-- dump date 20111121_015416 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 595494000001 SEQ_END SEQ_END NC_012691.1 3471292 3471292 DR NC_012691.1; contig end 3471292..3471292 Tolumonas auensis DSM 9187 YP_002891217.1 CDS Tola_0001 NC_012691.1 12 1397 D KEGG: asa:ASA_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 12..1397 Tolumonas auensis DSM 9187 7883396 YP_002891218.1 CDS Tola_0002 NC_012691.1 1416 2519 D KEGG: asa:ASA_0002 DNA polymerase III beta-subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 1416..2519 Tolumonas auensis DSM 9187 7883559 YP_002891219.1 CDS Tola_0003 NC_012691.1 2525 3598 D TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: aha:AHA_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF 2525..3598 Tolumonas auensis DSM 9187 7883560 YP_002891220.1 CDS Tola_0004 NC_012691.1 3619 6036 D KEGG: aha:AHA_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 3619..6036 Tolumonas auensis DSM 9187 7883561 YP_002891221.1 CDS Tola_0005 NC_012691.1 6230 7243 D PFAM: extracellular solute-binding protein family 1; KEGG: psa:PST_0371 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative; extracellular solute-binding protein 6230..7243 Tolumonas auensis DSM 9187 7883562 YP_002891222.1 CDS Tola_0006 NC_012691.1 7240 9666 D KEGG: psp:PSPPH_4065 GGDEF domain/EAL domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 7240..9666 Tolumonas auensis DSM 9187 7883563 YP_002891223.1 CDS avtA NC_012691.1 9727 10968 R transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase complement(9727..10968) Tolumonas auensis DSM 9187 7883564 YP_002891224.1 CDS Tola_0008 NC_012691.1 11074 13146 R KEGG: eck:EC55989_4013 glycine tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(11074..13146) Tolumonas auensis DSM 9187 7883565 YP_002891225.1 CDS glyQ NC_012691.1 13160 14074 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(13160..14074) Tolumonas auensis DSM 9187 7883566 YP_002891226.1 CDS Tola_0010 NC_012691.1 14180 14755 D KEGG: aha:AHA_0129 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 14180..14755 Tolumonas auensis DSM 9187 7883567 YP_002891227.1 CDS zntB NC_012691.1 14771 15787 D PFAM: Mg2 transporter protein CorA family protein; KEGG: ypb:YPTS_2334 Mg2 transporter protein CorA family protein; zinc transporter 14771..15787 Tolumonas auensis DSM 9187 7883568 YP_002891228.1 CDS Tola_0012 NC_012691.1 15905 16906 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: asa:ASA_0593 ABC-type sulfate transport system, periplasmic component; sulfate ABC transporter, periplasmic sulfate-binding protein 15905..16906 Tolumonas auensis DSM 9187 7883569 YP_002891229.1 CDS Tola_0013 NC_012691.1 16969 17496 D PFAM: protein of unknown function DUF1234; KEGG: aha:AHA_0605 hypothetical protein; hypothetical protein 16969..17496 Tolumonas auensis DSM 9187 7883570 YP_002891230.1 CDS Tola_0014 NC_012691.1 17735 18571 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_0606 sulfate/thiosulfate ABC transporter, permease protein CysT; sulfate ABC transporter, inner membrane subunit CysT 17735..18571 Tolumonas auensis DSM 9187 7883571 YP_002891231.1 CDS Tola_0015 NC_012691.1 18571 19386 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_0607 sulfate/thiosulfate ABC transporter, permease protein CysW; sulfate ABC transporter, inner membrane subunit CysW 18571..19386 Tolumonas auensis DSM 9187 7883572 YP_002891232.1 CDS Tola_0016 NC_012691.1 19404 20489 D KEGG: aha:AHA_0608 sulfate/thiosulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 19404..20489 Tolumonas auensis DSM 9187 7883573 YP_002891233.1 CDS cbl NC_012691.1 20486 21442 D LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; transcriptional regulator Cbl 20486..21442 Tolumonas auensis DSM 9187 7883574 YP_002891234.1 CDS Tola_0018 NC_012691.1 21483 21731 R PFAM: SirA family protein; KEGG: ypb:YPTS_0229 SirA family protein; SirA family protein complement(21483..21731) Tolumonas auensis DSM 9187 7883892 YP_002891235.1 CDS Tola_0019 NC_012691.1 21771 23024 R PFAM: extracellular solute-binding protein family 1; KEGG: aha:AHA_0135 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein complement(21771..23024) Tolumonas auensis DSM 9187 7883893 YP_002891236.1 CDS Tola_0020 NC_012691.1 23028 24437 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aha:AHA_0136 signal transduction histidine kinase; histidine kinase complement(23028..24437) Tolumonas auensis DSM 9187 7883894 YP_002891237.1 CDS Tola_0021 NC_012691.1 24490 25212 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: asa:ASA_4252 two-component system response regulator; two component transcriptional regulator, winged helix family complement(24490..25212) Tolumonas auensis DSM 9187 7883895 YP_002891238.1 CDS Tola_0022 NC_012691.1 25420 25944 D KEGG: asa:ASA_4245 protoporphyrinogen oxidase; Protoporphyrinogen oxidase 25420..25944 Tolumonas auensis DSM 9187 7883896 YP_002891239.1 CDS Tola_0023 NC_012691.1 31726 32523 D KEGG: aeh:Mlg_2795 Mn2+-dependent serine/threonine protein kinase; hypothetical protein 31726..32523 Tolumonas auensis DSM 9187 7883903 YP_002891240.1 CDS Tola_0024 NC_012691.1 32561 33280 R PFAM: Integrase catalytic region; KEGG: vsp:VS_1873 transposase (orfB) of insertion sequence ISVisp1 ; IS3 family subgroup IS3; integrase catalytic subunit complement(32561..33280) Tolumonas auensis DSM 9187 7883904 YP_002891241.1 CDS Tola_0025 NC_012691.1 33397 33741 R PFAM: transposase IS3/IS911 family protein; KEGG: abo:ABO_1787 transposase, OrfA; transposase IS3/IS911 family protein complement(33397..33741) Tolumonas auensis DSM 9187 7883905 YP_002891242.1 CDS Tola_0026 NC_012691.1 33812 34897 R PFAM: glycosyl transferase group 1; KEGG: hip:CGSHiEE_00235 lipooligosaccharide glycosyl transferase G; group 1 glycosyl transferase complement(33812..34897) Tolumonas auensis DSM 9187 7883906 YP_002891243.1 CDS Tola_0027 NC_012691.1 34936 35970 R PFAM: glycosyl transferase group 1; KEGG: mmw:Mmwyl1_3481 glycosyl transferase group 1; group 1 glycosyl transferase complement(34936..35970) Tolumonas auensis DSM 9187 7883907 YP_002891244.1 CDS Tola_0028 NC_012691.1 36034 36819 R PFAM: glycosyl transferase family 2; KEGG: pmu:PM1306 hypothetical protein; family 2 glycosyl transferase complement(36034..36819) Tolumonas auensis DSM 9187 7883908 YP_002891245.1 CDS Tola_0029 NC_012691.1 36812 37879 R PFAM: glycosyl transferase family 9; KEGG: asa:ASA_0037 ADP-heptose--LPS heptosyltransferase III; glycosyl transferase family protein complement(36812..37879) Tolumonas auensis DSM 9187 7883909 YP_002891246.1 CDS Tola_0030 NC_012691.1 37983 39008 R TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: asa:ASA_4220 ADP-heptose-LPS heptosyltransferase II; lipopolysaccharide heptosyltransferase II complement(37983..39008) Tolumonas auensis DSM 9187 7883910 YP_002891247.1 CDS Tola_0031 NC_012691.1 39008 40258 R PFAM: O-antigen polymerase; KEGG: msu:MS0243 RfaL protein; O-antigen polymerase complement(39008..40258) Tolumonas auensis DSM 9187 7883911 YP_002891248.1 CDS Tola_0032 NC_012691.1 40343 41296 R TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: aha:AHA_4232 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(40343..41296) Tolumonas auensis DSM 9187 7883912 YP_002891249.1 CDS Tola_0033 NC_012691.1 41396 42505 R with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein complement(41396..42505) Tolumonas auensis DSM 9187 7883913 YP_002891250.1 CDS Tola_0034 NC_012691.1 42652 43527 R PFAM: Maltose operon periplasmic; KEGG: yen:YE3861 maltose regulon periplasmic protein; maltose regulon periplasmic protein complement(42652..43527) Tolumonas auensis DSM 9187 7883914 YP_002891251.1 CDS lamB NC_012691.1 43594 44829 R porin involved in the transport of maltose and maltodextrins; maltoporin complement(43594..44829) Tolumonas auensis DSM 9187 7883915 YP_002891252.1 CDS Tola_0036 NC_012691.1 44902 46011 R with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein complement(44902..46011) Tolumonas auensis DSM 9187 7883916 YP_002891253.1 CDS malE NC_012691.1 46482 47663 D functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein 46482..47663 Tolumonas auensis DSM 9187 7883917 YP_002891254.1 CDS malF NC_012691.1 47733 49319 D with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 47733..49319 Tolumonas auensis DSM 9187 7883918 YP_002891255.1 CDS malG NC_012691.1 49331 50221 D with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease 49331..50221 Tolumonas auensis DSM 9187 7883919 YP_002891256.1 CDS Tola_0040 NC_012691.1 50378 50647 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sbn:Sbal195_4669 prevent-host-death family protein; prevent-host-death family protein 50378..50647 Tolumonas auensis DSM 9187 7883920 YP_002891257.1 CDS Tola_0041 NC_012691.1 50631 50963 D PFAM: plasmid stabilization system; KEGG: sbn:Sbal195_4670 plasmid stabilization system protein; plasmid stabilization system 50631..50963 Tolumonas auensis DSM 9187 7883921 YP_002891258.1 CDS Tola_0042 NC_012691.1 51060 52019 D PFAM: beta-lactamase domain protein; KEGG: mxa:MXAN_0965 hypothetical protein; beta-lactamase domain-containing protein 51060..52019 Tolumonas auensis DSM 9187 7883922 YP_002891259.1 CDS malQ NC_012691.1 52148 54268 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(52148..54268) Tolumonas auensis DSM 9187 7883923 YP_002891260.1 CDS Tola_0044 NC_012691.1 54278 56713 R KEGG: ypb:YPTS_3971 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(54278..56713) Tolumonas auensis DSM 9187 7883924 YP_002891261.1 CDS Tola_0045 NC_012691.1 56970 59690 D Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 56970..59690 Tolumonas auensis DSM 9187 7883925 YP_002891262.1 CDS Tola_0046 NC_012691.1 59739 60653 R PFAM: ROK family protein; KEGG: yen:YE3185 fructokinase; ROK family protein complement(59739..60653) Tolumonas auensis DSM 9187 7883926 YP_002891263.1 CDS Tola_0047 NC_012691.1 60767 61507 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: spe:Spro_1035 two component transcriptional regulator; two component transcriptional regulator, winged helix family 60767..61507 Tolumonas auensis DSM 9187 7883927 YP_002891264.1 CDS Tola_0048 NC_012691.1 61508 62533 R PFAM: PfkB domain protein; KEGG: spe:Spro_1034 ribokinase-like domain-containing protein; PfkB domain-containing protein complement(61508..62533) Tolumonas auensis DSM 9187 7883928 YP_002891265.1 CDS Tola_0049 NC_012691.1 62533 63393 R KEGG: ent:Ent638_0285 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; hypothetical protein complement(62533..63393) Tolumonas auensis DSM 9187 7883929 YP_002891266.1 CDS Tola_0050 NC_012691.1 63406 64095 R PFAM: protein of unknown function DUF1498; KEGG: yps:YPTB3804 hypothetical protein; hypothetical protein complement(63406..64095) Tolumonas auensis DSM 9187 7883930 YP_002891267.1 CDS Tola_0051 NC_012691.1 64096 65541 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ent:Ent638_0157 xylulokinase; xylulokinase complement(64096..65541) Tolumonas auensis DSM 9187 7883931 YP_002891268.1 CDS Tola_0052 NC_012691.1 65651 66592 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecs:ECs5071 putative carbohydrate binding protein; periplasmic binding protein/LacI transcriptional regulator complement(65651..66592) Tolumonas auensis DSM 9187 7883932 YP_002891269.1 CDS Tola_0053 NC_012691.1 66666 67667 R PFAM: inner-membrane translocator; KEGG: kpe:KPK_5180 putative ribose ABC transporter, permease protein; inner-membrane translocator complement(66666..67667) Tolumonas auensis DSM 9187 7883933 YP_002891270.1 CDS Tola_0054 NC_012691.1 67681 69204 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_0289 ABC transporter related; ABC transporter complement(67681..69204) Tolumonas auensis DSM 9187 7883934 YP_002891271.1 CDS Tola_0055 NC_012691.1 69362 71980 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein; KEGG: spe:Spro_1028 multi-sensor hybrid histidine kinase; histidine kinase 69362..71980 Tolumonas auensis DSM 9187 7883935 YP_002891272.1 CDS Tola_0056 NC_012691.1 72198 72446 D KEGG: asa:ASA_1294 outer membrane lipoprotein; outer membrane lipoprotein 72198..72446 Tolumonas auensis DSM 9187 7883936 YP_002891273.1 CDS Tola_0057 NC_012691.1 72691 73614 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: aha:AHA_3584 LysM domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein complement(72691..73614) Tolumonas auensis DSM 9187 7883937 YP_002891274.1 CDS Tola_0058 NC_012691.1 73906 77298 D KEGG: aha:AHA_3976 exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; exodeoxyribonuclease V subunit gamma 73906..77298 Tolumonas auensis DSM 9187 7883938 YP_002891275.1 CDS Tola_0059 NC_012691.1 77295 80822 D KEGG: spe:Spro_3814 exonuclease V subunit beta; TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 77295..80822 Tolumonas auensis DSM 9187 7883939 YP_002891276.1 CDS Tola_0060 NC_012691.1 80819 82717 D KEGG: aha:AHA_3974 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 80819..82717 Tolumonas auensis DSM 9187 7883940 YP_002891277.1 CDS Tola_0061 NC_012691.1 82880 83773 D KEGG: aha:AHA_3949 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 82880..83773 Tolumonas auensis DSM 9187 7883941 YP_002891278.1 CDS Tola_0062 NC_012691.1 83843 84997 R PFAM: aminotransferase class I and II; KEGG: pag:PLES_36731 putative aminotransferase; GntR family transcriptional regulator complement(83843..84997) Tolumonas auensis DSM 9187 7883942 YP_002891279.1 CDS Tola_0063 NC_012691.1 85130 85627 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcr:BCAH187_A2582 transcriptional regulator, MarR family; transcriptional regulator, MarR family 85130..85627 Tolumonas auensis DSM 9187 7883943 YP_002891280.1 CDS Tola_0064 NC_012691.1 85677 87146 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: slo:Shew_0604 