.1 CDS Thicy_0702 NC_015581.1 851837 852514 D KEGG: sku:Sulku_1768 pseudouridine synthase rlu family protein, tigr01621; TIGRFAM: Pseudouridine synthase, RluA-like; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase Rlu family protein 851837..852514 Thioalkalimicrobium cyclicum ALM1 10719521 YP_004536954.1 CDS Thicy_0703 NC_015581.1 852514 852969 D PFAM: Uncharacterised protein family UPF0153; KEGG: tcx:Tcr_1327 hypothetical protein; hypothetical protein 852514..852969 Thioalkalimicrobium cyclicum ALM1 10719522 YP_004536955.1 CDS Thicy_0704 NC_015581.1 852959 853249 R KEGG: tcx:Tcr_1266 hypothetical protein; hypothetical protein complement(852959..853249) Thioalkalimicrobium cyclicum ALM1 10719523 YP_004536956.1 CDS Thicy_0705 NC_015581.1 853428 855164 D KEGG: tcx:Tcr_1265 hypothetical protein; TIGRFAM: YcaO-like; PFAM: YcaO-like; hypothetical protein 853428..855164 Thioalkalimicrobium cyclicum ALM1 10719524 YP_004536957.1 CDS Thicy_0706 NC_015581.1 855223 855972 R PFAM: Protein of unknown function DUF481; KEGG: tcx:Tcr_1585 hypothetical protein; hypothetical protein complement(855223..855972) Thioalkalimicrobium cyclicum ALM1 10719525 YP_004536958.1 CDS Thicy_0707 NC_015581.1 856092 857048 D PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: tcx:Tcr_1264 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 856092..857048 Thioalkalimicrobium cyclicum ALM1 10719526 YP_004536959.1 CDS Thicy_0708 NC_015581.1 857029 858291 D TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: cja:CJA_1016 MesJ protein; PFAM: PP-loop; tRNA(Ile)-lysidine synthase 857029..858291 Thioalkalimicrobium cyclicum ALM1 10719527 YP_004536960.1 CDS Thicy_0709 NC_015581.1 858416 860047 D PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: tcx:Tcr_1262 CTP synthetase; CTP synthase 858416..860047 Thioalkalimicrobium cyclicum ALM1 10719528 YP_004536961.1 CDS Thicy_0710 NC_015581.1 860050 860889 D PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: tcx:Tcr_1261 2-dehydro-3-deoxyphosphooctonate aldolase; 2-dehydro-3-deoxyphosphooctonate aldolase 860050..860889 Thioalkalimicrobium cyclicum ALM1 10719529 YP_004536962.1 CDS Thicy_0711 NC_015581.1 860949 862235 D PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: tcx:Tcr_1260 enolase; enolase 860949..862235 Thioalkalimicrobium cyclicum ALM1 10719530 YP_004536963.1 CDS Thicy_0712 NC_015581.1 862248 862616 D PFAM: Septum formation initiator; KEGG: tcx:Tcr_1259 septum formation initiator; septum formation initiator 862248..862616 Thioalkalimicrobium cyclicum ALM1 10719531 YP_004536964.1 CDS Thicy_0713 NC_015581.1 862613 863182 R KEGG: tcx:Tcr_1258 Smr protein/MutS2-like; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; Smr protein/MutS2 complement(862613..863182) Thioalkalimicrobium cyclicum ALM1 10719532 YP_004536965.1 CDS Thicy_0714 NC_015581.1 863239 863985 D PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: tcx:Tcr_1257 stationary-phase survival protein SurE; multifunctional protein surE 863239..863985 Thioalkalimicrobium cyclicum ALM1 10719533 YP_004536966.1 CDS Thicy_0715 NC_015581.1 863995 864708 D PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: tcx:Tcr_1256 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate O-methyltransferase 863995..864708 Thioalkalimicrobium cyclicum ALM1 10719534 YP_004536967.1 CDS Thicy_0716 NC_015581.1 864705 865283 D PFAM: SNARE associated Golgi protein; KEGG: tcx:Tcr_1255 hypothetical protein; hypothetical protein 864705..865283 Thioalkalimicrobium cyclicum ALM1 10719535 YP_004536968.1 CDS Thicy_0717 NC_015581.1 865306 865677 R PFAM: Protein of unknown function DUF498; KEGG: tcx:Tcr_1253 hypothetical protein; hypothetical protein complement(865306..865677) Thioalkalimicrobium cyclicum ALM1 10719536 YP_004536969.1 CDS Thicy_0718 NC_015581.1 865818 867014 D KEGG: tcx:Tcr_1252 aminotransferase; PFAM: Aminotransferase, class I/II; LL-diaminopimelate aminotransferase 865818..867014 Thioalkalimicrobium cyclicum ALM1 10719537 YP_004536970.1 CDS Thicy_0719 NC_015581.1 867016 868332 D KEGG: tcx:Tcr_1251 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; Homoserine dehydrogenase 867016..868332 Thioalkalimicrobium cyclicum ALM1 10719538 YP_004536971.1 CDS Thicy_0720 NC_015581.1 868336 869358 D PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; KEGG: tcx:Tcr_1250 hypothetical protein; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 868336..869358 Thioalkalimicrobium cyclicum ALM1 10719539 YP_004536972.1 CDS Thicy_0721 NC_015581.1 869369 870847 D KEGG: tcx:Tcr_1249 threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; threonine synthase 869369..870847 Thioalkalimicrobium cyclicum ALM1 10719540 YP_004536973.1 CDS Thicy_0722 NC_015581.1 870875 872680 R PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: tcx:Tcr_1248 phosphoesterase, RecJ-like; phosphoesterase RecJ domain-containing protein complement(870875..872680) Thioalkalimicrobium cyclicum ALM1 10719541 YP_004536974.1 CDS Thicy_0723 NC_015581.1 872729 874351 R KEGG: tcx:Tcr_1244 hypothetical protein; hypothetical protein complement(872729..874351) Thioalkalimicrobium cyclicum ALM1 10719542 YP_004536975.1 CDS Thicy_0724 NC_015581.1 874348 875247 R KEGG: ilo:IL2251 glutamyl-tRNA synthetase related protein; manually curated; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein complement(874348..875247) Thioalkalimicrobium cyclicum ALM1 10719543 YP_004536976.1 CDS Thicy_0725 NC_015581.1 875240 875668 R TIGRFAM: RNA polymerase-binding, DksA; KEGG: tcx:Tcr_1243 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator complement(875240..875668) Thioalkalimicrobium cyclicum ALM1 10719544 YP_004536977.1 CDS Thicy_0726 NC_015581.1 875897 876676 D PFAM: Haloacid dehalogenase-like hydrolase; KEGG: tcx:Tcr_1242 HAD family hydrolase; haloacid dehalogenase domain-containing protein hydrolase 875897..876676 Thioalkalimicrobium cyclicum ALM1 10719545 YP_004536978.1 CDS Thicy_0727 NC_015581.1 876713 878605 D PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: tcx:Tcr_1096 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 876713..878605 Thioalkalimicrobium cyclicum ALM1 10719546 YP_004536979.1 CDS Thicy_0728 NC_015581.1 878699 879049 R PFAM: HopJ type III effector protein; KEGG: tcx:Tcr_2012 hypothetical protein; HopJ type III effector protein complement(878699..879049) Thioalkalimicrobium cyclicum ALM1 10719547 YP_004536980.1 CDS Thicy_0729 NC_015581.1 879062 880360 R PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: tcx:Tcr_1241 carbohydrate kinase, FGGY; carbohydrate kinase FGGY complement(879062..880360) Thioalkalimicrobium cyclicum ALM1 10719548 YP_004536981.1 CDS Thicy_0730 NC_015581.1 880449 883961 D KEGG: avn:Avin_30320 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; chromosome segregation protein SMC 880449..883961 Thioalkalimicrobium cyclicum ALM1 10719549 YP_004536982.1 CDS Thicy_0731 NC_015581.1 883958 884935 D SMART: ZipA, C-terminal FtsZ-binding region; KEGG: tcx:Tcr_1240 cell division protein-like; ZipA FtsZ-binding region protein 883958..884935 Thioalkalimicrobium cyclicum ALM1 10719550 YP_004536983.1 CDS Thicy_0732 NC_015581.1 884952 887075 D SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: tcx:Tcr_1239 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; DNA ligase 884952..887075 Thioalkalimicrobium cyclicum ALM1 10719551 YP_004536984.1 CDS Thicy_0733 NC_015581.1 887059 887604 D PFAM: Uncharacterised protein family UPF0307; KEGG: tcx:Tcr_1238 hypothetical protein; hypothetical protein 887059..887604 Thioalkalimicrobium cyclicum ALM1 10719552 YP_004536985.1 CDS Thicy_0734 NC_015581.1 887605 887715 D hypothetical protein 887605..887715 Thioalkalimicrobium cyclicum ALM1 10719553 YP_004536986.1 CDS Thicy_0735 NC_015581.1 887712 888623 R PFAM: Protein of unknown function DUF6, transmembrane; KEGG: tcx:Tcr_1236 hypothetical protein; hypothetical protein complement(887712..888623) Thioalkalimicrobium cyclicum ALM1 10719554 YP_004536987.1 CDS Thicy_0736 NC_015581.1 888647 889153 R PFAM: Asparaginase/glutaminase; KEGG: tcx:Tcr_1235 asparaginase; asparaginase/glutaminase complement(888647..889153) Thioalkalimicrobium cyclicum ALM1 10719555 YP_004536988.1 CDS Thicy_0737 NC_015581.1 889202 889663 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: tcx:Tcr_1234 putative prophage repressor; peptidase S24/S26A/S26B, conserved region complement(889202..889663) Thioalkalimicrobium cyclicum ALM1 10719556 YP_004536989.1 CDS Thicy_0738 NC_015581.1 889660 889950 R PFAM: YCII-related; KEGG: hel:HELO_3713 K09780 hypothetical protein; hypothetical protein complement(889660..889950) Thioalkalimicrobium cyclicum ALM1 10719557 YP_004536990.1 CDS Thicy_0739 NC_015581.1 889980 890567 R TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: tcx:Tcr_1232 intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein complement(889980..890567) Thioalkalimicrobium cyclicum ALM1 10719558 YP_004536991.1 CDS Thicy_0740 NC_015581.1 890665 891513 D KEGG: tcx:Tcr_1231 PHP-like; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; PHP domain-containing protein 890665..891513 Thioalkalimicrobium cyclicum ALM1 10719559 YP_004536992.1 CDS Thicy_0741 NC_015581.1 891535 892158 D KEGG: tcx:Tcr_1230 SUA5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Sua5/YciO/YrdC/YwlC family protein 891535..892158 Thioalkalimicrobium cyclicum ALM1 10719560 YP_004536993.1 CDS Thicy_0742 NC_015581.1 892155 892817 D PFAM: Peptidase M50; KEGG: tcx:Tcr_1229 peptidase M50; peptidase M50 892155..892817 Thioalkalimicrobium cyclicum ALM1 10719561 YP_004536994.1 CDS Thicy_0743 NC_015581.1 892821 893666 D PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: xfa:XF2451 hypothetical protein; chromosome segregation and condensation protein ScpA 892821..893666 Thioalkalimicrobium cyclicum ALM1 10719562 YP_004536995.1 CDS Thicy_0744 NC_015581.1 893663 894265 D KEGG: rso:RSc1285 hypothetical protein; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 893663..894265 Thioalkalimicrobium cyclicum ALM1 10719563 YP_004536996.1 CDS Thicy_0745 NC_015581.1 894302 895159 D TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: tcx:Tcr_1228 pseudouridine synthase, Rsu; SMART: RNA-binding S4; pseudouridine synthase Rsu 894302..895159 Thioalkalimicrobium cyclicum ALM1 10719564 YP_004536997.1 CDS Thicy_0746 NC_015581.1 895166 896005 D KEGG: tcx:Tcr_1308 hypothetical protein; hypothetical protein 895166..896005 Thioalkalimicrobium cyclicum ALM1 10719565 YP_004536998.1 CDS Thicy_0747 NC_015581.1 895992 896918 D PFAM: UbiA prenyltransferase; KEGG: putative prenyltransferase; UbiA prenyltransferase 895992..896918 Thioalkalimicrobium cyclicum ALM1 10719566 YP_004536999.1 CDS Thicy_0748 NC_015581.1 896928 897824 D TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; KEGG: tcx:Tcr_1306 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; cysteine synthase B 896928..897824 Thioalkalimicrobium cyclicum ALM1 10719567 YP_004537000.1 CDS Thicy_0749 NC_015581.1 897849 898667 D PFAM: 3'-5' exonuclease, PolB-like; KEGG: abo:ABO_1625 hypothetical protein; 3'-5' exonuclease 897849..898667 Thioalkalimicrobium cyclicum ALM1 10719568 YP_004537001.1 CDS Thicy_0750 NC_015581.1 898652 899134 D PFAM: Adenylate cyclase; KEGG: tcx:Tcr_1305 adenylate cyclase; adenylate cyclase 898652..899134 Thioalkalimicrobium cyclicum ALM1 10719569 YP_004537002.1 CDS Thicy_0751 NC_015581.1 899136 900470 D KEGG: tcx:Tcr_1304 type I secretion outer membrane protein, TolC; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein; TolC family type I secretion outer membrane protein 899136..900470 Thioalkalimicrobium cyclicum ALM1 10719570 YP_004537003.1 CDS Thicy_0752 NC_015581.1 900482 902014 D PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: tcx:Tcr_1303 extracellular solute-binding protein; ABC transporter substrate-binding protein 900482..902014 Thioalkalimicrobium cyclicum ALM1 10719571 YP_004537004.1 CDS Thicy_0753 NC_015581.1 902572 904020 D TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: tcx:Tcr_1215 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 902572..904020 Thioalkalimicrobium cyclicum ALM1 10719576 YP_004537005.1 CDS Thicy_0754 NC_015581.1 904023 905522 D TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: tcx:Tcr_1214 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 904023..905522 Thioalkalimicrobium cyclicum ALM1 10719577 YP_004537006.1 CDS Thicy_0755 NC_015581.1 905506 906210 D TIGRFAM: 6-phosphogluconolactonase; KEGG: tcx:Tcr_1213 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 905506..906210 Thioalkalimicrobium cyclicum ALM1 10719578 YP_004537007.1 CDS Thicy_0756 NC_015581.1 906177 906719 R PFAM: Protein of unknown function DUF2062; KEGG: tcx:Tcr_0557 hypothetical protein; hypothetical protein complement(906177..906719) Thioalkalimicrobium cyclicum ALM1 10719579 YP_004537008.1 CDS Thicy_0757 NC_015581.1 906706 908889 R TIGRFAM: RelA/SpoT protein; KEGG: tcx:Tcr_1212 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT; (p)ppGpp synthetase I SpoT/RelA complement(906706..908889) Thioalkalimicrobium cyclicum ALM1 10719580 YP_004537009.1 CDS Thicy_0758 NC_015581.1 908932 909216 R PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: psm:PSM_A0521 peptidyl-prolyl cis-trans isomerase C (rotamase C); PpiC-type peptidyl-prolyl cis-trans isomerase complement(908932..909216) Thioalkalimicrobium cyclicum ALM1 10719581 YP_004537010.1 CDS Thicy_0759 NC_015581.1 909254 910252 R PFAM: Peptidase S49; KEGG: tcx:Tcr_1144 peptidase S49; peptidase S49 complement(909254..910252) Thioalkalimicrobium cyclicum ALM1 10719582 YP_004537011.1 CDS Thicy_0760 NC_015581.1 910322 912169 D SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: tcx:Tcr_1145 excinuclease ABC, C subunit; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif; UvrABC system protein C 910322..912169 Thioalkalimicrobium cyclicum ALM1 10719583 YP_004537012.1 CDS Thicy_0761 NC_015581.1 912166 912738 D PFAM: Protein of unknown function DUF1415; KEGG: sse:Ssed_1492 hypothetical protein; hypothetical protein 912166..912738 Thioalkalimicrobium cyclicum ALM1 10719584 YP_004537013.1 CDS Thicy_0762 NC_015581.1 912726 913655 D PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; KEGG: dfe:Dfer_3013 MOSC domain containing protein; MOSC domain-containing protein beta barrel domain-containing protein 912726..913655 Thioalkalimicrobium cyclicum ALM1 10719585 YP_004537014.1 CDS Thicy_0763 NC_015581.1 913740 914294 D TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: tcx:Tcr_1146 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 913740..914294 Thioalkalimicrobium cyclicum ALM1 10719586 YP_004537015.1 CDS Thicy_0764 NC_015581.1 914812 915921 D PFAM: Integrase, catalytic core, phage; KEGG: pin:Ping_0399 phage integrase family protein; integrase family protein 914812..915921 Thioalkalimicrobium cyclicum ALM1 10719590 YP_004537016.1 CDS Thicy_0765 NC_015581.1 915921 916436 D hypothetical protein 915921..916436 Thioalkalimicrobium cyclicum ALM1 10719591 YP_004537017.1 CDS Thicy_0766 NC_015581.1 916512 916715 D hypothetical protein 916512..916715 Thioalkalimicrobium cyclicum ALM1 10719592 YP_004537018.1 CDS Thicy_0767 NC_015581.1 916731 916904 D hypothetical protein 916731..916904 Thioalkalimicrobium cyclicum ALM1 10719593 YP_004537019.1 CDS Thicy_0768 NC_015581.1 916894 917079 D hypothetical protein 916894..917079 Thioalkalimicrobium cyclicum ALM1 10719594 YP_004537020.1 CDS Thicy_0769 NC_015581.1 917076 917381 D hypothetical protein 917076..917381 Thioalkalimicrobium cyclicum ALM1 10719595 YP_004537021.1 CDS Thicy_0770 NC_015581.1 917384 918229 D hypothetical protein 917384..918229 Thioalkalimicrobium cyclicum ALM1 10719596 YP_004537022.1 CDS Thicy_0771 NC_015581.1 918265 918468 D hypothetical protein 918265..918468 Thioalkalimicrobium cyclicum ALM1 10719597 YP_004537023.1 CDS Thicy_0772 NC_015581.1 918486 918863 D hypothetical protein 918486..918863 Thioalkalimicrobium cyclicum ALM1 10719598 YP_004537024.1 CDS Thicy_0773 NC_015581.1 919430 919792 D KEGG: aeh:Mlg_1064 hypothetical protein; hypothetical protein 919430..919792 Thioalkalimicrobium cyclicum ALM1 10719599 YP_004537025.1 CDS Thicy_0774 NC_015581.1 919794 921191 D KEGG: aeh:Mlg_1066 hypothetical protein; hypothetical protein 919794..921191 Thioalkalimicrobium cyclicum ALM1 10719600 YP_004537026.1 CDS Thicy_0775 NC_015581.1 921214 921720 D KEGG: pic:PICST_59451 Chromosome segregation and condensation; hypothetical protein 921214..921720 Thioalkalimicrobium cyclicum ALM1 10719601 YP_004537027.1 CDS Thicy_0776 NC_015581.1 922070 922474 D KEGG: aha:AHA_2459 SecC motif-containing protein; SecC motif-containing protein 922070..922474 Thioalkalimicrobium cyclicum ALM1 10719602 YP_004537028.1 CDS Thicy_0777 NC_015581.1 922572 923801 D PFAM: Nitrate/nitrite sensing protein NIT; ANTAR; KEGG: tkm:TK90_0664 ANTAR domain protein with unknown sensor; nitrate and nitrite sensing domain-containing protein 922572..923801 Thioalkalimicrobium cyclicum ALM1 10719603 YP_004537029.1 CDS Thicy_0778 NC_015581.1 924114 925508 D KEGG: amc:MADE_03654 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 924114..925508 Thioalkalimicrobium cyclicum ALM1 10719604 YP_004537030.1 CDS Thicy_0779 NC_015581.1 925556 926548 D PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcx:Tcr_1154 binding-protein dependent transport system inner membrane protein; ABC transporter permease 925556..926548 Thioalkalimicrobium cyclicum ALM1 10719605 YP_004537031.1 CDS Thicy_0780 NC_015581.1 926564 927352 D SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: hna:Hneap_1117 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter-like; nitrate ABC transporter ATPases C and D 926564..927352 Thioalkalimicrobium cyclicum ALM1 10719606 YP_004537032.1 CDS Thicy_0781 NC_015581.1 927610 928842 D KEGG: tcx:Tcr_1156 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite reductase (NAD(P)H) 927610..928842 Thioalkalimicrobium cyclicum ALM1 10719607 YP_004537033.1 CDS Thicy_0782 NC_015581.1 928839 931370 D TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: tcx:Tcr_1157 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region; nitrite reductase (NAD(P)H) large subunit 928839..931370 Thioalkalimicrobium cyclicum ALM1 10719608 YP_004537034.1 CDS Thicy_0783 NC_015581.1 931379 931714 D TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG: tcx:Tcr_1158 putative nitrate reductase (electron transfer subunit) and putative nitrite reductase (small subunit); nitrite reductase (NAD(P)H) small subunit 931379..931714 Thioalkalimicrobium cyclicum ALM1 10719609 YP_004537035.1 CDS Thicy_0784 NC_015581.1 931696 934389 D KEGG: tcx:Tcr_1159 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; nitrate reductase 931696..934389 Thioalkalimicrobium cyclicum ALM1 10719610 YP_004537036.1 CDS Thicy_0785 NC_015581.1 934391 935815 D TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; KEGG: psa:PST_2288 siroheme synthase; PFAM: Tetrapyrrole methylase; uroporphyrin-III C-methyltransferase 934391..935815 Thioalkalimicrobium cyclicum ALM1 10719611 YP_004537037.1 CDS Thicy_0786 NC_015581.1 935808 936785 D PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: tcx:Tcr_1161 hypothetical protein; glycosyl transferase, family 3 935808..936785 Thioalkalimicrobium cyclicum ALM1 10719612 YP_004537038.1 CDS Thicy_0787 NC_015581.1 936778 938079 D PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: tcx:Tcr_1162 molybdopterin binding domain-containing protein; MoeA domain-containing protein domain I and II 936778..938079 Thioalkalimicrobium cyclicum ALM1 10719613 YP_004537039.1 CDS Thicy_0788 NC_015581.1 938076 938717 D HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: aeh:Mlg_1304 molybdenum cofactor guanylyltransferase; molybdopterin-guanine dinucleotide biosynthesis protein A 938076..938717 Thioalkalimicrobium cyclicum ALM1 10719614 YP_004537040.1 CDS Thicy_0789 NC_015581.1 938686 939198 R PFAM: Flavodoxin/nitric oxide synthase; KEGG: avn:Avin_12440 sulfite reductase (NADPH) flavoprotein alpha-component/iron-regulated membrane protein; flavodoxin/nitric oxide synthase complement(938686..939198) Thioalkalimicrobium cyclicum ALM1 10719615 YP_004537041.1 CDS Thicy_0790 NC_015581.1 939198 940568 R PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: mmw:Mmwyl1_0897 beta-lactamase domain-containing protein; RNA-metabolising metallo-beta-lactamase complement(939198..940568) Thioalkalimicrobium cyclicum ALM1 10719616 YP_004537042.1 CDS Thicy_0791 NC_015581.1 940568 940858 R PFAM: BFD-like [2Fe-2S]-binding region; KEGG: tcx:Tcr_0857 BFD-like (2Fe-2S)-binding region; BFD (2Fe-2S)-binding domain-containing protein complement(940568..940858) Thioalkalimicrobium cyclicum ALM1 10719617 YP_004537043.1 CDS Thicy_0792 NC_015581.1 940948 942066 D KEGG: tcx:Tcr_1210 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase; yjbN family TIM-barrel protein 940948..942066 Thioalkalimicrobium cyclicum ALM1 10719618 YP_004537044.1 CDS Thicy_0793 NC_015581.1 942053 943636 D KEGG: tcx:Tcr_1209 exodeoxyribonuclease VII large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; exodeoxyribonuclease VII large subunit 942053..943636 Thioalkalimicrobium cyclicum ALM1 10719619 YP_004537045.1 CDS Thicy_0794 NC_015581.1 943650 943874 D PFAM: Exonuclease VII, small subunit; KEGG: tcx:Tcr_1208 hypothetical protein; Exonuclease VII small subunit 943650..943874 Thioalkalimicrobium cyclicum ALM1 10719620 YP_004537046.1 CDS Thicy_0795 NC_015581.1 943991 944440 R KEGG: tcx:Tcr_1206 hypothetical protein; hypothetical protein complement(943991..944440) Thioalkalimicrobium cyclicum ALM1 10719621 YP_004537047.1 CDS Thicy_0796 NC_015581.1 944594 946129 D KEGG: tcx:Tcr_1205 sigma-54 (RpoN); TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase sigma 54 subunit RpoN 944594..946129 Thioalkalimicrobium cyclicum ALM1 10719622 YP_004537048.1 CDS Thicy_0797 NC_015581.1 946162 947094 D KEGG: tcx:Tcr_1204 hypothetical protein; hypothetical protein 946162..947094 Thioalkalimicrobium cyclicum ALM1 10719623 YP_004537049.1 CDS Thicy_0798 NC_015581.1 947133 947816 D KEGG: tcx:Tcr_1203 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 947133..947816 Thioalkalimicrobium cyclicum ALM1 10719624 YP_004537050.1 CDS Thicy_0799 NC_015581.1 947804 949387 D KEGG: tcx:Tcr_1202 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 947804..949387 Thioalkalimicrobium cyclicum ALM1 10719625 YP_004537051.1 CDS Thicy_0800 NC_015581.1 949463 949681 D hypothetical protein 949463..949681 Thioalkalimicrobium cyclicum ALM1 10719626 YP_004537052.1 CDS Thicy_0801 NC_015581.1 949678 951030 R KEGG: tcx:Tcr_1356 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(949678..951030) Thioalkalimicrobium cyclicum ALM1 10719627 YP_004537053.1 CDS Thicy_0802 NC_015581.1 951033 951431 R KEGG: tcx:Tcr_1357 hypothetical protein; hypothetical protein complement(951033..951431) Thioalkalimicrobium cyclicum ALM1 10719628 YP_004537054.1 CDS Thicy_0803 NC_015581.1 951435 952028 R TIGRFAM: Nucleoside diphosphate pyrophosphatase; KEGG: tcx:Tcr_1358 nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain; nucleoside diphosphate pyrophosphatase complement(951435..952028) Thioalkalimicrobium cyclicum ALM1 10719629 YP_004537055.1 CDS Thicy_0804 NC_015581.1 952018 953097 R PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: tcx:Tcr_1359 alanine racemase; alanine racemase complement(952018..953097) Thioalkalimicrobium cyclicum ALM1 10719630 YP_004537056.1 CDS Thicy_0805 NC_015581.1 953109 954542 R TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: tcx:Tcr_1360 replicative DNA helicase; SMART: ATPase, AAA+ type, core; replicative DNA helicase complement(953109..954542) Thioalkalimicrobium cyclicum ALM1 10719631 YP_004537057.1 CDS Thicy_0806 NC_015581.1 954640 955086 R TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: tcx:Tcr_1361 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; 50S ribosomal protein L9 complement(954640..955086) Thioalkalimicrobium cyclicum ALM1 10719632 YP_004537058.1 CDS Thicy_0807 NC_015581.1 955098 955994 R PFAM: Protein of unknown function DUF2232, membrane; KEGG: tcx:Tcr_1362 hypothetical protein; hypothetical protein complement(955098..955994) Thioalkalimicrobium cyclicum ALM1 10719633 YP_004537059.1 CDS Thicy_0808 NC_015581.1 956009 956236 R TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: tcx:Tcr_1363 ribosomal protein S18; PFAM: Ribosomal protein S18; 30S ribosomal protein S18 complement(956009..956236) Thioalkalimicrobium cyclicum ALM1 10719634 YP_004537060.1 CDS Thicy_0809 NC_015581.1 956255 956602 R TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: tcx:Tcr_1364 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 complement(956255..956602) Thioalkalimicrobium cyclicum ALM1 10719635 YP_004537061.1 CDS Thicy_0810 NC_015581.1 956749 957468 R TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: tcx:Tcr_1201 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; orotidine 5'-phosphate decarboxylase complement(956749..957468) Thioalkalimicrobium cyclicum ALM1 10719636 YP_004537062.1 CDS Thicy_0811 NC_015581.1 957515 957874 R PFAM: Protein of unknown function DUF1049; KEGG: tcx:Tcr_1200 hypothetical protein; hypothetical protein complement(957515..957874) Thioalkalimicrobium cyclicum ALM1 10719637 YP_004537063.1 CDS Thicy_0812 NC_015581.1 957888 958193 R TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: tcx:Tcr_1199 integration host factor, beta subunit; SMART: Histone-like bacterial DNA-binding protein; integration host factor subunit beta complement(957888..958193) Thioalkalimicrobium cyclicum ALM1 10719638 YP_004537064.1 CDS Thicy_0813 NC_015581.1 958293 959951 R KEGG: tcx:Tcr_1198 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain; 30S ribosomal protein S1 complement(958293..959951) Thioalkalimicrobium cyclicum ALM1 10719639 YP_004537065.1 CDS Thicy_0814 NC_015581.1 960061 960720 R PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: tcx:Tcr_1197 cytidylate kinase; cytidylate kinase complement(960061..960720) Thioalkalimicrobium cyclicum ALM1 10719640 YP_004537066.1 CDS Thicy_0815 NC_015581.1 960720 962054 R PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: tcx:Tcr_1196 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(960720..962054) Thioalkalimicrobium cyclicum ALM1 10719641 YP_004537067.1 CDS Thicy_0816 NC_015581.1 962092 962967 R KEGG: tcx:Tcr_1195 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase complement(962092..962967) Thioalkalimicrobium cyclicum ALM1 10719642 YP_004537068.1 CDS Thicy_0817 NC_015581.1 962968 964059 R PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: tcx:Tcr_1194 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(962968..964059) Thioalkalimicrobium cyclicum ALM1 10719643 YP_004537069.1 CDS Thicy_0818 NC_015581.1 964078 965172 R KEGG: tcx:Tcr_1193 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; chorismate mutase complement(964078..965172) Thioalkalimicrobium cyclicum ALM1 10719644 YP_004537070.1 CDS Thicy_0819 NC_015581.1 965183 966256 R PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: tcx:Tcr_1192 phosphoserine aminotransferase; phosphoserine aminotransferase complement(965183..966256) Thioalkalimicrobium cyclicum ALM1 10719645 YP_004537071.1 CDS Thicy_0820 NC_015581.1 966259 968895 R SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: tcx:Tcr_1191 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; DNA gyrase subunit A complement(966259..968895) Thioalkalimicrobium cyclicum ALM1 10719646 YP_004537072.1 CDS Thicy_0821 NC_015581.1 969043 969762 D PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: tcx:Tcr_1190 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 969043..969762 Thioalkalimicrobium cyclicum ALM1 10719647 YP_004537073.1 CDS Thicy_0822 NC_015581.1 969772 970440 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: tcx:Tcr_1189 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase 969772..970440 Thioalkalimicrobium cyclicum ALM1 10719648 YP_004537074.1 CDS Thicy_0823 NC_015581.1 970440 971171 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_1188 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 970440..971171 Thioalkalimicrobium cyclicum ALM1 10719649 YP_004537075.1 CDS Thicy_0824 NC_015581.1 971210 971524 R KEGG: vfm:VFMJ11_A0651 CcdB; CcdB-like toxin protein complement(971210..971524) Thioalkalimicrobium cyclicum ALM1 10719650 YP_004537076.1 CDS Thicy_0825 NC_015581.1 971524 971769 R PFAM: Post-segregation antitoxin CcdA; KEGG: cja:CJA_3183 CcdB antidote CcdA; Post-segregation antitoxin CcdA complement(971524..971769) Thioalkalimicrobium cyclicum ALM1 10719651 YP_004537077.1 CDS Thicy_0826 NC_015581.1 971844 974165 R KEGG: bpy:Bphyt_2527 RNA binding S1 domain protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; Tex-like protein complement(971844..974165) Thioalkalimicrobium cyclicum ALM1 10719652 YP_004537078.1 CDS Thicy_0827 NC_015581.1 974253 975773 R PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: tcx:Tcr_0726 lysyl-tRNA synthetase; Lysyl-tRNA synthetase complement(974253..975773) Thioalkalimicrobium cyclicum ALM1 10719653 YP_004537079.1 CDS Thicy_0828 NC_015581.1 975912 977007 R hypothetical protein complement(join(975912..976934,976936..977007)) Thioalkalimicrobium cyclicum ALM1 10719654 YP_004537080.1 CDS Thicy_0829 NC_015581.1 977267 977782 D KEGG: tcx:Tcr_0724 hypothetical protein; hypothetical protein 977267..977782 Thioalkalimicrobium cyclicum ALM1 10719655 YP_004537081.1 CDS Thicy_0830 NC_015581.1 977810 978355 R hypothetical protein complement(977810..978355) Thioalkalimicrobium cyclicum ALM1 10719656 YP_004537082.1 CDS Thicy_0831 NC_015581.1 978460 979338 R PFAM: UspA; KEGG: hch:HCH_02511 universal stress protein UspA-like nucleotide-binding protein; UspA domain-containing protein complement(978460..979338) Thioalkalimicrobium cyclicum ALM1 10719657 YP_004537083.1 CDS Thicy_0832 NC_015581.1 979338 980831 R PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: abu:Abu_1286 sulfate permease; sulfate transporter complement(979338..980831) Thioalkalimicrobium cyclicum ALM1 10719658 YP_004537084.1 CDS Thicy_0833 NC_015581.1 981025 982947 R PFAM: 5'-Nucleotidase, C-terminal; KEGG: tcx:Tcr_1549 sulfate thiol esterase; 5'-nucleotidase domain-containing protein complement(981025..982947) Thioalkalimicrobium cyclicum ALM1 10719659 YP_004537085.1 CDS Thicy_0834 NC_015581.1 983104 986976 R PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: tcx:Tcr_1550 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase complement(983104..986976) Thioalkalimicrobium cyclicum ALM1 10719660 YP_004537086.1 CDS Thicy_0835 NC_015581.1 987033 988085 R KEGG: tcx:Tcr_1551 hypothetical protein; hypothetical protein complement(987033..988085) Thioalkalimicrobium cyclicum ALM1 10719661 YP_004537087.1 CDS Thicy_0836 NC_015581.1 988082 988963 R PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: tcx:Tcr_1552 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(988082..988963) Thioalkalimicrobium cyclicum ALM1 10719662 YP_004537088.1 CDS Thicy_0837 NC_015581.1 989174 989650 D PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_1553 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 989174..989650 Thioalkalimicrobium cyclicum ALM1 10719663 YP_004537089.1 CDS Thicy_0838 NC_015581.1 989666 991081 D KEGG: tcx:Tcr_1554 PhoH-like protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; PhoH family protein 989666..991081 Thioalkalimicrobium cyclicum ALM1 10719664 YP_004537090.1 CDS Thicy_0839 NC_015581.1 991117 991719 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: tcx:Tcr_0858 putative prophage repressor; peptidase S24/S26A/S26B, conserved region complement(991117..991719) Thioalkalimicrobium cyclicum ALM1 10719665 YP_004537091.1 CDS Thicy_0840 NC_015581.1 991712 993184 R SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: mei:Msip34_2797 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; DNA polymerase III subunit epsilon complement(991712..993184) Thioalkalimicrobium cyclicum ALM1 10719666 YP_004537092.1 CDS Thicy_0841 NC_015581.1 993185 994528 R KEGG: tcx:Tcr_0859 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; DNA-directed DNA polymerase complement(993185..994528) Thioalkalimicrobium cyclicum ALM1 10719667 YP_004537093.1 CDS Thicy_0842 NC_015581.1 994722 995867 D PFAM: Uncharacterised conserved protein UCP015557; KEGG: ppg:PputGB1_1432 hypothetical protein; hypothetical protein 994722..995867 Thioalkalimicrobium cyclicum ALM1 10719668 YP_004537094.1 CDS Thicy_0843 NC_015581.1 995907 996467 D TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: hna:Hneap_0565 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like; elongation factor P 995907..996467 Thioalkalimicrobium cyclicum ALM1 10719669 YP_004537095.1 CDS Thicy_0844 NC_015581.1 996578 997729 R PFAM: Protein of unknown function DUF482; KEGG: tcx:Tcr_1140 hypothetical protein; hypothetical protein complement(996578..997729) Thioalkalimicrobium cyclicum ALM1 10719670 YP_004537096.1 CDS Thicy_0845 NC_015581.1 997823 998032 R KEGG: tcx:Tcr_1006 hypothetical protein; hypothetical protein complement(997823..998032) Thioalkalimicrobium cyclicum ALM1 10719671 YP_004537097.1 CDS Thicy_0846 NC_015581.1 998060 998332 R PFAM: Plasmid stabilisation system; KEGG: sku:Sulku_0257 plasmid stabilization system; plasmid stabilization system complement(998060..998332) Thioalkalimicrobium cyclicum ALM1 10719672 YP_004537098.1 CDS Thicy_0847 NC_015581.1 998329 998625 R PFAM: CopG-like DNA-binding; CopG-like DNA-binding domain-containing protein complement(998329..998625) Thioalkalimicrobium cyclicum ALM1 10719673 YP_004537099.1 CDS Thicy_0848 NC_015581.1 998775 998951 R manually curated; KEGG: scl:sce0138 hypothetical protein; hypothetical protein complement(998775..998951) Thioalkalimicrobium cyclicum ALM1 10719674 YP_004537100.1 CDS Thicy_0849 NC_015581.1 999341 1001644 R PFAM: DNA methylase N-4/N-6; KEGG: cyt:cce_1765 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein complement(999341..1001644) Thioalkalimicrobium cyclicum ALM1 10719675 YP_004537101.1 CDS Thicy_0850 NC_015581.1 1001733 1001987 D KEGG: ctt:CtCNB1_1890 putative regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1001733..1001987 Thioalkalimicrobium cyclicum ALM1 10719676 YP_004537102.1 CDS Thicy_0851 NC_015581.1 1001980 1003131 D hypothetical protein 1001980..1003131 Thioalkalimicrobium cyclicum ALM1 10719677 YP_004537103.1 CDS Thicy_0852 NC_015581.1 1003182 1004792 R PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: tcx:Tcr_1185 ABC transporter related; SMART: ATPase, AAA+ type, core; Nickel-transporting ATPase complement(1003182..1004792) Thioalkalimicrobium cyclicum ALM1 10719678 YP_004537104.1 CDS Thicy_0853 NC_015581.1 1004804 1005409 R hypothetical protein complement(1004804..1005409) Thioalkalimicrobium cyclicum ALM1 10719679 YP_004537105.1 CDS Thicy_0854 NC_015581.1 1005424 1006833 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0195 oligopeptide ABC transporter, permease; ABC transporter permease complement(1005424..1006833) Thioalkalimicrobium cyclicum ALM1 10719680 YP_004537106.1 CDS Thicy_0855 NC_015581.1 1006830 1007807 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0194 oligopeptide ABC transporter, permease; ABC transporter permease complement(1006830..1007807) Thioalkalimicrobium cyclicum ALM1 10719681 YP_004537107.1 CDS Thicy_0856 NC_015581.1 1007804 1010020 R PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sun:SUN_0193 oligopeptide ABC transporter, substrate-binding protein; ABC transporter substrate-binding protein complement(1007804..1010020) Thioalkalimicrobium cyclicum ALM1 10719682 YP_004537108.1 CDS Thicy_0857 NC_015581.1 1010098 1010877 D KEGG: tcx:Tcr_1181 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; enoyl-ACP reductase (NADH) 1010098..1010877 Thioalkalimicrobium cyclicum ALM1 10719683 YP_004537109.1 CDS Thicy_0858 NC_015581.1 1010960 1013869 R PFAM: Peptidase M16C associated; Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: tcx:Tcr_1130 peptidase M16-like; peptidase M16C associated domain-containing protein complement(1010960..1013869) Thioalkalimicrobium cyclicum ALM1 10719684 YP_004537110.1 CDS Thicy_0859 NC_015581.1 1014055 1016139 R PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: tcx:Tcr_1129 polynucleotide phosphorylase/polyadenylase; Polyribonucleotide nucleotidyltransferase complement(1014055..1016139) Thioalkalimicrobium cyclicum ALM1 10719685 YP_004537111.1 CDS Thicy_0860 NC_015581.1 1016282 1016548 R KEGG: tcx:Tcr_1128 ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; 30S ribosomal protein S15 complement(1016282..1016548) Thioalkalimicrobium cyclicum ALM1 10719686 YP_004537112.1 CDS Thicy_0861 NC_015581.1 1016669 1017160 R KEGG: tcx:Tcr_1127 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(1016669..1017160) Thioalkalimicrobium cyclicum ALM1 10719687 YP_004537113.1 CDS Thicy_0862 NC_015581.1 1017138 1018076 R PFAM: Methyltransferase type 11; KEGG: tcx:Tcr_1126 hypothetical protein; type 11 methyltransferase complement(1017138..1018076) Thioalkalimicrobium cyclicum ALM1 10719688 YP_004537114.1 CDS Thicy_0863 NC_015581.1 1018039 1018995 R TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: tcx:Tcr_1125 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; tRNA pseudouridine synthase B complement(1018039..1018995) Thioalkalimicrobium cyclicum ALM1 10719689 YP_004537115.1 CDS Thicy_0864 NC_015581.1 1018999 1019355 R TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: tcx:Tcr_1124 ribosome-binding factor A; PFAM: Ribosome-binding factor A; Ribosome-binding factor A complement(1018999..1019355) Thioalkalimicrobium cyclicum ALM1 10719690 YP_004537116.1 CDS Thicy_0865 NC_015581.1 1019355 1021865 R KEGG: tcx:Tcr_1123 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Initiation factor 2 associated region, bacterial; Translation elongation factor EFTu/EF1A, domain 2; translation initiation factor IF-2 complement(1019355..1021865) Thioalkalimicrobium cyclicum ALM1 10719691 YP_004537117.1 CDS Thicy_0866 NC_015581.1 1021885 1023372 R KEGG: tcx:Tcr_1122 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; NusA antitermination factor complement(1021885..1023372) Thioalkalimicrobium cyclicum ALM1 10719692 YP_004537118.1 CDS Thicy_0867 NC_015581.1 1023385 1023840 R KEGG: tcx:Tcr_1121 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090; Ribosome maturation factor rimP complement(1023385..1023840) Thioalkalimicrobium cyclicum ALM1 10719693 YP_004537119.1 CDS Thicy_0868 NC_015581.1 1024041 1024673 R KEGG: tcx:Tcr_1120 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III complement(1024041..1024673) Thioalkalimicrobium cyclicum ALM1 10719694 YP_004537120.1 CDS Thicy_0869 NC_015581.1 1024673 1026505 R PFAM: Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; KEGG: tcx:Tcr_1119 signal-transduction protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase complement(1024673..1026505) Thioalkalimicrobium cyclicum ALM1 10719695 YP_004537121.1 CDS Thicy_0870 NC_015581.1 1026598 1028214 R KEGG: dau:Daud_0272 SSS family solute/sodium (Na+) symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter; SSS sodium solute transporter superfamily protein complement(1026598..1028214) Thioalkalimicrobium cyclicum ALM1 10719696 YP_004537122.1 CDS Thicy_0871 NC_015581.1 1028216 1028443 R KEGG: dau:Daud_0271 UspA domain-containing protein; UspA domain-containing protein complement(1028216..1028443) Thioalkalimicrobium cyclicum ALM1 10719697 YP_004537123.1 CDS Thicy_0872 NC_015581.1 1028677 1030632 R PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: tcx:Tcr_1116 acetyl-CoA synthetase; acetyl-coenzyme A synthetase complement(1028677..1030632) Thioalkalimicrobium cyclicum ALM1 10719698 YP_004537124.1 CDS Thicy_0873 NC_015581.1 1030737 1034240 R SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: tcx:Tcr_1115 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha complement(1030737..1034240) Thioalkalimicrobium cyclicum ALM1 10719699 YP_004537125.1 CDS Thicy_0874 NC_015581.1 1034333 1035121 D PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: tcx:Tcr_1114 leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 1034333..1035121 Thioalkalimicrobium cyclicum ALM1 10719700 YP_004537126.1 CDS Thicy_0875 NC_015581.1 1035114 1035521 D KEGG: cbs:COXBURSA331_A1563 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 1035114..1035521 Thioalkalimicrobium cyclicum ALM1 10719701 YP_004537127.1 CDS Thicy_0876 NC_015581.1 1035518 1035850 D KEGG: tcx:Tcr_2030 hypothetical protein; hypothetical protein 1035518..1035850 Thioalkalimicrobium cyclicum ALM1 10719702 YP_004537128.1 CDS Thicy_0877 NC_015581.1 1035860 1037695 D TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: tcx:Tcr_2029 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; succinate dehydrogenase, flavoprotein subunit 1035860..1037695 Thioalkalimicrobium cyclicum ALM1 10719703 YP_004537129.1 CDS Thicy_0878 NC_015581.1 1037726 1038460 D TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: tcx:Tcr_2028 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: Ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1037726..1038460 Thioalkalimicrobium cyclicum ALM1 10719704 YP_004537130.1 CDS Thicy_0879 NC_015581.1 1038460 1038726 D KEGG: tcx:Tcr_2027 TPR repeat-containing protein; hypothetical protein 1038460..1038726 Thioalkalimicrobium cyclicum ALM1 10719705 YP_004537131.1 CDS Thicy_0880 NC_015581.1 1038793 1039011 D TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: tcx:Tcr_1113 translation initiation factor IF-1; PFAM: S1, IF1 type; translation initiation factor IF-1 1038793..1039011 Thioalkalimicrobium cyclicum ALM1 10719706 YP_004537132.1 CDS Thicy_0881 NC_015581.1 1039047 1039457 R TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: tcx:Tcr_0738 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase complement(1039047..1039457) Thioalkalimicrobium cyclicum ALM1 10719707 YP_004537133.1 CDS Thicy_0882 NC_015581.1 1039454 1040215 R PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: tcx:Tcr_0737 pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase complement(1039454..1040215) Thioalkalimicrobium cyclicum ALM1 10719708 YP_004537134.1 CDS Thicy_0883 NC_015581.1 1040212 1041024 R KEGG: tcx:Tcr_0736 DNA repair protein RecO; HAMAP: DNA repair protein recO; PFAM: Recombination protein O, RecO; DNA repair protein recO complement(1040212..1041024) Thioalkalimicrobium cyclicum ALM1 10719709 YP_004537135.1 CDS Thicy_0884 NC_015581.1 1041021 1041932 R TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: tcx:Tcr_0735 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; GTP-binding protein Era-like-protein complement(1041021..1041932) Thioalkalimicrobium cyclicum ALM1 10719710 YP_004537136.1 CDS Thicy_0885 NC_015581.1 1041929 1042624 R KEGG: tcx:Tcr_0734 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding; ribonuclease 3 complement(1041929..1042624) Thioalkalimicrobium cyclicum ALM1 10719711 YP_004537137.1 CDS Thicy_0886 NC_015581.1 1042624 1043394 R TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: tcx:Tcr_0733 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(1042624..1043394) Thioalkalimicrobium cyclicum ALM1 10719712 YP_004537138.1 CDS Thicy_0887 NC_015581.1 1043394 1045205 R TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: tcx:Tcr_0732 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; GTP-binding protein lepA complement(1043394..1045205) Thioalkalimicrobium cyclicum ALM1 10719713 YP_004537139.1 CDS Thicy_0888 NC_015581.1 1045348 1046778 R SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: tcx:Tcr_0731 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; protease Do complement(1045348..1046778) Thioalkalimicrobium cyclicum ALM1 10719714 YP_004537140.1 CDS Thicy_0889 NC_015581.1 1046762 1047232 R PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: tcx:Tcr_0730 positive regulator of sigma(E), RseC/MucC; sigma E positive regulator RseC/MucC complement(1046762..1047232) Thioalkalimicrobium cyclicum ALM1 10719715 YP_004537141.1 CDS Thicy_0890 NC_015581.1 1047333 1048898 D TIGRFAM: L-aspartate oxidase; KEGG: tcx:Tcr_0729 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; L-aspartate oxidase 1047333..1048898 Thioalkalimicrobium cyclicum ALM1 10719716 YP_004537142.1 CDS Thicy_0891 NC_015581.1 1049219 1049434 R hypothetical protein complement(1049219..1049434) Thioalkalimicrobium cyclicum ALM1 10719717 YP_004537143.1 CDS Thicy_0892 NC_015581.1 1049421 1049660 R hypothetical protein complement(1049421..1049660) Thioalkalimicrobium cyclicum ALM1 10719718 YP_004537144.1 CDS Thicy_0893 NC_015581.1 1049776 1049868 R hypothetical protein complement(1049776..1049868) Thioalkalimicrobium cyclicum ALM1 10719719 YP_004537145.1 CDS Thicy_0894 NC_015581.1 1049861 1050124 R KEGG: aeh:Mlg_1786 addiction module antitoxin; TIGRFAM: Addiction module toxin, Txe/YoeB; Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system; Txe/YoeB family addiction module toxin complement(1049861..1050124) Thioalkalimicrobium cyclicum ALM1 10719720 YP_004537146.1 CDS Thicy_0895 NC_015581.1 1050129 1050371 R TIGRFAM: Prevent-host-death protein; KEGG: dal:Dalk_1773 prevent-host-death family protein; prevent-host-death family protein complement(1050129..1050371) Thioalkalimicrobium cyclicum ALM1 10719721 YP_004537147.1 CDS Thicy_0896 NC_015581.1 1050600 1050746 R hypothetical protein complement(1050600..1050746) Thioalkalimicrobium cyclicum ALM1 10719722 YP_004537148.1 CDS Thicy_0897 NC_015581.1 1050727 1050945 R KEGG: ava:Ava_0765 hypothetical protein; hypothetical protein complement(1050727..1050945) Thioalkalimicrobium cyclicum ALM1 10719723 YP_004537149.1 CDS Thicy_0898 NC_015581.1 1050929 1051207 R PFAM: Protein of unknown function DUF497; KEGG: ppr:PBPRB0296 hypothetical protein; hypothetical protein complement(1050929..1051207) Thioalkalimicrobium cyclicum ALM1 10719724 YP_004537150.1 CDS Thicy_0899 NC_015581.1 1051604 1051987 R PFAM: PilT protein, N-terminal; KEGG: cch:Cag_1389 nucleic acid binding protein; PilT protein domain-containing protein complement(1051604..1051987) Thioalkalimicrobium cyclicum ALM1 10719725 YP_004537151.1 CDS Thicy_0900 NC_015581.1 1051991 1052221 R hypothetical protein complement(1051991..1052221) Thioalkalimicrobium cyclicum ALM1 10719726 YP_004537152.1 CDS Thicy_0901 NC_015581.1 1052392 1052676 R KEGG: nla:NLA_6641 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C complement(1052392..1052676) Thioalkalimicrobium cyclicum ALM1 10719727 YP_004537153.1 CDS Thicy_0902 NC_015581.1 1053134 1053508 R PFAM: PilT protein, N-terminal; KEGG: afl:Aflv_2624 PIN domain-containing protein; PilT protein domain-containing protein complement(1053134..1053508) Thioalkalimicrobium cyclicum ALM1 10719728 YP_004537154.1 CDS Thicy_0903 NC_015581.1 1053505 1053735 R hypothetical protein complement(1053505..1053735) Thioalkalimicrobium cyclicum ALM1 10719729 YP_004537155.1 CDS Thicy_0904 NC_015581.1 1053845 1054243 R PFAM: PilT protein, N-terminal; KEGG: ppw:PputW619_4624 PilT domain-containing protein; PilT protein domain-containing protein complement(1053845..1054243) Thioalkalimicrobium cyclicum ALM1 10719730 YP_004537156.1 CDS Thicy_0905 NC_015581.1 1054240 1054476 R KEGG: pst:PSPTO_1046 virulence-associated protein, putative; virulence-associated protein complement(1054240..1054476) Thioalkalimicrobium cyclicum ALM1 10719731 YP_004537157.1 CDS Thicy_0906 NC_015581.1 1054738 1055829 R TIGRFAM: UDP-glucose 4-epimerase; KEGG: tbd:Tbd_1774 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase complement(1054738..1055829) Thioalkalimicrobium cyclicum ALM1 10719732 YP_004537158.1 CDS Thicy_0907 NC_015581.1 1055968 1057308 R KEGG: nam:NAMH_1655 sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(1055968..1057308) Thioalkalimicrobium cyclicum ALM1 10719733 YP_004537159.1 CDS Thicy_0908 NC_015581.1 1057395 1057865 R TIGRFAM: Glycerol-3-phosphate cytidylyltransferase; Cytidyltransferase-related; KEGG: msu:MS0658 TagD protein; PFAM: Cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase complement(1057395..1057865) Thioalkalimicrobium cyclicum ALM1 10719734 YP_004537160.1 CDS Thicy_0909 NC_015581.1 1057935 1058933 R TIGRFAM: UDP-glucose 4-epimerase; KEGG: hel:HELO_2398 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase complement(1057935..1058933) Thioalkalimicrobium cyclicum ALM1 10719735 YP_004537161.1 CDS Thicy_0911 NC_015581.1 1059275 1059661 R PFAM: PilT protein, N-terminal; KEGG: cch:Cag_1389 nucleic acid binding protein; PilT protein domain-containing protein complement(1059275..1059661) Thioalkalimicrobium cyclicum ALM1 10719737 YP_004537162.1 CDS Thicy_0912 NC_015581.1 1059665 1059895 R hypothetical protein complement(1059665..1059895) Thioalkalimicrobium cyclicum ALM1 10719738 YP_004537163.1 CDS Thicy_0914 NC_015581.1 1060483 1060707 R hypothetical protein complement(1060483..1060707) Thioalkalimicrobium cyclicum ALM1 10719740 YP_004537164.1 CDS Thicy_0917 NC_015581.1 1061480 1061716 R hypothetical protein complement(1061480..1061716) Thioalkalimicrobium cyclicum ALM1 10719743 YP_004537165.1 CDS Thicy_0919 NC_015581.1 1061962 1062600 R KEGG: ppu:PP_1789 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(1061962..1062600) Thioalkalimicrobium cyclicum ALM1 10719745 YP_004537166.1 CDS Thicy_0920 NC_015581.1 1062590 1063660 R PFAM: Aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(1062590..1063660) Thioalkalimicrobium cyclicum ALM1 10719746 YP_004537167.1 CDS Thicy_0921 NC_015581.1 1063727 1064380 R PFAM: Acylneuraminate cytidylyltransferase; KEGG: cjd:JJD26997_0722 putative acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(1063727..1064380) Thioalkalimicrobium cyclicum ALM1 10719747 YP_004537168.1 CDS Thicy_0922 NC_015581.1 1064383 1065147 R PFAM: HpcH/HpaI aldolase; KEGG: amt:Amet_0505 2-dehydro-3-deoxyglucarate aldolase; HpcH/HpaI aldolase complement(1064383..1065147) Thioalkalimicrobium cyclicum ALM1 10719748 YP_004537169.1 CDS Thicy_0923 NC_015581.1 1065144 1066760 R PFAM: Pyruvate carboxyltransferase; KEGG: ppu:PP_1791 aldolase/synthase, putative; pyruvate carboxyltransferase complement(1065144..1066760) Thioalkalimicrobium cyclicum ALM1 10719749 YP_004537170.1 CDS Thicy_0924 NC_015581.1 1066757 1069420 R PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: pla:Plav_0208 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(1066757..1069420) Thioalkalimicrobium cyclicum ALM1 10719750 YP_004537171.1 CDS Thicy_0925 NC_015581.1 1069410 1073177 R KEGG: ecc:c3694 hypothetical protein; PFAM: CDP-glycerol glycerophosphotransferase; Tetratricopeptide TPR-1; Glycosyl transferase, group 1; CDP-glycerol glycerophosphotransferase complement(1069410..1073177) Thioalkalimicrobium cyclicum ALM1 10719751 YP_004537172.1 CDS Thicy_0926 NC_015581.1 1073174 1075000 R KEGG: dak:DaAHT2_1811 hypothetical protein; hypothetical protein complement(1073174..1075000) Thioalkalimicrobium cyclicum ALM1 10719752 YP_004537173.1 CDS Thicy_0927 NC_015581.1 1075002 1075415 R KEGG: cpe:CPE0483 glycerol-3-phosphate cytidyltransferase; TIGRFAM: Cytidyltransferase-related; PFAM: Cytidylyltransferase; cytidyltransferase-related domain-containing protein complement(1075002..1075415) Thioalkalimicrobium cyclicum ALM1 10719753 YP_004537174.1 CDS Thicy_0928 NC_015581.1 1075432 1076886 R PFAM: LicD-like; KEGG: sna:Snas_0746 LicD family protein; LicD family protein complement(1075432..1076886) Thioalkalimicrobium cyclicum ALM1 10719754 YP_004537175.1 CDS Thicy_0929 NC_015581.1 1076895 1077893 R hypothetical protein complement(1076895..1077893) Thioalkalimicrobium cyclicum ALM1 10719755 YP_004537176.1 CDS Thicy_0930 NC_015581.1 1077931 1078932 R hypothetical protein complement(1077931..1078932) Thioalkalimicrobium cyclicum ALM1 10719756 YP_004537177.1 CDS Thicy_0931 NC_015581.1 1078946 1080409 R PFAM: CDP-glycerol glycerophosphotransferase; KEGG: sro:Sros_1350 hypothetical protein; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase complement(1078946..1080409) Thioalkalimicrobium cyclicum ALM1 10719757 YP_004537178.1 CDS Thicy_0932 NC_015581.1 1080411 1081619 R PFAM: LicD-like; KEGG: pde:Pden_5030 hypothetical protein; LicD family protein complement(1080411..1081619) Thioalkalimicrobium cyclicum ALM1 10719758 YP_004537179.1 CDS Thicy_0933 NC_015581.1 1081616 1081837 R hypothetical protein complement(1081616..1081837) Thioalkalimicrobium cyclicum ALM1 10719759 YP_004537180.1 CDS Thicy_0934 NC_015581.1 1082066 1082737 R KEGG: hha:Hhal_2342 hypothetical protein; hypothetical protein complement(1082066..1082737) Thioalkalimicrobium cyclicum ALM1 10719760 YP_004537181.1 CDS Thicy_0935 NC_015581.1 1082740 1083360 R KEGG: amt:Amet_0733 TPR repeat-containing protein; hypothetical protein complement(1082740..1083360) Thioalkalimicrobium cyclicum ALM1 10719761 YP_004537182.1 CDS Thicy_0936 NC_015581.1 1083396 1083566 R hypothetical protein complement(1083396..1083566) Thioalkalimicrobium cyclicum ALM1 10719762 YP_004537183.1 CDS Thicy_0937 NC_015581.1 1083568 1084899 R PFAM: O-antigen ligase-related; KEGG: apj:APJL_1150 hypothetical protein; O-antigen polymerase complement(1083568..1084899) Thioalkalimicrobium cyclicum ALM1 10719763 YP_004537184.1 CDS Thicy_0938 NC_015581.1 1084875 1085603 R KEGG: tgr:Tgr7_0475 hypothetical protein; hypothetical protein complement(1084875..1085603) Thioalkalimicrobium cyclicum ALM1 10719764 YP_004537185.1 CDS Thicy_0939 NC_015581.1 1085596 1086657 R KEGG: pfo:Pfl01_0466 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I complement(1085596..1086657) Thioalkalimicrobium cyclicum ALM1 10719765 YP_004537186.1 CDS Thicy_0940 NC_015581.1 1086650 1087714 R KEGG: tcx:Tcr_1513 hypothetical protein; hypothetical protein complement(1086650..1087714) Thioalkalimicrobium cyclicum ALM1 10719766 YP_004537187.1 CDS Thicy_0941 NC_015581.1 1087701 1088813 R KEGG: tcx:Tcr_1513 hypothetical protein; hypothetical protein complement(1087701..1088813) Thioalkalimicrobium cyclicum ALM1 10719767 YP_004537188.1 CDS Thicy_0942 NC_015581.1 1088900 1089541 D hypothetical protein 1088900..1089541 Thioalkalimicrobium cyclicum ALM1 10719768 YP_004537189.1 CDS Thicy_0943 NC_015581.1 1089510 1090547 R KEGG: tcx:Tcr_1516 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I complement(1089510..1090547) Thioalkalimicrobium cyclicum ALM1 10719769 YP_004537190.1 CDS Thicy_0944 NC_015581.1 1090544 1091149 R KEGG: gca:Galf_1479 AAA ATPase; AAA ATPase complement(1090544..1091149) Thioalkalimicrobium cyclicum ALM1 10719770 YP_004537191.1 CDS Thicy_0945 NC_015581.1 1091133 1091312 R hypothetical protein complement(1091133..1091312) Thioalkalimicrobium cyclicum ALM1 10719771 YP_004537192.1 CDS Thicy_0946 NC_015581.1 1091358 1092326 R PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; HAMAP: ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: tcx:Tcr_1517 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(1091358..1092326) Thioalkalimicrobium cyclicum ALM1 10719772 YP_004537193.1 CDS Thicy_0947 NC_015581.1 1092384 1093604 R hypothetical protein complement(1092384..1093604) Thioalkalimicrobium cyclicum ALM1 10719773 YP_004537194.1 CDS Thicy_0948 NC_015581.1 1093677 1094345 D KEGG: tcx:Tcr_1518 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1093677..1094345 Thioalkalimicrobium cyclicum ALM1 10719774 YP_004537195.1 CDS Thicy_0949 NC_015581.1 1094357 1096096 D SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: tcx:Tcr_1519 lipid A export ATP-binding/permease protein MsbA; PFAM: ABC transporter-like; ABC transporter, transmembrane region; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1094357..1096096 Thioalkalimicrobium cyclicum ALM1 10719775 YP_004537196.1 CDS Thicy_0950 NC_015581.1 1096089 1097066 D PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_1520 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1096089..1097066 Thioalkalimicrobium cyclicum ALM1 10719776 YP_004537197.1 CDS Thicy_0951 NC_015581.1 1097079 1097372 R TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; KEGG: hha:Hhal_0558 fis family transcriptional regulator; competence protein ComEA complement(1097079..1097372) Thioalkalimicrobium cyclicum ALM1 10719777 YP_004537198.1 CDS Thicy_0952 NC_015581.1 1097497 1098450 R KEGG: cja:CJA_1443 ribosomal biogenesis GTPase; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related; ribosome biogenesis GTP-binding protein YlqF complement(1097497..1098450) Thioalkalimicrobium cyclicum ALM1 10719778 YP_004537199.1 CDS Thicy_0953 NC_015581.1 1098447 1099394 R KEGG: tcx:Tcr_1267 hypothetical protein; hypothetical protein complement(1098447..1099394) Thioalkalimicrobium cyclicum ALM1 10719779 YP_004537200.1 CDS Thicy_0954 NC_015581.1 1099430 1099882 R PFAM: UspA; KEGG: tcx:Tcr_1714 hypothetical protein; UspA domain-containing protein complement(1099430..1099882) Thioalkalimicrobium cyclicum ALM1 10719780 YP_004537201.1 CDS Thicy_0955 NC_015581.1 1100008 1100682 R KEGG: tcx:Tcr_1268 peptidase M22, glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease; hypothetical protein complement(1100008..1100682) Thioalkalimicrobium cyclicum ALM1 10719781 YP_004537202.1 CDS Thicy_0956 NC_015581.1 1100684 1102654 R SMART: Helicase, ATP-dependent, c2 type; KEGG: tcx:Tcr_1269 helicase C2; helicase c2 complement(1100684..1102654) Thioalkalimicrobium cyclicum ALM1 10719782 YP_004537203.1 CDS Thicy_0957 NC_015581.1 1102813 1102938 D TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: tcx:Tcr_1270 ribosomal protein L36; PFAM: Ribosomal protein L36; 50S ribosomal protein L36 1102813..1102938 Thioalkalimicrobium cyclicum ALM1 10719783 YP_004537204.1 CDS Thicy_0958 NC_015581.1 1103034 1103642 R KEGG: tcx:Tcr_1272 ribonuclease H; PFAM: Ribonuclease HII/HIII; Ribonuclease H complement(1103034..1103642) Thioalkalimicrobium cyclicum ALM1 10719784 YP_004537205.1 CDS Thicy_0959 NC_015581.1 1103643 1104833 R PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: tcx:Tcr_1273 lipid-A-disaccharide synthase; Lipid-A-disaccharide synthase complement(1103643..1104833) Thioalkalimicrobium cyclicum ALM1 10719785 YP_004537206.1 CDS Thicy_0960 NC_015581.1 1104841 1105623 R PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: tcx:Tcr_1274 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase complement(1104841..1105623) Thioalkalimicrobium cyclicum ALM1 10719786 YP_004537207.1 CDS Thicy_0961 NC_015581.1 1105636 1106073 R TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: tcx:Tcr_1275 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (3R)-hydroxymyristoyl-ACP dehydratase complement(1105636..1106073) Thioalkalimicrobium cyclicum ALM1 10719787 YP_004537208.1 CDS Thicy_0962 NC_015581.1 1106108 1107157 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: tcx:Tcr_1276 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(1106108..1107157) Thioalkalimicrobium cyclicum ALM1 10719788 YP_004537209.1 CDS Thicy_0963 NC_015581.1 1107180 1107752 R PFAM: Outer membrane chaperone Skp (OmpH); KEGG: tcx:Tcr_1277 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(1107180..1107752) Thioalkalimicrobium cyclicum ALM1 10719789 YP_004537210.1 CDS Thicy_0964 NC_015581.1 1107790 1110093 R KEGG: tcx:Tcr_1278 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; outer membrane protein assembly complex, YaeT protein