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(85677..87146) Tolumonas auensis DSM 9187 7883944 YP_002891281.1 CDS Tola_0065 NC_012691.1 87219 88628 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: asa:ASA_3744 ATP-dependent RNA helicase DbpA; DEAD/DEAH box helicase complement(87219..88628) Tolumonas auensis DSM 9187 7883945 YP_002891282.1 CDS Tola_0066 NC_012691.1 88973 89734 D PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: aha:AHA_1651 glycerol-3-phosphate regulon repressor; Cro/CI family transcriptional regulator 88973..89734 Tolumonas auensis DSM 9187 7883946 YP_002891283.1 CDS glpD NC_012691.1 89950 91491 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(89950..91491) Tolumonas auensis DSM 9187 7883947 YP_002891284.1 CDS Tola_0068 NC_012691.1 91663 93156 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: asa:ASA_2710 glycerol kinase; glycerol kinase complement(91663..93156) Tolumonas auensis DSM 9187 7883948 YP_002891285.1 CDS Tola_0069 NC_012691.1 93324 93491 R KEGG: aha:AHA_0716 hypothetical protein; hypothetical protein complement(93324..93491) Tolumonas auensis DSM 9187 7883949 YP_002891286.1 CDS Tola_0070 NC_012691.1 93545 94498 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: asa:ASA_0714 quinone oxidoreductase; Alcohol dehydrogenase zinc-binding domain-containing protein 93545..94498 Tolumonas auensis DSM 9187 7883950 YP_002891287.1 CDS Tola_0071 NC_012691.1 94499 95107 D TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cja:CJA_3014 hypothetical protein; beta-phosphoglucomutase family hydrolase 94499..95107 Tolumonas auensis DSM 9187 7883951 YP_002891288.1 CDS Tola_0072 NC_012691.1 95247 97280 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pst:PSPTO_5415 rhs element Vgr protein; ImpA family type VI secretion-associated protein 95247..97280 Tolumonas auensis DSM 9187 7883952 YP_002891289.1 CDS Tola_0073 NC_012691.1 97280 98143 D KEGG: vfm:VFMJ11_A1068 hypothetical protein; hypothetical protein 97280..98143 Tolumonas auensis DSM 9187 7883953 YP_002891290.1 CDS Tola_0074 NC_012691.1 98146 99360 D KEGG: esa:ESA_00293 hypothetical protein; hypothetical protein 98146..99360 Tolumonas auensis DSM 9187 7883954 YP_002891291.1 CDS Tola_0075 NC_012691.1 99357 99872 D KEGG: ses:SARI_02597 hypothetical protein; hypothetical protein 99357..99872 Tolumonas auensis DSM 9187 7883955 YP_002891292.1 CDS Tola_0076 NC_012691.1 99965 100525 R PFAM: transferase hexapeptide repeat containing protein; KEGG: aha:AHA_0748 carbonic anhydrase; transferase hexapeptide repeat containing protein complement(99965..100525) Tolumonas auensis DSM 9187 7883956 YP_002891293.1 CDS Tola_0077 NC_012691.1 100742 101848 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: asa:ASA_0434 hypothetical protein; cobalamin synthesis protein P47K complement(100742..101848) Tolumonas auensis DSM 9187 7883957 YP_002891294.1 CDS Tola_0078 NC_012691.1 101980 102168 R KEGG: hypothetical protein LOC690456; hypothetical protein complement(101980..102168) Tolumonas auensis DSM 9187 7883958 YP_002891295.1 CDS Tola_0079 NC_012691.1 102315 102755 R PFAM: UspA domain protein; KEGG: asa:ASA_0046 universal stress protein A; UspA domain-containing protein complement(102315..102755) Tolumonas auensis DSM 9187 7883959 YP_002891296.1 CDS Tola_0080 NC_012691.1 102770 104632 R TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: asa:ASA_3987 glutathione-regulated potassium efflux system protein KefC; potassium efflux system protein complement(102770..104632) Tolumonas auensis DSM 9187 7883960 YP_002891297.1 CDS Tola_0081 NC_012691.1 104632 105228 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: asa:ASA_3986 glutathione-regulated potassium-efflux system ancillary protein KefG; NAD(P)H dehydrogenase (quinone) complement(104632..105228) Tolumonas auensis DSM 9187 7883961 YP_002891298.1 CDS Tola_0082 NC_012691.1 105462 107528 D PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: asa:ASA_3983 protease II; oligopeptidase B 105462..107528 Tolumonas auensis DSM 9187 7883962 YP_002891299.1 CDS Tola_0083 NC_012691.1 107633 107932 D PFAM: conserved hypothetical protein; KEGG: asa:ASA_3969 hypothetical protein; hypothetical protein 107633..107932 Tolumonas auensis DSM 9187 7883963 YP_002891300.1 CDS Tola_0084 NC_012691.1 108762 109361 R TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase; KEGG: ypm:YP_1536 TrpR binding protein WrbA; flavoprotein WrbA complement(108762..109361) Tolumonas auensis DSM 9187 7883964 YP_002891301.1 CDS Tola_0085 NC_012691.1 109528 109899 R TIGRFAM: phage shock protein C; PFAM: PspC domain protein; KEGG: hch:HCH_05445 phage shock protein PspC; phage shock protein C, PspC complement(109528..109899) Tolumonas auensis DSM 9187 7883965 YP_002891302.1 CDS pspB NC_012691.1 109913 110170 R acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B complement(109913..110170) Tolumonas auensis DSM 9187 7883966 YP_002891303.1 CDS Tola_0087 NC_012691.1 110170 110844 R TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; KEGG: hch:HCH_05443 phage shock protein A (IM30), suppresses sigma54-dependent transcription; phage shock protein A, PspA complement(110170..110844) Tolumonas auensis DSM 9187 7883967 YP_002891304.1 CDS Tola_0088 NC_012691.1 111021 112055 D KEGG: hch:HCH_05441 psp operon transcription activator PspF (sigma 54-dependent); TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Fis family sigma-54 specific transcriptional activator PspF 111021..112055 Tolumonas auensis DSM 9187 7883968 YP_002891305.1 CDS Tola_0089 NC_012691.1 112630 112872 D KEGG: aha:AHA_0359 hypothetical protein; hypothetical protein 112630..112872 Tolumonas auensis DSM 9187 7883969 YP_002891306.1 CDS Tola_0090 NC_012691.1 112938 113480 R KEGG: ppu:PP_0737 hypothetical protein; hypothetical protein complement(112938..113480) Tolumonas auensis DSM 9187 7883970 YP_002891307.1 CDS Tola_0091 NC_012691.1 113665 114252 D PFAM: multiple antibiotic resistance (MarC)-related protein; Integral membrane protein TerC; KEGG: asa:ASA_3972 multiple antibiotic resistance protein MarC; multiple antibiotic resistance (MarC)-like protein 113665..114252 Tolumonas auensis DSM 9187 7883971 YP_002891308.1 CDS Tola_0092 NC_012691.1 114313 116946 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(114313..116946) Tolumonas auensis DSM 9187 7883972 YP_002891309.1 CDS Tola_0093 NC_012691.1 117076 118221 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase complement(117076..118221) Tolumonas auensis DSM 9187 7886081 YP_002891310.1 CDS argC NC_012691.1 118465 119472 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 118465..119472 Tolumonas auensis DSM 9187 7886082 YP_002891311.1 CDS Tola_0095 NC_012691.1 119490 120272 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 119490..120272 Tolumonas auensis DSM 9187 7886083 YP_002891312.1 CDS Tola_0096 NC_012691.1 120299 121210 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 120299..121210 Tolumonas auensis DSM 9187 7886084 YP_002891313.1 CDS Tola_0097 NC_012691.1 121300 122685 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 121300..122685 Tolumonas auensis DSM 9187 7886085 YP_002891314.1 CDS Tola_0098 NC_012691.1 122972 123283 D TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: aha:AHA_0308 ribosomal protein S10; 30S ribosomal protein S10 122972..123283 Tolumonas auensis DSM 9187 7886086 YP_002891315.1 CDS Tola_0099 NC_012691.1 123306 123944 D PFAM: ribosomal protein L3; KEGG: aha:AHA_0309 ribosomal protein L3; 50S ribosomal protein L3 123306..123944 Tolumonas auensis DSM 9187 7886087 YP_002891316.1 CDS rplD NC_012691.1 123962 124567 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 123962..124567 Tolumonas auensis DSM 9187 7886088 YP_002891317.1 CDS rplW NC_012691.1 124564 124869 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 124564..124869 Tolumonas auensis DSM 9187 7886089 YP_002891318.1 CDS rplB NC_012691.1 124884 125705 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 124884..125705 Tolumonas auensis DSM 9187 7886090 YP_002891319.1 CDS Tola_0103 NC_012691.1 125727 126005 D TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: asu:Asuc_0463 30S ribosomal protein S19; 30S ribosomal protein S19 125727..126005 Tolumonas auensis DSM 9187 7886091 YP_002891320.1 CDS rplV NC_012691.1 126013 126360 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 126013..126360 Tolumonas auensis DSM 9187 7886092 YP_002891321.1 CDS Tola_0105 NC_012691.1 126364 127080 D KEGG: aha:AHA_0315 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 126364..127080 Tolumonas auensis DSM 9187 7886093 YP_002891322.1 CDS rplP NC_012691.1 127094 127507 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 127094..127507 Tolumonas auensis DSM 9187 7886094 YP_002891323.1 CDS Tola_0107 NC_012691.1 127507 127698 D TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: aha:AHA_0317 ribosomal protein L29; 50S ribosomal protein L29 127507..127698 Tolumonas auensis DSM 9187 7886095 YP_002891324.1 CDS Tola_0108 NC_012691.1 127698 127946 D PFAM: ribosomal protein S17; KEGG: aha:AHA_0318 ribosomal protein S17; 30S ribosomal protein S17 127698..127946 Tolumonas auensis DSM 9187 7886096 YP_002891325.1 CDS rplN NC_012691.1 128101 128469 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 128101..128469 Tolumonas auensis DSM 9187 7886097 YP_002891326.1 CDS rplX NC_012691.1 128482 128799 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 128482..128799 Tolumonas auensis DSM 9187 7886098 YP_002891327.1 CDS Tola_0111 NC_012691.1 128813 129352 D PFAM: ribosomal protein L5; KEGG: plu:plu4714 50S ribosomal protein L5; 50S ribosomal protein L5 128813..129352 Tolumonas auensis DSM 9187 7886099 YP_002891328.1 CDS Tola_0112 NC_012691.1 129364 129669 D PFAM: ribosomal protein S14; KEGG: aha:AHA_0322 30S ribosomal protein S14; 30S ribosomal protein S14 129364..129669 Tolumonas auensis DSM 9187 7886100 YP_002891329.1 CDS rpsH NC_012691.1 129692 130084 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 129692..130084 Tolumonas auensis DSM 9187 7886101 YP_002891330.1 CDS rplF NC_012691.1 130096 130629 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 130096..130629 Tolumonas auensis DSM 9187 7886102 YP_002891331.1 CDS Tola_0115 NC_012691.1 130639 130992 D TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: vha:VIBHAR_00746 50S ribosomal protein L18; 50S ribosomal protein L18 130639..130992 Tolumonas auensis DSM 9187 7886103 YP_002891332.1 CDS rpsE NC_012691.1 131007 131507 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 131007..131507 Tolumonas auensis DSM 9187 7886104 YP_002891333.1 CDS Tola_0117 NC_012691.1 131515 131697 D TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: asa:ASA_4069 ribosomal protein L30; 50S ribosomal protein L30 131515..131697 Tolumonas auensis DSM 9187 7886105 YP_002891334.1 CDS rplO NC_012691.1 131700 132134 D late assembly protein; 50S ribosomal protein L15 131700..132134 Tolumonas auensis DSM 9187 7886106 YP_002891335.1 CDS secY NC_012691.1 132142 133473 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 132142..133473 Tolumonas auensis DSM 9187 7886107 YP_002891336.1 CDS rpmJ NC_012691.1 133501 133614 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 133501..133614 Tolumonas auensis DSM 9187 7886108 YP_002891337.1 CDS rpsM NC_012691.1 133755 134111 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 133755..134111 Tolumonas auensis DSM 9187 7886109 YP_002891338.1 CDS Tola_0122 NC_012691.1 134127 134516 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 134127..134516 Tolumonas auensis DSM 9187 7886110 YP_002891339.1 CDS Tola_0123 NC_012691.1 134548 135168 D KEGG: asa:ASA_4063 ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 134548..135168 Tolumonas auensis DSM 9187 7886111 YP_002891340.1 CDS Tola_0124 NC_012691.1 135194 136183 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 135194..136183 Tolumonas auensis DSM 9187 7886112 YP_002891341.1 CDS Tola_0125 NC_012691.1 136227 136613 D TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: shw:Sputw3181_0182 50S ribosomal protein L17; 50S ribosomal protein L17 136227..136613 Tolumonas auensis DSM 9187 7886113 YP_002891342.1 CDS Tola_0126 NC_012691.1 136810 137397 D PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB1654 putative ribosomal protein N-acetyltransferase; N-acetyltransferase GCN5 136810..137397 Tolumonas auensis DSM 9187 7886114 YP_002891343.1 CDS Tola_0127 NC_012691.1 137412 137732 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(137412..137732) Tolumonas auensis DSM 9187 7886115 YP_002891344.1 CDS Tola_0128 NC_012691.1 137887 139047 D KEGG: aha:AHA_0589 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase 137887..139047 Tolumonas auensis DSM 9187 7886116 YP_002891345.1 CDS metL NC_012691.1 139100 141538 D multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 139100..141538 Tolumonas auensis DSM 9187 7886117 YP_002891346.1 CDS Tola_0130 NC_012691.1 141541 141822 R PFAM: acylphosphatase; KEGG: stm:STM1083 putative phosphohydrolase; acylphosphatase complement(141541..141822) Tolumonas auensis DSM 9187 7886118 YP_002891347.1 CDS Tola_0131 NC_012691.1 141994 142824 D KEGG: aha:AHA_0164 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; formamidopyrimidine-DNA glycosylase 141994..142824 Tolumonas auensis DSM 9187 7886119 YP_002891348.1 CDS Tola_0132 NC_012691.1 142815 143309 R KEGG: aha:AHA_0166 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase complement(142815..143309) Tolumonas auensis DSM 9187 7886120 YP_002891349.1 CDS Tola_0133 NC_012691.1 143453 143836 D KEGG: rfr:Rfer_2525 hypothetical protein; hypothetical protein 143453..143836 Tolumonas auensis DSM 9187 7886121 YP_002891350.1 CDS Tola_0134 NC_012691.1 143840 144766 D KEGG: azo:azo0531 hypothetical protein; hypothetical protein 143840..144766 Tolumonas auensis DSM 9187 7886122 YP_002891351.1 CDS Tola_0135 NC_012691.1 144835 145554 D catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 144835..145554 Tolumonas auensis DSM 9187 7886123 YP_002891352.1 CDS Tola_0136 NC_012691.1 145557 146864 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(145557..146864) Tolumonas auensis DSM 9187 7886124 YP_002891353.1 CDS Tola_0137 NC_012691.1 147246 148361 D PFAM: Extracellular ligand-binding receptor; KEGG: asa:ASA_4279 ABC-type branched-chain amino acid transporter, periplasmic binding protein; extracellular ligand-binding receptor 147246..148361 Tolumonas auensis DSM 9187 7886125 YP_002891354.1 CDS Tola_0138 NC_012691.1 148482 149402 D PFAM: inner-membrane translocator; KEGG: asa:ASA_4280 ABC-type branched-chain amino acid transporter, permease protein; inner-membrane translocator 148482..149402 Tolumonas auensis DSM 9187 7886126 YP_002891355.1 CDS livM NC_012691.1 149399 150646 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 149399..150646 Tolumonas auensis DSM 9187 7886127 YP_002891356.1 CDS livG NC_012691.1 150643 151407 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 150643..151407 Tolumonas auensis DSM 9187 7886128 YP_002891357.1 CDS Tola_0141 NC_012691.1 151418 152125 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_0109 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF; ABC transporter 151418..152125 Tolumonas auensis DSM 9187 7886129 YP_002891358.1 CDS Tola_0142 NC_012691.1 152195 152515 D KEGG: aha:AHA_0106 thiosulfate sulfurtransferase GlpE; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; thiosulfate sulfurtransferase 152195..152515 Tolumonas auensis DSM 9187 7886130 YP_002891359.1 CDS Tola_0143 NC_012691.1 152512 153342 D PFAM: Rhomboid family protein; KEGG: asa:ASA_4287 GlpG protein; rhomboid family protein 152512..153342 Tolumonas auensis DSM 9187 7886131 YP_002891360.1 CDS Tola_0144 NC_012691.1 153538 154059 D PFAM: Chorismate lyase; KEGG: amc:MADE_00071 hypothetical chorismate pyruvate lyase; chorismate lyase 153538..154059 Tolumonas auensis DSM 9187 7886132 YP_002891361.1 CDS Tola_0145 NC_012691.1 154062 154922 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: yen:YE3858 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 154062..154922 Tolumonas auensis DSM 9187 7886133 YP_002891362.1 CDS Tola_0146 NC_012691.1 155009 155629 D KEGG: aha:AHA_0183 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein; SOS-response transcriptional repressor, LexA 155009..155629 Tolumonas auensis DSM 9187 7886134 YP_002891363.1 CDS Tola_0147 NC_012691.1 155678 156142 R TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: aha:AHA_0188 RNA methyltransferase; TrmH family RNA methyltransferase complement(155678..156142) Tolumonas auensis DSM 9187 7886135 YP_002891364.1 CDS Tola_0148 NC_012691.1 156358 156813 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: asa:ASA_4148 rrf2 family transcriptional regulator; AsnC family transcriptional regulator 156358..156813 Tolumonas auensis DSM 9187 7886136 YP_002891365.1 CDS Tola_0149 NC_012691.1 156874 158316 R TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: aha:AHA_0254 TrkH; TrkH family potassium uptake protein complement(156874..158316) Tolumonas auensis DSM 9187 7886137 YP_002891366.1 CDS Tola_0150 NC_012691.1 158322 159698 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: aha:AHA_0255 potassium transporter peripheral membrane component; TrkA-N domain-containing protein complement(158322..159698) Tolumonas auensis DSM 9187 7886138 YP_002891367.1 CDS Tola_0151 NC_012691.1 159695 160996 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: asa:ASA_4142 ribosomal RNA small subunit methyltransferase B; sun protein complement(159695..160996) Tolumonas auensis DSM 9187 7886139 YP_002891368.1 CDS Tola_0152 NC_012691.1 161018 161962 R TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: vha:VIBHAR_00392 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(161018..161962) Tolumonas auensis DSM 9187 7886140 YP_002891369.1 CDS def NC_012691.1 161980 162483 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(161980..162483) Tolumonas auensis DSM 9187 7886141 YP_002891370.1 CDS Tola_0154 NC_012691.1 162578 163678 D PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: asa:ASA_4139 LysM domain-containing protein; Peptidoglycan-binding LysM 162578..163678 Tolumonas auensis DSM 9187 7886142 YP_002891371.1 CDS Tola_0155 NC_012691.1 163659 164783 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: aha:AHA_0260 DNA protecting protein DprA; DNA protecting protein DprA 163659..164783 Tolumonas auensis DSM 9187 7886143 YP_002891372.1 CDS Tola_0156 NC_012691.1 164786 165259 D PFAM: protein of unknown function DUF494; KEGG: aha:AHA_0261 hypothetical protein; hypothetical protein 164786..165259 Tolumonas auensis DSM 9187 7886144 YP_002891373.1 CDS Tola_0157 NC_012691.1 165282 165854 D PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: swd:Swoo_0043 DNA topoisomerase type IA Zn finger domain-containing protein; DNA topoisomerase type IA zn finger domain-containing protein 165282..165854 Tolumonas auensis DSM 9187 7886145 YP_002891374.1 CDS Tola_0158 NC_012691.1 165901 166404 D KEGG: asa:ASA_4135 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 165901..166404 Tolumonas auensis DSM 9187 7886146 YP_002891375.1 CDS Tola_0159 NC_012691.1 166442 167002 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: aha:AHA_0264 SUA5/YciO/YrdC family protein; Sua5/YciO/YrdC/YwlC family protein 166442..167002 Tolumonas auensis DSM 9187 7886147 YP_002891376.1 CDS aroE NC_012691.1 167047 167868 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 167047..167868 Tolumonas auensis DSM 9187 7886148 YP_002891377.1 CDS Tola_0161 NC_012691.1 167872 168414 R KEGG: vvy:VV3213 carbonic anhydrase; carbonic anhydrase complement(167872..168414) Tolumonas auensis DSM 9187 7886149 YP_002891378.1 CDS Tola_0162 NC_012691.1 174255 176429 R PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: aha:AHA_0211 generic methyltransferase; hypothetical protein complement(174255..176429) Tolumonas auensis DSM 9187 7886157 YP_002891379.1 CDS Tola_0163 NC_012691.1 176513 176920 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pcd1; cytidine deaminase Pcd1; K01489 cytidine deaminase; cytidine deaminase complement(176513..176920) Tolumonas auensis DSM 9187 7886158 YP_002891380.1 CDS Tola_0164 NC_012691.1 177017 178681 R KEGG: asa:ASA_0485 trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase complement(177017..178681) Tolumonas auensis DSM 9187 7886159 YP_002891381.1 CDS Tola_0165 NC_012691.1 178750 180186 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC complement(178750..180186) Tolumonas auensis DSM 9187 7886160 YP_002891382.1 CDS treR NC_012691.1 180388 181335 R regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor complement(180388..181335) Tolumonas auensis DSM 9187 7886161 YP_002891383.1 CDS Tola_0167 NC_012691.1 181552 182058 D PFAM: conserved hypothetical protein; KEGG: asa:ASA_3550 hypothetical protein; hypothetical protein 181552..182058 Tolumonas auensis DSM 9187 7885676 YP_002891384.1 CDS Tola_0168 NC_012691.1 182074 182736 D PFAM: Glutathione S-transferase domain; KEGG: hch:HCH_06697 glutathione S-transferase; glutathione S-transferase 182074..182736 Tolumonas auensis DSM 9187 7885677 YP_002891385.1 CDS Tola_0169 NC_012691.1 182806 184074 R KEGG: aha:AHA_0506 O-acetylhomoserine sulfhydrylase MetY; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(182806..184074) Tolumonas auensis DSM 9187 7885678 YP_002891386.1 CDS Tola_0170 NC_012691.1 184256 185704 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: asa:ASA_0435 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter complement(184256..185704) Tolumonas auensis DSM 9187 7885679 YP_002891387.1 CDS Tola_0171 NC_012691.1 185732 186520 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppf:Pput_0690 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(185732..186520) Tolumonas auensis DSM 9187 7885680 YP_002891388.1 CDS Tola_0172 NC_012691.1 186652 187485 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl01_2802 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(186652..187485) Tolumonas auensis DSM 9187 7885681 YP_002891389.1 CDS nhaB NC_012691.1 187696 189267 D involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 187696..189267 Tolumonas auensis DSM 9187 7885682 YP_002891390.1 CDS Tola_0174 NC_012691.1 189337 190230 D PFAM: homocysteine S-methyltransferase; KEGG: pfo:Pfl01_2779 homocysteine S-methyltransferase; homocysteine S-methyltransferase 189337..190230 Tolumonas auensis DSM 9187 7885683 YP_002891391.1 CDS Tola_0175 NC_012691.1 190279 190560 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA4216 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase complement(190279..190560) Tolumonas auensis DSM 9187 7885684 YP_002891392.1 CDS Tola_0176 NC_012691.1 190664 192367 R KEGG: vsp:VS_3040 predicted membrane protein; hypothetical protein complement(190664..192367) Tolumonas auensis DSM 9187 7885685 YP_002891393.1 CDS Tola_0177 NC_012691.1 192434 193234 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_0035 Cof family hydrolase; cof family hydrolase complement(192434..193234) Tolumonas auensis DSM 9187 7885686 YP_002891394.1 CDS Tola_0178 NC_012691.1 193450 195597 R KEGG: aha:AHA_0039 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(193450..195597) Tolumonas auensis DSM 9187 7885687 YP_002891395.1 CDS rpoZ NC_012691.1 195728 196012 R promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(195728..196012) Tolumonas auensis DSM 9187 7885688 YP_002891396.1 CDS Tola_0180 NC_012691.1 196061 196690 R KEGG: aha:AHA_0041 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase complement(196061..196690) Tolumonas auensis DSM 9187 7885689 YP_002891397.1 CDS rpmG NC_012691.1 196801 196968 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(196801..196968) Tolumonas auensis DSM 9187 7885690 YP_002891398.1 CDS rpmB NC_012691.1 196980 197216 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(196980..197216) Tolumonas auensis DSM 9187 7885691 YP_002891399.1 CDS radC NC_012691.1 197357 198031 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(197357..198031) Tolumonas auensis DSM 9187 7885692 YP_002891400.1 CDS Tola_0184 NC_012691.1 198137 199366 D KEGG: asa:ASA_4230 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 198137..199366 Tolumonas auensis DSM 9187 7885693 YP_002891401.1 CDS dut NC_012691.1 199353 199808 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 199353..199808 Tolumonas auensis DSM 9187 7885694 YP_002891402.1 CDS pyrE NC_012691.1 199883 200524 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(199883..200524) Tolumonas auensis DSM 9187 7885695 YP_002891403.1 CDS Tola_0187 NC_012691.1 200558 201271 R KEGG: swd:Swoo_4568 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH complement(200558..201271) Tolumonas auensis DSM 9187 7885696 YP_002891404.1 CDS Tola_0188 NC_012691.1 201398 202258 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: aha:AHA_4225 hypothetical protein; hypothetical protein 201398..202258 Tolumonas auensis DSM 9187 7885697 YP_002891405.1 CDS Tola_0189 NC_012691.1 202310 203602 R PFAM: sodium:dicarboxylate symporter; KEGG: asa:ASA_1706 sodium:dicarboxylate symporter family protein; sodium:dicarboxylate symporter complement(202310..203602) Tolumonas auensis DSM 9187 7885698 YP_002891406.1 CDS Tola_0190 NC_012691.1 203927 205036 R KEGG: aav:Aave_3646 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(203927..205036) Tolumonas auensis DSM 9187 7885699 YP_002891407.1 CDS Tola_0191 NC_012691.1 210792 211256 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: asa:ASA_3807 YbaK/EbsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(210792..211256) Tolumonas auensis DSM 9187 7885704 YP_002891408.1 CDS Tola_0192 NC_012691.1 211572 211853 R PFAM: protein of unknown function DUF1255; KEGG: pmy:Pmen_2513 hypothetical protein; hypothetical protein complement(211572..211853) Tolumonas auensis DSM 9187 7885705 YP_002891409.1 CDS Tola_0193 NC_012691.1 212136 213677 D TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: pau:PA14_43050 hypothetical protein; type VI secretion-associated protein 212136..213677 Tolumonas auensis DSM 9187 7885706 YP_002891410.1 CDS Tola_0194 NC_012691.1 213691 214185 D TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: pmy:Pmen_0090 hypothetical protein; type VI secretion protein 213691..214185 Tolumonas auensis DSM 9187 7885707 YP_002891411.1 CDS Tola_0195 NC_012691.1 214204 215679 D TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: pmy:Pmen_0091 hypothetical protein; type VI secretion protein EvpB 214204..215679 Tolumonas auensis DSM 9187 7885708 YP_002891412.1 CDS Tola_0196 NC_012691.1 215682 216095 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: pen:PSEEN0525 hypothetical protein; type VI secretion system lysozyme-like protein 215682..216095 Tolumonas auensis DSM 9187 7885709 YP_002891413.1 CDS Tola_0197 NC_012691.1 216085 217842 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: pmy:Pmen_0095 hypothetical protein; type VI secretion protein 216085..217842 Tolumonas auensis DSM 9187 7885710 YP_002891414.1 CDS Tola_0198 NC_012691.1 217806 218825 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: pag:PLES_36661 hypothetical protein; type VI secretion protein 217806..218825 Tolumonas auensis DSM 9187 7885711 YP_002891415.1 CDS Tola_0199 NC_012691.1 218812 221421 D KEGG: pau:PA14_42980 putative ClpA/B-type protease; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 218812..221421 Tolumonas auensis DSM 9187 7885712 YP_002891416.1 CDS Tola_0200 