complement(1107790..1110093) Thioalkalimicrobium cyclicum ALM1 10719790 YP_004537211.1 CDS Thicy_0965 NC_015581.1 1110086 1111495 R TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; KEGG: tcx:Tcr_1279 putative membrane-associated zinc metallopeptidase; SMART: PDZ/DHR/GLGF; membrane-associated zinc metalloprotease complement(1110086..1111495) Thioalkalimicrobium cyclicum ALM1 10719791 YP_004537212.1 CDS Thicy_0966 NC_015581.1 1111480 1112307 R PFAM: Phosphatidate cytidylyltransferase; KEGG: pfs:PFLU1275 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(1111480..1112307) Thioalkalimicrobium cyclicum ALM1 10719792 YP_004537213.1 CDS Thicy_0967 NC_015581.1 1112301 1113062 R PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: tcx:Tcr_1281 undecaprenyl diphosphate synthase; UDP pyrophosphate synthase complement(1112301..1113062) Thioalkalimicrobium cyclicum ALM1 10719793 YP_004537214.1 CDS Thicy_0968 NC_015581.1 1113156 1113713 R TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: tcx:Tcr_1282 ribosome recycling factor; PFAM: Ribosome recycling factor; Ribosome-recycling factor complement(1113156..1113713) Thioalkalimicrobium cyclicum ALM1 10719794 YP_004537215.1 CDS Thicy_0969 NC_015581.1 1113715 1114434 R TIGRFAM: Uridylate kinase, bacteria; KEGG: tcx:Tcr_1283 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; uridylate kinase complement(1113715..1114434) Thioalkalimicrobium cyclicum ALM1 10719795 YP_004537216.1 CDS Thicy_0970 NC_015581.1 1114608 1115495 R TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: tcx:Tcr_1284 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; elongation factor Ts complement(1114608..1115495) Thioalkalimicrobium cyclicum ALM1 10719796 YP_004537217.1 CDS Thicy_0971 NC_015581.1 1115577 1116320 R KEGG: tcx:Tcr_1285 ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; 30S ribosomal protein S2 complement(1115577..1116320) Thioalkalimicrobium cyclicum ALM1 10719797 YP_004537218.1 CDS Thicy_0972 NC_015581.1 1116568 1117350 D TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: psa:PST_1536 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; methionine aminopeptidase 1116568..1117350 Thioalkalimicrobium cyclicum ALM1 10719798 YP_004537219.1 CDS Thicy_0973 NC_015581.1 1117366 1120002 D KEGG: tcx:Tcr_1287 UTP-GlnB (protein PII) uridylyltransferase, GlnD; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region; UTP-GlnB uridylyltransferase, GlnD 1117366..1120002 Thioalkalimicrobium cyclicum ALM1 10719799 YP_004537220.1 CDS Thicy_0974 NC_015581.1 1120207 1120560 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asa:ASA_0777 hypothetical protein; antibiotic biosynthesis monooxygenase complement(1120207..1120560) Thioalkalimicrobium cyclicum ALM1 10719801 YP_004537221.1 CDS Thicy_0975 NC_015581.1 1120639 1121511 R hypothetical protein complement(1120639..1121511) Thioalkalimicrobium cyclicum ALM1 10719802 YP_004537222.1 CDS Thicy_0976 NC_015581.1 1121511 1122587 R TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: amc:MADE_00991 dTDP-glucose 4,6 dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(1121511..1122587) Thioalkalimicrobium cyclicum ALM1 10719803 YP_004537223.1 CDS Thicy_0977 NC_015581.1 1122584 1123639 R TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: fph:Fphi_1252 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(1122584..1123639) Thioalkalimicrobium cyclicum ALM1 10719804 YP_004537224.1 CDS Thicy_0978 NC_015581.1 1123620 1124186 R TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: ctt:CtCNB1_2759 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1123620..1124186) Thioalkalimicrobium cyclicum ALM1 10719805 YP_004537225.1 CDS Thicy_0979 NC_015581.1 1124440 1125729 R TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: tcx:Tcr_0768 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; seryl-tRNA synthetase complement(1124440..1125729) Thioalkalimicrobium cyclicum ALM1 10719807 YP_004537226.1 CDS Thicy_0980 NC_015581.1 1125754 1126143 R TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: tcx:Tcr_0767 CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB-like protein complement(1125754..1126143) Thioalkalimicrobium cyclicum ALM1 10719808 YP_004537227.1 CDS Thicy_0981 NC_015581.1 1126140 1127477 R KEGG: tcx:Tcr_0766 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; AAA ATPase central domain-containing protein complement(1126140..1127477) Thioalkalimicrobium cyclicum ALM1 10719809 YP_004537228.1 CDS Thicy_0982 NC_015581.1 1127486 1128109 R PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: tcx:Tcr_0765 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(1127486..1128109) Thioalkalimicrobium cyclicum ALM1 10719810 YP_004537229.1 CDS Thicy_0983 NC_015581.1 1128150 1130843 R PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: tcx:Tcr_0764 cell divisionFtsK/SpoIIIE; cell division protein FtsK/SpoIIIE complement(1128150..1130843) Thioalkalimicrobium cyclicum ALM1 10719811 YP_004537230.1 CDS Thicy_0984 NC_015581.1 1131010 1131963 D TIGRFAM: Thioredoxin reductase; KEGG: tcx:Tcr_0763 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1131010..1131963 Thioalkalimicrobium cyclicum ALM1 10719812 YP_004537231.1 CDS Thicy_0985 NC_015581.1 1132108 1133682 R TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: tcx:Tcr_0970 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; peptide chain release factor 3 complement(1132108..1133682) Thioalkalimicrobium cyclicum ALM1 10719813 YP_004537232.1 CDS Thicy_0986 NC_015581.1 1133775 1134821 R KEGG: tcx:Tcr_1330 SecF protein; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(1133775..1134821) Thioalkalimicrobium cyclicum ALM1 10719814 YP_004537233.1 CDS Thicy_0987 NC_015581.1 1134831 1136714 R KEGG: tcx:Tcr_1331 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(1134831..1136714) Thioalkalimicrobium cyclicum ALM1 10719815 YP_004537234.1 CDS Thicy_0988 NC_015581.1 1136817 1137251 R KEGG: tcx:Tcr_1332 preprotein translocase, YajC subunit; TIGRFAM: YajC; PFAM: YajC; preprotein translocase subunit YajC complement(1136817..1137251) Thioalkalimicrobium cyclicum ALM1 10719816 YP_004537235.1 CDS Thicy_0989 NC_015581.1 1137355 1138470 R PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: tcx:Tcr_1333 queuine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(1137355..1138470) Thioalkalimicrobium cyclicum ALM1 10719817 YP_004537236.1 CDS Thicy_0990 NC_015581.1 1138576 1139607 R TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: tcx:Tcr_1334 S-adenosylmethionine; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(1138576..1139607) Thioalkalimicrobium cyclicum ALM1 10719818 YP_004537237.1 CDS Thicy_0991 NC_015581.1 1140377 1142104 R KEGG: vfi:VF_1123 putative lipoprotein; hypothetical protein complement(1140377..1142104) Thioalkalimicrobium cyclicum ALM1 10719819 YP_004537238.1 CDS Thicy_0992 NC_015581.1 1142328 1144073 R KEGG: vfi:VF_1123 putative lipoprotein; hypothetical protein complement(1142328..1144073) Thioalkalimicrobium cyclicum ALM1 10719820 YP_004537239.1 CDS Thicy_0993 NC_015581.1 1144409 1144546 D hypothetical protein 1144409..1144546 Thioalkalimicrobium cyclicum ALM1 10719821 YP_004537240.1 CDS Thicy_0994 NC_015581.1 1144501 1146042 R KEGG: tcx:Tcr_2018 hypothetical protein; hypothetical protein complement(1144501..1146042) Thioalkalimicrobium cyclicum ALM1 10719822 YP_004537241.1 CDS Thicy_0995 NC_015581.1 1146066 1146242 R hypothetical protein complement(1146066..1146242) Thioalkalimicrobium cyclicum ALM1 10719823 YP_004537242.1 CDS Thicy_0996 NC_015581.1 1146393 1147175 R KEGG: tcx:Tcr_0260 type II secretion system protein N; hypothetical protein complement(1146393..1147175) Thioalkalimicrobium cyclicum ALM1 10719824 YP_004537243.1 CDS Thicy_0997 NC_015581.1 1147172 1147684 R PFAM: General secretion pathway M protein; KEGG: tcx:Tcr_0259 general secretion pathway M protein; general secretion pathway protein M complement(1147172..1147684) Thioalkalimicrobium cyclicum ALM1 10719825 YP_004537244.1 CDS Thicy_0998 NC_015581.1 1147668 1148765 R PFAM: General secretion pathway L; KEGG: tcx:Tcr_0258 general secretion pathway L; general secretion pathway protein L complement(1147668..1148765) Thioalkalimicrobium cyclicum ALM1 10719826 YP_004537245.1 CDS Thicy_0999 NC_015581.1 1148758 1149717 R KEGG: tcx:Tcr_0257 general secretion pathway protein K; general secretion pathway protein K complement(1148758..1149717) Thioalkalimicrobium cyclicum ALM1 10719827 YP_004537246.1 CDS Thicy_1000 NC_015581.1 1149704 1150327 R TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: tcx:Tcr_0256 general secretion pathway protein J; general secretion pathway protein J complement(1149704..1150327) Thioalkalimicrobium cyclicum ALM1 10719828 YP_004537247.1 CDS Thicy_1001 NC_015581.1 1150324 1150713 R KEGG: tcx:Tcr_0255 general secretion pathway protein I; general secretion pathway protein I complement(1150324..1150713) Thioalkalimicrobium cyclicum ALM1 10719829 YP_004537248.1 CDS Thicy_1002 NC_015581.1 1150682 1151155 R KEGG: tcx:Tcr_0254 general secretion pathway protein H; general secretion pathway protein H complement(1150682..1151155) Thioalkalimicrobium cyclicum ALM1 10719830 YP_004537249.1 CDS Thicy_1003 NC_015581.1 1151159 1151596 R KEGG: tcx:Tcr_0253 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; general secretion pathway protein G complement(1151159..1151596) Thioalkalimicrobium cyclicum ALM1 10719831 YP_004537250.1 CDS Thicy_1004 NC_015581.1 1151605 1152846 R KEGG: tcx:Tcr_0252 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F complement(1151605..1152846) Thioalkalimicrobium cyclicum ALM1 10719832 YP_004537251.1 CDS Thicy_1005 NC_015581.1 1152848 1154290 R TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: tcx:Tcr_0251 type II secretion system protein E; SMART: ATPase, AAA+ type, core; general secretory pathway protein E complement(1152848..1154290) Thioalkalimicrobium cyclicum ALM1 10719833 YP_004537252.1 CDS Thicy_1006 NC_015581.1 1154293 1156377 R KEGG: tcx:Tcr_0250 type II and III secretion system protein; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like; general secretion pathway protein D complement(1154293..1156377) Thioalkalimicrobium cyclicum ALM1 10719834 YP_004537253.1 CDS Thicy_1007 NC_015581.1 1156402 1157295 R KEGG: tcx:Tcr_0249 hypothetical protein; hypothetical protein complement(1156402..1157295) Thioalkalimicrobium cyclicum ALM1 10719835 YP_004537254.1 CDS Thicy_1008 NC_015581.1 1157631 1158791 D PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: alv:Alvin_0082 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase MsrA 1157631..1158791 Thioalkalimicrobium cyclicum ALM1 10719836 YP_004537255.1 CDS Thicy_1009 NC_015581.1 1158781 1159395 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rce:RC1_1835 translocator protein, LysE family protein; lysine exporter protein LysE/YggA 1158781..1159395 Thioalkalimicrobium cyclicum ALM1 10719837 YP_004537256.1 CDS Thicy_1010 NC_015581.1 1159424 1160845 D KEGG: tcx:Tcr_2019 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061; hypothetical protein 1159424..1160845 Thioalkalimicrobium cyclicum ALM1 10719838 YP_004537257.1 CDS Thicy_1011 NC_015581.1 1161012 1162085 D KEGG: tcx:Tcr_0727 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; folate-binding protein YgfZ 1161012..1162085 Thioalkalimicrobium cyclicum ALM1 10719839 YP_004537258.1 CDS Thicy_1012 NC_015581.1 1162082 1163590 R KEGG: par:Psyc_2003 DNA helicase; DNA helicase complement(1162082..1163590) Thioalkalimicrobium cyclicum ALM1 10719840 YP_004537259.1 CDS Thicy_1013 NC_015581.1 1163587 1165065 R PFAM: Sodium/solute symporter; KEGG: cja:CJA_3387 high affinity choline transporter; Na+/solute symporter complement(1163587..1165065) Thioalkalimicrobium cyclicum ALM1 10719841 YP_004537260.1 CDS Thicy_1014 NC_015581.1 1165336 1166010 R KEGG: tcx:Tcr_0901 ExsB; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like; exsB protein complement(1165336..1166010) Thioalkalimicrobium cyclicum ALM1 10719843 YP_004537261.1 CDS Thicy_1015 NC_015581.1 1166010 1166759 R TIGRFAM: Tol-Pal system, YbgF; KEGG: tcx:Tcr_0900 TPR repeat-containing protein; tol-pal system protein YbgF complement(1166010..1166759) Thioalkalimicrobium cyclicum ALM1 10719844 YP_004537262.1 CDS Thicy_1016 NC_015581.1 1166768 1167340 R PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tcx:Tcr_0899 OmpA/MotB; OmpA/MotB domain-containing protein complement(1166768..1167340) Thioalkalimicrobium cyclicum ALM1 10719845 YP_004537263.1 CDS Thicy_1017 NC_015581.1 1167383 1168711 R TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: tcx:Tcr_0898 TolB-like; PFAM: TolB, N-terminal; WD40-like Beta Propeller; protein tolB complement(1167383..1168711) Thioalkalimicrobium cyclicum ALM1 10719846 YP_004537264.1 CDS Thicy_1018 NC_015581.1 1168753 1169763 R KEGG: tcx:Tcr_0897 hypothetical protein; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA; protein TolA complement(1168753..1169763) Thioalkalimicrobium cyclicum ALM1 10719847 YP_004537265.1 CDS Thicy_1019 NC_015581.1 1169760 1170212 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tcx:Tcr_0896 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1169760..1170212) Thioalkalimicrobium cyclicum ALM1 10719848 YP_004537266.1 CDS Thicy_1020 NC_015581.1 1170225 1170902 R KEGG: tcx:Tcr_0895 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ complement(1170225..1170902) Thioalkalimicrobium cyclicum ALM1 10719849 YP_004537267.1 CDS Thicy_1021 NC_015581.1 1170907 1171917 R SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: tcx:Tcr_0894 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; Holliday junction ATP-dependent DNA helicase ruvB complement(1170907..1171917) Thioalkalimicrobium cyclicum ALM1 10719850 YP_004537268.1 CDS Thicy_1022 NC_015581.1 1171914 1172525 R SMART: Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Bacterial DNA recombination protein RuvA; KEGG: tcx:Tcr_0893 Holliday junction DNA helicase RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; Holliday junction ATP-dependent DNA helicase ruvA complement(1171914..1172525) Thioalkalimicrobium cyclicum ALM1 10719851 YP_004537269.1 CDS Thicy_1023 NC_015581.1 1172565 1173095 R PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: tcx:Tcr_0892 crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC complement(1172565..1173095) Thioalkalimicrobium cyclicum ALM1 10719852 YP_004537270.1 CDS Thicy_1024 NC_015581.1 1173095 1173850 R TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: alv:Alvin_0153 hypothetical protein; PFAM: Protein of unknown function DUF28; hypothetical protein complement(1173095..1173850) Thioalkalimicrobium cyclicum ALM1 10719853 YP_004537271.1 CDS Thicy_1025 NC_015581.1 1173882 1174979 R TIGRFAM: Quinolinate synthetase A; KEGG: tcx:Tcr_0891 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A complement(1173882..1174979) Thioalkalimicrobium cyclicum ALM1 10719854 YP_004537272.1 CDS Thicy_1026 NC_015581.1 1174979 1176766 R TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: tcx:Tcr_0890 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; aspartyl-tRNA synthetase complement(1174979..1176766) Thioalkalimicrobium cyclicum ALM1 10719855 YP_004537273.1 CDS Thicy_1027 NC_015581.1 1176862 1177554 R PFAM: Protein of unknown function DUF502; KEGG: tcx:Tcr_0889 hypothetical protein; hypothetical protein complement(1176862..1177554) Thioalkalimicrobium cyclicum ALM1 10719856 YP_004537274.1 CDS Thicy_1028 NC_015581.1 1177692 1178570 D PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pin:Ping_3154 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1177692..1178570 Thioalkalimicrobium cyclicum ALM1 10719857 YP_004537275.1 CDS Thicy_1029 NC_015581.1 1178573 1179478 D KEGG: tcx:Tcr_1388 polyprenyl synthetase; PFAM: Polyprenyl synthetase; Geranyltranstransferase 1178573..1179478 Thioalkalimicrobium cyclicum ALM1 10719858 YP_004537276.1 CDS Thicy_1030 NC_015581.1 1179524 1179910 D KEGG: tcx:Tcr_1389 putative 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; queuosine biosynthesis protein QueD 1179524..1179910 Thioalkalimicrobium cyclicum ALM1 10719859 YP_004537277.1 CDS Thicy_1031 NC_015581.1 1179927 1180733 D KEGG: tcx:Tcr_1391 prepilin peptidase; PFAM: Peptidase A24A, prepilin type IV; prepilin peptidase 1179927..1180733 Thioalkalimicrobium cyclicum ALM1 10719860 YP_004537278.1 CDS Thicy_1032 NC_015581.1 1180761 1181090 R KEGG: tcx:Tcr_1392 hypothetical protein; hypothetical protein complement(1180761..1181090) Thioalkalimicrobium cyclicum ALM1 10719861 YP_004537279.1 CDS Thicy_1033 NC_015581.1 1181278 1182345 D TIGRFAM: DHAP synthase, class 1; KEGG: tcx:Tcr_1393 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1181278..1182345 Thioalkalimicrobium cyclicum ALM1 10719862 YP_004537280.1 CDS Thicy_1034 NC_015581.1 1182304 1182417 R hypothetical protein complement(1182304..1182417) Thioalkalimicrobium cyclicum ALM1 10719863 YP_004537281.1 CDS Thicy_1035 NC_015581.1 1182389 1183372 R TIGRFAM: Thiamine-monophosphate kinase; KEGG: tcx:Tcr_1395 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; thiamine-monophosphate kinase complement(1182389..1183372) Thioalkalimicrobium cyclicum ALM1 10719864 YP_004537282.1 CDS Thicy_1036 NC_015581.1 1183381 1183884 R TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: tcx:Tcr_1396 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(1183381..1183884) Thioalkalimicrobium cyclicum ALM1 10719865 YP_004537283.1 CDS Thicy_1037 NC_015581.1 1183888 1184349 R TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: tcx:Tcr_1397 riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(1183888..1184349) Thioalkalimicrobium cyclicum ALM1 10719866 YP_004537284.1 CDS Thicy_1038 NC_015581.1 1184354 1185469 R TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: tcx:Tcr_1398 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1184354..1185469) Thioalkalimicrobium cyclicum ALM1 10719867 YP_004537285.1 CDS Thicy_1039 NC_015581.1 1185501 1186148 R TIGRFAM: Lumazine-binding protein; KEGG: tcx:Tcr_1399 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(1185501..1186148) Thioalkalimicrobium cyclicum ALM1 10719868 YP_004537286.1 CDS Thicy_1040 NC_015581.1 1186150 1187310 R PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; manually curated; KEGG: hel:HELO_3591 riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; riboflavin biosynthesis protein RibD complement(1186150..1187310) Thioalkalimicrobium cyclicum ALM1 10719869 YP_004537287.1 CDS Thicy_1041 NC_015581.1 1187322 1187789 R TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: tcx:Tcr_1401 transcriptional regulator NrdR; PFAM: ATP-cone; transcriptional repressor nrdR complement(1187322..1187789) Thioalkalimicrobium cyclicum ALM1 10719870 YP_004537288.1 CDS Thicy_1042 NC_015581.1 1187803 1189077 R KEGG: tcx:Tcr_1402 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(1187803..1189077) Thioalkalimicrobium cyclicum ALM1 10719871 YP_004537289.1 CDS Thicy_1043 NC_015581.1 1189236 1190903 D TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: tcx:Tcr_1403 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core; ChvD family ATP-binding protein 1189236..1190903 Thioalkalimicrobium cyclicum ALM1 10719872 YP_004537290.1 CDS Thicy_1044 NC_015581.1 1190914 1191831 D TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; PAS fold-4; KEGG: tcx:Tcr_1404 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; diguanylate cyclase 1190914..1191831 Thioalkalimicrobium cyclicum ALM1 10719873 YP_004537291.1 CDS Thicy_1045 NC_015581.1 1191886 1192368 D KEGG: tcx:Tcr_2005 hypothetical protein; hypothetical protein 1191886..1192368 Thioalkalimicrobium cyclicum ALM1 10719874 YP_004537292.1 CDS Thicy_1046 NC_015581.1 1192429 1193100 R KEGG: tcx:Tcr_1382 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; two component transcriptional regulator, LuxR family complement(1192429..1193100) Thioalkalimicrobium cyclicum ALM1 10719875 YP_004537293.1 CDS Thicy_1047 NC_015581.1 1193383 1194768 D HAMAP: Fumarate hydratase class II; KEGG: tcx:Tcr_1384 fumarate hydratase; PFAM: Fumarate lyase; Fumarase C, C-terminal; class II fumarate hydratase 1193383..1194768 Thioalkalimicrobium cyclicum ALM1 10719876 YP_004537294.1 CDS Thicy_1048 NC_015581.1 1194793 1195161 D KEGG: tcx:Tcr_1385 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1194793..1195161 Thioalkalimicrobium cyclicum ALM1 10719877 YP_004537295.1 CDS Thicy_1049 NC_015581.1 1195214 1196113 R PFAM: ROK; KEGG: tcx:Tcr_0885 ROK; ROK family protein complement(1195214..1196113) Thioalkalimicrobium cyclicum ALM1 10719878 YP_004537296.1 CDS Thicy_1050 NC_015581.1 1196110 1196928 R PFAM: Protein of unknown function DUF455; KEGG: tcx:Tcr_0883 hypothetical protein; hypothetical protein complement(1196110..1196928) Thioalkalimicrobium cyclicum ALM1 10719879 YP_004537297.1 CDS Thicy_1051 NC_015581.1 1197059 1197439 R KEGG: tcx:Tcr_0882 hypothetical protein; hypothetical protein complement(1197059..1197439) Thioalkalimicrobium cyclicum ALM1 10719880 YP_004537298.1 CDS Thicy_1052 NC_015581.1 1197551 1198027 R TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: tcx:Tcr_0880 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreA complement(1197551..1198027) Thioalkalimicrobium cyclicum ALM1 10719881 YP_004537299.1 CDS Thicy_1053 NC_015581.1 1198101 1201316 R TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: tcx:Tcr_0879 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; carbamoyl-phosphate synthase large subunit complement(1198101..1201316) Thioalkalimicrobium cyclicum ALM1 10719882 YP_004537300.1 CDS Thicy_1054 NC_015581.1 1201340 1202482 R TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: tcx:Tcr_0878 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; carbamoyl-phosphate synthase small subunit complement(1201340..1202482) Thioalkalimicrobium cyclicum ALM1 10719883 YP_004537301.1 CDS Thicy_1055 NC_015581.1 1202684 1203496 R PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: tcx:Tcr_0872 dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(1202684..1203496) Thioalkalimicrobium cyclicum ALM1 10719884 YP_004537302.1 CDS Thicy_1056 NC_015581.1 1203493 1204644 R SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: tcx:Tcr_0871 heat shock protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal; chaperone protein dnaJ complement(1203493..1204644) Thioalkalimicrobium cyclicum ALM1 10719885 YP_004537303.1 CDS Thicy_1057 NC_015581.1 1204799 1206715 R TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: tcx:Tcr_0870 heat shock protein HSP70; PFAM: Heat shock protein 70; chaperone protein dnaK complement(1204799..1206715) Thioalkalimicrobium cyclicum ALM1 10719886 YP_004537304.1 CDS Thicy_1058 NC_015581.1 1206806 1207378 R KEGG: tcx:Tcr_0869 GrpE protein; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor; protein grpE complement(1206806..1207378) Thioalkalimicrobium cyclicum ALM1 10719887 YP_004537305.1 CDS Thicy_1059 NC_015581.1 1207566 1208441 D KEGG: tcx:Tcr_0867 NAD(+) kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; inorganic polyphosphate/ATP-NAD kinase 1207566..1208441 Thioalkalimicrobium cyclicum ALM1 10719888 YP_004537306.1 CDS Thicy_1060 NC_015581.1 1208441 1210111 D KEGG: tcx:Tcr_0866 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; DNA repair protein RecN 1208441..1210111 Thioalkalimicrobium cyclicum ALM1 10719889 YP_004537307.1 CDS Thicy_1061 NC_015581.1 1210121 1210552 R PFAM: Ferric-uptake regulator; KEGG: tcx:Tcr_1405 ferric uptake regulator family protein; Fur family ferric uptake regulator complement(1210121..1210552) Thioalkalimicrobium cyclicum ALM1 10719890 YP_004537308.1 CDS Thicy_1062 NC_015581.1 1210731 1211087 D PFAM: SmpA/OmlA; KEGG: tcx:Tcr_1406 SmpA/OmlA; SmpA/OmlA domain-containing protein 1210731..1211087 Thioalkalimicrobium cyclicum ALM1 10719891 YP_004537309.1 CDS Thicy_1063 NC_015581.1 1211093 1211386 R PFAM: Uncharacterised protein family UPF0125; KEGG: lhk:LHK_00780 UPF0125 protein CV_3462; hypothetical protein complement(1211093..1211386) Thioalkalimicrobium cyclicum ALM1 10719892 YP_004537310.1 CDS Thicy_1064 NC_015581.1 1211379 1211810 R PFAM: Streptomyces cyclase/dehydrase; KEGG: tcx:Tcr_1408 cyclase/dehydrase; cyclase/dehydrase complement(1211379..1211810) Thioalkalimicrobium cyclicum ALM1 10719893 YP_004537311.1 CDS Thicy_1065 NC_015581.1 1211842 1212333 D TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: tcx:Tcr_1409 SsrA-binding protein; PFAM: SsrA-binding protein; SsrA-binding protein 1211842..1212333 Thioalkalimicrobium cyclicum ALM1 10719894 YP_004537312.1 CDS Thicy_1066 NC_015581.1 1212322 1212945 R KEGG: tcx:Tcr_0549 arylesterase; PFAM: Lipase, GDSL; lysophospholipase complement(1212322..1212945) Thioalkalimicrobium cyclicum ALM1 10719895 YP_004537313.1 CDS Thicy_1067 NC_015581.1 1212988 1213680 D PFAM: ABC transporter-like; KEGG: tcx:Tcr_0550 ABC transporter related; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase 1212988..1213680 Thioalkalimicrobium cyclicum ALM1 10719896 YP_004537314.1 CDS Thicy_1068 NC_015581.1 1213671 1216145 D PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tcx:Tcr_0551 hypothetical protein; hypothetical protein 1213671..1216145 Thioalkalimicrobium cyclicum ALM1 10719897 YP_004537315.1 CDS Thicy_1069 NC_015581.1 1216186 1217715 R KEGG: tcx:Tcr_1563 threonine dehydratase, biosynthetic; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; threonine dehydratase, biosynthetic complement(1216186..1217715) Thioalkalimicrobium cyclicum ALM1 10719898 YP_004537316.1 CDS Thicy_1070 NC_015581.1 1217885 1219975 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_1564 TonB-dependent receptor; TonB-dependent receptor 1217885..1219975 Thioalkalimicrobium cyclicum ALM1 10719899 YP_004537317.1 CDS Thicy_1071 NC_015581.1 1220056 1220673 D PFAM: Copper chaperone SCO1/SenC; KEGG: tcx:Tcr_1565 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 1220056..1220673 Thioalkalimicrobium cyclicum ALM1 10719900 YP_004537318.1 CDS Thicy_1072 NC_015581.1 1220710 1221225 D PFAM: DR1885-like metal-binding protein; KEGG: tcx:Tcr_1566 hypothetical protein; hypothetical protein 1220710..1221225 Thioalkalimicrobium cyclicum ALM1 10719901 YP_004537319.1 CDS Thicy_1073 NC_015581.1 1221229 1221552 R KEGG: sde:Sde_1197 hypothetical protein; hypothetical protein complement(1221229..1221552) Thioalkalimicrobium cyclicum ALM1 10719902 YP_004537320.1 CDS Thicy_1074 NC_015581.1 1221611 1221907 D KEGG: tcx:Tcr_0760 hypothetical protein; hypothetical protein 1221611..1221907 Thioalkalimicrobium cyclicum ALM1 10719903 YP_004537321.1 CDS Thicy_1075 NC_015581.1 1222030 1222245 D KEGG: xau:Xaut_1105 hypothetical protein; hypothetical protein 1222030..1222245 Thioalkalimicrobium cyclicum ALM1 10719904 YP_004537322.1 CDS Thicy_1076 NC_015581.1 1222273 1224261 R KEGG: tcx:Tcr_1174 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; ABC transporter complement(1222273..1224261) Thioalkalimicrobium cyclicum ALM1 10719905 YP_004537323.1 CDS Thicy_1077 NC_015581.1 1224248 1224952 R PFAM: ABC transporter-like; KEGG: tcx:Tcr_1173 lipoprotein releasing system, ATP-binding protein; SMART: ATPase, AAA+ type, core; phosphonate-transporting ATPase complement(1224248..1224952) Thioalkalimicrobium cyclicum ALM1 10719906 YP_004537324.1 CDS Thicy_1078 NC_015581.1 1224945 1226198 R KEGG: tcx:Tcr_1172 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted; lipoprotein releasing system transmembrane protein LolC/E family complement(1224945..1226198) Thioalkalimicrobium cyclicum ALM1 10719907 YP_004537325.1 CDS Thicy_1079 NC_015581.1 1226214 1226843 R PFAM: Uncharacterised protein family UPF0126; KEGG: tcx:Tcr_1171 hypothetical protein; hypothetical protein complement(1226214..1226843) Thioalkalimicrobium cyclicum ALM1 10719908 YP_004537326.1 CDS Thicy_1080 NC_015581.1 1226988 1230470 D TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: tcx:Tcr_1168 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; transcription-repair coupling factor 1226988..1230470 Thioalkalimicrobium cyclicum ALM1 10719909 YP_004537327.1 CDS Thicy_1081 NC_015581.1 1230490 1231161 D KEGG: tcx:Tcr_1167 hypothetical protein; hypothetical protein 1230490..1231161 Thioalkalimicrobium cyclicum ALM1 10719910 YP_004537328.1 CDS Thicy_1082 NC_015581.1 1231213 1231479 R TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: tcx:Tcr_1166 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor complement(1231213..1231479) Thioalkalimicrobium cyclicum ALM1 10719911 YP_004537329.1 CDS Thicy_1083 NC_015581.1 1231482 1232294 R KEGG: tcx:Tcr_1165 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD complement(1231482..1232294) Thioalkalimicrobium cyclicum ALM1 10719912 YP_004537330.1 CDS Thicy_1084 NC_015581.1 1232345 1233076 R TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: tcx:Tcr_1164 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal; septum site-determining protein minC complement(1232345..1233076) Thioalkalimicrobium cyclicum ALM1 10719913 YP_004537331.1 CDS Thicy_1085 NC_015581.1 1233092 1233682 R PFAM: Uncharacterised protein family UPF0227; KEGG: sdl:Sdel_0037 protein of unknown function UPF0227; hypothetical protein complement(1233092..1233682) Thioalkalimicrobium cyclicum ALM1 10719914 YP_004537332.1 CDS Thicy_1086 NC_015581.1 1233694 1233912 R KEGG: tkm:TK90_2060 hypothetical protein; hypothetical protein complement(1233694..1233912) Thioalkalimicrobium cyclicum ALM1 10719915 YP_004537333.1 CDS Thicy_1087 NC_015581.1 1233905 1234672 R PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: tcx:Tcr_0960 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1233905..1234672) Thioalkalimicrobium cyclicum ALM1 10719916 YP_004537334.1 CDS Thicy_1088 NC_015581.1 1234678 1234884 R KEGG: tcx:Tcr_0959 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343; hypothetical protein complement(1234678..1234884) Thioalkalimicrobium cyclicum ALM1 10719917 YP_004537335.1 CDS Thicy_1089 NC_015581.1 1234913 1236016 R PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: nhl:Nhal_0526 tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1234913..1236016) Thioalkalimicrobium cyclicum ALM1 10719918 YP_004537336.1 CDS Thicy_1090 NC_015581.1 1236016 1237992 R PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: cja:CJA_3513 glutathione-regulated potassium-efflux system protein; sodium/hydrogen exchanger complement(1236016..1237992) Thioalkalimicrobium cyclicum ALM1 10719919 YP_004537337.1 CDS Thicy_1091 NC_015581.1 1238082 1240799 R TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tgr:Tgr7_0291 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; P-type HAD superfamily ATPase complement(1238082..1240799) Thioalkalimicrobium cyclicum ALM1 10719920 YP_004537338.1 CDS Thicy_1092 NC_015581.1 1240822 1242321 R PFAM: Protein of unknown function DUF1538; KEGG: wsu:WS0013 hypothetical protein; hypothetical protein complement(1240822..1242321) Thioalkalimicrobium cyclicum ALM1 10719921 YP_004537339.1 CDS Thicy_1093 NC_015581.1 1242328 1242732 R KEGG: wsu:WS0014 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; CBS domain-containing protein complement(1242328..1242732) Thioalkalimicrobium cyclicum ALM1 10719922 YP_004537340.1 CDS Thicy_1094 NC_015581.1 1242732 1243082 R KEGG: wsu:WS0015 hypothetical protein; hypothetical protein complement(1242732..1243082) Thioalkalimicrobium cyclicum ALM1 10719923 YP_004537341.1 CDS Thicy_1095 NC_015581.1 1243188 1245647 R KEGG: tcx:Tcr_0957 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(1243188..1245647) Thioalkalimicrobium cyclicum ALM1 10719924 YP_004537342.1 CDS Thicy_1096 NC_015581.1 1245646 1246194 D KEGG: tcx:Tcr_0956 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2062; hypothetical protein 1245646..1246194 Thioalkalimicrobium cyclicum ALM1 10719925 YP_004537343.1 CDS Thicy_1097 NC_015581.1 1246211 1248619 R KEGG: tcx:Tcr_0955 ATP-dependent protease, putative; ATP-dependent protease complement(1246211..1248619) Thioalkalimicrobium cyclicum ALM1 10719926 YP_004537344.1 CDS Thicy_1098 NC_015581.1 1248653 1249591 D KEGG: tcx:Tcr_0953 putative D-cysteine desulfhydrase, DcyD; putative D-cysteine desulfhydrase, DcyD 1248653..1249591 Thioalkalimicrobium cyclicum ALM1 10719927 YP_004537345.1 CDS Thicy_1099 NC_015581.1 1249726 1250361 D KEGG: tcx:Tcr_1529 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; rhodanese-like protein 1249726..1250361 Thioalkalimicrobium cyclicum ALM1 10719928 YP_004537346.1 CDS Thicy_1100 NC_015581.1 1250434 1257804 R KEGG: har:HEAR1853 hypothetical protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; GLUG; filamentous hemagglutinin family outer membrane protein complement(1250434..1257804) Thioalkalimicrobium cyclicum ALM1 10719929 YP_004537347.1 CDS Thicy_1101 NC_015581.1 1257815 1259467 R PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: mmw:Mmwyl1_3061 polypeptide-transport-associated domain-containing protein; Polypeptide-transport-associated domain-containing protein ShlB-type complement(1257815..1259467) Thioalkalimicrobium cyclicum ALM1 10719930 YP_004537348.1 CDS Thicy_1102 NC_015581.1 1259631 1261901 R TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: tcx:Tcr_1112 AAA ATPase; SMART: ATPase, AAA+ type, core; ATP-dependent Clp protease ATP-binding protein ClpA complement(1259631..1261901) Thioalkalimicrobium cyclicum ALM1 10719931 YP_004537349.1 CDS Thicy_1103 NC_015581.1 1261929 1262225 R KEGG: tcx:Tcr_1111 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core; ATP-dependent Clp protease adapter protein clpS complement(1261929..1262225) Thioalkalimicrobium cyclicum ALM1 10719932 YP_004537350.1 CDS Thicy_1104 NC_015581.1 1262544 1263113 D KEGG: etr:ETAE_2051 ribosomal large subunit pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; pseudouridine synthase Rsu 1262544..1263113 Thioalkalimicrobium cyclicum ALM1 10719933 YP_004537351.1 CDS Thicy_1105 NC_015581.1 1263146 1264315 D TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: tcx:Tcr_1099 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; tRNA-specific 2-thiouridylase mnmA 1263146..1264315 Thioalkalimicrobium cyclicum ALM1 10719934 YP_004537352.1 CDS Thicy_1106 NC_015581.1 1264322 1265002 D KEGG: tcx:Tcr_1098 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274; High frequency lysogenization protein hflD 1264322..1265002 Thioalkalimicrobium cyclicum ALM1 10719935 YP_004537353.1 CDS Thicy_1107 NC_015581.1 1265022 1265717 R PFAM: Glutathione S-transferase, N-terminal; KEGG: tcx:Tcr_1309 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(1265022..1265717) Thioalkalimicrobium cyclicum ALM1 10719936 YP_004537354.1 CDS Thicy_1108 NC_015581.1 1265760 1266017 R PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tcx:Tcr_1311 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(1265760..1266017) Thioalkalimicrobium cyclicum ALM1 10719937 YP_004537355.1 CDS Thicy_1109 NC_015581.1 1266046 1267497 R PFAM: Peptidase U32; KEGG: tcx:Tcr_1312 peptidase U32; peptidase U32 complement(1266046..1267497) Thioalkalimicrobium cyclicum ALM1 10719938 YP_004537356.1 CDS Thicy_1110 NC_015581.1 1267716 1268183 R KEGG: swp:swp_4704 hypothetical protein; hypothetical protein complement(1267716..1268183) Thioalkalimicrobium cyclicum ALM1 10719939 YP_004537357.1 CDS Thicy_1111 NC_015581.1 1268253 1269599 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: tcx:Tcr_1314 hypothetical protein; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; 30S ribosomal protein S12 methylthiotransferase RimO complement(1268253..1269599) Thioalkalimicrobium cyclicum ALM1 10719940 YP_004537358.1 CDS Thicy_1112 NC_015581.1 1269632 1270147 R hypothetical protein complement(1269632..1270147) Thioalkalimicrobium cyclicum ALM1 10719941 YP_004537359.1 CDS Thicy_1113 NC_015581.1 1270231 1270596 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gca:Galf_1707 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1270231..1270596) Thioalkalimicrobium cyclicum ALM1 10719942 YP_004537360.1 CDS Thicy_1114 NC_015581.1 1270693 1271520 D TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG: tcx:Tcr_1289 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1270693..1271520 Thioalkalimicrobium cyclicum ALM1 10719943 YP_004537361.1 CDS Thicy_1115 NC_015581.1 1271577 1271909 D KEGG: swd:Swoo_2189 arsenate reductase and related; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like; ArsC family protein 1271577..1271909 Thioalkalimicrobium cyclicum ALM1 10719944 YP_004537362.1 CDS Thicy_1116 NC_015581.1 1271906 1273057 D TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: tcx:Tcr_1291 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; Succinyl-diaminopimelate desuccinylase 1271906..1273057 Thioalkalimicrobium cyclicum ALM1 10719945 YP_004537363.1 CDS Thicy_1117 NC_015581.1 1273058 1273288 D hypothetical protein 1273058..1273288 Thioalkalimicrobium cyclicum ALM1 10719946 YP_004537364.1 CDS Thicy_1118 NC_015581.1 1273323 1273814 D KEGG: tcx:Tcr_1292 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1273323..1273814 Thioalkalimicrobium cyclicum ALM1 10719947 YP_004537365.1 CDS Thicy_1119 NC_015581.1 1273854 1275299 R PFAM: Sodium:neurotransmitter symporter; KEGG: tcx:Tcr_1293 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter complement(1273854..1275299) Thioalkalimicrobium cyclicum ALM1 10719948 YP_004537366.1 CDS Thicy_1120 NC_015581.1 1275359 1276384 D PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: tcx:Tcr_1294 UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 1275359..1276384 Thioalkalimicrobium cyclicum ALM1 10719949 YP_004537367.1 CDS Thicy_1121 NC_015581.1 1276379 1277428 R KEGG: mep:MPQ_1010 glycoside hydrolase family 3 domain protein; HAMAP: Beta-hexosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; beta-hexosaminidase complement(1276379..1277428) Thioalkalimicrobium cyclicum ALM1 10719950 YP_004537368.1 CDS Thicy_1122 NC_015581.1 1277447 1278250 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: nhl:Nhal_2857 binding-protein-dependent transport systems inner membrane component; ABC transporter permease complement(1277447..1278250) Thioalkalimicrobium cyclicum ALM1 10719951 YP_004537369.1 CDS Thicy_1123 NC_015581.1 1278247 1279167 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: tcx:Tcr_1299 binding-protein dependent transport system inner membrane protein; ABC transporter permease complement(1278247..1279167) Thioalkalimicrobium cyclicum ALM1 10719952 YP_004537370.1 CDS Thicy_1124 NC_015581.1 1279178 1279660 R PFAM: YkuD domain; KEGG: gpb:HDN1F_12890 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(1279178..1279660) Thioalkalimicrobium cyclicum ALM1 10719953 YP_004537371.1 CDS Thicy_1125 NC_015581.1 1279671 1281320 R KEGG: tcx:Tcr_1372 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase complement(1279671..1281320) Thioalkalimicrobium cyclicum ALM1 10719954 YP_004537372.1 CDS Thicy_1126 NC_015581.1 1281322 1282206 R TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: tcx:Tcr_1373 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; succinyl-CoA synthetase subunit alpha complement(1281322..1282206) Thioalkalimicrobium cyclicum ALM1 10719955 YP_004537373.1 CDS Thicy_1127 NC_015581.1 1282203 1283378 R PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: tcx:Tcr_1374 succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase [ADP-forming] subunit beta complement(1282203..1283378) Thioalkalimicrobium cyclicum ALM1 10719956 YP_004537374.1 CDS Thicy_1128 NC_015581.1 1283499 1283777 D KEGG: pst:PSPTO_0825 hypothetical protein; hypothetical protein 1283499..1283777 Thioalkalimicrobium cyclicum ALM1 10719957 YP_004537375.1 CDS Thicy_1129 NC_015581.1 1283774 1284226 R PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: sde:Sde_2564 ribosomal protein S2; FKBP-type peptidylprolyl isomerase complement(1283774..1284226) Thioalkalimicrobium cyclicum ALM1 10719958 YP_004537376.1 CDS Thicy_1130 NC_015581.1 1284240 1284635 R KEGG: tcx:Tcr_1378 hypothetical protein; hypothetical protein complement(1284240..1284635) Thioalkalimicrobium cyclicum ALM1 10719959 YP_004537377.1 CDS Thicy_1131 NC_015581.1 1284753 1285202 D KEGG: slt:Slit_0171 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022; hypothetical protein 1284753..1285202 Thioalkalimicrobium cyclicum ALM1 10719960 YP_004537378.1 CDS Thicy_1132 NC_015581.1 1285230 1286390 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1381 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1285230..1286390 Thioalkalimicrobium cyclicum ALM1 10719961 YP_004537379.1 CDS Thicy_1133 NC_015581.1 1286416 1286868 R hypothetical protein complement(1286416..1286868) Thioalkalimicrobium cyclicum ALM1 10719962 YP_004537380.1 CDS Thicy_1134 NC_015581.1 1286931 1288784 R PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: tcx:Tcr_0721 ABC transporter related; SMART: ATPase, AAA+ type, core; xenobiotic-transporting ATPase complement(1286931..1288784) Thioalkalimicrobium cyclicum ALM1 10719963 YP_004537381.1 CDS Thicy_1135 NC_015581.1 1288781 1289569 R KEGG: tcx:Tcr_0720 TatD-related deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related; TatD family hydrolase complement(1288781..1289569) Thioalkalimicrobium cyclicum ALM1 10719964 YP_004537382.1 CDS Thicy_1136 NC_015581.1 1289578 1290588 R TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tcx:Tcr_0719 DNA-directed DNA polymerase; DNA polymerase III subunit delta' complement(1289578..1290588) Thioalkalimicrobium cyclicum ALM1 10719965 YP_004537383.1 CDS Thicy_1137 NC_015581.1 1290576 1291208 R PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: pmy:Pmen_1633 thymidylate kinase; thymidylate kinase complement(1290576..1291208) Thioalkalimicrobium cyclicum ALM1 10719966 YP_004537384.1 CDS Thicy_1138 NC_015581.1 1291260 1292396 R KEGG: tcx:Tcr_0717 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase complement(1291260..1292396) Thioalkalimicrobium cyclicum ALM1 10719967 YP_004537385.1 CDS Thicy_1139 NC_015581.1 1292409 1293338 R PFAM: Aminotransferase, class IV; KEGG: tcx:Tcr_0716 aminotransferase, class IV; class IV aminotransferase complement(1292409..1293338) Thioalkalimicrobium cyclicum ALM1 10719968 YP_004537386.1 CDS Thicy_1140 NC_015581.1 1293335 1294750 R KEGG: tcx:Tcr_0715 hypothetical protein; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; anthranilate synthase complement(1293335..1294750) Thioalkalimicrobium cyclicum ALM1 10719969 YP_004537387.1 CDS Thicy_1141 NC_015581.1 1294751 1295992 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: tcx:Tcr_0714 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; 3-oxoacyl-ACP synthase II complement(1294751..1295992) Thioalkalimicrobium cyclicum ALM1 10719970 YP_004537388.1 CDS Thicy_1142 NC_015581.1 1296093 1296329 R TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: tcx:Tcr_0713 acyl carrier protein; PFAM: Phosphopantetheine-binding; acyl carrier protein complement(1296093..1296329) Thioalkalimicrobium cyclicum ALM1 10719971 YP_004537389.1 CDS Thicy_1143 NC_015581.1 1296462 1297202 R KEGG: tcx:Tcr_0712 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1296462..1297202) Thioalkalimicrobium cyclicum ALM1 10719972 YP_004537390.1 CDS Thicy_1144 NC_015581.1 1297203 1298144 R TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: tgr:Tgr7_1836 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase complement(1297203..1298144) Thioalkalimicrobium cyclicum ALM1 10719973 YP_004537391.1 CDS Thicy_1145 NC_015581.1 1298202 1299197 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: tcx:Tcr_0710 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase III complement(1298202..1299197) Thioalkalimicrobium cyclicum ALM1 10719974 YP_004537392.1 CDS Thicy_1146 NC_015581.1 1299202 1300239 R TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: tcx:Tcr_0709 fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis plsX protein; phosphate acyltransferase complement(1299202..1300239) Thioalkalimicrobium cyclicum ALM1 10719975 YP_004537393.1 CDS Thicy_1147 NC_015581.1 1300246 1300422 R TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: tcx:Tcr_0708 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; 50S ribosomal protein L32 complement(1300246..1300422) Thioalkalimicrobium cyclicum ALM1 10719976 YP_004537394.1 CDS Thicy_1148 NC_015581.1 1300480 1301001 R PFAM: Protein of unknown function DUF177; KEGG: tcx:Tcr_0707 hypothetical protein; hypothetical protein complement(1300480..1301001) Thioalkalimicrobium cyclicum ALM1 10719977 YP_004537395.1 CDS Thicy_1149 NC_015581.1 1301078 1301713 D TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: fbl:Fbal_1391 maf protein; PFAM: Maf-like protein; Septum formation protein Maf 1301078..1301713 Thioalkalimicrobium cyclicum ALM1 10719978 YP_004537396.1 CDS Thicy_1150 NC_015581.1 1301702 1302364 R KEGG: tcx:Tcr_0705 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; HAD-superfamily hydrolase complement(1301702..1302364) Thioalkalimicrobium cyclicum ALM1 10719979 YP_004537397.1 CDS Thicy_1151 NC_015581.1 1302361 1303323 R TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: tcx:Tcr_0704 pseudouridine synthase, RluD; SMART: RNA-binding S4; pseudouridine synthase Rlu family protein complement(1302361..1303323) Thioalkalimicrobium cyclicum ALM1 10719980 YP_004537398.1 CDS Thicy_1152 NC_015581.1 1303866 1306370 D KEGG: tcx:Tcr_0703 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; ribonuclease, Rne/Rng family 1303866..1306370 Thioalkalimicrobium cyclicum ALM1 10719981 YP_004537399.1 CDS Thicy_1153 NC_015581.1 1306417 1307058 R PFAM: DTW; KEGG: swp:swp_4781 DTW protein; DTW domain containing protein complement(1306417..1307058) Thioalkalimicrobium cyclicum ALM1 10719982 YP_004537400.1 CDS Thicy_1154 NC_015581.1 1307072 1307497 D PFAM: GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1307072..1307497 Thioalkalimicrobium cyclicum ALM1 10719983 YP_004537401.1 CDS Thicy_1155 NC_015581.1 1307520 1308467 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_1555 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1307520..1308467) Thioalkalimicrobium cyclicum ALM1 10719984 YP_004537402.1 CDS Thicy_1156 NC_015581.1 1308619 1309860 R KEGG: tcx:Tcr_1557 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding; FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(1308619..1309860) Thioalkalimicrobium cyclicum ALM1 10719985 YP_004537403.1 CDS Thicy_1157 NC_015581.1 1309876 1311099 R KEGG: tcx:Tcr_1558 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(1309876..1311099) Thioalkalimicrobium cyclicum ALM1 10719986 YP_004537404.1 CDS Thicy_1158 NC_015581.1 1311075 1312457 R PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: tcx:Tcr_1559 peptidase M24; peptidase M24 complement(1311075..1312457) Thioalkalimicrobium cyclicum ALM1 10719987 YP_004537405.1 CDS Thicy_1159 NC_015581.1 1312474 1313046 R KEGG: tcx:Tcr_1560 YgfB and YecA; YgfB and YecA protein complement(1312474..1313046) Thioalkalimicrobium cyclicum ALM1 10719988 YP_004537406.1 CDS Thicy_1160 NC_015581.1 1313175 1313480 D KEGG: tcx:Tcr_1561 hypothetical protein; hypothetical protein 1313175..1313480 Thioalkalimicrobium cyclicum ALM1 10719989 YP_004537407.1 CDS Thicy_1161 NC_015581.1 1313494 1315278 D PFAM: Bacterial surface antigen (D15); KEGG: ilo:IL1887 outer membrane protein; surface antigen (D15) 1313494..1315278 Thioalkalimicrobium cyclicum ALM1 10719990 YP_004537408.1 CDS Thicy_1162 NC_015581.1 1315289 1319239 D PFAM: Protein of unknown function DUF490; KEGG: noc:Noc_0371 hypothetical protein; hypothetical protein 1315289..1319239 Thioalkalimicrobium cyclicum ALM1 10719991 YP_004537409.1 CDS Thicy_1163 NC_015581.1 1319261 1319887 R KEGG: tcx:Tcr_1562 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(1319261..1319887) Thioalkalimicrobium cyclicum ALM1 10719992 YP_004537410.1 CDS Thicy_1164 NC_015581.1 1320239 1320880 D KEGG: sde:Sde_1352 hypothetical protein; hypothetical protein 1320239..1320880 Thioalkalimicrobium cyclicum ALM1 10719994 YP_004537411.1 CDS Thicy_1165 NC_015581.1 1320890 1321702 R hypothetical protein complement(1320890..1321702) Thioalkalimicrobium cyclicum ALM1 10719995 YP_004537412.1 CDS Thicy_1166 NC_015581.1 1321699 1323069 R hypothetical protein complement(1321699..1323069) Thioalkalimicrobium cyclicum ALM1 10719996 YP_004537413.1 CDS Thicy_1167 NC_015581.1 1323056 1324291 R PFAM: Type II secretion system F domain; KEGG: tcx:Tcr_0642 type II secretion system protein; type II secretion system F domain-containing protein complement(1323056..1324291) Thioalkalimicrobium cyclicum ALM1 10719997 YP_004537414.1 CDS Thicy_1168 NC_015581.1 1324284 1325813 R KEGG: tcx:Tcr_0641 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; type II secretion system protein E complement(1324284..1325813) Thioalkalimicrobium cyclicum ALM1 10719998 YP_004537415.1 CDS Thicy_1169 NC_015581.1 1325818 1327338 R PFAM: Type II/III secretion system; KEGG: tcx:Tcr_0639 type II and III secretion system protein; type II and III secretion system protein complement(1325818..1327338) Thioalkalimicrobium cyclicum ALM1 10719999 YP_004537416.1 CDS Thicy_1170 NC_015581.1 1327417 1328799 R TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: tcx:Tcr_0501 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(1327417..1328799) Thioalkalimicrobium cyclicum ALM1 10720000 YP_004537417.1 CDS Thicy_1171 NC_015581.1 1328951 1331266 R HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; KEGG: tcx:Tcr_0499 23S rRNA m(2)G2445 methyltransferase; PFAM: Putative RNA methylase; THUMP; Protein of unknown function methylase putative; Ribosomal RNA large subunit methyltransferase L complement(1328951..1331266) Thioalkalimicrobium cyclicum ALM1 10720001 YP_004537418.1 CDS Thicy_1172 NC_015581.1 1331377 1332600 D KEGG: tcx:Tcr_0498 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like; lytic murein transglycosylase 1331377..1332600 Thioalkalimicrobium cyclicum ALM1 10720002 YP_004537419.1 CDS Thicy_1173 NC_015581.1 1332623 1333717 D KEGG: tcx:Tcr_1704 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1332623..1333717 Thioalkalimicrobium cyclicum ALM1 10720003 YP_004537420.1 CDS Thicy_1174 NC_015581.1 1333732 1336806 D PFAM: Acriflavin resistance protein; KEGG: hna:Hneap_0816 acriflavin resistance protein; acriflavin resistance protein 1333732..1336806 Thioalkalimicrobium cyclicum ALM1 10720004 YP_004537421.1 CDS Thicy_1175 NC_015581.1 1336823 1337347 R PFAM: Peptidase A8, signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: tcx:Tcr_0496 lipoprotein signal peptidase; lipoprotein signal peptidase complement(1336823..1337347) Thioalkalimicrobium cyclicum ALM1 10720005 YP_004537422.1 CDS Thicy_1176 NC_015581.1 1337340 1340168 R TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: tcx:Tcr_0495 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1337340..1340168) Thioalkalimicrobium cyclicum ALM1 10720006 YP_004537423.1 CDS Thicy_1177 NC_015581.1 1340168 1341133 R TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: tcx:Tcr_0494 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(1340168..1341133) Thioalkalimicrobium cyclicum ALM1 10720007 YP_004537424.1 CDS Thicy_1178 NC_015581.1 1341212 1342786 R KEGG: tcx:Tcr_0493 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; integral membrane protein MviN complement(1341212..1342786) Thioalkalimicrobium cyclicum ALM1 10720008 YP_004537425.1 CDS Thicy_1179 NC_015581.1 1342963 1344594 D KEGG: tkm:TK90_0036 thiamine pyrophosphate protein TPP binding domain protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; acetolactate synthase 1342963..1344594 Thioalkalimicrobium cyclicum ALM1 10720009 YP_004537426.1 CDS Thicy_1180 NC_015581.1 1344615 1346387 R KEGG: tcx:Tcr_0391 TPR repeat-containing protein; hypothetical protein complement(1344615..1346387) Thioalkalimicrobium cyclicum ALM1 10720010 YP_004537427.1 CDS Thicy_1181 NC_015581.1 1346397 1348280 R SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA topoisomerase IV, subunit B, Gram-negative; KEGG: tcx:Tcr_0364 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA topoisomerase IV subunit B complement(1346397..1348280) Thioalkalimicrobium cyclicum ALM1 10720011 YP_004537428.1 CDS Thicy_1182 NC_015581.1 1348412 1349059 D PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: reh:H16_A2802 pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 1348412..1349059 Thioalkalimicrobium cyclicum ALM1 10720012 YP_004537429.1 CDS Thicy_1183 NC_015581.1 1349040 1349768 D TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: hna:Hneap_2154 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; Uracil-DNA glycosylase 1349040..1349768 Thioalkalimicrobium cyclicum ALM1 10720013 YP_004537430.1 CDS Thicy_1184 NC_015581.1 1349783 1350502 R KEGG: tcx:Tcr_0357 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1349783..1350502) Thioalkalimicrobium cyclicum ALM1 10720014 YP_004537431.1 CDS Thicy_1185 NC_015581.1 1350499 1351074 R KEGG: tcx:Tcr_0356 histidinol-phosphate phosphatase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase; histidinol-phosphate phosphatase family protein complement(1350499..1351074) Thioalkalimicrobium cyclicum ALM1 10720015 YP_004537432.1 CDS Thicy_1186 NC_015581.1 1351074 1353149 R TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: tcx:Tcr_0355 glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1351074..1353149) Thioalkalimicrobium cyclicum ALM1 10720016 YP_004537433.1 CDS Thicy_1187 NC_015581.1 1353149 1354087 R PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: tcx:Tcr_0354 glycyl-tRNA synthetase subunit alpha; glycyl-tRNA synthetase subunit alpha complement(1353149..1354087) Thioalkalimicrobium cyclicum ALM1 10720017 YP_004537434.1 CDS Thicy_1188 NC_015581.1 1354225 1354488 D PFAM: SirA-like; KEGG: tcx:Tcr_0353 SirA-like; SirA-like domain-containing protein 1354225..1354488 Thioalkalimicrobium cyclicum ALM1 10720018 YP_004537435.1 CDS Thicy_1189 NC_015581.1 1354565 1355884 D PFAM: Peptidase M23; KEGG: tcx:Tcr_0352 peptidase M23B; peptidase M23 1354565..1355884 Thioalkalimicrobium cyclicum ALM1 10720019 YP_004537436.1 CDS Thicy_1190 NC_015581.1 1355897 1357003 D KEGG: tcx:Tcr_0351 anhydro-N-acetylmuramic acid kinase; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; anhydro-N-acetylmuramic acid kinase 1355897..1357003 Thioalkalimicrobium cyclicum ALM1 10720020 YP_004537437.1 CDS Thicy_1191 NC_015581.1 1357140 1357826 R KEGG: tcx:Tcr_0466 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001; hypothetical protein complement(1357140..1357826) Thioalkalimicrobium cyclicum ALM1 10720021 YP_004537438.1 CDS Thicy_1192 NC_015581.1 1358014 1358409 R PFAM: HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0460 ModE family transcriptional regulator; putative ModE family transcriptional regulator complement(1358014..1358409) Thioalkalimicrobium cyclicum ALM1 10720022 YP_004537439.1 CDS Thicy_1193 NC_015581.1 1358829 1361105 D KEGG: tcx:Tcr_0463 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; ATP-cone; Ribonucleotide reductase large subunit, N-terminal; ribonucleoside-diphosphate reductase subunit alpha 1358829..1361105 Thioalkalimicrobium cyclicum ALM1 10720023 YP_004537440.1 CDS Thicy_1194 NC_015581.1 1361124 1362257 D PFAM: Ribonucleotide reductase; KEGG: tcx:Tcr_1763 ribonucleotide-diphosphate reductase subunit beta; ribonucleotide reductase 1361124..1362257 Thioalkalimicrobium cyclicum ALM1 10720024 YP_004537441.1 CDS Thicy_1195 NC_015581.1 1362381 1362956 D KEGG: tcx:Tcr_2156 sigma-24 (FecI-like); TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; ECF subfamily RNA polymerase sigma-24 factor 1362381..1362956 Thioalkalimicrobium cyclicum ALM1 10720025 YP_004537442.1 CDS Thicy_1196 NC_015581.1 1362953 1363639 D KEGG: tcx:Tcr_2155 hypothetical protein; hypothetical protein 1362953..1363639 Thioalkalimicrobium cyclicum ALM1 10720026 YP_004537443.1 CDS Thicy_1197 NC_015581.1 1363767 1364210 D KEGG: tkm:TK90_0691 domain of unknown function DUF1791; hypothetical protein 1363767..1364210 Thioalkalimicrobium cyclicum ALM1 10720027 YP_004537444.1 CDS Thicy_1198 NC_015581.1 1364207 1364575 R PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: ftn:FTN_0384 hypothetical protein; thiol-disulfide oxidoreductase DCC complement(1364207..1364575) Thioalkalimicrobium cyclicum ALM1 10720028 YP_004537445.1 CDS Thicy_1199 NC_015581.1 1364947 1365447 R PFAM: Protein of unknown function DUF336; KEGG: tcx:Tcr_1731 hypothetical protein; hypothetical protein complement(1364947..1365447) Thioalkalimicrobium cyclicum ALM1 10720030 YP_004537446.1 CDS Thicy_1200 NC_015581.1 1365551 1366462 D KEGG: hhe:HH0856 membrane protease subunits; PFAM: Band 7 protein; SMART: Band 7 protein; hypothetical protein 1365551..1366462 Thioalkalimicrobium cyclicum ALM1 10720031 YP_004537447.1 CDS Thicy_1201 NC_015581.1 1366459 1366899 D PFAM: Nodulation efficiency, NfeD; KEGG: abu:Abu_1086 hypothetical protein; hypothetical protein 1366459..1366899 Thioalkalimicrobium cyclicum ALM1 10720032 YP_004537448.1 CDS Thicy_1202 NC_015581.1 1366896 1368071 D KEGG: alv:Alvin_2486 hypothetical protein; PFAM: Protein of unknown function DUF399; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; hypothetical protein 1366896..1368071 Thioalkalimicrobium cyclicum ALM1 10720033 YP_004537449.1 CDS Thicy_1203 NC_015581.1 1368058 1369890 R PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: tgr:Tgr7_2661 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone complement(1368058..1369890) Thioalkalimicrobium cyclicum ALM1 10720034 YP_004537450.1 CDS Thicy_1204 NC_015581.1 1369919 1371295 R KEGG: tcx:Tcr_0100 hypothetical protein; hypothetical protein complement(1369919..1371295) Thioalkalimicrobium cyclicum ALM1 10720035 YP_004537451.1 CDS Thicy_1205 NC_015581.1 1371289 1373118 R KEGG: tcx:Tcr_0099 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A complement(1371289..1373118) Thioalkalimicrobium cyclicum ALM1 10720036 YP_004537452.1 CDS Thicy_1206 NC_015581.1 1373115 1374200 R KEGG: tcx:Tcr_0098 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A complement(1373115..1374200) Thioalkalimicrobium cyclicum ALM1 10720037 YP_004537453.1 CDS Thicy_1207 NC_015581.1 1374193 1374723 R hypothetical protein complement(1374193..1374723) Thioalkalimicrobium cyclicum ALM1 10720038 YP_004537454.1 CDS Thicy_1208 NC_015581.1 1374720 1375637 R PFAM: Protein of unknown function DUF58; KEGG: tcx:Tcr_0096 hypothetical protein; hypothetical protein complement(1374720..1375637) Thioalkalimicrobium cyclicum ALM1 10720039 YP_004537455.1 CDS Thicy_1209 NC_015581.1 1375634 1376620 R KEGG: tcx:Tcr_0095 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core; ATPase complement(1375634..1376620) Thioalkalimicrobium cyclicum ALM1 10720040 YP_004537456.1 CDS Thicy_1210 NC_015581.1 1376688 1376795 D hypothetical protein 1376688..1376795 Thioalkalimicrobium cyclicum ALM1 10720041 YP_004537457.1 CDS Thicy_1211 NC_015581.1 1376826 1378322 R PFAM: Lipopolysaccharide biosynthesis; KEGG: pag:PLES_43781 hypothetical protein; lipopolysaccharide biosynthesis protein complement(1376826..1378322) Thioalkalimicrobium cyclicum ALM1 10720042 YP_004537458.1 CDS Thicy_1212 NC_015581.1 1378319 1378546 R hypothetical protein complement(1378319..1378546) Thioalkalimicrobium cyclicum ALM1 10720043 YP_004537459.1 CDS