NC_012691.1 221430 222434 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pmy:Pmen_0098 fis family transcriptional regulator; Fis family sigma-54 specific transcriptional regulator 221430..222434 Tolumonas auensis DSM 9187 7885713 YP_002891417.1 CDS Tola_0201 NC_012691.1 222434 222571 D hypothetical protein 222434..222571 Tolumonas auensis DSM 9187 7885714 YP_002891418.1 CDS Tola_0202 NC_012691.1 222575 223870 D TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: pst:PSPTO_5422 FHA domain-containing protein; FHA domain-containing protein 222575..223870 Tolumonas auensis DSM 9187 7885715 YP_002891419.1 CDS Tola_0203 NC_012691.1 223876 224427 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: vsa:VSAL_I1116 putative type VI secretion protein VasD; type VI secretion lipoprotein 223876..224427 Tolumonas auensis DSM 9187 7885716 YP_002891420.1 CDS Tola_0204 NC_012691.1 224501 225844 D TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: pag:PLES_36601 hypothetical protein; type VI secretion protein 224501..225844 Tolumonas auensis DSM 9187 7885717 YP_002891421.1 CDS Tola_0205 NC_012691.1 225846 226712 D TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: pau:PA14_42910 hypothetical protein; DotU family type IV / VI secretion system protein 225846..226712 Tolumonas auensis DSM 9187 7885718 YP_002891422.1 CDS Tola_0206 NC_012691.1 226709 230230 D TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: vfm:VFMJ11_1075 type VI secretion protein IcmF; type VI secretion protein IcmF 226709..230230 Tolumonas auensis DSM 9187 7885719 YP_002891423.1 CDS Tola_0207 NC_012691.1 230238 230972 D KEGG: pfo:Pfl01_5576 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 230238..230972 Tolumonas auensis DSM 9187 7885720 YP_002891424.1 CDS Tola_0208 NC_012691.1 231013 231915 D PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: vfm:VFMJ11_1073 serine/threonine protein kinase; serine/threonine protein kinase 231013..231915 Tolumonas auensis DSM 9187 7885721 YP_002891425.1 CDS Tola_0209 NC_012691.1 231934 234045 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pmy:Pmen_0820 rhs element Vgr protein; ImpA family type VI secretion-associated protein 231934..234045 Tolumonas auensis DSM 9187 7885722 YP_002891426.1 CDS Tola_0210 NC_012691.1 234171 235781 D KEGG: asa:ASA_0717 glutamate-cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 234171..235781 Tolumonas auensis DSM 9187 7885723 YP_002891427.1 CDS Tola_0211 NC_012691.1 235816 236493 R PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_2356 glutathione S-transferase domain-containing protein; glutathione S-transferase complement(235816..236493) Tolumonas auensis DSM 9187 7885724 YP_002891428.1 CDS Tola_0212 NC_012691.1 236831 238168 D PFAM: Citrate carrier protein; KEGG: bcb:BCB4264_A0616 citrate cation symporter family; citrate carrier protein 236831..238168 Tolumonas auensis DSM 9187 7885725 YP_002891429.1 CDS Tola_0213 NC_012691.1 238233 239666 D PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme; Malate dehydrogenase (oxaloacetate-decarboxylating) 238233..239666 Tolumonas auensis DSM 9187 7885726 YP_002891430.1 CDS Tola_0214 NC_012691.1 239797 241407 D PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: spe:Spro_1959 sensory histidine kinase DcuS; signal transduction histidine kinase regulating citrate/malate metabolism 239797..241407 Tolumonas auensis DSM 9187 7885727 YP_002891431.1 CDS Tola_0215 NC_012691.1 241404 242126 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA4398 DNA-binding transcriptional activator DcuR; response regulator receiver 241404..242126 Tolumonas auensis DSM 9187 7885728 YP_002891432.1 CDS Tola_0216 NC_012691.1 242313 244607 D KEGG: sdn:Sden_0572 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 242313..244607 Tolumonas auensis DSM 9187 7885729 YP_002891433.1 CDS Tola_0217 NC_012691.1 244649 245449 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: kpe:KPK_1619 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(244649..245449) Tolumonas auensis DSM 9187 7885730 YP_002891434.1 CDS Tola_0218 NC_012691.1 245446 246081 R KEGG: sfu:Sfum_3508 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(245446..246081) Tolumonas auensis DSM 9187 7885731 YP_002891435.1 CDS Tola_0219 NC_012691.1 246078 246881 R KEGG: eca:ECA3197 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase complement(246078..246881) Tolumonas auensis DSM 9187 7885732 YP_002891436.1 CDS Tola_0220 NC_012691.1 247076 247534 R KEGG: aha:AHA_2860 hypothetical protein; hypothetical protein complement(247076..247534) Tolumonas auensis DSM 9187 7885733 YP_002891437.1 CDS Tola_0221 NC_012691.1 247605 248774 D PFAM: ROK family protein; KEGG: mes:Meso_3115 ROK domain containing protein; ROK family protein 247605..248774 Tolumonas auensis DSM 9187 7885734 YP_002891438.1 CDS Tola_0222 NC_012691.1 248832 250367 R PFAM: protein of unknown function DUF1593; KEGG: sde:Sde_0565 signal peptide and transmembrane prediction; hypothetical protein complement(248832..250367) Tolumonas auensis DSM 9187 7885735 YP_002891439.1 CDS Tola_0223 NC_012691.1 251260 252396 D NAD-binding; L-idonate 5-dehydrogenase 251260..252396 Tolumonas auensis DSM 9187 7885736 YP_002891440.1 CDS Tola_0224 NC_012691.1 252398 253162 D Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 252398..253162 Tolumonas auensis DSM 9187 7885737 YP_002891441.1 CDS Tola_0225 NC_012691.1 253210 254529 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: stm:STM4482 L-idonate transport protein; gluconate transporter 253210..254529 Tolumonas auensis DSM 9187 7885738 YP_002891442.1 CDS Tola_0226 NC_012691.1 254580 255578 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: see:SNSL254_A4829 HTH-type transcriptional regulator IdnR; transcriptional regulator, LacI family 254580..255578 Tolumonas auensis DSM 9187 7885739 YP_002891443.1 CDS Tola_0227 NC_012691.1 255595 256122 D KEGG: msu:MS0957 GntK protein; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 255595..256122 Tolumonas auensis DSM 9187 7885740 YP_002891444.1 CDS Tola_0228 NC_012691.1 256141 257943 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 256141..257943 Tolumonas auensis DSM 9187 7885741 YP_002891445.1 CDS Tola_0229 NC_012691.1 257959 258606 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pin:Ping_2930 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 257959..258606 Tolumonas auensis DSM 9187 7885742 YP_002891446.1 CDS Tola_0230 NC_012691.1 258798 259370 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: slo:Shew_0535 single-strand binding protein; single-strand binding protein complement(258798..259370) Tolumonas auensis DSM 9187 7885743 YP_002891447.1 CDS Tola_0231 NC_012691.1 259566 262400 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aha:AHA_3955 excinuclease ABC, A subunit; excinuclease ABC subunit A 259566..262400 Tolumonas auensis DSM 9187 7885744 YP_002891448.1 CDS ddl NC_012691.1 262466 263458 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(262466..263458) Tolumonas auensis DSM 9187 7885745 YP_002891449.1 CDS Tola_0233 NC_012691.1 263592 264263 D KEGG: son:SO_A0180 hypothetical protein; hypothetical protein 263592..264263 Tolumonas auensis DSM 9187 7885746 YP_002891450.1 CDS Tola_0234 NC_012691.1 264240 265127 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB1892 hypothetical protein; hypothetical protein complement(264240..265127) Tolumonas auensis DSM 9187 7885747 YP_002891451.1 CDS Tola_0235 NC_012691.1 265131 265850 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_0477 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; HAD-superfamily hydrolase complement(265131..265850) Tolumonas auensis DSM 9187 7885748 YP_002891452.1 CDS Tola_0236 NC_012691.1 265917 266864 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1246 putative transcriptional regulator, LysR family; LysR family transcriptional regulator complement(265917..266864) Tolumonas auensis DSM 9187 7885749 YP_002891453.1 CDS Tola_0237 NC_012691.1 267112 268413 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: ppr:PBPRA3006 multidrug resistance protein; Bcr/CflA subfamily drug resistance transporter 267112..268413 Tolumonas auensis DSM 9187 7885750 YP_002891454.1 CDS Tola_0238 NC_012691.1 268540 268980 D TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: aha:AHA_0281 D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 268540..268980 Tolumonas auensis DSM 9187 7885751 YP_002891455.1 CDS Tola_0239 NC_012691.1 268934 269641 R PFAM: Methyltransferase type 12; Spermine synthase; KEGG: aha:AHA_0280 hypothetical protein; type 12 methyltransferase complement(268934..269641) Tolumonas auensis DSM 9187 7885752 YP_002891456.1 CDS Tola_0240 NC_012691.1 269638 271677 R PFAM: AsmA family protein; KEGG: asa:ASA_4114 hypothetical protein; AsmA family protein complement(269638..271677) Tolumonas auensis DSM 9187 7885753 YP_002891457.1 CDS Tola_0241 NC_012691.1 271727 273796 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(271727..273796) Tolumonas auensis DSM 9187 7885754 YP_002891458.1 CDS Tola_0242 NC_012691.1 274302 274856 D TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol-specific IIBC component; PTS system glucitol/sorbitol-specific transporter subunit IIC 274302..274856 Tolumonas auensis DSM 9187 7885755 YP_002891459.1 CDS Tola_0243 NC_012691.1 274878 275861 D KEGG: asa:ASA_3582 PTS system, glucitol/sorbitol-specific IIBC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC 274878..275861 Tolumonas auensis DSM 9187 7885756 YP_002891460.1 CDS Tola_0244 NC_012691.1 275880 276245 D PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: asa:ASA_3581 PTS system, glucitol/sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA 275880..276245 Tolumonas auensis DSM 9187 7884621 YP_002891461.1 CDS Tola_0245 NC_012691.1 276328 277104 D catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase 276328..277104 Tolumonas auensis DSM 9187 7884622 YP_002891462.1 CDS Tola_0246 NC_012691.1 277210 277566 D PFAM: Glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator; glucitol operon activator 277210..277566 Tolumonas auensis DSM 9187 7884623 YP_002891463.1 CDS srlR NC_012691.1 277646 278410 D regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR 277646..278410 Tolumonas auensis DSM 9187 7884624 YP_002891464.1 CDS Tola_0248 NC_012691.1 278407 278862 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sbm:Shew185_3498 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(278407..278862) Tolumonas auensis DSM 9187 7884625 YP_002891465.1 CDS Tola_0249 NC_012691.1 278999 279796 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: asa:ASA_3380 ABC-type methionine transporter, periplasmic binding protein; lipoprotein complement(278999..279796) Tolumonas auensis DSM 9187 7884626 YP_002891466.1 CDS Tola_0250 NC_012691.1 279856 280509 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_0914 D-methionine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(279856..280509) Tolumonas auensis DSM 9187 7884627 YP_002891467.1 CDS metN NC_012691.1 280490 281533 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(280490..281533) Tolumonas auensis DSM 9187 7884628 YP_002891468.1 CDS Tola_0252 NC_012691.1 281756 282796 R KEGG: pat:Patl_2280 hypothetical protein; hypothetical protein complement(281756..282796) Tolumonas auensis DSM 9187 7884629 YP_002891469.1 CDS Tola_0253 NC_012691.1 283089 284132 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 283089..284132 Tolumonas auensis DSM 9187 7884630 YP_002891470.1 CDS Tola_0254 NC_012691.1 284181 285134 D TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: aha:AHA_0401 rod shape-determining protein MreC; rod shape-determining protein MreC 284181..285134 Tolumonas auensis DSM 9187 7884631 YP_002891471.1 CDS Tola_0255 NC_012691.1 285131 285622 D TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: asa:ASA_3935 rod shape-determining protein MreD; rod shape-determining protein MreD 285131..285622 Tolumonas auensis DSM 9187 7884632 YP_002891472.1 CDS Tola_0256 NC_012691.1 285628 286206 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: aha:AHA_0403 septum formation protein Maf; maf protein 285628..286206 Tolumonas auensis DSM 9187 7884633 YP_002891473.1 CDS Tola_0257 NC_012691.1 286230 287699 D involved in the processing of the 5'end of 16S rRNA; ribonuclease G 286230..287699 Tolumonas auensis DSM 9187 7884634 YP_002891474.1 CDS Tola_0258 NC_012691.1 287754 291518 D KEGG: aha:AHA_0405 hypothetical protein; hypothetical protein 287754..291518 Tolumonas auensis DSM 9187 7884635 YP_002891475.1 CDS Tola_0259 NC_012691.1 291518 292339 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: asa:ASA_3930 beta-ureidopropionase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 291518..292339 Tolumonas auensis DSM 9187 7884636 YP_002891476.1 CDS Tola_0260 NC_012691.1 292344 293789 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: asa:ASA_3929 TldD protein, suppresses the inhibitory activity of the carbon storage regulator (CsrA); peptidase U62 modulator of DNA gyrase 292344..293789 Tolumonas auensis DSM 9187 7884637 YP_002891477.1 CDS Tola_0261 NC_012691.1 293843 294367 R PFAM: protein of unknown function DUF615; KEGG: aha:AHA_3937 hypothetical protein; hypothetical protein complement(293843..294367) Tolumonas auensis DSM 9187 7884638 YP_002891478.1 CDS Tola_0262 NC_012691.1 294453 295796 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: aha:AHA_3936 protein PmbA; peptidase U62 modulator of DNA gyrase 294453..295796 Tolumonas auensis DSM 9187 7884639 YP_002891479.1 CDS Tola_0263 NC_012691.1 295840 296169 R PFAM: protein of unknown function DUF496; KEGG: ppr:PBPRA1961 hypothetical protein; hypothetical protein complement(295840..296169) Tolumonas auensis DSM 9187 