Thicy_1213 NC_015581.1 1378654 1378893 D manually curated; PFAM: Helix-turn-helix type 3; KEGG: abb:ABBFA_000236 helix-turn-helix family protein; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1378654..1378893 Thioalkalimicrobium cyclicum ALM1 10720044 YP_004537460.1 CDS Thicy_1214 NC_015581.1 1379020 1380414 D KEGG: tcx:Tcr_0948 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1379020..1380414 Thioalkalimicrobium cyclicum ALM1 10720045 YP_004537461.1 CDS Thicy_1215 NC_015581.1 1380470 1393015 R KEGG: rba:RB3527 heme/hemopexin utilization protein HuxA; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; filamentous hemagglutinin family outer membrane protein complement(1380470..1393015) Thioalkalimicrobium cyclicum ALM1 10720046 YP_004537462.1 CDS Thicy_1216 NC_015581.1 1393038 1394831 R PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type complement(1393038..1394831) Thioalkalimicrobium cyclicum ALM1 10720047 YP_004537463.1 CDS Thicy_1217 NC_015581.1 1395061 1396062 D SMART: Helix-turn-helix, AraC domain; KEGG: amr:AM1_G0083 AraC family transcriptional regulator; AraC family transcriptional regulator 1395061..1396062 Thioalkalimicrobium cyclicum ALM1 10720048 YP_004537464.1 CDS Thicy_1218 NC_015581.1 1396152 1397063 R KEGG: tcx:Tcr_0091 hypothetical protein; hypothetical protein complement(1396152..1397063) Thioalkalimicrobium cyclicum ALM1 10720049 YP_004537465.1 CDS Thicy_1219 NC_015581.1 1397109 1398401 R PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0094 major facilitator transporter; major facilitator superfamily protein complement(1397109..1398401) Thioalkalimicrobium cyclicum ALM1 10720050 YP_004537466.1 CDS Thicy_1220 NC_015581.1 1398493 1399233 D KEGG: tcx:Tcr_0093 beta-lactamase-like; beta-lactamase-like protein 1398493..1399233 Thioalkalimicrobium cyclicum ALM1 10720051 YP_004537467.1 CDS Thicy_1221 NC_015581.1 1399253 1399897 D KEGG: tcx:Tcr_2101 ArsR family transcriptional regulator; PFAM: Rhodanese-like; HTH transcriptional regulator, ArsR; SMART: Rhodanese-like; HTH transcriptional regulator, ArsR; ArsR family transcriptional regulator 1399253..1399897 Thioalkalimicrobium cyclicum ALM1 10720052 YP_004537468.1 CDS Thicy_1222 NC_015581.1 1399887 1400759 D PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: tcx:Tcr_2057 fructosamine kinase; fructosamine/Ketosamine-3-kinase 1399887..1400759 Thioalkalimicrobium cyclicum ALM1 10720053 YP_004537469.1 CDS Thicy_1223 NC_015581.1 1400776 1401915 R KEGG: sse:Ssed_2262 glucose dehydrogenase; glucose dehydrogenase complement(1400776..1401915) Thioalkalimicrobium cyclicum ALM1 10720054 YP_004537470.1 CDS Thicy_1224 NC_015581.1 1401932 1403473 R KEGG: alv:Alvin_1406 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(1401932..1403473) Thioalkalimicrobium cyclicum ALM1 10720055 YP_004537471.1 CDS Thicy_1225 NC_015581.1 1403470 1404945 R KEGG: tgr:Tgr7_2663 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) complement(1403470..1404945) Thioalkalimicrobium cyclicum ALM1 10720056 YP_004537472.1 CDS Thicy_1226 NC_015581.1 1404942 1405244 R PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: tgr:Tgr7_2664 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(1404942..1405244) Thioalkalimicrobium cyclicum ALM1 10720057 YP_004537473.1 CDS Thicy_1227 NC_015581.1 1405237 1406163 R PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: tkm:TK90_1003 Na+/H+ antiporter MnhB subunit-related protein; Na+/H+ antiporter MnhB subunit-like protein complement(1405237..1406163) Thioalkalimicrobium cyclicum ALM1 10720058 YP_004537474.1 CDS Thicy_1228 NC_015581.1 1406150 1406464 R PFAM: Na+/H+ antiporter subunit; KEGG: tgr:Tgr7_2667 putative monovalent cation/H+ antiporter subunit G; Na+/H+ antiporter subunit complement(1406150..1406464) Thioalkalimicrobium cyclicum ALM1 10720059 YP_004537475.1 CDS Thicy_1229 NC_015581.1 1406451 1406753 R PFAM: Multiple resistance and pH regulation protein F; KEGG: rpx:Rpdx1_3201 hypothetical protein; multiple resistance and pH regulation protein F complement(1406451..1406753) Thioalkalimicrobium cyclicum ALM1 10720060 YP_004537476.1 CDS Thicy_1230 NC_015581.1 1406750 1407247 R KEGG: tra:Trad_1678 multisubunit sodium/proton antiporter subunit MrpE; multisubunit sodium/proton antiporter subunit MrpE complement(1406750..1407247) Thioalkalimicrobium cyclicum ALM1 10720061 YP_004537477.1 CDS Thicy_1231 NC_015581.1 1407265 1408134 R PFAM: Protein of unknown function DUF519; KEGG: tcx:Tcr_1053 hypothetical protein; hypothetical protein complement(1407265..1408134) Thioalkalimicrobium cyclicum ALM1 10720062 YP_004537478.1 CDS Thicy_1232 NC_015581.1 1408273 1409841 D PFAM: Phosphate transporter; KEGG: tcx:Tcr_0543 phosphate transporter; phosphate transporter 1408273..1409841 Thioalkalimicrobium cyclicum ALM1 10720063 YP_004537479.1 CDS Thicy_1233 NC_015581.1 1410246 1411514 D KEGG: tcx:Tcr_1488 PfkB; PFAM: Carbohydrate/purine kinase; Rieske [2Fe-2S] iron-sulphur domain; Ketohexokinase 1410246..1411514 Thioalkalimicrobium cyclicum ALM1 10720064 YP_004537480.1 CDS Thicy_1234 NC_015581.1 1411523 1412254 R KEGG: tcx:Tcr_1489 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; TrmH family RNA methyltransferase complement(1411523..1412254) Thioalkalimicrobium cyclicum ALM1 10720065 YP_004537481.1 CDS Thicy_1235 NC_015581.1 1412244 1414607 R SMART: Cold shock protein; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; KEGG: tcx:Tcr_1490 ribonuclease R; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; ribonuclease R complement(1412244..1414607) Thioalkalimicrobium cyclicum ALM1 10720066 YP_004537482.1 CDS Thicy_1236 NC_015581.1 1414668 1416056 R KEGG: tcx:Tcr_1491 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; dihydrolipoyl dehydrogenase complement(1414668..1416056) Thioalkalimicrobium cyclicum ALM1 10720067 YP_004537483.1 CDS Thicy_1237 NC_015581.1 1416146 1417678 D KEGG: tcx:Tcr_1492 lytic transglycosylase, catalytic; PFAM: Lytic transglycosylase-like, catalytic; Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; lytic transglycosylase catalytic subunit 1416146..1417678 Thioalkalimicrobium cyclicum ALM1 10720068 YP_004537484.1 CDS Thicy_1238 NC_015581.1 1417760 1418734 D HAMAP: Fructose-1,6-bisphosphatase; KEGG: tcx:Tcr_1495 inositol phosphatase/fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 1417760..1418734 Thioalkalimicrobium cyclicum ALM1 10720069 YP_004537485.1 CDS Thicy_1239 NC_015581.1 1418823 1419347 D HAMAP: Inorganic pyrophosphatase; KEGG: tcx:Tcr_1496 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; inorganic pyrophosphatase 1418823..1419347 Thioalkalimicrobium cyclicum ALM1 10720070 YP_004537486.1 CDS Thicy_1240 NC_015581.1 1419476 1422283 D HAMAP: Phosphoenolpyruvate carboxylase; KEGG: tcx:Tcr_1521 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1419476..1422283 Thioalkalimicrobium cyclicum ALM1 10720071 YP_004537487.1 CDS Thicy_1241 NC_015581.1 1422381 1422767 D PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: tcx:Tcr_1522 aspartate alpha-decarboxylase; aspartate 1-decarboxylase 1422381..1422767 Thioalkalimicrobium cyclicum ALM1 10720072 YP_004537488.1 CDS Thicy_1242 NC_015581.1 1422774 1423646 R TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: tcx:Tcr_1525 pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase complement(1422774..1423646) Thioalkalimicrobium cyclicum ALM1 10720073 YP_004537489.1 CDS Thicy_1243 NC_015581.1 1423646 1424437 R PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: tcx:Tcr_1526 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1423646..1424437) Thioalkalimicrobium cyclicum ALM1 10720074 YP_004537490.1 CDS Thicy_1244 NC_015581.1 1424434 1424982 R TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: tcx:Tcr_1527 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1424434..1424982) Thioalkalimicrobium cyclicum ALM1 10720075 YP_004537491.1 CDS Thicy_1245 NC_015581.1 1424975 1426384 R TIGRFAM: Poly(A) polymerase, PcnB; KEGG: tcx:Tcr_1528 poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase complement(1424975..1426384) Thioalkalimicrobium cyclicum ALM1 10720076 YP_004537492.1 CDS Thicy_1246 NC_015581.1 1426533 1426949 D PFAM: Fe-S metabolism associated SufE; KEGG: tcx:Tcr_1625 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1426533..1426949 Thioalkalimicrobium cyclicum ALM1 10720077 YP_004537493.1 CDS Thicy_1247 NC_015581.1 1427038 1427937 R HAMAP: protease htpX; KEGG: tcx:Tcr_1626 heat shock protein HtpX; protease htpX complement(1427038..1427937) Thioalkalimicrobium cyclicum ALM1 10720078 YP_004537494.1 CDS Thicy_1248 NC_015581.1 1428038 1429471 R TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; KEGG: tcx:Tcr_1627 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B complement(1428038..1429471) Thioalkalimicrobium cyclicum ALM1 10720079 YP_004537495.1 CDS Thicy_1249 NC_015581.1 1429468 1430934 R PFAM: Amidase; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: tcx:Tcr_1628 glutamyl-tRNA(Gln) amidotransferase, A subunit; glutamyl-tRNA(Gln) amidotransferase subunit A complement(1429468..1430934) Thioalkalimicrobium cyclicum ALM1 10720080 YP_004537496.1 CDS Thicy_1250 NC_015581.1 1430964 1431251 R TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; KEGG: tcx:Tcr_1629 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C complement(1430964..1431251) Thioalkalimicrobium cyclicum ALM1 10720081 YP_004537497.1 CDS Thicy_1251 NC_015581.1 1431434 1432474 D KEGG: tcx:Tcr_1630 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 1431434..1432474 Thioalkalimicrobium cyclicum ALM1 10720082 YP_004537498.1 CDS Thicy_1252 NC_015581.1 1432592 1433341 D PFAM: Rod shape-determining protein MreC; KEGG: tcx:Tcr_1631 rod shape-determining protein MreC; Rod shape-determining protein MreC 1432592..1433341 Thioalkalimicrobium cyclicum ALM1 10720083 YP_004537499.1 CDS Thicy_1253 NC_015581.1 1433338 1433841 D TIGRFAM: Cell shape-determining protein MreD; KEGG: tcx:Tcr_1632 hypothetical protein; rod shape-determining protein MreD 1433338..1433841 Thioalkalimicrobium cyclicum ALM1 10720084 YP_004537500.1 CDS Thicy_1254 NC_015581.1 1433887 1435686 D TIGRFAM: Penicillin-binding protein 2; KEGG: tcx:Tcr_1633 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein 2 1433887..1435686 Thioalkalimicrobium cyclicum ALM1 10720085 YP_004537501.1 CDS Thicy_1255 NC_015581.1 1435683 1436837 D KEGG: tcx:Tcr_1634 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein; rod shape-determining protein RodA 1435683..1436837 Thioalkalimicrobium cyclicum ALM1 10720086 YP_004537502.1 CDS Thicy_1256 NC_015581.1 1436915 1438087 D KEGG: tcx:Tcr_1635 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; beta-lactamase 1436915..1438087 Thioalkalimicrobium cyclicum ALM1 10720087 YP_004537503.1 CDS Thicy_1257 NC_015581.1 1438087 1438986 D KEGG: tcx:Tcr_1636 aminotransferase, class IV; PFAM: Aminotransferase, class IV; D-amino-acid transaminase 1438087..1438986 Thioalkalimicrobium cyclicum ALM1 10720088 YP_004537504.1 CDS Thicy_1258 NC_015581.1 1438997 1439293 D KEGG: tcx:Tcr_1637 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493; hypothetical protein 1438997..1439293 Thioalkalimicrobium cyclicum ALM1 10720089 YP_004537505.1 CDS Thicy_1259 NC_015581.1 1439281 1439946 D KEGG: tcx:Tcr_1638 lipoate-protein ligase B; manually curated; TIGRFAM: Octanoyltransferase; PFAM: Biotin/lipoate A/B protein ligase; HAMAP: Octanoyltransferase; Octanoyltransferase 1439281..1439946 Thioalkalimicrobium cyclicum ALM1 10720090 YP_004537506.1 CDS Thicy_1260 NC_015581.1 1439974 1440963 D KEGG: tcx:Tcr_1639 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB; lipoyl synthase 1439974..1440963 Thioalkalimicrobium cyclicum ALM1 10720091 YP_004537507.1 CDS Thicy_1261 NC_015581.1 1440963 1441808 D PFAM: Heat shock protein Hsp33 protein; KEGG: tcx:Tcr_1649 HSP33 protein; Hsp33 protein 1440963..1441808 Thioalkalimicrobium cyclicum ALM1 10720092 YP_004537508.1 CDS Thicy_1262 NC_015581.1 1441829 1442605 R KEGG: tcx:Tcr_1650 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328; hypothetical protein complement(1441829..1442605) Thioalkalimicrobium cyclicum ALM1 10720093 YP_004537509.1 CDS Thicy_1263 NC_015581.1 1442609 1442875 R KEGG: tcx:Tcr_1651 hypothetical protein; hypothetical protein complement(1442609..1442875) Thioalkalimicrobium cyclicum ALM1 10720094 YP_004537510.1 CDS Thicy_1264 NC_015581.1 1442981 1443667 R PFAM: Nucleotidyl transferase; KEGG: tcx:Tcr_1652 nucleotidyl transferase; nucleotidyl transferase complement(1442981..1443667) Thioalkalimicrobium cyclicum ALM1 10720095 YP_004537511.1 CDS Thicy_1265 NC_015581.1 1443655 1444770 R PFAM: Aminoglycoside phosphotransferase; KEGG: tcx:Tcr_1653 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(1443655..1444770) Thioalkalimicrobium cyclicum ALM1 10720096 YP_004537512.1 CDS Thicy_1266 NC_015581.1 1444869 1447244 D PFAM: Organic solvent tolerance protein; KEGG: tcx:Tcr_1654 organic solvent tolerance protein; organic solvent tolerance protein 1444869..1447244 Thioalkalimicrobium cyclicum ALM1 10720097 YP_004537513.1 CDS Thicy_1267 NC_015581.1 1447255 1448235 D PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: tcx:Tcr_1655 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1447255..1448235 Thioalkalimicrobium cyclicum ALM1 10720098 YP_004537514.1 CDS Thicy_1268 NC_015581.1 1448244 1449245 D PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: pmr:PMI2333 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 1448244..1449245 Thioalkalimicrobium cyclicum ALM1 10720099 YP_004537515.1 CDS Thicy_1269 NC_015581.1 1449232 1450080 D SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: tcx:Tcr_1657 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; ribosomal RNA small subunit methyltransferase A 1449232..1450080 Thioalkalimicrobium cyclicum ALM1 10720100 YP_004537516.1 CDS Thicy_1270 NC_015581.1 1450085 1450936 D TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: tcx:Tcr_1658 diadenosine tetraphosphatase; PFAM: Metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1450085..1450936 Thioalkalimicrobium cyclicum ALM1 10720101 YP_004537517.1 CDS Thicy_1271 NC_015581.1 1451017 1451397 R KEGG: tkm:TK90_0540 hypothetical protein; hypothetical protein complement(1451017..1451397) Thioalkalimicrobium cyclicum ALM1 10720102 YP_004537518.1 CDS Thicy_1272 NC_015581.1 1451527 1451826 R PFAM: BolA-like protein; KEGG: tcx:Tcr_0548 BolA-like protein; BolA family protein complement(1451527..1451826) Thioalkalimicrobium cyclicum ALM1 10720103 YP_004537519.1 CDS Thicy_1273 NC_015581.1 1451922 1452173 D PFAM: Ferredoxin; KEGG: tcx:Tcr_0545 ferredoxin; ferredoxin 1451922..1452173 Thioalkalimicrobium cyclicum ALM1 10720104 YP_004537520.1 CDS Thicy_1277 NC_015581.1 1454437 1455843 D KEGG: tcx:Tcr_0536 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; type I glutamine synthetase 1454437..1455843 Thioalkalimicrobium cyclicum ALM1 10720108 YP_004537521.1 CDS Thicy_1278 NC_015581.1 1455980 1457512 R TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: tcx:Tcr_0477 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(1455980..1457512) Thioalkalimicrobium cyclicum ALM1 10720109 YP_004537522.1 CDS Thicy_1279 NC_015581.1 1457499 1458377 R PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: tcx:Tcr_0476 transporter-associated region; CBS domain-containing protein complement(1457499..1458377) Thioalkalimicrobium cyclicum ALM1 10720110 YP_004537523.1 CDS Thicy_1280 NC_015581.1 1458468 1458983 R TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: esa:ESA_02677 putative metalloprotease; PFAM: Uncharacterised protein family UPF0054; metalloprotease ybeY complement(1458468..1458983) Thioalkalimicrobium cyclicum ALM1 10720111 YP_004537524.1 CDS Thicy_1281 NC_015581.1 1459005 1459994 R PFAM: PhoH-like protein; KEGG: tcx:Tcr_0474 PhoH-like protein; PhoH family protein complement(1459005..1459994) Thioalkalimicrobium cyclicum ALM1 10720112 YP_004537525.1 CDS Thicy_1282 NC_015581.1 1460001 1461440 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; KEGG: tcx:Tcr_0473 tRNA-i(6)A37 modification enzyme MiaB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB complement(1460001..1461440) Thioalkalimicrobium cyclicum ALM1 10720113 YP_004537526.1 CDS Thicy_1283 NC_015581.1 1461532 1463943 R TIGRFAM: Phosphoenolpyruvate synthase; KEGG: tcx:Tcr_1186 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; phosphoenolpyruvate synthase complement(1461532..1463943) Thioalkalimicrobium cyclicum ALM1 10720114 YP_004537527.1 CDS Thicy_1284 NC_015581.1 1463964 1465184 R PFAM: Mechanosensitive ion channel MscS; KEGG: cts:Ctha_0865 mechanosensitive ion channel MscS; mechanosensitive ion channel MscS complement(1463964..1465184) Thioalkalimicrobium cyclicum ALM1 10720115 YP_004537528.1 CDS Thicy_1285 NC_015581.1 1465231 1465863 R PFAM: Protein of unknown function DUF45; KEGG: aac:Aaci_1763 protein of unknown function DUF45; hypothetical protein complement(1465231..1465863) Thioalkalimicrobium cyclicum ALM1 10720116 YP_004537529.1 CDS Thicy_1286 NC_015581.1 1465863 1466384 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_0784 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(1465863..1466384) Thioalkalimicrobium cyclicum ALM1 10720117 YP_004537530.1 CDS Thicy_1287 NC_015581.1 1466652 1466924 D KEGG: efa:EF1550 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; histone family protein DNA-binding protein 1466652..1466924 Thioalkalimicrobium cyclicum ALM1 10720118 YP_004537531.1 CDS Thicy_1288 NC_015581.1 1466982 1467449 R KEGG: ilo:IL0121 hypothetical protein; hypothetical protein complement(1466982..1467449) Thioalkalimicrobium cyclicum ALM1 10720119 YP_004537532.1 CDS Thicy_1289 NC_015581.1 1467446 1467928 R KEGG: apb:SAR116_0799 DNA photolyase light harvesting cofactor binding domain-containing protein; hypothetical protein complement(1467446..1467928) Thioalkalimicrobium cyclicum ALM1 10720120 YP_004537533.1 CDS Thicy_1290 NC_015581.1 1467928 1468761 R PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: apb:SAR116_0797 hypothetical protein; DNA photolyase FAD-binding protein complement(1467928..1468761) Thioalkalimicrobium cyclicum ALM1 10720121 YP_004537534.1 CDS Thicy_1291 NC_015581.1 1468761 1469264 R PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: rde:RD1_4107 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 complement(1468761..1469264) Thioalkalimicrobium cyclicum ALM1 10720122 YP_004537535.1 CDS Thicy_1292 NC_015581.1 1469286 1470065 R PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: mrd:Mrad2831_5782 short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD complement(1469286..1470065) Thioalkalimicrobium cyclicum ALM1 10720123 YP_004537536.1 CDS Thicy_1293 NC_015581.1 1470093 1470362 R TIGRFAM: Conserved hypothetical protein CHP03643; KEGG: ilo:IL2050 hypothetical protein; hypothetical protein complement(1470093..1470362) Thioalkalimicrobium cyclicum ALM1 10720124 YP_004537537.1 CDS Thicy_1294 NC_015581.1 1470507 1471844 D PFAM: ABC-1; KEGG: sfr:Sfri_0889 hypothetical protein; ABC transporter 1470507..1471844 Thioalkalimicrobium cyclicum ALM1 10720125 YP_004537538.1 CDS Thicy_1295 NC_015581.1 1471931 1472341 D hypothetical protein 1471931..1472341 Thioalkalimicrobium cyclicum ALM1 10720126 YP_004537539.1 CDS Thicy_1296 NC_015581.1 1472360 1473058 D TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: hel:HELO_4303 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1472360..1473058 Thioalkalimicrobium cyclicum ALM1 10720127 YP_004537540.1 CDS Thicy_1297 NC_015581.1 1473055 1473888 D TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: gau:GAU_3709 thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1473055..1473888 Thioalkalimicrobium cyclicum ALM1 10720128 YP_004537541.1 CDS Thicy_1298 NC_015581.1 1473958 1475208 D KEGG: tcx:Tcr_0627 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; phosphoglycerate dehydrogenase 1473958..1475208 Thioalkalimicrobium cyclicum ALM1 10720129 YP_004537542.1 CDS Thicy_1299 NC_015581.1 1475227 1478049 D KEGG: tcx:Tcr_0626 hypothetical protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; D-lactate dehydrogenase 1475227..1478049 Thioalkalimicrobium cyclicum ALM1 10720130 YP_004537543.1 CDS Thicy_1300 NC_015581.1 1478053 1478244 D KEGG: maq:Maqu_2212 hypothetical protein; hypothetical protein 1478053..1478244 Thioalkalimicrobium cyclicum ALM1 10720131 YP_004537544.1 CDS Thicy_1301 NC_015581.1 1478472 1480538 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_2064 TonB-dependent receptor; TonB-dependent receptor 1478472..1480538 Thioalkalimicrobium cyclicum ALM1 10720132 YP_004537545.1 CDS Thicy_1302 NC_015581.1 1480570 1480836 D KEGG: sun:SUN_0533 hypothetical protein; hypothetical protein 1480570..1480836 Thioalkalimicrobium cyclicum ALM1 10720133 YP_004537546.1 CDS Thicy_1303 NC_015581.1 1480868 1481503 D KEGG: tcx:Tcr_2066 nicotinamide mononucleotide transporter; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1480868..1481503 Thioalkalimicrobium cyclicum ALM1 10720134 YP_004537547.1 CDS Thicy_1304 NC_015581.1 1481500 1482369 R KEGG: tcx:Tcr_2067 hypothetical protein; hypothetical protein complement(1481500..1482369) Thioalkalimicrobium cyclicum ALM1 10720135 YP_004537548.1 CDS Thicy_1305 NC_015581.1 1482399 1482605 R KEGG: tcx:Tcr_0535 hypothetical protein; hypothetical protein complement(1482399..1482605) Thioalkalimicrobium cyclicum ALM1 10720136 YP_004537549.1 CDS Thicy_1306 NC_015581.1 1482624 1483553 R TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: tcx:Tcr_0534 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; branched-chain amino acid aminotransferase complement(1482624..1483553) Thioalkalimicrobium cyclicum ALM1 10720137 YP_004537550.1 CDS Thicy_1307 NC_015581.1 1483799 1484971 D PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: tcx:Tcr_0533 acetylornithine and succinylornithine aminotransferase; acetylornithine/succinyldiaminopimelate aminotransferase 1483799..1484971 Thioalkalimicrobium cyclicum ALM1 10720138 YP_004537551.1 CDS Thicy_1308 NC_015581.1 1484979 1485890 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: tcx:Tcr_0532 ornithine carbamoyltransferase; ornithine carbamoyltransferase 1484979..1485890 Thioalkalimicrobium cyclicum ALM1 10720139 YP_004537552.1 CDS Thicy_1309 NC_015581.1 1485887 1486489 R SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: hel:HELO_2057 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR; Recombination protein recR complement(1485887..1486489) Thioalkalimicrobium cyclicum ALM1 10720140 YP_004537553.1 CDS Thicy_1310 NC_015581.1 1486502 1486831 R TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: tcx:Tcr_0530 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; hypothetical protein complement(1486502..1486831) Thioalkalimicrobium cyclicum ALM1 10720141 YP_004537554.1 CDS Thicy_1311 NC_015581.1 1486857 1488755 R TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: tcx:Tcr_0529 DNA-directed DNA polymerase; SMART: ATPase, AAA+ type, core; DNA polymerase III subunits gamma and tau complement(1486857..1488755) Thioalkalimicrobium cyclicum ALM1 10720142 YP_004537555.1 CDS Thicy_1312 NC_015581.1 1489083 1491581 R KEGG: tcx:Tcr_0513 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase complement(1489083..1491581) Thioalkalimicrobium cyclicum ALM1 10720144 YP_004537556.1 CDS Thicy_1313 NC_015581.1 1491571 1493067 R PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: tcx:Tcr_0512 glycogen/starch synthase, ADP-glucose type; glycogen synthase complement(1491571..1493067) Thioalkalimicrobium cyclicum ALM1 10720145 YP_004537557.1 CDS Thicy_1314 NC_015581.1 1493073 1495265 R KEGG: tcx:Tcr_0511 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; 1,4-alpha-glucan-branching protein complement(1493073..1495265) Thioalkalimicrobium cyclicum ALM1 10720146 YP_004537558.1 CDS Thicy_1315 NC_015581.1 1495280 1496611 R TIGRFAM: Glycoside hydrolase, family 77; KEGG: tcx:Tcr_0510 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; 4-alpha-glucanotransferase complement(1495280..1496611) Thioalkalimicrobium cyclicum ALM1 10720147 YP_004537559.1 CDS Thicy_1316 NC_015581.1 1496661 1498385 R KEGG: tcx:Tcr_0509 glycoside hydrolase family protein; manually curated; PFAM: Glycoside hydrolase, family 57, core; glycoside hydrolase family protein complement(1496661..1498385) Thioalkalimicrobium cyclicum ALM1 10720148 YP_004537560.1 CDS Thicy_1317 NC_015581.1 1498410 1499675 R PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: tcx:Tcr_0508 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase complement(1498410..1499675) Thioalkalimicrobium cyclicum ALM1 10720149 YP_004537561.1 CDS Thicy_1318 NC_015581.1 1499712 1500722 R KEGG: tcx:Tcr_0507 glucokinase; PFAM: Glucokinase; glucokinase complement(1499712..1500722) Thioalkalimicrobium cyclicum ALM1 10720150 YP_004537562.1 CDS Thicy_1319 NC_015581.1 1500770 1501336 R PFAM: Sugar isomerase (SIS); KEGG: tcx:Tcr_0506 phosphoheptose isomerase; sugar isomerase complement(1500770..1501336) Thioalkalimicrobium cyclicum ALM1 10720151 YP_004537563.1 CDS Thicy_1320 NC_015581.1 1501329 1502753 R TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; HAMAP: Bifunctional protein hldE; KEGG: tcx:Tcr_0505 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase; Bifunctional protein hldE complement(1501329..1502753) Thioalkalimicrobium cyclicum ALM1 10720152 YP_004537564.1 CDS Thicy_1321 NC_015581.1 1502980 1503645 D PFAM: Lipid A 3-O-deacylase-related; KEGG: ppn:Palpr_1308 lipid a 3-O-deacylase-related protein; lipid A 3-O-deacylase-like protein 1502980..1503645 Thioalkalimicrobium cyclicum ALM1 10720153 YP_004537565.1 CDS Thicy_1322 NC_015581.1 1503692 1504636 D TIGRFAM: KpsF/GutQ; KEGG: tcx:Tcr_0503 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; KpsF/GutQ family protein 1503692..1504636 Thioalkalimicrobium cyclicum ALM1 10720154 YP_004537566.1 CDS Thicy_1323 NC_015581.1 1504620 1505981 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: tcx:Tcr_0502 three-deoxy-D-manno-octulosonic-acid transferase-like; tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1504620..1505981 Thioalkalimicrobium cyclicum ALM1 10720155 YP_004537567.1 CDS Thicy_1324 NC_015581.1 1506045 1506899 D KEGG: tcx:Tcr_0467 hypothetical protein; hypothetical protein 1506045..1506899 Thioalkalimicrobium cyclicum ALM1 10720156 YP_004537568.1 CDS Thicy_1325 NC_015581.1 1506893 1507825 D KEGG: tcx:Tcr_0468 methylation site; hypothetical protein 1506893..1507825 Thioalkalimicrobium cyclicum ALM1 10720157 YP_004537569.1 CDS Thicy_1326 NC_015581.1 1507788 1508522 D KEGG: sde:Sde_1351 hypothetical protein; hypothetical protein 1507788..1508522 Thioalkalimicrobium cyclicum ALM1 10720158 YP_004537570.1 CDS Thicy_1327 NC_015581.1 1508511 1510202 R PFAM: L-lactate permease; KEGG: afl:Aflv_0347 L-lactate permease; L-lactate permease complement(1508511..1510202) Thioalkalimicrobium cyclicum ALM1 10720159 YP_004537571.1 CDS Thicy_1328 NC_015581.1 1510337 1510837 D TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: tcx:Tcr_1819 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1510337..1510837 Thioalkalimicrobium cyclicum ALM1 10720160 YP_004537572.1 CDS Thicy_1329 NC_015581.1 1510842 1511957 D TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: tcx:Tcr_1818 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; phosphoribosylaminoimidazole carboxylase ATPase subunit 1510842..1511957 Thioalkalimicrobium cyclicum ALM1 10720161 YP_004537573.1 CDS Thicy_1330 NC_015581.1 1511973 1512527 R PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcx:Tcr_0234 hypothetical protein; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(1511973..1512527) Thioalkalimicrobium cyclicum ALM1 10720162 YP_004537574.1 CDS Thicy_1331 NC_015581.1 1512562 1513530 R PFAM: Protein of unknown function DUF389; KEGG: dak:DaAHT2_2330 hypothetical protein; hypothetical protein complement(1512562..1513530) Thioalkalimicrobium cyclicum ALM1 10720163 YP_004537575.1 CDS Thicy_1332 NC_015581.1 1513947 1515104 D PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: tcx:Tcr_1821 S-adenosylmethionine synthetase; S-adenosylmethionine synthase 1513947..1515104 Thioalkalimicrobium cyclicum ALM1 10720164 YP_004537576.1 CDS Thicy_1333 NC_015581.1 1515239 1516108 D TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: tcx:Tcr_1822 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1515239..1516108 Thioalkalimicrobium cyclicum ALM1 10720165 YP_004537577.1 CDS Thicy_1334 NC_015581.1 1516124 1516864 D KEGG: tcx:Tcr_1823 hypothetical protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E; Ribosomal RNA small subunit methyltransferase E 1516124..1516864 Thioalkalimicrobium cyclicum ALM1 10720166 YP_004537578.1 CDS Thicy_1335 NC_015581.1 1516875 1517423 R PFAM: Invasion associated locus B; KEGG: tkm:TK90_1007 invasion associated locus B family protein; invasion associated locus B family protein complement(1516875..1517423) Thioalkalimicrobium cyclicum ALM1 10720167 YP_004537579.1 CDS Thicy_1336 NC_015581.1 1517480 1518163 R KEGG: bja:blr4802 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family complement(1517480..1518163) Thioalkalimicrobium cyclicum ALM1 10720168 YP_004537580.1 CDS Thicy_1337 NC_015581.1 1518179 1520185 D KEGG: azl:AZL_002740 two-component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 1518179..1520185 Thioalkalimicrobium cyclicum ALM1 10720169 YP_004537581.1 CDS Thicy_1338 NC_015581.1 1520231 1521526 D KEGG: tcx:Tcr_1824 glutamate--cysteine ligase GshA; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA; glutamate/cysteine ligase 1520231..1521526 Thioalkalimicrobium cyclicum ALM1 10720170 YP_004537582.1 CDS Thicy_1339 NC_015581.1 1521523 1522383 R KEGG: tcx:Tcr_1772 ribonuclease BN, putative; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related; ribonuclease BN complement(1521523..1522383) Thioalkalimicrobium cyclicum ALM1 10720171 YP_004537583.1 CDS Thicy_1340 NC_015581.1 1522401 1523708 R TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: tcx:Tcr_1781 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; carboxyl-terminal protease complement(1522401..1523708) Thioalkalimicrobium cyclicum ALM1 10720172 YP_004537584.1 CDS Thicy_1341 NC_015581.1 1523827 1524138 D KEGG: tcx:Tcr_1782 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; regulatory protein ArsR 1523827..1524138 Thioalkalimicrobium cyclicum ALM1 10720173 YP_004537585.1 CDS Thicy_1342 NC_015581.1 1524230 1525339 R PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: tcx:Tcr_0568 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(1524230..1525339) Thioalkalimicrobium cyclicum ALM1 10720175 YP_004537586.1 CDS Thicy_1343 NC_015581.1 1525348 1526514 R KEGG: tcx:Tcr_0567 cell cycle protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; cell division protein FtsW complement(1525348..1526514) Thioalkalimicrobium cyclicum ALM1 10720176 YP_004537587.1 CDS Thicy_1344 NC_015581.1 1526507 1527853 R TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: tcx:Tcr_0566 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1526507..1527853) Thioalkalimicrobium cyclicum ALM1 10720177 YP_004537588.1 CDS Thicy_1345 NC_015581.1 1527857 1528939 R TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: tcx:Tcr_0565 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1527857..1528939) Thioalkalimicrobium cyclicum ALM1 10720178 YP_004537589.1 CDS Thicy_1346 NC_015581.1 1528923 1530380 R TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: tcx:Tcr_0564 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(1528923..1530380) Thioalkalimicrobium cyclicum ALM1 10720179 YP_004537590.1 CDS Thicy_1347 NC_015581.1 1530377 1531969 R PFAM: Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: tgr:Tgr7_0764 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1530377..1531969) Thioalkalimicrobium cyclicum ALM1 10720180 YP_004537591.1 CDS Thicy_1348 NC_015581.1 1531966 1533633 R KEGG: tcx:Tcr_0562 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase complement(1531966..1533633) Thioalkalimicrobium cyclicum ALM1 10720181 YP_004537592.1 CDS Thicy_1349 NC_015581.1 1533630 1533947 R PFAM: Cell division protein FtsL; KEGG: tcx:Tcr_0561 cell division protein, FtsL -like; cell division protein FtsL complement(1533630..1533947) Thioalkalimicrobium cyclicum ALM1 10720182 YP_004537593.1 CDS Thicy_1350 NC_015581.1 1533968 1535218 R KEGG: tcx:Tcr_0560 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ complement(1533968..1535218) Thioalkalimicrobium cyclicum ALM1 10720183 YP_004537594.1 CDS Thicy_1351 NC_015581.1 1535265 1536194 R TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: tcx:Tcr_0559 methyltransferase; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; Ribosomal RNA small subunit methyltransferase H complement(1535265..1536194) Thioalkalimicrobium cyclicum ALM1 10720184 YP_004537595.1 CDS Thicy_1352 NC_015581.1 1536191 1536649 R TIGRFAM: MraZ; HAMAP: MraZ; KEGG: tcx:Tcr_0558 hypothetical protein; PFAM: MraZ domain; protein mraZ complement(1536191..1536649) Thioalkalimicrobium cyclicum ALM1 10720185 YP_004537596.1 CDS Thicy_1353 NC_015581.1 1537420 1538274 R TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: tcx:Tcr_1693 hypothetical protein; PFAM: Tetrapyrrole methylase; Ribosomal RNA small subunit methyltransferase I complement(1537420..1538274) Thioalkalimicrobium cyclicum ALM1 10720187 YP_004537597.1 CDS Thicy_1354 NC_015581.1 1538333 1539907 D KEGG: tcx:Tcr_1694 putative lipoprotein-like; hypothetical protein 1538333..1539907 Thioalkalimicrobium cyclicum ALM1 10720188 YP_004537598.1 CDS Thicy_1355 NC_015581.1 1539918 1540307 D TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: vcj:VCD_001028 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 1539918..1540307 Thioalkalimicrobium cyclicum ALM1 10720189 YP_004537599.1 CDS Thicy_1356 NC_015581.1 1540359 1540829 D PFAM: Ferritin/Dps protein; KEGG: amr:AM1_5202 ferritin and Dps; ferritin Dps family protein 1540359..1540829 Thioalkalimicrobium cyclicum ALM1 10720190 YP_004537600.1 CDS Thicy_1357 NC_015581.1 1541046 1542833 R KEGG: tcx:Tcr_1806 sigma 70 (RpoD); TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 subunit RpoD complement(1541046..1542833) Thioalkalimicrobium cyclicum ALM1 10720192 YP_004537601.1 CDS Thicy_1358 NC_015581.1 1542988 1544790 R KEGG: tcx:Tcr_1807 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase complement(1542988..1544790) Thioalkalimicrobium cyclicum ALM1 10720193 YP_004537602.1 CDS Thicy_1359 NC_015581.1 1544866 1545309 R KEGG: tcx:Tcr_1808 hypothetical protein; hypothetical protein complement(1544866..1545309) Thioalkalimicrobium cyclicum ALM1 10720194 YP_004537603.1 CDS Thicy_1360 NC_015581.1 1545312 1545530 R TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; PFAM: Ribosomal protein S21; 30S ribosomal protein S21 complement(1545312..1545530) Thioalkalimicrobium cyclicum ALM1 10720195 YP_004537604.1 CDS Thicy_1361 NC_015581.1 1545722 1546783 D PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: tcx:Tcr_1810 glycoprotease family metalloendopeptidase; O-sialoglycoprotein endopeptidase 1545722..1546783 Thioalkalimicrobium cyclicum ALM1 10720196 YP_004537605.1 CDS Thicy_1362 NC_015581.1 1546767 1547354 R TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: tcx:Tcr_1811 hypothetical protein; PFAM: Protein of unknown function DUF205; glycerol-3-phosphate acyltransferase complement(1546767..1547354) Thioalkalimicrobium cyclicum ALM1 10720197 YP_004537606.1 CDS Thicy_1363 NC_015581.1 1547433 1547813 D KEGG: tkm:TK90_0193 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; Dihydroneopterin aldolase subgroup; PFAM: Dihydroneopterin aldolase; dihydroneopterin aldolase 1547433..1547813 Thioalkalimicrobium cyclicum ALM1 10720198 YP_004537607.1 CDS Thicy_1364 NC_015581.1 1547828 1549003 D PFAM: Protein of unknown function DUF185; KEGG: tcx:Tcr_1815 hypothetical protein; hypothetical protein 1547828..1549003 Thioalkalimicrobium cyclicum ALM1 10720199 YP_004537608.1 CDS Thicy_1365 NC_015581.1 1549058 1549825 D TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: tcx:Tcr_1816 undecaprenol kinase, putative; PFAM: Bacitracin resistance protein BacA; UDP-diphosphatase 1549058..1549825 Thioalkalimicrobium cyclicum ALM1 10720200 YP_004537609.1 CDS Thicy_1367 NC_015581.1 1550164 1551555 D TIGRFAM: Divalent cation transporter; PFAM: MgtE integral membrane region; Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; KEGG: hha:Hhal_0714 magnesium transporter; SMART: Cystathionine beta-synthase, core; magnesium transporter 1550164..1551555 Thioalkalimicrobium cyclicum ALM1 10720202 YP_004537610.1 CDS Thicy_1368 NC_015581.1 1552355 1552693 D KEGG: pay:PAU_01543 hypothetical protein; hypothetical protein 1552355..1552693 Thioalkalimicrobium cyclicum ALM1 10720204 YP_004537611.1 CDS Thicy_1369 NC_015581.1 1552715 1553170 D KEGG: vfm:VFMJ11_1538 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1552715..1553170 Thioalkalimicrobium cyclicum ALM1 10720205 YP_004537612.1 CDS Thicy_1370 NC_015581.1 1553222 1555669 R PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: pin:Ping_0150 type III restriction enzyme, res subunit; SMART: DEAD-like helicase, N-terminal; type I site-specific deoxyribonuclease complement(1553222..1555669) Thioalkalimicrobium cyclicum ALM1 10720206 YP_004537613.1 CDS Thicy_1371 NC_015581.1 1555688 1556593 R PFAM: Abortive infection bacteriophage resistance related; KEGG: cch:Cag_1061 phage AbiD protein; Abi family protein complement(1555688..1556593) Thioalkalimicrobium cyclicum ALM1 10720207 YP_004537614.1 CDS Thicy_1372 NC_015581.1 1556586 1556807 R hypothetical protein complement(1556586..1556807) Thioalkalimicrobium cyclicum ALM1 10720208 YP_004537615.1 CDS Thicy_1373 NC_015581.1 1556804 1558003 R PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ant:Arnit_1477 restriction modification system DNA specificity domain-containing protein; restriction modification system DNA specificity domain-containing protein complement(1556804..1558003) Thioalkalimicrobium cyclicum ALM1 10720209 YP_004537616.1 CDS Thicy_1374 NC_015581.1 1558000 1559457 R PFAM: DNA methylase, adenine-specific; KEGG: vfm:VFMJ11_2143 type I restriction-modification system, M subunit; N-6 DNA methylase complement(1558000..1559457) Thioalkalimicrobium cyclicum ALM1 10720210 YP_004537617.1 CDS Thicy_1375 NC_015581.1 1559816 1560907 R KEGG: tcx:Tcr_0395 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; GTP-binding protein YchF complement(1559816..1560907) Thioalkalimicrobium cyclicum ALM1 10720212 YP_004537618.1 CDS Thicy_1376 NC_015581.1 1560937 1561524 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: tcx:Tcr_0394 peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(1560937..1561524) Thioalkalimicrobium cyclicum ALM1 10720213 YP_004537619.1 CDS Thicy_1377 NC_015581.1 1561569 1562150 R TIGRFAM: Ribosomal protein L25; HAMAP: Ribosomal protein L25; KEGG: tcx:Tcr_0393 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25, N-terminal; 50S ribosomal protein L25 complement(1561569..1562150) Thioalkalimicrobium cyclicum ALM1 10720214 YP_004537620.1 CDS Thicy_1378 NC_015581.1 1562346 1563311 R TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: tcx:Tcr_0392 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(1562346..1563311) Thioalkalimicrobium cyclicum ALM1 10720215 YP_004537621.1 CDS Thicy_1379 NC_015581.1 1563622 1563885 R TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: tcx:Tcr_0492 ribosomal protein S20; PFAM: Ribosomal protein S20; 30S ribosomal protein S20 complement(1563622..1563885) Thioalkalimicrobium cyclicum ALM1 10720217 YP_004537622.1 CDS Thicy_1380 NC_015581.1 1564037 1564507 R TIGRFAM: Conserved hypothetical protein CHP00246; HAMAP: Ribosomal RNA large subunit methyltransferase H; KEGG: tcx:Tcr_0486 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; ribosomal RNA large subunit methyltransferase H complement(1564037..1564507) Thioalkalimicrobium cyclicum ALM1 10720218 YP_004537623.1 CDS Thicy_1381 NC_015581.1 1564510 1564872 R KEGG: tcx:Tcr_0485 iojap-related protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein; iojap family protein complement(1564510..1564872) Thioalkalimicrobium cyclicum ALM1 10720219 YP_004537624.1 CDS Thicy_1382 NC_015581.1 1564850 1565548 R PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: tcx:Tcr_0484 putative nicotinate-nucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase complement(1564850..1565548) Thioalkalimicrobium cyclicum ALM1 10720220 YP_004537625.1 CDS Thicy_1383 NC_015581.1 1565678 1566931 R TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: tcx:Tcr_0482 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(1565678..1566931) Thioalkalimicrobium cyclicum ALM1 10720221 YP_004537626.1 CDS Thicy_1385 NC_015581.1 1567668 1568282 R KEGG: hse:Hsero_3094 hypothetical protein; hypothetical protein complement(1567668..1568282) Thioalkalimicrobium cyclicum ALM1 10720223 YP_004537627.1 CDS Thicy_1386 NC_015581.1 1568406 1568654 D KEGG: vpa:VP1073 putative immunity repressor protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 1568406..1568654 Thioalkalimicrobium cyclicum ALM1 10720224 YP_004537628.1 CDS Thicy_1387 NC_015581.1 1568651 1569649 R KEGG: tcx:Tcr_0481 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta complement(1568651..1569649) Thioalkalimicrobium cyclicum ALM1 10720225 YP_004537629.1 CDS Thicy_1388 NC_015581.1 1569649 1570212 R KEGG: tcx:Tcr_0480 hypothetical protein; hypothetical protein complement(1569649..1570212) Thioalkalimicrobium cyclicum ALM1 10720226 YP_004537630.1 CDS Thicy_1389 NC_015581.1 1570212 1572707 R TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: tcx:Tcr_0479 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(1570212..1572707) Thioalkalimicrobium cyclicum ALM1 10720227 YP_004537631.1 CDS Thicy_1390 NC_015581.1 1572802 1573185 D KEGG: tcx:Tcr_0478 hypothetical protein; hypothetical protein 1572802..1573185 Thioalkalimicrobium cyclicum ALM1 10720228 YP_004537632.1 CDS Thicy_1391 NC_015581.1 1573290 1574906 D PFAM: Alpha/beta hydrolase fold-1; KEGG: tkm:TK90_2419 hypothetical protein; alpha/beta hydrolase fold protein 1573290..1574906 Thioalkalimicrobium cyclicum ALM1 10720229 YP_004537633.1 CDS Thicy_1392 NC_015581.1 1574907 1577663 R HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: tcx:Tcr_1497 glutamate-ammonia-ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; glutamate-ammonia-ligase adenylyltransferase complement(1574907..1577663) Thioalkalimicrobium cyclicum ALM1 10720230 YP_004537634.1 CDS Thicy_1393 NC_015581.1 1578062 1578400 D PFAM: Nitrogen regulatory protein PII; KEGG: tcx:Tcr_1499 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 1578062..1578400 Thioalkalimicrobium cyclicum ALM1 10720231 YP_004537635.1 CDS Thicy_1394 NC_015581.1 1578435 1579676 D KEGG: tcx:Tcr_1500 ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; PFAM: Ammonium transporter; putative ammonium transporter 1578435..1579676 Thioalkalimicrobium cyclicum ALM1 10720232 YP_004537636.1 CDS Thicy_1395 NC_015581.1 1579751 1580179 R KEGG: tcx:Tcr_1501 hypothetical protein; hypothetical protein complement(1579751..1580179) Thioalkalimicrobium cyclicum ALM1 10720233 YP_004537637.1 CDS Thicy_1396 NC_015581.1 1580293 1580940 D SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: tcx:Tcr_0041 2OG-Fe(II) oxygenase; prolyl 4-hydroxylase subunit alpha 1580293..1580940 Thioalkalimicrobium cyclicum ALM1 10720234 YP_004537638.1 CDS Thicy_1397 NC_015581.1 1581048 1583816 D TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: tcx:Tcr_1503 valyl-tRNA synthetase; valyl-tRNA synthetase 1581048..1583816 Thioalkalimicrobium cyclicum ALM1 10720235 YP_004537639.1 CDS Thicy_1398 NC_015581.1 1583794 1584504 D KEGG: tcx:Tcr_1504 SH3-like region; SH3 domain-containing protein 1583794..1584504 Thioalkalimicrobium cyclicum ALM1 10720236 YP_004537640.1 CDS Thicy_1399 NC_015581.1 1584594 1585316 R PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: tcx:Tcr_0652 thiol:disulfide interchange protein DsbC; disulfide bond isomerase DsbC/G complement(1584594..1585316) Thioalkalimicrobium cyclicum ALM1 10720237 YP_004537641.1 CDS Thicy_1400 NC_015581.1 1585337 1586239 R KEGG: tcx:Tcr_0651 tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; tyrosine recombinase xerC complement(1585337..1586239) Thioalkalimicrobium cyclicum ALM1 10720238 YP_004537642.1 CDS Thicy_1401 NC_015581.1 1586389 1589739 R PFAM: Acriflavin resistance protein; KEGG: tcx:Tcr_0455 acriflavin resistance protein; acriflavin resistance protein complement(1586389..1589739) Thioalkalimicrobium cyclicum ALM1 10720239 YP_004537643.1 CDS Thicy_1402 NC_015581.1 1589739 1590839 R KEGG: tcx:Tcr_0454 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1589739..1590839) Thioalkalimicrobium cyclicum ALM1 10720240 YP_004537644.1 CDS Thicy_1403 NC_015581.1 1590840 1592225 R PFAM: Outer membrane efflux protein; KEGG: tcx:Tcr_0453 outer membrane efflux protein; outer membrane efflux protein complement(1590840..1592225) Thioalkalimicrobium cyclicum ALM1 10720241 YP_004537645.1 CDS Thicy_1404 NC_015581.1 1592335 1592970 R KEGG: tcx:Tcr_0452 hypothetical protein; hypothetical protein complement(1592335..1592970) Thioalkalimicrobium cyclicum ALM1 10720242 YP_004537646.1 CDS Thicy_1405 NC_015581.1 1593025 1594161 D HAMAP: Erythronate-4-phosphate dehydrogenase; KEGG: tcx:Tcr_0451 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Erythronate-4-phosphate dehydrogenase 1593025..1594161 Thioalkalimicrobium cyclicum ALM1 10720243 YP_004537647.1 CDS Thicy_1406 NC_015581.1 1594340 1594912 D PFAM: Protein of unknown function DUF302; KEGG: tcx:Tcr_0450 hypothetical protein; hypothetical protein 1594340..1594912 Thioalkalimicrobium cyclicum ALM1 10720244 YP_004537648.1 CDS Thicy_1407 NC_015581.1 1595214 1596473 D PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: tcx:Tcr_0449 aromatic hydrocarbon degradation protein; aromatic hydrocarbon degradation membrane protein 1595214..1596473 Thioalkalimicrobium cyclicum ALM1 10720245 YP_004537649.1 CDS Thicy_1408 NC_015581.1 1596693 1597514 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: tcx:Tcr_0448 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1596693..1597514 Thioalkalimicrobium cyclicum ALM1 10720246 YP_004537650.1 CDS Thicy_1409 NC_015581.1 1597547 1598605 D KEGG: tcx:Tcr_1717 hydroxymethylglutaryl-CoA reductase (NADPH); PFAM: Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic; Hydroxymethylglutaryl-CoA reductase 1597547..1598605 Thioalkalimicrobium cyclicum ALM1 10720247 YP_004537651.1 CDS Thicy_1410 NC_015581.1 1598606 1599643 D TIGRFAM: Isopentenyl-diphosphate delta-isomerase, FMN-dependent; HAMAP: Isopentenyl-diphosphate delta-isomerase; KEGG: tcx:Tcr_1718 isopentenyl pyrophosphate isomerase; isopentenyl-diphosphate delta-isomerase 1598606..1599643 Thioalkalimicrobium cyclicum ALM1 10720248 YP_004537652.1 CDS Thicy_1411 NC_015581.1 1599664 1600842 D TIGRFAM: Hydroxymethylglutaryl-CoA synthase, prokaryotic; KEGG: tcx:Tcr_1719 hydroxymethylglutaryl-coenzyme A synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal; Hydroxymethylglutaryl-coenzyme A synthase C-terminal; hydroxymethylglutaryl-CoA synthase 1599664..1600842 Thioalkalimicrobium cyclicum ALM1 10720249 YP_004537653.1 CDS Thicy_1412 NC_015581.1 1600844 1601887 D PFAM: GHMP kinase; KEGG: tcx:Tcr_1732 GHMP kinase; GHMP kinase 1600844..1601887 Thioalkalimicrobium cyclicum ALM1 10720250 YP_004537654.1 CDS Thicy_1413 NC_015581.1 1601884 1602900 D PFAM: GHMP kinase; KEGG: tcx:Tcr_1733 GHMP kinase; GHMP kinase 1601884..1602900 Thioalkalimicrobium cyclicum ALM1 10720251 YP_004537655.1 CDS Thicy_1414 NC_015581.1 1602936 1603979 D TIGRFAM: Diphosphomevalonate decarboxylase; KEGG: tcx:Tcr_1734 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; diphosphomevalonate decarboxylase 1602936..1603979 Thioalkalimicrobium cyclicum ALM1 10720252 YP_004537656.1 CDS Thicy_1415 NC_015581.1 1603987 1604403 R PFAM: Stringent starvation protein B; KEGG: tcx:Tcr_1738 ClpXP protease specificity-enhancing factor; stringent starvation protein B complement(1603987..1604403) Thioalkalimicrobium cyclicum ALM1 10720253 YP_004537657.1 CDS Thicy_1416 NC_015581.1 1604422 1605057 R PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: tcx:Tcr_1739 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(1604422..1605057) Thioalkalimicrobium cyclicum ALM1 10720254 YP_004537658.1 CDS Thicy_1417 NC_015581.1 1605241 1605591 R PFAM: GtrA-like protein; KEGG: esc:Entcl_1658 GtrA family protein; GtrA family protein complement(1605241..1605591) Thioalkalimicrobium cyclicum ALM1 10720255 YP_004537659.1 CDS Thicy_1418 NC_015581.1 1605595 1606602 R PFAM: Glycosyl transferase, family 2; KEGG: sua:Saut_1555 glycosyl transferase family 2; family 2 glycosyl transferase complement(1605595..1606602) Thioalkalimicrobium cyclicum ALM1 10720256 YP_004537660.1 CDS Thicy_1419 NC_015581.1 1606605 1608203 R PFAM: Glycosyl transferase, family 39; KEGG: alv:Alvin_1542 glycosyl transferase family 39; glycosyl transferase family protein complement(1606605..1608203) Thioalkalimicrobium cyclicum ALM1 10720257 YP_004537661.1 CDS Thicy_1422 NC_015581.1 1609397 1609789 R KEGG: tcx:Tcr_1660 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; regulatory protein MerR complement(1609397..1609789) Thioalkalimicrobium cyclicum ALM1 10720260 YP_004537662.1 CDS Thicy_1423 NC_015581.1 1609804 1610097 R SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: tcx:Tcr_1661 integration host factor, alpha subunit; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; Integration host factor subunit alpha complement(1609804..1610097) Thioalkalimicrobium cyclicum ALM1 10720261 YP_004537663.1 CDS Thicy_1424 NC_015581.1 1610107 1612482 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: tcx:Tcr_1662 phenylalanyl-tRNA synthetase, beta subunit; Phenylalanyl-tRNA synthetase subunit beta complement(1610107..1612482) Thioalkalimicrobium cyclicum ALM1 10720262 YP_004537664.1 CDS Thicy_1425 NC_015581.1 1612510 1613508 R TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: tcx:Tcr_1663 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; Phenylalanyl-tRNA synthetase subunit alpha complement(1612510..1613508) Thioalkalimicrobium cyclicum ALM1 10720263 YP_004537665.1 CDS Thicy_1426 NC_015581.1 1613663 1614019 R TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: tcx:Tcr_1664 50S ribosomal protein L20; PFAM: Ribosomal protein L20; 50S ribosomal protein L20 complement(1613663..1614019) Thioalkalimicrobium cyclicum ALM1 10720264 YP_004537666.1 CDS Thicy_1427 NC_015581.1 1614035 1614232 R TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: tcx:Tcr_1665 50S ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(1614035..1614232) Thioalkalimicrobium cyclicum ALM1 10720265 YP_004537667.1 CDS Thicy_1428 NC_015581.1 1614393 1614866 R TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3; KEGG: slt:Slit_1736 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; translation initiation factor IF-3 complement(1614393..1614866) Thioalkalimicrobium cyclicum ALM1 10720266 YP_004537668.1 CDS Thicy_1429 NC_015581.1 1614971 1616908 R KEGG: tcx:Tcr_1667 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; threonyl-tRNA synthetase complement(1614971..1616908) Thioalkalimicrobium cyclicum ALM1 10720267 YP_004537669.1 CDS Thicy_1430 NC_015581.1 1617089 1617739 D KEGG: tcx:Tcr_1671 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1617089..1617739 Thioalkalimicrobium cyclicum ALM1 10720268 YP_004537670.1 CDS Thicy_1431 NC_015581.1 1617961 1619067 R PFAM: Permease YjgP/YjgQ, predicted; KEGG: tcx:Tcr_1746 permease YjgP/YjgQ; YjgP/YjgQ family permease complement(1617961..1619067) Thioalkalimicrobium cyclicum ALM1 10720269 YP_004537671.1 CDS Thicy_1432 NC_015581.1 1619064 1620131 R PFAM: Permease YjgP/YjgQ, predicted; KEGG: tcx:Tcr_1747 permease YjgP/YjgQ; YjgP/YjgQ family permease complement(1619064..1620131) Thioalkalimicrobium cyclicum ALM1 10720270 YP_004537672.1 CDS Thicy_1433 NC_015581.1 1620237 1621712 D HAMAP: cytosol aminopeptidase; KEGG: tcx:Tcr_1748 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal; cytosol aminopeptidase 1620237..1621712 Thioalkalimicrobium cyclicum ALM1 10720271 YP_004537673.1 CDS Thicy_1434 NC_015581.1 1621723 1622160 D KEGG: tcx:Tcr_1749 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit, HolC 1621723..1622160 Thioalkalimicrobium cyclicum ALM1 10720272 YP_004537674.1 CDS Thicy_1435 NC_015581.1 1622161 1622805 R KEGG: gca:Galf_2321 two component transcriptional regulator, fis family; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; Fis family two component transcriptional regulator complement(1622161..1622805) Thioalkalimicrobium cyclicum ALM1 10720273 YP_004537675.1 CDS Thicy_1436 NC_015581.1 1622917 1624956 R SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: tcx:Tcr_1754 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; UvrB/UvrC protein; UvrABC system protein B complement(1622917..1624956) Thioalkalimicrobium cyclicum ALM1 10720274 YP_004537676.1 CDS Thicy_1437 NC_015581.1 1625095 1626279 D KEGG: tcx:Tcr_1755 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; aspartate transaminase 1625095..1626279 Thioalkalimicrobium cyclicum ALM1 10720275 YP_004537677.1 CDS Thicy_1438 NC_015581.1 1626596 1627384 D KEGG: hypothetical protein; hypothetical protein 1626596..1627384 Thioalkalimicrobium cyclicum ALM1 10720277 YP_004537678.1 CDS Thicy_1439 NC_015581.1 1627385 1628656 D KEGG: tcx:Tcr_2194 RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: Deoxyribonuclease/rho motif-related TRAM; Methyltransferase small; TrmA family RNA methyltransferase 1627385..1628656 Thioalkalimicrobium cyclicum ALM1 10720279 YP_004537679.1 CDS Thicy_1440 NC_015581.1 1628686 1631862 R PFAM: Acriflavin resistance protein; KEGG: alv:Alvin_2517 acriflavin resistance protein; acriflavin resistance protein complement(1628686..1631862) Thioalkalimicrobium cyclicum ALM1 10720280 YP_004537680.1 CDS Thicy_1441 NC_015581.1 1631871 1632935 R KEGG: sse:Ssed_2428 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1631871..1632935) Thioalkalimicrobium cyclicum ALM1 10720281 YP_004537681.1 CDS Thicy_1442 NC_015581.1 1633129 1634247 D PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: tcx:Tcr_1864 ferrochelatase; ferrochelatase 1633129..1634247 Thioalkalimicrobium cyclicum ALM1 10720282 YP_004537682.1 CDS Thicy_1443 NC_015581.1 1634291 1636525 R TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: tcx:Tcr_1987 primosomal protein N' (replication factor Y); SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; primosomal protein N' complement(1634291..1636525) Thioalkalimicrobium cyclicum ALM1 10720283 YP_004537683.1 CDS Thicy_1444 NC_015581.1 1636621 1638333 R PFAM: Polypeptide-transport-associated, ShlB-type; Bacterial surface antigen (D15); KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type complement(1636621..1638333) Thioalkalimicrobium cyclicum ALM1 10720284 YP_004537684.1 CDS Thicy_1445 NC_015581.1 1638358 1668180 R KEGG: dal:Dalk_0372 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; filamentous hemagglutinin family outer membrane protein complement(1638358..1668180) Thioalkalimicrobium cyclicum ALM1 10720285 YP_004537685.1 CDS Thicy_1446 NC_015581.1 1668604 1669596 R KEGG: swi:Swit_0970 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1668604..1669596) Thioalkalimicrobium cyclicum ALM1 10720286 YP_004537686.1 CDS Thicy_1447 NC_015581.1 1669782 1670303 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: tcx:Tcr_2006 tripartite ATP-independent periplasmic transporter DctQ; tripartite AtP-independent periplasmic transporter subunit DctQ 1669782..1670303 Thioalkalimicrobium cyclicum ALM1 10720287 YP_004537687.1 CDS Thicy_1448 NC_015581.1 1670305 1671690 D KEGG: tcx:Tcr_2007 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 1670305..1671690 Thioalkalimicrobium cyclicum ALM1 10720288 YP_004537688.1 CDS Thicy_1449 NC_015581.1 1671727 1672626 R PFAM: Protein of unknown function DUF6, transmembrane; KEGG: rba:RB4923 putative permease; hypothetical protein complement(1671727..1672626) Thioalkalimicrobium cyclicum ALM1 10720289 YP_004537689.1 CDS Thicy_1450 NC_015581.1 1672789 1675038 D KEGG: alv:Alvin_2061 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal; lysine decarboxylase 1672789..1675038 Thioalkalimicrobium cyclicum ALM1 10720290 YP_004537690.1 CDS Thicy_1451 NC_015581.1 1675083 1676570 D KEGG: tcx:Tcr_0968 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; integral membrane sensor signal transduction histidine kinase 1675083..1676570 Thioalkalimicrobium cyclicum ALM1 10720291 YP_004537691.1 CDS Thicy_1452 NC_015581.1 1676567 1677286 D KEGG: ppd:Ppro_2228 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family 1676567..1677286 Thioalkalimicrobium cyclicum ALM1 10720292 YP_004537692.1 CDS Thicy_1453 NC_015581.1 1677301 1678536 R KEGG: reh:H16_A0973 flavoprotein; TIGRFAM: uncharacterized flavoprotein, PP_4765 family; HI0933-like protein; PFAM: HI0933-like protein; flavoprotein complement(1677301..1678536) Thioalkalimicrobium cyclicum ALM1 10720293 YP_004537693.1 CDS Thicy_1454 NC_015581.1 1678626 1679681 R KEGG: tcx:Tcr_1700 beta-lactamase-like; beta-lactamase-like protein complement(1678626..1679681) Thioalkalimicrobium cyclicum ALM1 10720294 YP_004537694.1 CDS Thicy_1455 NC_015581.1 1679731 1680330 R PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tcx:Tcr_1702 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1679731..1680330) Thioalkalimicrobium cyclicum ALM1 10720295 YP_004537695.1 CDS Thicy_1456 NC_015581.1 1680758 1682557 D KEGG: tcx:Tcr_2009 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1680758..1682557 Thioalkalimicrobium cyclicum ALM1 10720296 YP_004537696.1 CDS Thicy_1457 NC_015581.1 1682649 1683647 R KEGG: stp:Strop_2972 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-lactate dehydrogenase complement(1682649..1683647) Thioalkalimicrobium cyclicum ALM1 10720297 YP_004537697.1 CDS Thicy_1458 NC_015581.1 1683672 1684832 R PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: tcx:Tcr_2011 TRAP dicarboxylate transporter-DctP subunit; extracellular solute-binding protein complement(1683672..1684832) Thioalkalimicrobium cyclicum ALM1 10720298 YP_004537698.1 CDS Thicy_1459 NC_015581.1 1684934 1685659 D KEGG: sdn:Sden_3163 hypothetical protein; hypothetical protein 1684934..1685659 Thioalkalimicrobium cyclicum ALM1 10720299 YP_004537699.1 CDS Thicy_1460 NC_015581.1 1685684 1686733 D TIGRFAM: Secretion protein HlyD; KEGG: eba:ebA3924 secretion protein HlyD; RND family efflux transporter MFP subunit 1685684..1686733 Thioalkalimicrobium cyclicum ALM1 10720300 YP_004537700.1 CDS Thicy_1461 NC_015581.1 1686730 1689792 D PFAM: Acriflavin resistance protein; KEGG: tmz:Tmz1t_3537 acriflavin resistance protein; acriflavin resistance protein 1686730..1689792 Thioalkalimicrobium cyclicum ALM1 10720301 YP_004537701.1 CDS Thicy_1462 NC_015581.1 1689891 1691996 D KEGG: hha:Hhal_0551 TonB-dependent receptor; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; outer membrane insertion C-terminal signal 1689891..1691996 Thioalkalimicrobium cyclicum ALM1 10720302 YP_004537702.1 CDS Thicy_1463 NC_015581.1 1692150 