7884640 YP_002891480.1 CDS Tola_0264 NC_012691.1 296278 296580 R hypothetical protein complement(296278..296580) Tolumonas auensis DSM 9187 7884641 YP_002891481.1 CDS Tola_0265 NC_012691.1 296585 298615 R TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: asa:ASA_0087 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep complement(296585..298615) Tolumonas auensis DSM 9187 7884642 YP_002891482.1 CDS Tola_0266 NC_012691.1 298691 299158 D KEGG: hypothetical protein; hypothetical protein 298691..299158 Tolumonas auensis DSM 9187 7884643 YP_002891483.1 CDS Tola_0267 NC_012691.1 299201 300319 D KEGG: pna:Pnap_3259 TRAP-type uncharacterized transport system protein, periplasmic component; TRAP-type transport system periplasmic component 299201..300319 Tolumonas auensis DSM 9187 7884644 YP_002891484.1 CDS Tola_0268 NC_012691.1 300429 301655 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: asa:ASA_0086 cysteine desulphurase; SufS subfamily cysteine desulfurase 300429..301655 Tolumonas auensis DSM 9187 7884645 YP_002891485.1 CDS Tola_0269 NC_012691.1 301648 302106 D PFAM: Fe-S metabolism associated SufE; KEGG: aha:AHA_4240 SufE protein; Fe-S metabolism associated SufE 301648..302106 Tolumonas auensis DSM 9187 7884646 YP_002891486.1 CDS Tola_0270 NC_012691.1 302184 302861 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: vha:VIBHAR_04978 diguanylate cyclase/phosphodiesterase; diguanylate phosphodiesterase 302184..302861 Tolumonas auensis DSM 9187 7884647 YP_002891487.1 CDS Tola_0271 NC_012691.1 302926 303705 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: aha:AHA_4241 ThiF domain-containing protein; UBA/THIF-type NAD/FAD binding protein complement(302926..303705) Tolumonas auensis DSM 9187 7884648 YP_002891488.1 CDS Tola_0272 NC_012691.1 303910 304686 D PFAM: glycosyl transferase family 2; KEGG: pst:PSPTO_5587 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 303910..304686 Tolumonas auensis DSM 9187 7884649 YP_002891489.1 CDS Tola_0273 NC_012691.1 304676 305017 D PFAM: lipid A biosynthesis domain protein; KEGG: smt:Smal_3961 lipid A biosynthesis domain protein; lipid A biosynthesis domain-containing protein 304676..305017 Tolumonas auensis DSM 9187 7884650 YP_002891490.1 CDS Tola_0274 NC_012691.1 305045 306760 D PFAM: glycosyl transferase family 39; KEGG: pat:Patl_3674 glycosyl transferase family protein; glycosyl transferase family protein 305045..306760 Tolumonas auensis DSM 9187 7884651 YP_002891491.1 CDS Tola_0275 NC_012691.1 306763 307770 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: esa:ESA_01535 hypothetical protein; NAD-dependent epimerase/dehydratase 306763..307770 Tolumonas auensis DSM 9187 7884652 YP_002891492.1 CDS Tola_0276 NC_012691.1 307758 308351 R PFAM: protein of unknown function DUF330; KEGG: eca:ECA2531 putative lipoprotein; hypothetical protein complement(307758..308351) Tolumonas auensis DSM 9187 7884653 YP_002891493.1 CDS Tola_0277 NC_012691.1 308348 309985 R PFAM: Mammalian cell entry related domain protein; KEGG: ypb:YPTS_1549 hypothetical protein; mammalian cell entry domain-containing protein complement(308348..309985) Tolumonas auensis DSM 9187 7884654 YP_002891494.1 CDS Tola_0278 NC_012691.1 309975 311276 R TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: eca:ECA2533 paraquat-inducible protein A; PqiA family integral membrane protein complement(309975..311276) Tolumonas auensis DSM 9187 7884655 YP_002891495.1 CDS Tola_0279 NC_012691.1 311434 312918 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(311434..312918) Tolumonas auensis DSM 9187 7884656 YP_002891496.1 CDS Tola_0280 NC_012691.1 313071 313949 D participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 313071..313949 Tolumonas auensis DSM 9187 7884657 YP_002891497.1 CDS pgi NC_012691.1 314089 315738 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 314089..315738 Tolumonas auensis DSM 9187 7884658 YP_002891498.1 CDS Tola_0282 NC_012691.1 315807 317480 R KEGG: aha:AHA_2666 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; NMT1/THI5 like domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(315807..317480) Tolumonas auensis DSM 9187 7884659 YP_002891499.1 CDS Tola_0283 NC_012691.1 317922 319841 D TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: aha:AHA_0551 PTS system mannitol-specific EIICBA component (EIICBA-mtl) (EII-mtl); PTS system mannitol-specific transporter subunit IIC 317922..319841 Tolumonas auensis DSM 9187 7884660 YP_002891500.1 CDS Tola_0284 NC_012691.1 319899 321047 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: asa:ASA_3756 mannitol-1-phosphate 5-dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 319899..321047 Tolumonas auensis DSM 9187 7884661 YP_002891501.1 CDS mtlR NC_012691.1 321182 321718 D Acts as a repressor of the mtlAD operon; mannitol repressor protein 321182..321718 Tolumonas auensis DSM 9187 7884662 YP_002891502.1 CDS Tola_0286 NC_012691.1 321992 323737 R TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: vha:VIBHAR_05960 PTS system fructose-specific IIBC component; PTS system fructose subfamily transporter subunit IIC complement(321992..323737) Tolumonas auensis DSM 9187 7884663 YP_002891503.1 CDS Tola_0287 NC_012691.1 323749 324687 R TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: vch:VCA0517 1-phosphofructokinase; 1-phosphofructokinase complement(323749..324687) Tolumonas auensis DSM 9187 7884664 YP_002891504.1 CDS Tola_0288 NC_012691.1 324680 325813 R phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein complement(324680..325813) Tolumonas auensis DSM 9187 7884665 YP_002891505.1 CDS Tola_0289 NC_012691.1 326070 327065 D binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 326070..327065 Tolumonas auensis DSM 9187 7884666 YP_002891506.1 CDS Tola_0290 NC_012691.1 327138 327605 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: pin:Ping_3554 sugar-phosphate isomerases, RpiB/LacA/LacB family protein; RpiB/LacA/LacB family sugar-phosphate isomerase 327138..327605 Tolumonas auensis DSM 9187 7884667 YP_002891507.1 CDS Tola_0291 NC_012691.1 327751 329121 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aha:AHA_1500 Na+ driven multidrug efflux pump; MATE efflux family protein 327751..329121 Tolumonas auensis DSM 9187 7884668 YP_002891508.1 CDS Tola_0292 NC_012691.1 329146 330540 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: hch:HCH_01213 outer membrane protein; NodT family RND efflux system outer membrane lipoprotein complement(329146..330540) Tolumonas auensis DSM 9187 7884669 YP_002891509.1 CDS Tola_0293 NC_012691.1 330533 332512 R PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: glo:Glov_0394 ABC transporter related; ABC transporter complement(330533..332512) Tolumonas auensis DSM 9187 7884670 YP_002891510.1 CDS Tola_0294 NC_012691.1 332509 333711 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: yen:YE1200 HlyD family secretion protein; RND family efflux transporter MFP subunit complement(332509..333711) Tolumonas auensis DSM 9187 7884671 YP_002891511.1 CDS Tola_0295 NC_012691.1 333808 334719 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_2858 drug/metabolite exporter family transporter; hypothetical protein complement(333808..334719) Tolumonas auensis DSM 9187 7884672 YP_002891512.1 CDS Tola_0296 NC_012691.1 334815 335900 R KEGG: dar:Daro_2784 molybdate ABC transporter ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(334815..335900) Tolumonas auensis DSM 9187 7884673 YP_002891513.1 CDS Tola_0297 NC_012691.1 335893 336570 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter permease complement(335893..336570) Tolumonas auensis DSM 9187 7884674 YP_002891514.1 CDS Tola_0298 NC_012691.1 336584 337435 R PFAM: TOBE domain protein; regulatory protein LysR; KEGG: dar:Daro_1477 molybdenum-binding protein, N-terminal:molybdenum-pterin binding protein; ModE family transcriptional regulator complement(336584..337435) Tolumonas auensis DSM 9187 7884675 YP_002891515.1 CDS Tola_0299 NC_012691.1 337613 338377 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR; KEGG: asa:ASA_3763 transcriptional activator AsaR; transcriptional regulator, LuxR family complement(337613..338377) Tolumonas auensis DSM 9187 7884676 YP_002891516.1 CDS Tola_0300 NC_012691.1 338618 339982 D KEGG: aha:AHA_4260 UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 338618..339982 Tolumonas auensis DSM 9187 7884677 YP_002891517.1 CDS Tola_0301 NC_012691.1 340118 340891 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aha:AHA_4255 glucitol operon repressor; Cro/CI family transcriptional regulator 340118..340891 Tolumonas auensis DSM 9187 7884678 YP_002891518.1 CDS Tola_0302 NC_012691.1 340996 342831 D TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: asa:ASA_4342 glucosamine-fructose-6-phosphateaminotransferase; glucosamine/fructose-6-phosphate aminotransferase 340996..342831 Tolumonas auensis DSM 9187 7884679 YP_002891519.1 CDS Tola_0303 NC_012691.1 342991 343821 D PFAM: TnsA endonuclease; KEGG: asa:ASA_4341 transposon Tn7 transposition protein TnsA; TnsA endonuclease 342991..343821 Tolumonas auensis DSM 9187 7884680 YP_002891520.1 CDS Tola_0304 NC_012691.1 343805 345892 D PFAM: Integrase catalytic region; KEGG: spc:Sputcn32_3935 putative transposase; integrase catalytic subunit 343805..345892 Tolumonas auensis DSM 9187 7884681 YP_002891521.1 CDS Tola_0305 NC_012691.1 345895 347556 D SMART: AAA ATPase; KEGG: ssn:SSON_3893 ATP-binding protein; ATPase AAA 345895..347556 Tolumonas auensis DSM 9187 7884682 YP_002891522.1 CDS Tola_0306 NC_012691.1 347561 349078 D KEGG: spc:Sputcn32_3931 transposition protein; transposition protein 347561..349078 Tolumonas auensis DSM 9187 7884683 YP_002891523.1 CDS Tola_0307 NC_012691.1 349090 350706 D KEGG: spc:Sputcn32_3930 transposition regulatory protein; transposition regulatory protein 349090..350706 Tolumonas auensis DSM 9187 7884684 YP_002891524.1 CDS Tola_0308 NC_012691.1 350834 351115 D PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; hypothetical protein 350834..351115 Tolumonas auensis DSM 9187 7884685 YP_002891525.1 CDS Tola_0309 NC_012691.1 351241 351366 R TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: vsa:VSAL_I0889 50S ribosomal protein L36; 50S ribosomal protein L36 complement(351241..351366) Tolumonas auensis DSM 9187 7884686 YP_002891526.1 CDS Tola_0310 NC_012691.1 351558 351929 D KEGG: mca:MCA0357 hypothetical protein; hypothetical protein 351558..351929 Tolumonas auensis DSM 9187 7884687 YP_002891527.1 CDS Tola_0311 NC_012691.1 352107 352631 D PFAM: Disulphide bond formation protein DsbB; KEGG: asa:ASA_2303 disulfide bond formation protein; Disulfide bond formation protein DsbB 352107..352631 Tolumonas auensis DSM 9187 7884688 YP_002891528.1 CDS Tola_0312 NC_012691.1 352730 353152 D PFAM: ferric-uptake regulator; KEGG: amc:MADE_01084 ferric uptake regulator; ferric uptake regulator, Fur family 352730..353152 Tolumonas auensis DSM 9187 7884689 YP_002891529.1 CDS Tola_0313 NC_012691.1 353447 353992 D KEGG: sfr:Sfri_1975 hypothetical protein; hypothetical protein 353447..353992 Tolumonas auensis DSM 9187 7884690 YP_002891530.1 CDS Tola_0314 NC_012691.1 353989 354156 D hypothetical protein 353989..354156 Tolumonas auensis DSM 9187 7884691 YP_002891531.1 CDS Tola_0315 NC_012691.1 354257 354904 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: swi:Swit_3743 1-Cys peroxiredoxin; peroxiredoxin 354257..354904 Tolumonas auensis DSM 9187 7884692 YP_002891532.1 CDS Tola_0316 NC_012691.1 354959 355936 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: ppr:PBPRB1236 hypothetical protein; C4-dicarboxylate transporter/malic acid transport protein 354959..355936 Tolumonas auensis DSM 9187 7884693 YP_002891533.1 CDS Tola_0317 NC_012691.1 355988 357697 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: sfr:Sfri_0585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 355988..357697 Tolumonas auensis DSM 9187 7884694 YP_002891534.1 CDS Tola_0318 NC_012691.1 357727 358071 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mmw:Mmwyl1_1812 alkylhydroperoxidase; alkylhydroperoxidase 357727..358071 Tolumonas auensis DSM 9187 7884695 YP_002891535.1 CDS Tola_0319 NC_012691.1 358125 358550 D PFAM: thioesterase superfamily protein; KEGG: sbn:Sbal195_1431 thioesterase superfamily protein; thioesterase superfamily protein 358125..358550 Tolumonas auensis DSM 9187 7884696 YP_002891536.1 CDS Tola_0320 NC_012691.1 358552 359394 D PFAM: beta-lactamase domain protein; KEGG: pca:Pcar_1589 beta-lactamase superfamily hydrolase; beta-lactamase domain-containing protein 358552..359394 Tolumonas auensis DSM 9187 7884697 YP_002891537.1 CDS Tola_0321 NC_012691.1 359424 359762 D SMART: Rhodanese domain protein; KEGG: sdy:SDY_1936 thiosulfate:cyanide sulfurtransferase (rhodanese); rhodanese domain-containing protein 359424..359762 Tolumonas auensis DSM 9187 7884698 YP_002891538.1 CDS Tola_0322 NC_012691.1 359770 360378 R PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: gbm:Gbem_0757 methyltransferase type 11; type 12 methyltransferase complement(359770..360378) Tolumonas auensis DSM 9187 7884699 YP_002891539.1 CDS Tola_0323 NC_012691.1 360443 361036 R KEGG: aeh:Mlg_1406 methyltransferase type 11; methyltransferase type 11 complement(360443..361036) Tolumonas auensis DSM 9187 7884700 YP_002891540.1 CDS Tola_0324 NC_012691.1 361155 362216 D PFAM: conserved hypothetical protein; KEGG: pap:PSPA7_6170 hypothetical protein; hypothetical protein 361155..362216 Tolumonas auensis DSM 9187 7884701 YP_002891541.1 CDS Tola_0325 NC_012691.1 362352 362828 R PFAM: Ferritin Dps family protein; KEGG: bba:Bd1236 DNA-binding stress protein; ferritin Dps family protein complement(362352..362828) Tolumonas auensis DSM 9187 7884136 YP_002891542.1 CDS Tola_0326 