1694972 D KEGG: tcx:Tcr_0063 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; Na+/H+ antiporter MnhB subunit-related protein; NADH dehydrogenase (quinone) 1692150..1694972 Thioalkalimicrobium cyclicum ALM1 10720303 YP_004537703.1 CDS Thicy_1464 NC_015581.1 1694972 1695322 D PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: tcx:Tcr_0062 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 1694972..1695322 Thioalkalimicrobium cyclicum ALM1 10720304 YP_004537704.1 CDS Thicy_1465 NC_015581.1 1695322 1696842 D KEGG: tcx:Tcr_0061 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH dehydrogenase (quinone) 1695322..1696842 Thioalkalimicrobium cyclicum ALM1 10720305 YP_004537705.1 CDS Thicy_1466 NC_015581.1 1696842 1697336 D PFAM: cation antiporter; KEGG: tcx:Tcr_0060 cation antiporter; cation antiporter 1696842..1697336 Thioalkalimicrobium cyclicum ALM1 10720306 YP_004537706.1 CDS Thicy_1467 NC_015581.1 1697330 1697599 D PFAM: Multiple resistance and pH regulation protein F; KEGG: tcx:Tcr_0059 putative monovalent cation/H+ antiporter subunit F; multiple resistance and pH regulation protein F 1697330..1697599 Thioalkalimicrobium cyclicum ALM1 10720307 YP_004537707.1 CDS Thicy_1468 NC_015581.1 1697609 1697932 D KEGG: tcx:Tcr_0058 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: Na+/H+ antiporter subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 1697609..1697932 Thioalkalimicrobium cyclicum ALM1 10720308 YP_004537708.1 CDS Thicy_1469 NC_015581.1 1698105 1699181 D KEGG: tcx:Tcr_0218 exonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 1698105..1699181 Thioalkalimicrobium cyclicum ALM1 10720309 YP_004537709.1 CDS Thicy_1470 NC_015581.1 1699190 1699651 D HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: tcx:Tcr_0217 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1699190..1699651 Thioalkalimicrobium cyclicum ALM1 10720310 YP_004537710.1 CDS Thicy_1471 NC_015581.1 1699659 1700579 R KEGG: tcx:Tcr_2014 chaperone DnaJ-like; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; chaperone DnaJ domain-containing protein complement(1699659..1700579) Thioalkalimicrobium cyclicum ALM1 10720311 YP_004537711.1 CDS Thicy_1472 NC_015581.1 1700724 1702103 D PFAM: Conserved hypothetical protein CHP00730; KEGG: tcx:Tcr_1882 hypothetical protein; hypothetical protein 1700724..1702103 Thioalkalimicrobium cyclicum ALM1 10720312 YP_004537712.1 CDS Thicy_1473 NC_015581.1 1702123 1703364 D KEGG: tcx:Tcr_1883 DEAD/DEAH box helicase-like; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; DEAD/DEAH box helicase domain-containing protein 1702123..1703364 Thioalkalimicrobium cyclicum ALM1 10720313 YP_004537713.1 CDS Thicy_1474 NC_015581.1 1703376 1704932 R PFAM: AAA-ATPase-like; Protein of unknown function DUF1703; KEGG: ddf:DEFDS_0353 hypothetical protein; AAA-ATPase-like protein complement(1703376..1704932) Thioalkalimicrobium cyclicum ALM1 10720314 YP_004537714.1 CDS Thicy_1475 NC_015581.1 1705120 1720284 R KEGG: rba:RB3527 heme/hemopexin utilization protein HuxA; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Autotransporter-associated beta strand repeat; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Polymorphic membrane protein, Chlamydia; filamentous hemagglutinin family outer membrane protein complement(1705120..1720284) Thioalkalimicrobium cyclicum ALM1 10720315 YP_004537715.1 CDS Thicy_1476 NC_015581.1 1720307 1722097 R PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: cpc:Cpar_1380 polypeptide-transport-associated domain protein ShlB-type; Polypeptide-transport-associated domain-containing protein ShlB-type complement(1720307..1722097) Thioalkalimicrobium cyclicum ALM1 10720316 YP_004537716.1 CDS Thicy_1477 NC_015581.1 1722258 1722932 R KEGG: har:HEAR0396 putative response regulator in two-component regulatory system; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; two component transcriptional regulator, winged helix family complement(1722258..1722932) Thioalkalimicrobium cyclicum ALM1 10720317 YP_004537717.1 CDS Thicy_1478 NC_015581.1 1723030 1724919 R KEGG: har:HEAR0395 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, extracellular region 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase complement(1723030..1724919) Thioalkalimicrobium cyclicum ALM1 10720318 YP_004537718.1 CDS Thicy_1479 NC_015581.1 1724932 1725990 R TIGRFAM: Pseudouridine synthase, TruD; HAMAP: tRNA pseudouridine synthase D; KEGG: tcx:Tcr_0216 pseudouridylate synthase; PFAM: Pseudouridine synthase, TruD; tRNA pseudouridine synthase D complement(1724932..1725990) Thioalkalimicrobium cyclicum ALM1 10720319 YP_004537719.1 CDS Thicy_1480 NC_015581.1 1725998 1726951 R PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: tcx:Tcr_0214 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 complement(1725998..1726951) Thioalkalimicrobium cyclicum ALM1 10720320 YP_004537720.1 CDS Thicy_1481 NC_015581.1 1727035 1728201 R KEGG: tcx:Tcr_0211 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Alcohol dehydrogenase complement(1727035..1728201) Thioalkalimicrobium cyclicum ALM1 10720321 YP_004537721.1 CDS Thicy_1482 NC_015581.1 1728258 1730342 R PFAM: DNA helicase, UvrD/REP type; KEGG: tcx:Tcr_0212 UvrD/REP helicase; UvrD/REP helicase complement(1728258..1730342) Thioalkalimicrobium cyclicum ALM1 10720322 YP_004537722.1 CDS Thicy_1483 NC_015581.1 1730400 1730993 D PFAM: Phosphoglycerate mutase; KEGG: pol:Bpro_4901 phosphoglycerate mutase; phosphoglycerate mutase 1730400..1730993 Thioalkalimicrobium cyclicum ALM1 10720323 YP_004537723.1 CDS Thicy_1484 NC_015581.1 1731120 1732967 D KEGG: cjj:CJJ81176_0174 McrBC restriction endonuclease system, McrB subunit, putative; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; ATPase 1731120..1732967 Thioalkalimicrobium cyclicum ALM1 10720324 YP_004537724.1 CDS Thicy_1485 NC_015581.1 1732976 1733242 D KEGG: alv:Alvin_1349 hypothetical protein; hypothetical protein 1732976..1733242 Thioalkalimicrobium cyclicum ALM1 10720325 YP_004537725.1 CDS Thicy_1486 NC_015581.1 1733235 1733486 D PFAM: Protein of unknown function DUF2442; KEGG: cli:Clim_0923 hypothetical protein; hypothetical protein 1733235..1733486 Thioalkalimicrobium cyclicum ALM1 10720326 YP_004537726.1 CDS Thicy_1487 NC_015581.1 1733487 1734773 D PFAM: 5-methylcytosine restriction system component-like protein; KEGG: sbm:Shew185_1981 hypothetical protein; 5-methylcytosine restriction system component-like protein 1733487..1734773 Thioalkalimicrobium cyclicum ALM1 10720327 YP_004537727.1 CDS Thicy_1488 NC_015581.1 1734774 1735025 D hypothetical protein 1734774..1735025 Thioalkalimicrobium cyclicum ALM1 10720328 YP_004537728.1 CDS Thicy_1489 NC_015581.1 1735071 1736351 R TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: psa:PST_0568 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(1735071..1736351) Thioalkalimicrobium cyclicum ALM1 10720329 YP_004537729.1 CDS Thicy_1490 NC_015581.1 1736456 1737106 R PFAM: Cupin 2, conserved barrel; KEGG: tcx:Tcr_1225 anti-sigm factor, ChrR; anti-ECFsigma factor ChrR complement(1736456..1737106) Thioalkalimicrobium cyclicum ALM1 10720330 YP_004537730.1 CDS Thicy_1491 NC_015581.1 1737193 1737774 D PFAM: Methyltransferase small; KEGG: tcx:Tcr_0213 methyltransferase small; methyltransferase small 1737193..1737774 Thioalkalimicrobium cyclicum ALM1 10720331 YP_004537731.1 CDS Thicy_1492 NC_015581.1 1737854 1738948 R KEGG: min:Minf_1656 TPR repeat protein, SEL1 subfamily; PFAM: Sel1-like; SMART: Sel1-like; Sel1 domain-containing protein repeat-containing protein complement(1737854..1738948) Thioalkalimicrobium cyclicum ALM1 10720332 YP_004537732.1 CDS Thicy_1493 NC_015581.1 1738962 1739504 R PFAM: Ankyrin repeat; ankyrin complement(1738962..1739504) Thioalkalimicrobium cyclicum ALM1 10720333 YP_004537733.1 CDS Thicy_1494 NC_015581.1 1739533 1740435 R hypothetical protein complement(1739533..1740435) Thioalkalimicrobium cyclicum ALM1 10720334 YP_004537734.1 CDS Thicy_1495 NC_015581.1 1740693 1741883 D SMART: ATPase, AAA+ type, core; KEGG: ddf:DEFDS_0880 hypothetical protein; AAA ATPase 1740693..1741883 Thioalkalimicrobium cyclicum ALM1 10720335 YP_004537735.1 CDS Thicy_1498 NC_015581.1 1744151 1747417 R KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; adenine specific DNA methyltransferase complement(1744151..1747417) Thioalkalimicrobium cyclicum ALM1 10720338 YP_004537736.1 CDS Thicy_1499 NC_015581.1 1747508 1747699 R PFAM: HAD superfamily hydrolase-like, type 3; haloacid dehalogenase domain-containing protein hydrolase complement(1747508..1747699) Thioalkalimicrobium cyclicum ALM1 10720339 YP_004537737.1 CDS Thicy_1500 NC_015581.1 1747934 1748320 D PFAM: Uncharacterised protein family UPF0153; KEGG: xne:XNC1_3203 putative ferredoxin; hypothetical protein 1747934..1748320 Thioalkalimicrobium cyclicum ALM1 10720340 YP_004537738.1 CDS Thicy_1501 NC_015581.1 1748342 1748536 R hypothetical protein complement(1748342..1748536) Thioalkalimicrobium cyclicum ALM1 10720341 YP_004537739.1 CDS Thicy_1502 NC_015581.1 1748533 1748853 R hypothetical protein complement(1748533..1748853) Thioalkalimicrobium cyclicum ALM1 10720342 YP_004537740.1 CDS Thicy_1503 NC_015581.1 1748858 1749373 R KEGG: hypothetical protein; hypothetical protein complement(1748858..1749373) Thioalkalimicrobium cyclicum ALM1 10720343 YP_004537741.1 CDS Thicy_1504 NC_015581.1 1749391 1750290 R TIGRFAM: beta-carotene 15,15'-monooxygenase, Brp/Blh family; KEGG: apb:SAR116_2131 putative transmembrane protein; Brp/Blh family beta-carotene 15,15'-monooxygenase complement(1749391..1750290) Thioalkalimicrobium cyclicum ALM1 10720344 YP_004537742.1 CDS Thicy_1505 NC_015581.1 1750292 1751446 R PFAM: Lycopene beta/epsilon cyclase; KEGG: vha:VIBHAR_02164 hypothetical protein; Lycopene beta and epsilon cyclase complement(1750292..1751446) Thioalkalimicrobium cyclicum ALM1 10720345 YP_004537743.1 CDS Thicy_1506 NC_015581.1 1751446 1752318 R KEGG: vha:VIBHAR_02163 phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase complement(1751446..1752318) Thioalkalimicrobium cyclicum ALM1 10720346 YP_004537744.1 CDS Thicy_1507 NC_015581.1 1752318 1753802 R KEGG: rva:Rvan_0155 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; phytoene desaturase complement(1752318..1753802) Thioalkalimicrobium cyclicum ALM1 10720347 YP_004537745.1 CDS Thicy_1508 NC_015581.1 1753799 1754689 R PFAM: Polyprenyl synthetase; KEGG: vha:VIBHAR_02161 hypothetical protein; polyprenyl synthetase complement(1753799..1754689) Thioalkalimicrobium cyclicum ALM1 10720348 YP_004537746.1 CDS Thicy_1509 NC_015581.1 1754772 1755521 R PFAM: Rhodopsin, bacterial; KEGG: gvi:gll0198 bacterioopsin; rhodopsin complement(1754772..1755521) Thioalkalimicrobium cyclicum ALM1 10720349 YP_004537747.1 CDS Thicy_1510 NC_015581.1 1755736 1756431 R KEGG: tcx:Tcr_0203 hypothetical protein; hypothetical protein complement(1755736..1756431) Thioalkalimicrobium cyclicum ALM1 10720350 YP_004537748.1 CDS Thicy_1511 NC_015581.1 1756431 1757942 R TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: tcx:Tcr_0202 Mg chelatase-related protein; SMART: ATPase, AAA+ type, core; Mg chelatase subunit ChlI complement(1756431..1757942) Thioalkalimicrobium cyclicum ALM1 10720351 YP_004537749.1 CDS Thicy_1512 NC_015581.1 1757939 1758193 R PFAM: Protein of unknown function DUF526; KEGG: amc:MADE_00075 hypothetical protein; hypothetical protein complement(1757939..1758193) Thioalkalimicrobium cyclicum ALM1 10720352 YP_004537750.1 CDS Thicy_1513 NC_015581.1 1758288 1758971 R PFAM: Sporulation/cell division region, bacteria; KEGG: tcx:Tcr_0199 sporulation related; sporulation domain-containing protein complement(1758288..1758971) Thioalkalimicrobium cyclicum ALM1 10720353 YP_004537751.1 CDS Thicy_1514 NC_015581.1 1758981 1760762 R TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: tcx:Tcr_0198 arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1758981..1760762) Thioalkalimicrobium cyclicum ALM1 10720354 YP_004537752.1 CDS Thicy_1515 NC_015581.1 1760808 1763246 R SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: tcx:Tcr_0196 DNA topoisomerase; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase I complement(1760808..1763246) Thioalkalimicrobium cyclicum ALM1 10720355 YP_004537753.1 CDS Thicy_1516 NC_015581.1 1763323 1764342 R KEGG: tcx:Tcr_0271 hypothetical protein; hypothetical protein complement(1763323..1764342) Thioalkalimicrobium cyclicum ALM1 10720356 YP_004537754.1 CDS Thicy_1517 NC_015581.1 1764342 1764722 R KEGG: tcx:Tcr_0270 hypothetical protein; hypothetical protein complement(1764342..1764722) Thioalkalimicrobium cyclicum ALM1 10720357 YP_004537755.1 CDS Thicy_1518 NC_015581.1 1764840 1766021 R KEGG: tcx:Tcr_0194 DNA processing protein DprA, putative; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; DNA protecting protein DprA complement(1764840..1766021) Thioalkalimicrobium cyclicum ALM1 10720358 YP_004537756.1 CDS Thicy_1519 NC_015581.1 1766077 1766589 D PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: tcx:Tcr_0193 peptide deformylase; peptide deformylase 1766077..1766589 Thioalkalimicrobium cyclicum ALM1 10720359 YP_004537757.1 CDS Thicy_1520 NC_015581.1 1766589 1767524 D PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: tcx:Tcr_0192 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1766589..1767524 Thioalkalimicrobium cyclicum ALM1 10720360 YP_004537758.1 CDS Thicy_1521 NC_015581.1 1767524 1768825 D KEGG: tcx:Tcr_0191 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; sun protein 1767524..1768825 Thioalkalimicrobium cyclicum ALM1 10720361 YP_004537759.1 CDS Thicy_1522 NC_015581.1 1768791 1769396 D KEGG: tcx:Tcr_0190 hypothetical protein; hypothetical protein 1768791..1769396 Thioalkalimicrobium cyclicum ALM1 10720362 YP_004537760.1 CDS Thicy_1523 NC_015581.1 1769397 1771607 D KEGG: tcx:Tcr_0189 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1769397..1771607 Thioalkalimicrobium cyclicum ALM1 10720363 YP_004537761.1 CDS Thicy_1524 NC_015581.1 1771607 1772950 D KEGG: tcx:Tcr_0188 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; two component, sigma54 specific, transcriptional regulator, Fis family 1771607..1772950 Thioalkalimicrobium cyclicum ALM1 10720364 YP_004537762.1 CDS Thicy_1525 NC_015581.1 1772963 1774363 D PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: tcx:Tcr_0187 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 1772963..1774363 Thioalkalimicrobium cyclicum ALM1 10720365 YP_004537763.1 CDS Thicy_1526 NC_015581.1 1774366 1775817 D KEGG: tcx:Tcr_0186 K+ transporter trk; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter; TrkH family potassium uptake protein 1774366..1775817 Thioalkalimicrobium cyclicum ALM1 10720366 YP_004537764.1 CDS Thicy_1527 NC_015581.1 1775814 1776032 R KEGG: tcx:Tcr_1959 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(1775814..1776032) Thioalkalimicrobium cyclicum ALM1 10720367 YP_004537765.1 CDS Thicy_1528 NC_015581.1 1776034 1778541 R TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tcx:Tcr_1960 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; heavy metal translocating P-type ATPase complement(1776034..1778541) Thioalkalimicrobium cyclicum ALM1 10720368 YP_004537766.1 CDS Thicy_1529 NC_015581.1 1778545 1779063 R PFAM: FixH; KEGG: tcx:Tcr_1961 hypothetical protein; FixH family protein complement(1778545..1779063) Thioalkalimicrobium cyclicum ALM1 10720369 YP_004537767.1 CDS Thicy_1530 NC_015581.1 1779090 1780556 R TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: tcx:Tcr_1962 4Fe-4S ferredoxin, iron-sulfur binding; cytochrome c oxidase accessory protein CcoG complement(1779090..1780556) Thioalkalimicrobium cyclicum ALM1 10720370 YP_004537768.1 CDS Thicy_1531 NC_015581.1 1780663 1780782 R hypothetical protein complement(1780663..1780782) Thioalkalimicrobium cyclicum ALM1 10720371 YP_004537769.1 CDS Thicy_1532 NC_015581.1 1780814 1781740 R PFAM: Cytochrome c, class I; KEGG: tcx:Tcr_1963 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c class I complement(1780814..1781740) Thioalkalimicrobium cyclicum ALM1 10720372 YP_004537770.1 CDS Thicy_1533 NC_015581.1 1781762 1781902 R hypothetical protein complement(1781762..1781902) Thioalkalimicrobium cyclicum ALM1 10720373 YP_004537771.1 CDS Thicy_1534 NC_015581.1 1781937 1782791 R KEGG: tcx:Tcr_1964 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome C oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; cytochrome c oxidase, cbb3-type subunit II complement(1781937..1782791) Thioalkalimicrobium cyclicum ALM1 10720374 YP_004537772.1 CDS Thicy_1535 NC_015581.1 1782856 1784298 R TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; KEGG: tcx:Tcr_1965 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; cytochrome c oxidase, cbb3-type subunit I complement(1782856..1784298) Thioalkalimicrobium cyclicum ALM1 10720375 YP_004537773.1 CDS Thicy_1536 NC_015581.1 1784675 1785268 D HAMAP: Imidazoleglycerol-phosphate dehydratase; KEGG: tcx:Tcr_1966 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1784675..1785268 Thioalkalimicrobium cyclicum ALM1 10720376 YP_004537774.1 CDS Thicy_1537 NC_015581.1 1785272 1785919 D TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: tcx:Tcr_1967 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; imidazole glycerol phosphate synthase subunit hisH 1785272..1785919 Thioalkalimicrobium cyclicum ALM1 10720377 YP_004537775.1 CDS Thicy_1538 NC_015581.1 1785961 1786707 D PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: tcx:Tcr_1968 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase 1785961..1786707 Thioalkalimicrobium cyclicum ALM1 10720378 YP_004537776.1 CDS Thicy_1539 NC_015581.1 1786708 1787481 D PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: tcx:Tcr_1969 imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit hisF 1786708..1787481 Thioalkalimicrobium cyclicum ALM1 10720379 YP_004537777.1 CDS Thicy_1540 NC_015581.1 1787478 1787801 D TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: tcx:Tcr_1970 phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 1787478..1787801 Thioalkalimicrobium cyclicum ALM1 10720380 YP_004537778.1 CDS Thicy_1541 NC_015581.1 1787815 1788135 D PFAM: Histidine triad (HIT) protein; KEGG: tcx:Tcr_1971 histidine triad (HIT) protein; histidine triad (HIT) protein 1787815..1788135 Thioalkalimicrobium cyclicum ALM1 10720381 YP_004537779.1 CDS Thicy_1542 NC_015581.1 1788193 1788450 D TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: tcx:Tcr_1972 twin arginine-targeting protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase protein tatA/E-like protein 1788193..1788450 Thioalkalimicrobium cyclicum ALM1 10720382 YP_004537780.1 CDS Thicy_1543 NC_015581.1 1788498 1788953 D KEGG: tcx:Tcr_1973 twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; Sec-independent protein translocase protein tatB-like protein 1788498..1788953 Thioalkalimicrobium cyclicum ALM1 10720383 YP_004537781.1 CDS Thicy_1544 NC_015581.1 1788960 1789970 D KEGG: tcx:Tcr_1974 sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 1788960..1789970 Thioalkalimicrobium cyclicum ALM1 10720384 YP_004537782.1 CDS Thicy_1545 NC_015581.1 1789936 1791654 D KEGG: tcx:Tcr_1975 hypothetical protein; hypothetical protein 1789936..1791654 Thioalkalimicrobium cyclicum ALM1 10720385 YP_004537783.1 CDS Thicy_1546 NC_015581.1 1791658 1792356 D PFAM: Peptidase, membrane zinc metallopeptidase, putative; KEGG: tcx:Tcr_1976 hypothetical protein; peptidase membrane zinc metallopeptidase 1791658..1792356 Thioalkalimicrobium cyclicum ALM1 10720386 YP_004537784.1 CDS Thicy_1547 NC_015581.1 1792421 1793278 D KEGG: tcx:Tcr_2134 sigma 32 (RpoH); TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-32 subunit RpoH 1792421..1793278 Thioalkalimicrobium cyclicum ALM1 10720387 YP_004537785.1 CDS Thicy_1548 NC_015581.1 1793339 1793878 R PFAM: Calcium/calmodulin-dependent protein kinase II, association-domain; KEGG: tkm:TK90_0874 calcium/calmodulin dependent protein kinase II association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein complement(1793339..1793878) Thioalkalimicrobium cyclicum ALM1 10720388 YP_004537786.1 CDS Thicy_1549 NC_015581.1 1793905 1794531 R PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0851 hypothetical protein; microcompartments protein complement(1793905..1794531) Thioalkalimicrobium cyclicum ALM1 10720389 YP_004537787.1 CDS Thicy_1550 NC_015581.1 1794554 1795270 R PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: pct:PC1_3454 putative deoxyribonucleotide triphosphate pyrophosphatase; nucleoside-triphosphatase rdgB complement(1794554..1795270) Thioalkalimicrobium cyclicum ALM1 10720390 YP_004537788.1 CDS Thicy_1551 NC_015581.1 1795275 1795823 R PFAM: Calcium/calmodulin-dependent protein kinase II, association-domain; KEGG: tkm:TK90_0874 calcium/calmodulin dependent protein kinase II association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein complement(1795275..1795823) Thioalkalimicrobium cyclicum ALM1 10720391 YP_004537789.1 CDS Thicy_1552 NC_015581.1 1795883 1796881 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0852 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1795883..1796881) Thioalkalimicrobium cyclicum ALM1 10720392 YP_004537790.1 CDS Thicy_1553 NC_015581.1 1796898 1797218 R hypothetical protein complement(1796898..1797218) Thioalkalimicrobium cyclicum ALM1 10720393 YP_004537791.1 CDS Thicy_1554 NC_015581.1 1797238 1798218 R PFAM: Protein of unknown function DUF897; KEGG: chl:Chy400_1931 protein of unknown function DUF897; hypothetical protein complement(1797238..1798218) Thioalkalimicrobium cyclicum ALM1 10720394 YP_004537792.1 CDS Thicy_1555 NC_015581.1 1798346 1799704 R PFAM: Sulphate transporter; KEGG: tgr:Tgr7_1442 sulphate transporter; sulfate transporter complement(1798346..1799704) Thioalkalimicrobium cyclicum ALM1 10720395 YP_004537793.1 CDS Thicy_1556 NC_015581.1 1799880 1800125 R KEGG: tcx:Tcr_0848 hypothetical protein; hypothetical protein complement(1799880..1800125) Thioalkalimicrobium cyclicum ALM1 10720396 YP_004537794.1 CDS Thicy_1557 NC_015581.1 1800122 1800664 R PFAM: Ferritin/Dps protein; KEGG: tcx:Tcr_0847 rubrerythrin; ferritin Dps family protein complement(1800122..1800664) Thioalkalimicrobium cyclicum ALM1 10720397 YP_004537795.1 CDS Thicy_1558 NC_015581.1 1800714 1801022 R PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0846 microcompartments protein; microcompartments protein complement(1800714..1801022) Thioalkalimicrobium cyclicum ALM1 10720398 YP_004537796.1 CDS Thicy_1559 NC_015581.1 1801098 1801397 R PFAM: Microcompartment protein, bacteria; KEGG: tcx:Tcr_0845 microcompartments protein; microcompartments protein complement(1801098..1801397) Thioalkalimicrobium cyclicum ALM1 10720399 YP_004537797.1 CDS Thicy_1560 NC_015581.1 1801516 1801776 R KEGG: tcx:Tcr_0843 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; TIGRFAM: Carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; carboxysome peptide B complement(1801516..1801776) Thioalkalimicrobium cyclicum ALM1 10720400 YP_004537798.1 CDS Thicy_1561 NC_015581.1 1801776 1802024 R KEGG: tcx:Tcr_0842 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; TIGRFAM: Carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; carboxysome peptide A complement(1801776..1802024) Thioalkalimicrobium cyclicum ALM1 10720401 YP_004537799.1 CDS Thicy_1562 NC_015581.1 1802021 1802797 R hypothetical protein complement(1802021..1802797) Thioalkalimicrobium cyclicum ALM1 10720402 YP_004537800.1 CDS Thicy_1563 NC_015581.1 1802801 1804954 R KEGG: sye:Syncc9902_1612 putative carboxysome structural peptide CsoS2; putative carboxysome structural peptide CsoS2 complement(1802801..1804954) Thioalkalimicrobium cyclicum ALM1 10720403 YP_004537801.1 CDS Thicy_1564 NC_015581.1 1804988 1805332 R KEGG: tcx:Tcr_0839 ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, small chain; ribulose-bisphosphate carboxylase complement(1804988..1805332) Thioalkalimicrobium cyclicum ALM1 10720404 YP_004537802.1 CDS Thicy_1565 NC_015581.1 1805368 1806780 R HAMAP: Ribulose bisphosphate carboxylase large chain; KEGG: tcx:Tcr_0838 ribulose bisophosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase, large subunit, C-terminal; Ribulose bisphosphate carboxylase, large subunit, N-terminal; ribulose bisphosphate carboxylase large chain complement(1805368..1806780) Thioalkalimicrobium cyclicum ALM1 10720405 YP_004537803.1 CDS Thicy_1566 NC_015581.1 1806963 1807334 R PFAM: Invasion gene expression up-regulator, SirB; KEGG: pol:Bpro_4728 invasion gene expression up-regulator, SirB; Invasion gene expression up-regulator SirB complement(1806963..1807334) Thioalkalimicrobium cyclicum ALM1 10720406 YP_004537804.1 CDS Thicy_1567 NC_015581.1 1807354 1808286 R KEGG: tcx:Tcr_1981 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC complement(1807354..1808286) Thioalkalimicrobium cyclicum ALM1 10720407 YP_004537805.1 CDS Thicy_1568 NC_015581.1 1808279 1809073 R KEGG: tcx:Tcr_1980 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; carboxylesterase complement(1808279..1809073) Thioalkalimicrobium cyclicum ALM1 10720408 YP_004537806.1 CDS Thicy_1569 NC_015581.1 1809277 1809486 D KEGG: tcx:Tcr_1862 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1809277..1809486 Thioalkalimicrobium cyclicum ALM1 10720409 YP_004537807.1 CDS Thicy_1570 NC_015581.1 1809594 1810088 D KEGG: tcx:Tcr_0547 hypothetical protein; hypothetical protein 1809594..1810088 Thioalkalimicrobium cyclicum ALM1 10720410 YP_004537808.1 CDS Thicy_1571 NC_015581.1 1810075 1811232 R PFAM: Aminotransferase, class I/II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: tcx:Tcr_1979 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1810075..1811232) Thioalkalimicrobium cyclicum ALM1 10720411 YP_004537809.1 CDS Thicy_1572 NC_015581.1 1811253 1812305 R KEGG: tcx:Tcr_1978 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(1811253..1812305) Thioalkalimicrobium cyclicum ALM1 10720412 YP_004537810.1 CDS Thicy_1573 NC_015581.1 1812316 1813002 D PFAM: Phosphoribosyltransferase; KEGG: tcx:Tcr_1977 hypothetical protein; phosphoribosyltransferase 1812316..1813002 Thioalkalimicrobium cyclicum ALM1 10720413 YP_004537811.1 CDS Thicy_1574 NC_015581.1 1813058 1814191 D TIGRFAM: Glycerate kinase; KEGG: tcx:Tcr_0775 glycerate kinase; PFAM: Glycerate kinase; glycerate kinase 1813058..1814191 Thioalkalimicrobium cyclicum ALM1 10720414 YP_004537812.1 CDS Thicy_1575 NC_015581.1 1814224 1816044 R PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: tcx:Tcr_0774 alpha amylase, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; sucrose phosphorylase complement(1814224..1816044) Thioalkalimicrobium cyclicum ALM1 10720415 YP_004537813.1 CDS Thicy_1576 NC_015581.1 1816060 1817271 R KEGG: tcx:Tcr_0773 hypothetical protein; hypothetical protein complement(1816060..1817271) Thioalkalimicrobium cyclicum ALM1 10720416 YP_004537814.1 CDS Thicy_1577 NC_015581.1 1817268 1818050 R KEGG: tcx:Tcr_0772 HAD family hydrolase YedP; TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3; mannosyl-3-phosphoglycerate phosphatase family protein complement(1817268..1818050) Thioalkalimicrobium cyclicum ALM1 10720417 YP_004537815.1 CDS Thicy_1578 NC_015581.1 1818130 1820310 R PFAM: DNA helicase, UvrD/REP type; KEGG: tcx:Tcr_0128 DNA-dependent helicase II; UvrD/REP helicase complement(1818130..1820310) Thioalkalimicrobium cyclicum ALM1 10720418 YP_004537816.1 CDS Thicy_1579 NC_015581.1 1820612 1820938 D KEGG: tcx:Tcr_0127 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1820612..1820938 Thioalkalimicrobium cyclicum ALM1 10720419 YP_004537817.1 CDS Thicy_1580 NC_015581.1 1821051 1822307 D TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: tcx:Tcr_0126 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; transcription termination factor Rho 1821051..1822307 Thioalkalimicrobium cyclicum ALM1 10720420 YP_004537818.1 CDS Thicy_1581 NC_015581.1 1822397 1822648 D TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: tcx:Tcr_0125 ribosomal protein L31; PFAM: Ribosomal protein L31; 50S ribosomal protein L31 1822397..1822648 Thioalkalimicrobium cyclicum ALM1 10720421 YP_004537819.1 CDS Thicy_1582 NC_015581.1 1822841 1823902 D PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: tcx:Tcr_0123 uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 1822841..1823902 Thioalkalimicrobium cyclicum ALM1 10720422 YP_004537820.1 CDS Thicy_1583 NC_015581.1 1823970 1824239 R KEGG: tcx:Tcr_0121 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX; Fe(2+)-trafficking protein complement(1823970..1824239) Thioalkalimicrobium cyclicum ALM1 10720423 YP_004537821.1 CDS Thicy_1584 NC_015581.1 1824264 1825370 R TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: tcx:Tcr_0120 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; A/G-specific adenine glycosylase complement(1824264..1825370) Thioalkalimicrobium cyclicum ALM1 10720424 YP_004537822.1 CDS Thicy_1585 NC_015581.1 1825446 1826195 D TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: tcx:Tcr_0119 hypothetical protein; PFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1825446..1826195 Thioalkalimicrobium cyclicum ALM1 10720425 YP_004537823.1 CDS Thicy_1586 NC_015581.1 1826277 1829084 D TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: tcx:Tcr_0044 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; DNA polymerase I 1826277..1829084 Thioalkalimicrobium cyclicum ALM1 10720426 YP_004537824.1 CDS Thicy_1587 NC_015581.1 1829155 1829820 R KEGG: tin:Tint_0548 hypothetical protein; hypothetical protein complement(1829155..1829820) Thioalkalimicrobium cyclicum ALM1 10720427 YP_004537825.1 CDS Thicy_1588 