NC_012691.1 363278 364099 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: asa:ASA_3565 HAD superfamily hydrolase; cof family hydrolase complement(363278..364099) Tolumonas auensis DSM 9187 7884137 YP_002891543.1 CDS Tola_0327 NC_012691.1 364318 365127 D KEGG: mfa:Mfla_2527 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 364318..365127 Tolumonas auensis DSM 9187 7884138 YP_002891544.1 CDS Tola_0328 NC_012691.1 370745 371233 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: aha:AHA_0618 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 370745..371233 Tolumonas auensis DSM 9187 7884144 YP_002891545.1 CDS Tola_0329 NC_012691.1 371380 371763 D PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: reu:Reut_A3217 calcium-binding EF-hand; calcium-binding domain-containing protein 371380..371763 Tolumonas auensis DSM 9187 7884145 YP_002891546.1 CDS Tola_0330 NC_012691.1 371800 372810 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(371800..372810) Tolumonas auensis DSM 9187 7884146 YP_002891547.1 CDS ubiB NC_012691.1 372833 374464 R an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB complement(372833..374464) Tolumonas auensis DSM 9187 7884147 YP_002891548.1 CDS Tola_0332 NC_012691.1 374461 375081 R KEGG: aha:AHA_0085 hypothetical protein; hypothetical protein complement(374461..375081) Tolumonas auensis DSM 9187 7884148 YP_002891549.1 CDS Tola_0333 NC_012691.1 375106 375849 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: asa:ASA_4309 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; ubiquinone/menaquinone biosynthesis methyltransferase complement(375106..375849) Tolumonas auensis DSM 9187 7884149 YP_002891550.1 CDS Tola_0334 NC_012691.1 376528 376698 R hypothetical protein complement(376528..376698) Tolumonas auensis DSM 9187 7884150 YP_002891551.1 CDS Tola_0335 NC_012691.1 376739 377398 D TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: asa:ASA_0187 hypothetical protein; hypothetical protein 376739..377398 Tolumonas auensis DSM 9187 7884151 YP_002891552.1 CDS Tola_0336 NC_012691.1 377707 380439 D KEGG: aha:AHA_0196 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease; DNA polymerase I 377707..380439 Tolumonas auensis DSM 9187 7884152 YP_002891553.1 CDS engB NC_012691.1 380483 381121 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(380483..381121) Tolumonas auensis DSM 9187 7884153 YP_002891554.1 CDS Tola_0338 NC_012691.1 381278 381523 R hypothetical protein complement(381278..381523) Tolumonas auensis DSM 9187 7884154 YP_002891555.1 CDS Tola_0339 NC_012691.1 381637 382047 D KEGG: aha:AHA_3969 hypothetical protein; hypothetical protein 381637..382047 Tolumonas auensis DSM 9187 7884155 YP_002891556.1 CDS Tola_0340 NC_012691.1 382373 383041 R KEGG: abu:Abu_1030 hypothetical protein; hypothetical protein complement(382373..383041) Tolumonas auensis DSM 9187 7884156 YP_002891557.1 CDS Tola_0341 NC_012691.1 383045 385207 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: vfm:VFMJ11_A1069 VgrG protein; ImpA family type VI secretion-associated protein complement(383045..385207) Tolumonas auensis DSM 9187 7884157 YP_002891558.1 CDS Tola_0342 NC_012691.1 385297 385815 R TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: vfm:VFMJ11_A1070 hemolysin co-regulated protein; type VI secretion system effector complement(385297..385815) Tolumonas auensis DSM 9187 7884158 YP_002891559.1 CDS Tola_0343 NC_012691.1 386123 386707 R PFAM: cytochrome B561; KEGG: shw:Sputw3181_0211 cytochrome b561; cytochrome B561 complement(386123..386707) Tolumonas auensis DSM 9187 7884159 YP_002891560.1 CDS Tola_0344 NC_012691.1 386908 388164 R involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT complement(386908..388164) Tolumonas auensis DSM 9187 7884160 YP_002891561.1 CDS Tola_0345 NC_012691.1 388410 388679 R PFAM: protein of unknown function DUF156; KEGG: rpi:Rpic_2938 protein of unknown function DUF156; hypothetical protein complement(388410..388679) Tolumonas auensis DSM 9187 7884161 YP_002891562.1 CDS Tola_0346 NC_012691.1 388779 389771 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aha:AHA_0626 heavy metal transporter; cation diffusion facilitator family transporter 388779..389771 Tolumonas auensis DSM 9187 7884162 YP_002891563.1 CDS Tola_0347 NC_012691.1 389826 391811 R PFAM: peptidase M48 Ste24p; KEGG: cja:CJA_0922 Zn-dependent protease with chaperone function; peptidase M48 Ste24p complement(389826..391811) Tolumonas auensis DSM 9187 7884163 YP_002891564.1 CDS Tola_0348 NC_012691.1 391824 392420 R PFAM: LemA family protein; KEGG: cja:CJA_0923 hypothetical protein; LemA family protein complement(391824..392420) Tolumonas auensis DSM 9187 7884164 YP_002891565.1 CDS Tola_0349 NC_012691.1 392583 394772 R TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: aha:AHA_0220 DNA helicase II; DNA helicase II complement(392583..394772) Tolumonas auensis DSM 9187 7884165 YP_002891566.1 CDS trkD NC_012691.1 394916 396784 R Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup complement(394916..396784) Tolumonas auensis DSM 9187 7884166 YP_002891567.1 CDS Tola_0351 NC_012691.1 396802 397494 R hypothetical protein complement(396802..397494) Tolumonas auensis DSM 9187 7884167 YP_002891568.1 CDS Tola_0352 NC_012691.1 397764 399155 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2909 outer membrane protein OprM; NodT family RND efflux system outer membrane lipoprotein complement(397764..399155) Tolumonas auensis DSM 9187 7884168 YP_002891569.1 CDS Tola_0353 NC_012691.1 399148 402294 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aha:AHA_2910 AcrB protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(399148..402294) Tolumonas auensis DSM 9187 7884169 YP_002891570.1 CDS Tola_0354 NC_012691.1 402312 403502 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gme:Gmet_0809 secretion protein HlyD; RND family efflux transporter MFP subunit complement(402312..403502) Tolumonas auensis DSM 9187 7884170 YP_002891571.1 CDS Tola_0355 NC_012691.1 403716 404324 D PFAM: regulatory protein TetR; KEGG: azo:azo0243 TetR family transcriptional regulator; TetR family transcriptional regulator 403716..404324 Tolumonas auensis DSM 9187 7884171 YP_002891572.1 CDS Tola_0356 NC_012691.1 404299 407595 R KEGG: lch:Lcho_3018 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(404299..407595) Tolumonas auensis DSM 9187 7884172 YP_002891573.1 CDS Tola_0357 NC_012691.1 407724 408497 R PFAM: type II secretion system protein N; KEGG: aha:AHA_0579 type II secretion system protein N; type II secretion system protein N complement(407724..408497) Tolumonas auensis DSM 9187 7884173 YP_002891574.1 CDS Tola_0358 NC_012691.1 408502 408981 R PFAM: General secretion pathway M protein; KEGG: cps:CPS_4582 general secretion pathway protein M; general secretion pathway protein M complement(408502..408981) Tolumonas auensis DSM 9187 7884174 YP_002891575.1 CDS Tola_0359 NC_012691.1 408978 410165 R TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: aha:AHA_0577 general secretion pathway protein L; general secretion pathway protein L complement(408978..410165) Tolumonas auensis DSM 9187 7884175 YP_002891576.1 CDS Tola_0360 NC_012691.1 410162 411145 R PFAM: General secretion pathway protein K; KEGG: aha:AHA_0576 general secretion pathway protein K; General secretion pathway protein K complement(410162..411145) Tolumonas auensis DSM 9187 7884176 YP_002891577.1 CDS Tola_0361 NC_012691.1 411142 411789 R TIGRFAM: general secretion pathway protein J; KEGG: asa:ASA_3781 general secretion pathway protein J; general secretion pathway protein J complement(411142..411789) Tolumonas auensis DSM 9187 7884177 YP_002891578.1 CDS Tola_0362 NC_012691.1 411796 412143 R TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: asa:ASA_3780 general secretion pathway protein I; general secretion pathway protein I complement(411796..412143) Tolumonas auensis DSM 9187 7884178 YP_002891579.1 CDS Tola_0363 NC_012691.1 412155 412817 R TIGRFAM: general secretion pathway protein H; KEGG: ecf:ECH74115_B0007 general secretion pathway protein H; general secretion pathway protein H complement(412155..412817) Tolumonas auensis DSM 9187 7884179 YP_002891580.1 CDS Tola_0364 NC_012691.1 412817 413257 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: asa:ASA_3778 general secretion pathway protein G; general secretion pathway protein G complement(412817..413257) Tolumonas auensis DSM 9187 7884180 YP_002891581.1 CDS Tola_0365 NC_012691.1 413287 414507 R TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: aha:AHA_0571 general secretion pathway protein F; general secretion pathway protein F complement(413287..414507) Tolumonas auensis DSM 9187 7884181 YP_002891582.1 CDS Tola_0366 NC_012691.1 414509 416011 R KEGG: aha:AHA_0570 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E complement(414509..416011) Tolumonas auensis DSM 9187 7884182 YP_002891583.1 CDS Tola_0367 NC_012691.1 416011 418068 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aha:AHA_0569 general secretion pathway protein D; general secretion pathway protein D complement(416011..418068) Tolumonas auensis DSM 9187 7884183 YP_002891584.1 CDS Tola_0369 NC_012691.1 418438 419442 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: asa:ASA_2543 AraC family transcriptional regulator; AraC family transcriptional regulator complement(418438..419442) Tolumonas auensis DSM 9187 7884185 YP_002891585.1 CDS Tola_0370 NC_012691.1 419741 420589 R TIGRFAM: general secretion pathway protein C; KEGG: aha:AHA_0568 general secretion pathway protein C; general secretion pathway protein C complement(419741..420589) Tolumonas auensis DSM 9187 7884186 YP_002891586.1 CDS nudE NC_012691.1 420775 421365 D ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 420775..421365 Tolumonas auensis DSM 9187 7884187 YP_002891587.1 CDS Tola_0372 NC_012691.1 421362 422066 R KEGG: pap:PSPA7_6229 hypothetical protein; hypothetical protein complement(421362..422066) Tolumonas auensis DSM 9187 7884188 YP_002891588.1 CDS Tola_0373 NC_012691.1 422066 424228 R KEGG: pap:PSPA7_6231 hypothetical protein; hypothetical protein complement(422066..424228) Tolumonas auensis DSM 9187 7884189 YP_002891589.1 CDS Tola_0374 NC_012691.1 424335 425237 R specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(424335..425237) Tolumonas auensis DSM 9187 7884190 YP_002891590.1 CDS Tola_0375 NC_012691.1 425333 425956 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_28110 arginine exporter protein ArgO; lysine exporter protein LysE/YggA 425333..425956 Tolumonas auensis DSM 9187 7884191 YP_002891591.1 CDS Tola_0376 NC_012691.1 426067 426498 D PFAM: heat shock protein Hsp20; KEGG: afr:AFE_2086 heat shock protein, HSP20 family; heat shock protein Hsp20 426067..426498 Tolumonas auensis DSM 9187 7884192 YP_002891592.1 CDS Tola_0377 NC_012691.1 426555 427658 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(426555..427658) Tolumonas auensis DSM 9187 7884193 YP_002891593.1 CDS Tola_0378 NC_012691.1 428051 429904 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vha:VIBHAR_00261 phosphatidylglycerophosphatase; TonB-dependent receptor 428051..429904 Tolumonas auensis DSM 9187 7884194 YP_002891594.1 CDS Tola_0379 NC_012691.1 429983 431890 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(429983..431890) Tolumonas auensis DSM 9187 7884195 YP_002891595.1 CDS Tola_0380 NC_012691.1 432149 433522 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: aha:AHA_2430 divalent anion:Na+ symporter (DASS) family protein; anion transporter complement(432149..433522) Tolumonas auensis DSM 9187 7884196 YP_002891596.1 CDS Tola_0381 NC_012691.1 433586 434062 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: aha:AHA_1232 anaerobic ribonucleotide reductase-activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(433586..434062) Tolumonas auensis DSM 9187 7884197 YP_002891597.1 CDS Tola_0382 NC_012691.1 434183 434917 R PFAM: carbonic anhydrase; KEGG: aha:AHA_3404 carbonic anhydrase; Carbonate dehydratase complement(434183..434917) Tolumonas auensis DSM 9187 7884198 YP_002891598.1 CDS Tola_0383 NC_012691.1 435037 435990 R TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: aha:AHA_3768 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase complement(435037..435990) Tolumonas auensis DSM 9187 7884199 YP_002891599.1 CDS Tola_0384 NC_012691.1 436123 437568 D TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: aha:AHA_3767 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; rfaE bifunctional protein 436123..437568 Tolumonas auensis DSM 9187 7884200 YP_002891600.1 CDS Tola_0385 NC_012691.1 437689 438963 D PFAM: Ferric reductase domain protein transmembrane component domain; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding 8 domain protein; KEGG: pae:PA0545 hypothetical protein; ferric reductase domain-containing transmembrane protein 437689..438963 Tolumonas auensis DSM 9187 7884201 YP_002891601.1 CDS Tola_0386 NC_012691.1 438981 439931 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: ajs:Ajs_1367 potassium-tellurite ethidium and proflavin transporter; potassium-tellurite ethidium and proflavin transporter complement(438981..439931) Tolumonas auensis DSM 9187 7884202 YP_002891602.1 CDS Tola_0387 NC_012691.1 440020 441333 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: asa:ASA_0523 outer membrane protein TolC; TolC family type I secretion outer membrane protein complement(440020..441333) Tolumonas auensis DSM 9187 7884203 YP_002891603.1 CDS Tola_0388 NC_012691.1 441353 442489 R PFAM: ABC-2 type transporter; KEGG: rce:RC1_2058 ABC transporter, permease protein, putative; ABC transporter complement(441353..442489) Tolumonas auensis DSM 9187 7884204 YP_002891604.1 CDS Tola_0389 NC_012691.1 442498 443424 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb0182 ABC-type multidrug transport system; ABC transporter complement(442498..443424) Tolumonas auensis DSM 9187 7884205 YP_002891605.1 CDS Tola_0390 NC_012691.1 443428 444384 R PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3452 HlyD family secretion protein; secretion protein HlyD family protein complement(443428..444384) Tolumonas auensis DSM 9187 7884206 YP_002891606.1 CDS Tola_0391 NC_012691.1 444377 445039 R PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: dal:Dalk_2023 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(444377..445039) Tolumonas auensis DSM 9187 7884207 YP_002891607.1 CDS Tola_0392 NC_012691.1 445215 445856 D PFAM: NUDIX hydrolase; KEGG: aha:AHA_3765 hypothetical protein; ADP-ribose diphosphatase 445215..445856 Tolumonas auensis DSM 9187 7884208 YP_002891608.1 CDS Tola_0393 NC_012691.1 445853 446296 D PFAM: protein of unknown function DUF1249; KEGG: asa:ASA_0526 hypothetical protein; hypothetical protein 445853..446296 Tolumonas auensis DSM 9187 7884209 YP_002891609.1 CDS Tola_0394 NC_012691.1 446382 447203 D PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: aha:AHA_3763 Icc protein; calcineurin phosphoesterase 446382..447203 Tolumonas auensis DSM 9187 7884210 YP_002891610.1 CDS Tola_0395 NC_012691.1 447205 447780 D PFAM: protein of unknown function UPF0227; KEGG: aha:AHA_3762 esterase YqiA; hypothetical protein 447205..447780 Tolumonas auensis DSM 9187 7884211 YP_002891611.1 CDS Tola_0396 NC_012691.1 447800 449692 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 447800..449692 Tolumonas auensis DSM 9187 7884212 YP_002891612.1 CDS Tola_0397 NC_012691.1 449767 449967 D KEGG: bxe:Bxe_C0182 hypothetical protein; hypothetical protein 449767..449967 Tolumonas auensis DSM 9187 7884213 YP_002891613.1 CDS Tola_0398 NC_012691.1 449992 451671 R TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: pfl:PFL_3280 sulfate permease protein; sulfate transporter complement(449992..451671) Tolumonas auensis DSM 9187 7884214 YP_002891614.1 CDS Tola_0399 NC_012691.1 451930 452154 D KEGG: ppw:PputW619_5074 hypothetical protein; hypothetical protein 451930..452154 Tolumonas auensis DSM 9187 7884215 YP_002891615.1 CDS Tola_0400 NC_012691.1 452408 452668 D TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; KEGG: apj:APJL_1393 oxaloacetate decarboxylase subunit gamma; sodium pump decarboxylase, gamma subunit 452408..452668 Tolumonas auensis DSM 9187 7884216 YP_002891616.1 CDS Tola_0401 NC_012691.1 452691 454496 D catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 452691..454496 Tolumonas auensis DSM 9187 7885352 YP_002891617.1 CDS Tola_0402 NC_012691.1 454510 455811 D KEGG: efe:EFER_0028 oxalacetate decarboxylase beta chain; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 454510..455811 Tolumonas auensis DSM 9187 7885353 YP_002891618.1 CDS Tola_0403 NC_012691.1 455881 456399 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: hch:HCH_06669 transcriptional regulator; transcriptional regulator, MarR family complement(455881..456399) Tolumonas auensis DSM 9187 7885354 YP_002891619.1 CDS Tola_0404 NC_012691.1 456499 457350 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_1538 drug/metabolite exporter family transporter; hypothetical protein 456499..457350 Tolumonas auensis DSM 9187 7885355 YP_002891620.1 CDS Tola_0405 NC_012691.1 457403 457684 R KEGG: aha:AHA_3835 transcriptional activator HlyU; transcriptional activator HlyU complement(457403..457684) Tolumonas auensis DSM 9187 7885356 YP_002891621.1 CDS Tola_0406 NC_012691.1 457871 459223 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: azo:azo0062 hypothetical protein; hypothetical protein 457871..459223 Tolumonas auensis DSM 9187 7885357 YP_002891622.1 CDS Tola_0407 NC_012691.1 459267 460199 R TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: ecq:ECED1_1926 6-phosphofructokinase II; 6-phosphofructokinase complement(459267..460199) Tolumonas auensis DSM 9187 7885358 YP_002891623.1 CDS Tola_0408 NC_012691.1 460227 460562 R KEGG: tbd:Tbd_1197 hypothetical protein; hypothetical protein complement(460227..460562) Tolumonas auensis DSM 9187 7885359 YP_002891624.1 CDS Tola_0409 NC_012691.1 460736 462097 D PFAM: PAS fold-3 domain protein; KEGG: tbd:Tbd_1411 diguanylate cyclase; putative PAS/PAC sensor protein 460736..462097 Tolumonas auensis DSM 9187 7885360 YP_002891625.1 CDS Tola_0410 NC_012691.1 462098 462763 R hypothetical protein complement(462098..462763) Tolumonas auensis DSM 9187 7885361 YP_002891626.1 CDS Tola_0411 NC_012691.1 463268 464608 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3577 glucarate transporter; major facilitator superfamily protein 463268..464608 Tolumonas auensis DSM 9187 7885362 YP_002891627.1 CDS Tola_0412 NC_012691.1 464703 465632 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rfr:Rfer_0441 LysR family transcriptional regulator; LysR family transcriptional regulator complement(464703..465632) Tolumonas auensis DSM 9187 7885363 YP_002891628.1 CDS Tola_0413 NC_012691.1 466108 467007 D Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha 466108..467007 Tolumonas auensis DSM 9187 7885364 YP_002891629.1 CDS Tola_0414 NC_012691.1 467004 467612 D Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta 467004..467612 Tolumonas auensis DSM 9187 7885365 YP_002891630.1 CDS Tola_0415 NC_012691.1 467828 468706 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cko:CKO_03358 hypothetical protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 467828..468706 Tolumonas auensis DSM 9187 7885366 YP_002891631.1 CDS Tola_0416 NC_012691.1 468966 470588 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 468966..470588 Tolumonas auensis DSM 9187 7885367 YP_002891632.1 CDS Tola_0417 NC_012691.1 470660 471064 D hypothetical protein 470660..471064 Tolumonas auensis DSM 9187 7885368 YP_002891633.1 CDS Tola_0418 NC_012691.1 471118 473241 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(471118..473241) Tolumonas auensis DSM 9187 7885369 YP_002891634.1 CDS Tola_0419 NC_012691.1 473575 475182 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(473575..475182) Tolumonas auensis DSM 9187 7885370 YP_002891635.1 CDS Tola_0420 NC_012691.1 475436 476335 R PFAM: Hsp33 protein; KEGG: asa:ASA_3772 33 kDa chaperonin; Hsp33 protein complement(475436..476335) Tolumonas auensis DSM 9187 7885371 YP_002891636.1 CDS Tola_0421 NC_012691.1 476378 476776 R PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: sgl:SG2315 heat shock protein; RNA-binding S4 domain-containing protein complement(476378..476776) Tolumonas auensis DSM 9187 7885372 YP_002891637.1 CDS Tola_0422 NC_012691.1 476971 477603 D PFAM: Glutathione S-transferase domain; KEGG: aha:AHA_3900 stringent starvation protein A; glutathione S-transferase 476971..477603 Tolumonas auensis DSM 9187 7885373 YP_002891638.1 CDS Tola_0423 NC_012691.1 477603 478043 D PFAM: Stringent starvation protein B; KEGG: aha:AHA_3899 stringent starvation protein B; stringent starvation protein B 477603..478043 Tolumonas auensis DSM 9187 7885374 YP_002891639.1 CDS Tola_0424 NC_012691.1 478088 478666 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: aha:AHA_3898 secreted protein; transport-associated complement(478088..478666) Tolumonas auensis DSM 9187 7885375 YP_002891640.1 CDS Tola_0425 NC_012691.1 478683 479261 R KEGG: asa:ASA_0341 phosphoheptose isomerase; phosphoheptose isomerase complement(478683..479261) Tolumonas auensis DSM 9187 7885376 YP_002891641.1 CDS Tola_0426 NC_012691.1 479272 479646 R PFAM: protein of unknown function UPF0102; KEGG: aha:AHA_3896 hypothetical protein; hypothetical protein complement(479272..479646) Tolumonas auensis DSM 9187 7885377 YP_002891642.1 CDS Tola_0427 NC_012691.1 479600 481477 R PFAM: LppC family lipoprotein; KEGG: asa:ASA_0343 LppC family lipoprotein; LppC family lipoprotein complement(479600..481477) Tolumonas auensis DSM 9187 7885378 YP_002891643.1 CDS Tola_0428 NC_012691.1 481559 482404 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aha:AHA_3894 tetrapyrrole methylase family protein; uroporphyrin-III C/tetrapyrrole methyltransferase 481559..482404 Tolumonas auensis DSM 9187 7885379 YP_002891644.1 CDS Tola_0429 NC_012691.1 482832 484208 R TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: aha:AHA_0527 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase complement(482832..484208) Tolumonas auensis DSM 9187 7885381 YP_002891645.1 CDS Tola_0430 NC_012691.1 484196 485122 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: aha:AHA_0528 O-succinylbenzoic acid (OSB) synthetase; mandelate racemase/muconate lactonizing protein complement(484196..485122) Tolumonas auensis DSM 9187 7885382 YP_002891646.1 CDS Tola_0431 NC_012691.1 485218 486078 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(485218..486078) Tolumonas auensis DSM 9187 7885383 YP_002891647.1 CDS Tola_0432 NC_012691.1 486091 486837 R PFAM: alpha/beta hydrolase fold; KEGG: asa:ASA_3736 hydrolase or acyltransferase; alpha/beta hydrolase fold protein complement(486091..486837) Tolumonas auensis DSM 9187 7885384 YP_002891648.1 CDS Tola_0433 NC_012691.1 486834 488555 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(486834..488555) Tolumonas auensis DSM 9187 7885385 YP_002891649.1 CDS Tola_0434 NC_012691.1 488548 489867 R TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: asa:ASA_3738 menaquinone-specific isochorismate synthase; isochorismate synthase complement(488548..489867) Tolumonas auensis DSM 9187 7885386 YP_002891650.1 CDS Tola_0435 NC_012691.1 490064 490984 D TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: asa:ASA_3739 1,4-dihydroxy-2-naphthoateoctaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 490064..490984 Tolumonas auensis DSM 9187 7885387 YP_002891651.1 CDS Tola_0436 NC_012691.1 491032 491652 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vpa:VP2973 homoserine/homoserine lactone efflux protein; lysine exporter protein LysE/YggA 491032..491652 Tolumonas auensis DSM 9187 7885388 YP_002891652.1 CDS Tola_0437 NC_012691.1 491801 492373 D PFAM: protein of unknown function DUF414; KEGG: aha:AHA_0270 hypothetical protein; hypothetical protein 491801..492373 Tolumonas auensis DSM 9187 7885389 YP_002891653.1 CDS Tola_0438 NC_012691.1 492495 492740 D hypothetical protein 492495..492740 Tolumonas auensis DSM 9187 7885390 YP_002891654.1 CDS Tola_0439 NC_012691.1 492803 493846 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: vfi:VF_0608 LacI family DNA-binding transcriptional repressor; transcriptional regulator, LacI family complement(492803..493846) Tolumonas auensis DSM 9187 7885391 YP_002891655.1 CDS Tola_0440 NC_012691.1 494172 494948 D PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: spe:Spro_0997 DeoR family transcriptional regulator; Cro/CI family transcriptional regulator 494172..494948 Tolumonas auensis DSM 9187 7885392 YP_002891656.1 CDS Tola_0441 NC_012691.1 495088 496461 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 495088..496461 Tolumonas auensis DSM 9187 7885393 YP_002891657.1 CDS Tola_0442 NC_012691.1 496674 498050 D KEGG: mmw:Mmwyl1_3280 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 496674..498050 Tolumonas auensis DSM 9187 7885394 YP_002891658.1 CDS Tola_0443 NC_012691.1 498291 499328 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: cvi:CV_2309 protein-N p-phosphohistidine-sugar phosphotransferase; PTS system fructose subfamily transporter subunit IIC 498291..499328 Tolumonas auensis DSM 9187 7885395 YP_002891659.1 CDS Tola_0444 NC_012691.1 499348 499647 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; KEGG: cvi:CV_2310 PTS system, fructose-like-2 IIB component 1; PTS system fructose-specific transporter subunit IIB 499348..499647 Tolumonas auensis DSM 9187 7885396 YP_002891660.1 CDS Tola_0445 NC_012691.1 499681 502182 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, fructose subfamily, IIA subunit; PFAM: PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; KEGG: cvi:CV_2311 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 499681..502182 Tolumonas auensis DSM 9187 7885397 YP_002891661.1 CDS Tola_0446 NC_012691.1 502201 503055 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRA2717 putative transcriptional regulator; AraC family transcriptional regulator complement(502201..503055) Tolumonas auensis DSM 9187 7885398 YP_002891662.1 CDS Tola_0447 NC_012691.1 503269 503796 D PFAM: 17 kDa surface antigen; KEGG: ypy:YPK_1877 17 kDa surface antigen; 17 kDa surface antigen 503269..503796 Tolumonas auensis DSM 9187 7885399 YP_002891663.1 CDS Tola_0448 NC_012691.1 503855 504757 R PFAM: ROK family protein; KEGG: asa:ASA_0476 ROK family protein; ROK family protein complement(503855..504757) Tolumonas auensis DSM 9187 7885400 YP_002891664.1 CDS Tola_0449 NC_012691.1 504832 505149 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: yen:YE4105 putative phosphotransferase protein; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit complement(504832..505149) Tolumonas auensis DSM 9187 7885401 YP_002891665.1 CDS Tola_0450 NC_012691.1 505159 506541 R PFAM: glycoside hydrolase family 1; KEGG: asa:ASA_0478 glycoside hydrolase family protein; Beta-glucosidase complement(505159..506541) Tolumonas auensis DSM 9187 7885402 YP_002891666.1 CDS Tola_0451 NC_012691.1 506615 507934 R KEGG: esa:ESA_02023 hypothetical protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC complement(506615..507934) Tolumonas auensis DSM 9187 7885403 YP_002891667.1 CDS Tola_0452 NC_012691.1 507962 508267 R PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB2008 PTS system cellobiose-specific IIB component; PTS system lactose/cellobiose-specific transporter subunit IIB complement(507962..508267) Tolumonas auensis DSM 