NC_015581.1 1829926 1830834 R PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_0183 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(1829926..1830834) Thioalkalimicrobium cyclicum ALM1 10720428 YP_004537826.1 CDS Thicy_1589 NC_015581.1 1830827 1831594 R PFAM: PP-loop; KEGG: tcx:Tcr_0182 PP-loop; PP-loop domain-containing protein complement(1830827..1831594) Thioalkalimicrobium cyclicum ALM1 10720429 YP_004537827.1 CDS Thicy_1590 NC_015581.1 1831676 1832776 R TIGRFAM: tRNA (uracil-5-)-methyltransferase; HAMAP: tRNA (uracil-5-)-methyltransferase; KEGG: tcx:Tcr_0173 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; tRNA (uracil-5-)-methyltransferase complement(1831676..1832776) Thioalkalimicrobium cyclicum ALM1 10720430 YP_004537828.1 CDS Thicy_1592 NC_015581.1 1835067 1835462 D KEGG: avn:Avin_24460 hypothetical protein; hypothetical protein 1835067..1835462 Thioalkalimicrobium cyclicum ALM1 10720432 YP_004537829.1 CDS Thicy_1593 NC_015581.1 1835518 1835748 D KEGG: amc:MADE_01196 helix-turn-helix protein, CopG; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985; addiction module antidote protein 1835518..1835748 Thioalkalimicrobium cyclicum ALM1 10720433 YP_004537830.1 CDS Thicy_1594 NC_015581.1 1835745 1836044 D PFAM: Plasmid stabilisation system; KEGG: bge:BC1002_5717 plasmid stabilization system; plasmid stabilization system 1835745..1836044 Thioalkalimicrobium cyclicum ALM1 10720434 YP_004537831.1 CDS Thicy_1595 NC_015581.1 1836501 1838378 D TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: tcx:Tcr_0148 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase 1836501..1838378 Thioalkalimicrobium cyclicum ALM1 10720435 YP_004537832.1 CDS Thicy_1596 NC_015581.1 1838392 1839435 D PFAM: FAD dependent oxidoreductase; KEGG: tcx:Tcr_0147 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1838392..1839435 Thioalkalimicrobium cyclicum ALM1 10720436 YP_004537833.1 CDS Thicy_1597 NC_015581.1 1839553 1839747 D KEGG: bbt:BBta_6223 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS; thiamine biosynthesis protein ThiS 1839553..1839747 Thioalkalimicrobium cyclicum ALM1 10720437 YP_004537834.1 CDS Thicy_1598 NC_015581.1 1839907 1840716 D KEGG: sun:SUN_0529 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis; thiazole synthase 1839907..1840716 Thioalkalimicrobium cyclicum ALM1 10720438 YP_004537835.1 CDS Thicy_1599 NC_015581.1 1840800 1841432 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hde:HDEF_1038 plasmid partition protein ParA-like protein; Cobyrinic acid ac-diamide synthase 1840800..1841432 Thioalkalimicrobium cyclicum ALM1 10720439 YP_004537836.1 CDS Thicy_1600 NC_015581.1 1841422 1841685 D hypothetical protein 1841422..1841685 Thioalkalimicrobium cyclicum ALM1 10720440 YP_004537837.1 CDS Thicy_1601 NC_015581.1 1841721 1842224 D KEGG: cpc:Cpar_1318 thiol peroxidase; HAMAP: thiol peroxidase; PFAM: Redoxin; thiol peroxidase 1841721..1842224 Thioalkalimicrobium cyclicum ALM1 10720441 YP_004537838.1 CDS Thicy_1602 NC_015581.1 1842306 1842740 D PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: swp:swp_3689 hypothetical protein; hypothetical protein 1842306..1842740 Thioalkalimicrobium cyclicum ALM1 10720442 YP_004537839.1 CDS Thicy_1603 NC_015581.1 1842745 1843596 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: tcx:Tcr_2161 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate octaprenyltransferase complement(1842745..1843596) Thioalkalimicrobium cyclicum ALM1 10720443 YP_004537840.1 CDS Thicy_1604 NC_015581.1 1843604 1843849 R hypothetical protein complement(1843604..1843849) Thioalkalimicrobium cyclicum ALM1 10720444 YP_004537841.1 CDS Thicy_1605 NC_015581.1 1843862 1845247 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: tcx:Tcr_2163 UDP-N-acetylglucosamine pyrophosphorylase; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1843862..1845247) Thioalkalimicrobium cyclicum ALM1 10720445 YP_004537842.1 CDS Thicy_1606 NC_015581.1 1845379 1845813 R TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: tcx:Tcr_2164 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; ATP synthase subunit epsilon complement(1845379..1845813) Thioalkalimicrobium cyclicum ALM1 10720446 YP_004537843.1 CDS Thicy_1607 NC_015581.1 1845820 1847199 R TIGRFAM: ATPase, F1 complex, beta subunit; HAMAP: ATPase, F1 complex, beta subunit; KEGG: tcx:Tcr_2165 F0F1 ATP synthase subunit beta; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit beta complement(1845820..1847199) Thioalkalimicrobium cyclicum ALM1 10720447 YP_004537844.1 CDS Thicy_1608 NC_015581.1 1847231 1848097 R TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: tcx:Tcr_2166 ATP synthase F1, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma complement(1847231..1848097) Thioalkalimicrobium cyclicum ALM1 10720448 YP_004537845.1 CDS Thicy_1609 NC_015581.1 1848110 1849651 R TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: tcx:Tcr_2167 ATP synthase F1, alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATP synthase subunit alpha complement(1848110..1849651) Thioalkalimicrobium cyclicum ALM1 10720449 YP_004537846.1 CDS Thicy_1610 NC_015581.1 1849667 1850206 R TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: tcx:Tcr_2168 ATP synthase F1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta complement(1849667..1850206) Thioalkalimicrobium cyclicum ALM1 10720450 YP_004537847.1 CDS Thicy_1611 NC_015581.1 1850219 1850689 R TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: tcx:Tcr_2169 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; ATP synthase subunit b complement(1850219..1850689) Thioalkalimicrobium cyclicum ALM1 10720451 YP_004537848.1 CDS Thicy_1612 NC_015581.1 1850740 1851030 R TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: tcx:Tcr_2170 ATP synthase F0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; ATP synthase subunit c complement(1850740..1851030) Thioalkalimicrobium cyclicum ALM1 10720452 YP_004537849.1 CDS Thicy_1613 NC_015581.1 1851141 1851956 R TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: tcx:Tcr_2171 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a complement(1851141..1851956) Thioalkalimicrobium cyclicum ALM1 10720453 YP_004537850.1 CDS Thicy_1614 NC_015581.1 1851968 1852330 R KEGG: tcx:Tcr_2172 hypothetical protein; hypothetical protein complement(1851968..1852330) Thioalkalimicrobium cyclicum ALM1 10720454 YP_004537851.1 CDS Thicy_1615 NC_015581.1 1852323 1852604 R KEGG: tcx:Tcr_2173 hypothetical protein; hypothetical protein complement(1852323..1852604) Thioalkalimicrobium cyclicum ALM1 10720455 YP_004537852.1 CDS Thicy_1616 NC_015581.1 1852785 1853657 R TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: tcx:Tcr_2174 ParB-like partition proteins; SMART: ParB-like nuclease; parB-like partition protein complement(1852785..1853657) Thioalkalimicrobium cyclicum ALM1 10720456 YP_004537853.1 CDS Thicy_1617 NC_015581.1 1853670 1854437 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tcx:Tcr_2175 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(1853670..1854437) Thioalkalimicrobium cyclicum ALM1 10720457 YP_004537854.1 CDS Thicy_1618 NC_015581.1 1854437 1855069 R TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: tcx:Tcr_2176 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; Ribosomal RNA small subunit methyltransferase G complement(1854437..1855069) Thioalkalimicrobium cyclicum ALM1 10720458 YP_004537855.1 CDS Thicy_1619 NC_015581.1 1855066 1856994 R TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: tcx:Tcr_2177 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG complement(1855066..1856994) Thioalkalimicrobium cyclicum ALM1 10720459 YP_004537856.1 CDS Thicy_1620 NC_015581.1 1857178 1857723 D KEGG: tcx:Tcr_2178 hypothetical protein; hypothetical protein 1857178..1857723 Thioalkalimicrobium cyclicum ALM1 10720460 YP_004537857.1 CDS Thicy_1621 NC_015581.1 1857697 1860222 R SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; manually curated; TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; KEGG: tcx:Tcr_0554 ATP-dependent helicase HrpB; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; ATP-dependent helicase HrpB complement(1857697..1860222) Thioalkalimicrobium cyclicum ALM1 10720461 YP_004537858.1 CDS Thicy_1622 NC_015581.1 1860224 1862155 R PFAM: Protein of unknown function DUF945, bacterial; KEGG: mmr:Mmar10_0126 hypothetical protein; hypothetical protein complement(1860224..1862155) Thioalkalimicrobium cyclicum ALM1 10720462 YP_004537859.1 CDS Thicy_1623 NC_015581.1 1862273 1862878 D PFAM: Flavin reductase-like, FMN-binding; KEGG: psm:PSM_A0942 hypothetical protein; flavin reductase domain-containing FMN-binding protein 1862273..1862878 Thioalkalimicrobium cyclicum ALM1 10720463 YP_004537860.1 CDS Thicy_1624 NC_015581.1 1862905 1863747 R PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; HAMAP: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: tcx:Tcr_2191 7-cyano-7-deazaguanine reductase; NADPH-dependent 7-cyano-7-deazaguanine reductase complement(1862905..1863747) Thioalkalimicrobium cyclicum ALM1 10720464 YP_004537861.1 CDS Thicy_1625 NC_015581.1 1864128 1866200 R PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tgr:Tgr7_0865 TonB-dependent receptor; TonB-dependent receptor complement(1864128..1866200) Thioalkalimicrobium cyclicum ALM1 10720465 YP_004537862.1 CDS Thicy_1626 NC_015581.1 1866277 1866552 R KEGG: svo:SVI_2174 hypothetical protein; hypothetical protein complement(1866277..1866552) Thioalkalimicrobium cyclicum ALM1 10720466 YP_004537863.1 CDS Thicy_1627 NC_015581.1 1866562 1866717 R PFAM: Hemin uptake protein hemP; hemin uptake protein HemP complement(1866562..1866717) Thioalkalimicrobium cyclicum ALM1 10720467 YP_004537864.1 CDS Thicy_1628 NC_015581.1 1866936 1868117 R PFAM: HemY, N-terminal; KEGG: tcx:Tcr_0115 HemY-like; HemY domain-containing protein complement(1866936..1868117) Thioalkalimicrobium cyclicum ALM1 10720468 YP_004537865.1 CDS Thicy_1629 NC_015581.1 1868114 1869088 R KEGG: cyj:Cyan7822_3081 BRCT domain-containing protein; hypothetical protein complement(1868114..1869088) Thioalkalimicrobium cyclicum ALM1 10720469 YP_004537866.1 CDS Thicy_1630 NC_015581.1 1869085 1869909 R PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: son:SO_4314 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 complement(1869085..1869909) Thioalkalimicrobium cyclicum ALM1 10720470 YP_004537867.1 CDS Thicy_1631 NC_015581.1 1869923 1870858 R TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: tcx:Tcr_0112 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase complement(1869923..1870858) Thioalkalimicrobium cyclicum ALM1 10720471 YP_004537868.1 CDS Thicy_1632 NC_015581.1 1870955 1871482 D KEGG: tcx:Tcr_0111 hypothetical protein; hypothetical protein 1870955..1871482 Thioalkalimicrobium cyclicum ALM1 10720472 YP_004537869.1 CDS Thicy_1633 NC_015581.1 1871501 1872895 D PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: tcx:Tcr_0110 argininosuccinate lyase; argininosuccinate lyase 1871501..1872895 Thioalkalimicrobium cyclicum ALM1 10720473 YP_004537870.1 CDS Thicy_1634 NC_015581.1 1872906 1874738 R PFAM: Na/Pi-cotransporter; KEGG: aeh:Mlg_2701 Na+/Pi-cotransporter; Na+/Picotransporter complement(1872906..1874738) Thioalkalimicrobium cyclicum ALM1 10720474 YP_004537871.1 CDS Thicy_1635 NC_015581.1 1874735 1876918 R PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; KEGG: tcx:Tcr_0070 AMP-dependent synthetase and ligase; SMART: Phospholipid/glycerol acyltransferase; acyl-ACP--phospholipid O-acyltransferase complement(1874735..1876918) Thioalkalimicrobium cyclicum ALM1 10720475 YP_004537872.1 CDS Thicy_1636 NC_015581.1 1876915 1878198 R PFAM: Major facilitator superfamily MFS-1; KEGG: tcx:Tcr_0069 major facilitator transporter; major facilitator superfamily protein complement(1876915..1878198) Thioalkalimicrobium cyclicum ALM1 10720476 YP_004537873.1 CDS Thicy_1637 NC_015581.1 1878231 1879886 R KEGG: dar:Daro_4086 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; histidine kinase complement(1878231..1879886) Thioalkalimicrobium cyclicum ALM1 10720477 YP_004537874.1 CDS Thicy_1638 NC_015581.1 1879879 1881003 R PFAM: FIST domain, N-terminal; FIST C domain; KEGG: dsa:Desal_3758 domain of unknown function DUF1745; hypothetical protein complement(1879879..1881003) Thioalkalimicrobium cyclicum ALM1 10720478 YP_004537875.1 CDS Thicy_1639 NC_015581.1 1881184 1881672 D KEGG: vfm:VFMJ11_0119 transcription elongation factor GreB; TIGRFAM: Transcription elongation factor GreB, prokaryotic; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; transcription elongation factor GreB 1881184..1881672 Thioalkalimicrobium cyclicum ALM1 10720479 YP_004537876.1 CDS Thicy_1640 NC_015581.1 1881699 1883738 R KEGG: tcx:Tcr_0067 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; oligopeptidase A complement(1881699..1883738) Thioalkalimicrobium cyclicum ALM1 10720480 YP_004537877.1 CDS Thicy_1641 NC_015581.1 1883892 1884419 D KEGG: tcx:Tcr_0108 adenine phosphoribosyltransferase; HAMAP: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase; adenine phosphoribosyltransferase 1883892..1884419 Thioalkalimicrobium cyclicum ALM1 10720481 YP_004537878.1 CDS Thicy_1642 NC_015581.1 1884466 1885254 R PFAM: Protein of unknown function DUF81; KEGG: tcx:Tcr_2201 hypothetical protein; hypothetical protein complement(1884466..1885254) Thioalkalimicrobium cyclicum ALM1 10720482 YP_004537879.1 CDS Thicy_1643 NC_015581.1 1885325 1887001 R TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: tcx:Tcr_2197 60 kDa inner membrane insertion protein; PFAM: Membrane insertion protein, OxaA/YidC; membrane protein oxaA complement(1885325..1887001) Thioalkalimicrobium cyclicum ALM1 10720483 YP_004537880.1 CDS Thicy_1644 NC_015581.1 1886998 1887435 R TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: tcx:Tcr_2198 ribonuclease P protein component; PFAM: Ribonuclease P; Ribonuclease P protein component complement(1886998..1887435) Thioalkalimicrobium cyclicum ALM1 10720484 YP_004537881.1 CDS Thicy_1645 NC_015581.1 1887444 1887578 R TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: pmr:PMI3131 50S ribosomal protein L34; PFAM: Ribosomal protein L34; 50S ribosomal protein L34 complement(1887444..1887578) Thioalkalimicrobium cyclicum ALM1 10720485 YP_004537882.1 CDS Thicy_1646 NC_015581.1 1887703 1888836 D TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: tcx:Tcr_0003 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal; DNA replication and repair protein RecF 1887703..1888836 Thioalkalimicrobium cyclicum ALM1 10720486 YP_004537883.1 CDS Thicy_1647 NC_015581.1 1888908 1891343 D SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: tcx:Tcr_0012 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; DNA gyrase subunit B 1888908..1891343 Thioalkalimicrobium cyclicum ALM1 10720487 YP_004537884.1 CDS Thicy_1648 NC_015581.1 1891409 1892341 D KEGG: tcx:Tcr_0013 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase; phosphoribulokinase 1891409..1892341 Thioalkalimicrobium cyclicum ALM1 10720488 YP_004537885.1 CDS Thicy_1649 NC_015581.1 1892486 1893058 D hypothetical protein 1892486..1893058 Thioalkalimicrobium cyclicum ALM1 10720489 YP_004537886.1 CDS Thicy_1650 NC_015581.1 1893055 1894728 D KEGG: dsa:Desal_1367 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 1893055..1894728 Thioalkalimicrobium cyclicum ALM1 10720490 YP_004537887.1 CDS Thicy_1651 NC_015581.1 1894682 1895071 R KEGG: tcx:Tcr_0016 RNA-binding S4; PFAM: RNA-binding S4; SMART: RNA-binding S4; RNA-binding S4 domain-containing protein complement(1894682..1895071) Thioalkalimicrobium cyclicum ALM1 10720491 YP_004537888.1 CDS Thicy_1652 NC_015581.1 1895076 1896026 R HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: tcx:Tcr_0017 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; coproporphyrinogen-III oxidase, aerobic complement(1895076..1896026) Thioalkalimicrobium cyclicum ALM1 10720492 YP_004537889.1 CDS Thicy_1653 NC_015581.1 1896160 1896993 D PFAM: Peptidase M48, Ste24p; KEGG: tcx:Tcr_0018 peptidase M48, Ste24p; peptidase M48 Ste24p 1896160..1896993 Thioalkalimicrobium cyclicum ALM1 10720493 YP_004537890.1 CDS Thicy_1654 NC_015581.1 1896997 1897617 R TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: tcx:Tcr_0047 GTP-binding protein, HSR1-related; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein engB complement(1896997..1897617) Thioalkalimicrobium cyclicum ALM1 10720494 YP_004537891.1 CDS Thicy_1655 NC_015581.1 1897706 1899718 D PFAM: ResB-like; KEGG: tcx:Tcr_0048 ResB-like; ResB family protein 1897706..1899718 Thioalkalimicrobium cyclicum ALM1 10720495 YP_004537892.1 CDS Thicy_1656 NC_015581.1 1899731 1900924 D KEGG: tcx:Tcr_0049 cytochrome c assembly protein; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 1899731..1900924 Thioalkalimicrobium cyclicum ALM1 10720496 YP_004537893.1 CDS Thicy_1657 NC_015581.1 1900924 1901568 D PFAM: DSBA oxidoreductase; KEGG: tcx:Tcr_0050 DsbA oxidoreductase; DSBA oxidoreductase 1900924..1901568 Thioalkalimicrobium cyclicum ALM1 10720497 YP_004537894.1 CDS Thicy_1658 NC_015581.1 1901594 1903237 D KEGG: tcx:Tcr_0051 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; acetolactate synthase 1901594..1903237 Thioalkalimicrobium cyclicum ALM1 10720498 YP_004537895.1 CDS Thicy_1659 NC_015581.1 1903234 1903800 R PFAM: Nitroreductase-like; KEGG: tcx:Tcr_0053 nitroreductase; nitroreductase complement(1903234..1903800) Thioalkalimicrobium cyclicum ALM1 10720499 YP_004537896.1 CDS Thicy_1660 NC_015581.1 1904059 1904961 D PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: tcx:Tcr_0054 LysR family transcriptional regulator; LysR family transcriptional regulator 1904059..1904961 Thioalkalimicrobium cyclicum ALM1 10720500 YP_004537897.1 CDS Thicy_1661 NC_015581.1 1904961 1905770 D PFAM: VacJ-like lipoprotein; KEGG: tcx:Tcr_0055 VacJ-like lipoprotein; VacJ family lipoprotein 1904961..1905770 Thioalkalimicrobium cyclicum ALM1 10720501 YP_004537898.1 CDS Thicy_1662 NC_015581.1 1905751 1907124 D TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: tcx:Tcr_2195 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; tRNA modification GTPase mnmE 1905751..1907124 Thioalkalimicrobium cyclicum ALM1 10720502 YP_004537899.1 CDS Thicy_1663 NC_015581.1 1907140 1909101 D KEGG: tcx:Tcr_1337 choline/carnitine/betaine transport; TIGRFAM: BCCT transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter 1907140..1909101 Thioalkalimicrobium cyclicum ALM1 10720503 YP_004537900.1 CDS Thicy_1664 NC_015581.1 1909140 1909661 D PFAM: Sua5/YciO/YrdC, N-terminal; KEGG: dda:Dd703_0443 SUA5/YciO/YrdC domain protein; SUA5/yciO/yrdC domain-containing protein 1909140..1909661 Thioalkalimicrobium cyclicum ALM1 10720504 YP_004537901.1 CDS Thicy_1665 NC_015581.1 1909668 1911290 R PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_0315 iron ABC transporter, permease protein; ABC transporter permease complement(1909668..1911290) Thioalkalimicrobium cyclicum ALM1 10720505 YP_004537902.1 CDS Thicy_1666 NC_015581.1 1911321 1912355 R PFAM: Bacterial extracellular solute-binding, family 1; KEGG: rma:Rmag_0706 extracellular solute-binding protein; extracellular solute-binding protein complement(1911321..1912355) Thioalkalimicrobium cyclicum ALM1 10720506 YP_004537903.1 CDS Thicy_1667 NC_015581.1 1912439 1913101 R PFAM: ABC transporter-like; KEGG: ABC transporter related protein; SMART: ATPase, AAA+ type, core; Fe(3+)-transporting ATPase complement(1912439..1913101) Thioalkalimicrobium cyclicum ALM1 10720507 YP_004537904.1 CDS Thicy_1668 NC_015581.1 1913234 1914850 R KEGG: tcx:Tcr_0071 hypothetical protein; hypothetical protein complement(1913234..1914850) Thioalkalimicrobium cyclicum ALM1 10720508 YP_004537905.1 CDS Thicy_1669 NC_015581.1 1914844 1916790 R KEGG: tcx:Tcr_0072 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; von Willebrand factor, type A; SMART: Tetratricopeptide repeat; hypothetical protein complement(1914844..1916790) Thioalkalimicrobium cyclicum ALM1 10720509 YP_004537906.1 CDS Thicy_1670 NC_015581.1 1916783 1917817 R KEGG: tcx:Tcr_0073 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; von Willebrand factor type A complement(1916783..1917817) Thioalkalimicrobium cyclicum ALM1 10720510 YP_004537907.1 CDS Thicy_1671 NC_015581.1 1917814 1918302 R KEGG: tcx:Tcr_0074 hypothetical protein; hypothetical protein complement(1917814..1918302) Thioalkalimicrobium cyclicum ALM1 10720511 YP_004537908.1 CDS Thicy_1672 NC_015581.1 1918299 1919222 R PFAM: Protein of unknown function DUF58; KEGG: tcx:Tcr_0075 hypothetical protein; hypothetical protein complement(1918299..1919222) Thioalkalimicrobium cyclicum ALM1 10720512 YP_004537909.1 CDS Thicy_1673 NC_015581.1 1919224 1920192 R PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: sde:Sde_1747 MoxR-like ATPase; ATPase complement(1919224..1920192) Thioalkalimicrobium cyclicum ALM1 10720513 YP_004537910.1 CDS Thicy_1674 NC_015581.1 1920278 1921282 R TIGRFAM: tRNA (mo5U34)-methyltransferase; HAMAP: tRNA (mo5U34)-methyltransferase; KEGG: tcx:Tcr_0078 methyltransferase, putative; PFAM: tRNA (mo5U34)-methyltransferase; tRNA (mo5U34)-methyltransferase complement(1920278..1921282) Thioalkalimicrobium cyclicum ALM1 10720514 YP_004537911.1 CDS Thicy_1675 NC_015581.1 1921291 1922025 R TIGRFAM: tRNA (cmo5U34)-methyltransferase; HAMAP: tRNA (cmo5U34)-methyltransferase; KEGG: tcx:Tcr_0079 methyltransferase; PFAM: Methyltransferase type 12; tRNA (cmo5U34)-methyltransferase complement(1921291..1922025) Thioalkalimicrobium cyclicum ALM1 10720515 YP_004537912.1 CDS Thicy_1676 NC_015581.1 1922108 1923016 R PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: svo:SVI_3483 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1922108..1923016) Thioalkalimicrobium cyclicum ALM1 10720516 YP_004537913.1 CDS Thicy_1677 NC_015581.1 1923117 1923812 D PFAM: Pirin, N-terminal; KEGG: apa:APP7_1553 hypothetical protein; Pirin domain-containing protein 1923117..1923812 Thioalkalimicrobium cyclicum ALM1 10720517 YP_004537914.1 CDS Thicy_1678 NC_015581.1 1923850 1924383 D PFAM: NADPH-dependent FMN reductase; KEGG: pap:PSPA7_4174 hypothetical protein; NADPH-dependent FMN reductase 1923850..1924383 Thioalkalimicrobium cyclicum ALM1 10720518 YP_004537915.1 CDS Thicy_1679 NC_015581.1 1924380 1925531 R PFAM: Lytic transglycosylase-like, catalytic; KEGG: lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit complement(1924380..1925531) Thioalkalimicrobium cyclicum ALM1 10720519 YP_004537916.1 CDS Thicy_1680 NC_015581.1 1925601 1926020 D KEGG: btk:BT9727_4471 hypothetical protein; hypothetical protein 1925601..1926020 Thioalkalimicrobium cyclicum ALM1 10720520 YP_004537917.1 CDS Thicy_1681 NC_015581.1 1926113 1928227 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: hha:Hhal_0389 TonB-dependent receptor; TonB-dependent receptor 1926113..1928227 Thioalkalimicrobium cyclicum ALM1 10720521 YP_004537918.1 CDS Thicy_1682 NC_015581.1 1928263 1930476 D PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: tcx:Tcr_2015 TonB-dependent receptor; TonB-dependent receptor 1928263..1930476 Thioalkalimicrobium cyclicum ALM1 10720522 YP_004537919.1 CDS Thicy_1683 NC_015581.1 1930507 1931334 R KEGG: nhl:Nhal_3061 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; DNA/RNA non-specific endonuclease complement(1930507..1931334) Thioalkalimicrobium cyclicum ALM1 10720523 YP_004537920.1 CDS Thicy_1684 NC_015581.1 1931478 1932281 R PFAM: Methyltransferase type 11; KEGG: tcx:Tcr_0084 SmtA protein; type 11 methyltransferase complement(1931478..1932281) Thioalkalimicrobium cyclicum ALM1 10720524 Thicy_R0001 tRNA Thicy_R0001 NC_015581.1 13114 13194 R tRNA-Leu complement(13114..13194) Thioalkalimicrobium cyclicum ALM1 10718804 Thicy_R0002 tRNA Thicy_R0002 NC_015581.1 13240 13315 R tRNA-Phe complement(13240..13315) Thioalkalimicrobium cyclicum ALM1 10718805 Thicy_R0003 tRNA Thicy_R0003 NC_015581.1 113934 114018 D tRNA-Tyr 113934..114018 Thioalkalimicrobium cyclicum ALM1 10718898 Thicy_R0004 tRNA Thicy_R0004 NC_015581.1 114027 114101 D tRNA-Gly 114027..114101 Thioalkalimicrobium cyclicum ALM1 10718899 Thicy_R0005 tRNA Thicy_R0005 NC_015581.1 114122 114197 D tRNA-Thr 114122..114197 Thioalkalimicrobium cyclicum ALM1 10718900 Thicy_R0006 tRNA Thicy_R0006 NC_015581.1 115494 115570 D tRNA-Trp 115494..115570 Thioalkalimicrobium cyclicum ALM1 10718902 Thicy_R0008 tRNA Thicy_R0008 NC_015581.1 262584 262660 D tRNA-Ile 262584..262660 Thioalkalimicrobium cyclicum ALM1 10719058 Thicy_R0009 tRNA Thicy_R0009 NC_015581.1 262664 262739 D tRNA-Ala 262664..262739 Thioalkalimicrobium cyclicum ALM1 10719059 Thicy_R0012 tRNA Thicy_R0012 NC_015581.1 268169 268244 D tRNA-Thr 268169..268244 Thioalkalimicrobium cyclicum ALM1 10719064 Thicy_R0013 tRNA Thicy_R0013 NC_015581.1 636002 636094 D tRNA-Ser 636002..636094 Thioalkalimicrobium cyclicum ALM1 10719306 Thicy_R0014 tRNA Thicy_R0014 NC_015581.1 636171 636247 D tRNA-Arg 636171..636247 Thioalkalimicrobium cyclicum ALM1 10719307 Thicy_R0016 tRNA Thicy_R0016 NC_015581.1 667059 667136 D tRNA-Pro 667059..667136 Thioalkalimicrobium cyclicum ALM1 10719332 Thicy_R0017 tRNA Thicy_R0017 NC_015581.1 667185 667261 D tRNA-Arg 667185..667261 Thioalkalimicrobium cyclicum ALM1 10719333 Thicy_R0018 tRNA Thicy_R0018 NC_015581.1 667282 667357 D tRNA-His 667282..667357 Thioalkalimicrobium cyclicum ALM1 10719334 Thicy_R0020 tRNA Thicy_R0020 NC_015581.1 745377 745453 D tRNA-Ile 745377..745453 Thioalkalimicrobium cyclicum ALM1 10719411 Thicy_R0021 tRNA Thicy_R0021 NC_015581.1 745457 745532 D tRNA-Ala 745457..745532 Thioalkalimicrobium cyclicum ALM1 10719412 Thicy_R0024 tRNA Thicy_R0024 NC_015581.1 781334 781418 D tRNA-Leu 781334..781418 Thioalkalimicrobium cyclicum ALM1 10719448 Thicy_R0025 tRNA Thicy_R0025 NC_015581.1 796245 796321 D tRNA-Met 796245..796321 Thioalkalimicrobium cyclicum ALM1 10719464 Thicy_R0026 tRNA Thicy_R0026 NC_015581.1 802038 802114 R tRNA-Val complement(802038..802114) Thioalkalimicrobium cyclicum ALM1 10719471 Thicy_R0027 tRNA Thicy_R0027 NC_015581.1 802142 802228 R tRNA-Leu complement(802142..802228) Thioalkalimicrobium cyclicum ALM1 10719472 Thicy_R0028 tRNA Thicy_R0028 NC_015581.1 808432 808507 D tRNA-Val 808432..808507 Thioalkalimicrobium cyclicum ALM1 10719477 Thicy_R0029 tRNA Thicy_R0029 NC_015581.1 808514 808590 D tRNA-Asp 808514..808590 Thioalkalimicrobium cyclicum ALM1 10719478 Thicy_R0030 tRNA Thicy_R0030 NC_015581.1 808689 808764 D tRNA-Val 808689..808764 Thioalkalimicrobium cyclicum ALM1 10719479 Thicy_R0031 tRNA Thicy_R0031 NC_015581.1 808771 808847 D tRNA-Asp 808771..808847 Thioalkalimicrobium cyclicum ALM1 10719480 Thicy_R0032 tRNA Thicy_R0032 NC_015581.1 902055 902130 D tRNA-Ala 902055..902130 Thioalkalimicrobium cyclicum ALM1 10719572 Thicy_R0033 tRNA Thicy_R0033 NC_015581.1 902154 902229 D tRNA-Glu 902154..902229 Thioalkalimicrobium cyclicum ALM1 10719573 Thicy_R0034 tRNA Thicy_R0034 NC_015581.1 902232 902307 D tRNA-Gly 902232..902307 Thioalkalimicrobium cyclicum ALM1 10719574 Thicy_R0035 tRNA Thicy_R0035 NC_015581.1 902361 902436 D tRNA-Glu 902361..902436 Thioalkalimicrobium cyclicum ALM1 10719575 Thicy_R0036 tRNA Thicy_R0036 NC_015581.1 914390 914465 D tRNA-Gly 914390..914465 Thioalkalimicrobium cyclicum ALM1 10719587 Thicy_R0037 tRNA Thicy_R0037 NC_015581.1 914471 914544 D tRNA-Cys 914471..914544 Thioalkalimicrobium cyclicum ALM1 10719588 Thicy_R0038 tRNA Thicy_R0038 NC_015581.1 914588 914674 D tRNA-Leu 914588..914674 Thioalkalimicrobium cyclicum ALM1 10719589 Thicy_R0039 tRNA Thicy_R0039 NC_015581.1 1120077 1120153 R tRNA-Pro complement(1120077..1120153) Thioalkalimicrobium cyclicum ALM1 10719800 Thicy_R0040 tRNA Thicy_R0040 NC_015581.1 1124243 1124333 R tRNA-Ser complement(1124243..1124333) Thioalkalimicrobium cyclicum ALM1 10719806 Thicy_R0041 tRNA Thicy_R0041 NC_015581.1 1165186 1165261 R tRNA-Lys complement(1165186..1165261) Thioalkalimicrobium cyclicum ALM1 10719842 Thicy_R0043 tRNA Thicy_R0043 NC_015581.1 1364740 1364830 R tRNA-Ser complement(1364740..1364830) Thioalkalimicrobium cyclicum ALM1 10720029 Thicy_R0045 tRNA Thicy_R0045 NC_015581.1 1524153 1524225 D tRNA-Arg 1524153..1524225 Thioalkalimicrobium cyclicum ALM1 10720174 Thicy_R0047 tRNA Thicy_R0047 NC_015581.1 1540863 1540939 R tRNA-Met complement(1540863..1540939) Thioalkalimicrobium cyclicum ALM1 10720191 Thicy_R0048 tRNA Thicy_R0048 NC_015581.1 1551712 1551787 D tRNA-Asn 1551712..1551787 Thioalkalimicrobium cyclicum ALM1 10720203 Thicy_R0049 tRNA Thicy_R0049 NC_015581.1 1559691 1559767 R tRNA-Met complement(1559691..1559767) Thioalkalimicrobium cyclicum ALM1 10720211 Thicy_R0050 tRNA Thicy_R0050 NC_015581.1 1563361 1563435 R tRNA-Gln complement(1563361..1563435) Thioalkalimicrobium cyclicum ALM1 10720216 Thicy_R0051 tRNA Thicy_R0051 NC_015581.1 1626382 1626456 D tRNA-Arg 1626382..1626456 Thioalkalimicrobium cyclicum ALM1 10720276 Thicy_R0007 rRNA Thicy_R0007 NC_015581.1 260958 262485 D 16S ribosomal RNA 260958..262485 Thioalkalimicrobium cyclicum ALM1 10719057 Thicy_R0010 rRNA Thicy_R0010 NC_015581.1 263129 266087 D 23S ribosomal RNA 263129..266087 Thioalkalimicrobium cyclicum ALM1 10719060 Thicy_R0011 rRNA Thicy_R0011 NC_015581.1 266229 266344 D 5S ribosomal RNA 266229..266344 Thioalkalimicrobium cyclicum ALM1 10719061 Thicy_R0019 rRNA Thicy_R0019 NC_015581.1 743751 745278 D 16S ribosomal RNA 743751..745278 Thioalkalimicrobium cyclicum ALM1 10719410 Thicy_R0022 rRNA Thicy_R0022 NC_015581.1 745922 748881 D 23S ribosomal RNA 745922..748881 Thioalkalimicrobium cyclicum ALM1 10719413 Thicy_R0023 rRNA Thicy_R0023 NC_015581.1 749023 749138 D 5S ribosomal RNA 749023..749138 Thioalkalimicrobium cyclicum ALM1 10719414