9187 7885404 YP_002891668.1 CDS Tola_0453 NC_012691.1 508510 509817 D KEGG: ppr:PBPRB2009 phosphotransferase systemcellobiose-specific component IIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 508510..509817 Tolumonas auensis DSM 9187 7885405 YP_002891669.1 CDS Tola_0454 NC_012691.1 509929 510915 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: asa:ASA_0474 LacI family transcription regulator; transcriptional regulator, LacI family 509929..510915 Tolumonas auensis DSM 9187 7885406 YP_002891670.1 CDS Tola_0455 NC_012691.1 510943 511062 R hypothetical protein complement(510943..511062) Tolumonas auensis DSM 9187 7885407 YP_002891671.1 CDS Tola_0456 NC_012691.1 511337 512761 R KEGG: aha:AHA_0274 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; Fis family nitrogen metabolism transcriptional regulator NtrC complement(511337..512761) Tolumonas auensis DSM 9187 7885408 YP_002891672.1 CDS glnL NC_012691.1 512776 513828 R sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) complement(512776..513828) Tolumonas auensis DSM 9187 7885409 YP_002891673.1 CDS Tola_0458 NC_012691.1 513927 514469 R KEGG: aha:AHA_0276 hypothetical protein; hypothetical protein complement(513927..514469) Tolumonas auensis DSM 9187 7885410 YP_002891674.1 CDS Tola_0459 NC_012691.1 514579 515988 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aha:AHA_0277 glutamine synthetase, type I; glutamine synthetase, type I complement(514579..515988) Tolumonas auensis DSM 9187 7885411 YP_002891675.1 CDS Tola_0460 NC_012691.1 516334 518160 D TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: asa:ASA_4119 GTP-binding protein TypA; GTP-binding protein TypA 516334..518160 Tolumonas auensis DSM 9187 7885412 YP_002891676.1 CDS Tola_0461 NC_012691.1 518259 519167 D TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: asa:ASA_4118 ribonuclease BN; ribonuclease BN 518259..519167 Tolumonas auensis DSM 9187 7885413 YP_002891677.1 CDS Tola_0462 NC_012691.1 519246 519566 R highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein complement(519246..519566) Tolumonas auensis DSM 9187 7885414 YP_002891678.1 CDS Tola_0463 NC_012691.1 519722 522001 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 519722..522001 Tolumonas auensis DSM 9187 7885415 YP_002891679.1 CDS Tola_0464 NC_012691.1 522014 522736 D KEGG: aha:AHA_3740 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 522014..522736 Tolumonas auensis DSM 9187 7885416 YP_002891680.1 CDS Tola_0465 NC_012691.1 522836 523501 D PFAM: SNARE associated Golgi protein; KEGG: aha:AHA_2446 DedA protein; hypothetical protein 522836..523501 Tolumonas auensis DSM 9187 7885417 YP_002891681.1 CDS Tola_0466 NC_012691.1 523740 524891 D PFAM: major facilitator superfamily MFS_1; KEGG: asa:ASA_3327 major facilitator superfamily permease BdhT; major facilitator superfamily protein 523740..524891 Tolumonas auensis DSM 9187 7885418 YP_002891682.1 CDS Tola_0467 NC_012691.1 524899 525819 D PFAM: Auxin Efflux Carrier; KEGG: pat:Patl_2785 auxin efflux carrier; auxin efflux carrier family protein 524899..525819 Tolumonas auensis DSM 9187 7885419 YP_002891683.1 CDS Tola_0468 NC_012691.1 525884 526123 D KEGG: saz:Sama_0799 hypothetical protein; hypothetical protein 525884..526123 Tolumonas auensis DSM 9187 7885420 YP_002891684.1 CDS Tola_0469 NC_012691.1 526188 527519 R KEGG: aha:AHA_4115 ATP-dependent protease ATP-binding subunit; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU complement(526188..527519) Tolumonas auensis DSM 9187 7885421 YP_002891685.1 CDS Tola_0470 NC_012691.1 527545 528087 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(527545..528087) Tolumonas auensis DSM 9187 7885422 YP_002891686.1 CDS Tola_0471 NC_012691.1 528238 529281 R PFAM: Sporulation domain protein; KEGG: spe:Spro_4791 cell division protein FtsN; sporulation domain-containing protein complement(528238..529281) Tolumonas auensis DSM 9187 7885423 YP_002891687.1 CDS Tola_0472 NC_012691.1 529285 531027 R KEGG: aha:AHA_4112 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(529285..531027) Tolumonas auensis DSM 9187 7885424 YP_002891688.1 CDS Tola_0473 NC_012691.1 531287 531871 D PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: aha:AHA_4111 ATP-dependent protease La; peptidase S16 lon domain-containing protein 531287..531871 Tolumonas auensis DSM 9187 7885425 YP_002891689.1 CDS Tola_0474 NC_012691.1 532022 532600 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: asa:ASA_0204 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 532022..532600 Tolumonas auensis DSM 9187 7885426 YP_002891690.1 CDS Tola_0475 NC_012691.1 532593 533249 D TIGRFAM: anti-sigma factor, , ChrR family; KEGG: aha:AHA_4109 transcriptional activator ChrR; anti-ECFsigma factor ChrR 532593..533249 Tolumonas auensis DSM 9187 7885427 YP_002891691.1 CDS Tola_0476 NC_012691.1 533197 534147 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: saz:Sama_2520 putative transcriptional regulator; LysR family transcriptional regulator complement(533197..534147) Tolumonas auensis DSM 9187 7885428 YP_002891692.1 CDS Tola_0477 NC_012691.1 534302 535186 D TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA4274 putative carbon-nitrogen hydrolase; N-carbamoylputrescine amidase 534302..535186 Tolumonas auensis DSM 9187 7885429 YP_002891693.1 CDS Tola_0478 NC_012691.1 535215 536309 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 535215..536309 Tolumonas auensis DSM 9187 7885430 YP_002891694.1 CDS Tola_0479 NC_012691.1 536360 539665 R KEGG: rfr:Rfer_3572 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(536360..539665) Tolumonas auensis DSM 9187 7885431 YP_002891695.1 CDS Tola_0480 NC_012691.1 539673 541877 R KEGG: asa:ASA_0128 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' complement(539673..541877) Tolumonas auensis DSM 9187 7885432 YP_002891696.1 CDS Tola_0481 NC_012691.1 542021 542233 D TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: asu:Asuc_0525 50S ribosomal protein L31; 50S ribosomal protein L31 542021..542233 Tolumonas auensis DSM 9187 7883296 YP_002891697.1 CDS Tola_0482 NC_012691.1 542439 543683 D PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: aha:AHA_4195 NADP-dependent malic enzyme; malate dehydrogenase 542439..543683 Tolumonas auensis DSM 9187 7883297 YP_002891698.1 CDS Tola_0483 NC_012691.1 543742 544872 R PFAM: porin Gram-negative type; KEGG: aha:AHA_0463 hypothetical protein; porin Gram-negative type complement(543742..544872) Tolumonas auensis DSM 9187 7883298 YP_002891699.1 CDS glpX NC_012691.1 545106 546113 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 545106..546113 Tolumonas auensis DSM 9187 7883299 YP_002891700.1 CDS Tola_0485 NC_012691.1 546192 546578 R KEGG: eta:ETA_32730 conserved hypothetical protein YhhK; hypothetical protein complement(546192..546578) Tolumonas auensis DSM 9187 7883300 YP_002891701.1 CDS Tola_0486 NC_012691.1 546670 548136 R TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tmz:Tmz1t_0843 glutamate synthase, NADH/NADPH, small subunit; glutamate synthase NADH/NADPH small subunit complement(546670..548136) Tolumonas auensis DSM 9187 7883301 YP_002891702.1 CDS Tola_0487 NC_012691.1 548136 552770 R PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: dar:Daro_0217 glutamate synthase (NADH) large subunit; Glutamate synthase (ferredoxin) complement(548136..552770) Tolumonas auensis DSM 9187 7883302 YP_002891703.1 CDS Tola_0488 NC_012691.1 553317 554225 D Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 553317..554225 Tolumonas auensis DSM 9187 7883303 YP_002891704.1 CDS Tola_0489 NC_012691.1 554308 555408 D KEGG: aha:AHA_1150 putative RNA 2'-O-ribose methyltransferase; putative RNA 2'-O-ribose methyltransferase 554308..555408 Tolumonas auensis DSM 9187 7883304 YP_002891705.1 CDS Tola_0490 NC_012691.1 555475 556257 R PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: aha:AHA_1153 exodeoxyribonuclease IX; 5'-3' exonuclease complement(555475..556257) Tolumonas auensis DSM 9187 7883305 YP_002891706.1 CDS Tola_0491 NC_012691.1 556261 557613 R PFAM: conserved hypothetical protein; KEGG: asa:ASA_3181 lysine decarboxylase family protein; hypothetical protein complement(556261..557613) Tolumonas auensis DSM 9187 7883306 YP_002891707.1 CDS Tola_0492 NC_012691.1 557664 559910 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: asa:ASA_3179 hypothetical protein; hypothetical protein complement(557664..559910) Tolumonas auensis DSM 9187 7883307 YP_002891708.1 CDS queF NC_012691.1 559987 560838 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(559987..560838) Tolumonas auensis DSM 9187 7883308 YP_002891709.1 CDS Tola_0494 NC_012691.1 560890 561471 D PFAM: Syd family protein; KEGG: asa:ASA_3177 syd protein; Syd family protein 560890..561471 Tolumonas auensis DSM 9187 7883309 YP_002891710.1 CDS Tola_0495 NC_012691.1 561437 561751 R KEGG: asa:ASA_3175 hypothetical protein; hypothetical protein complement(561437..561751) Tolumonas auensis DSM 9187 7883310 YP_002891711.1 CDS Tola_0496 NC_012691.1 561785 562210 R KEGG: pin:Ping_0832 hypothetical protein; hypothetical protein complement(561785..562210) Tolumonas auensis DSM 9187 7883311 YP_002891712.1 CDS Tola_0497 NC_012691.1 562288 562623 D PFAM: protein of unknown function DUF446; KEGG: asa:ASA_3171 hypothetical protein; hypothetical protein 562288..562623 Tolumonas auensis DSM 9187 7883312 YP_002891713.1 CDS Tola_0498 NC_012691.1 562620 563348 D PFAM: pseudouridine synthase; KEGG: asa:ASA_3170 tRNA pseudouridine synthase C; pseudouridine synthase 562620..563348 Tolumonas auensis DSM 9187 7883313 YP_002891714.1 CDS Tola_0499 NC_012691.1 563406 563741 R hypothetical protein complement(563406..563741) Tolumonas auensis DSM 9187 7883314 YP_002891715.1 CDS Tola_0500 NC_012691.1 563943 564755 R member of the FNT family of formate and nitrite transporters; nitrite transporter NirC complement(563943..564755) Tolumonas auensis DSM 9187 7883315 YP_002891716.1 CDS nirD NC_012691.1 564758 565087 R involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit complement(564758..565087) Tolumonas auensis DSM 9187 7883316 YP_002891717.1 CDS Tola_0502 NC_012691.1 565084 567633 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: asa:ASA_0196 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit complement(565084..567633) Tolumonas auensis DSM 9187 7883317 YP_002891718.1 CDS Tola_0503 NC_012691.1 567637 568680 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: slo:Shew_1070 oxidoreductase FAD-binding subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(567637..568680) Tolumonas auensis DSM 9187 7883318 YP_002891719.1 CDS Tola_0504 NC_012691.1 568756 570417 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(568756..570417) Tolumonas auensis DSM 9187 7883319 YP_002891720.1 CDS Tola_0505 NC_012691.1 570591 571823 R PFAM: Peptidase M23; KEGG: aha:AHA_0292 M23B family non-peptidase protein; peptidase M23 complement(570591..571823) Tolumonas auensis DSM 9187 7883320 YP_002891721.1 CDS Tola_0506 NC_012691.1 571857 573395 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(571857..573395) Tolumonas auensis DSM 9187 7883321 YP_002891722.1 CDS Tola_0507 NC_012691.1 573597 574028 D PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aha:AHA_0294 rhodanese domain-containing protein; rhodanese domain-containing protein 573597..574028 Tolumonas auensis DSM 9187 7883322 YP_002891723.1 CDS Tola_0508 NC_012691.1 574079 574552 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 574079..574552 Tolumonas auensis DSM 9187 7883323 YP_002891724.1 CDS gpsA NC_012691.1 574552 575556 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 574552..575556 Tolumonas auensis DSM 9187 7883324 YP_002891725.1 CDS Tola_0510 NC_012691.1 575630 576208 R cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein complement(575630..576208) Tolumonas auensis DSM 9187 7883325 YP_002891726.1 CDS Tola_0511 NC_012691.1 576279 576989 R KEGG: aha:AHA_0298 ComF family protein; ComF family protein complement(576279..576989) Tolumonas auensis DSM 9187 7883326 YP_002891727.1 CDS Tola_0512 NC_012691.1 577072 578553 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dar:Daro_0054 ammonium transporter; ammonium transporter complement(577072..578553) Tolumonas auensis DSM 9187 7883327 YP_002891728.1 CDS Tola_0513 NC_012691.1 578909 579694 D TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: aha:AHA_0299 putative pimeloyl-BioC--CoA transferase BioH; bioH protein 578909..579694 Tolumonas auensis DSM 9187 7883328 YP_002891729.1 CDS Tola_0514 NC_012691.1 579785 582088 R PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: aha:AHA_0303 S1 RNA-binding domain-containing protein; RNA binding S1 domain-containing protein complement(579785..582088) Tolumonas auensis DSM 9187 7883329 YP_002891730.1 CDS Tola_0515 NC_012691.1 582112 582597 R TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: saz:Sama_3509 GreA/GreB family elongation factor; transcription elongation factor GreB complement(582112..582597) Tolumonas auensis DSM 9187 7883330 YP_002891731.1 CDS Tola_0516 NC_012691.1 582933 583391 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 582933..583391 Tolumonas auensis DSM 9187 7883331 YP_002891732.1 CDS Tola_0517 NC_012691.1 583410 584336 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aha:AHA_3892 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 583410..584336 Tolumonas auensis DSM 9187 7883332 YP_002891733.1 CDS Tola_0518 NC_012691.1 584339 584650 D TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: aha:AHA_3891 cell division protein FtsL; cell division protein FtsL 584339..584650 Tolumonas auensis DSM 9187 7883333 YP_002891734.1 CDS Tola_0519 NC_012691.1 584647 586407 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: asa:ASA_0392 peptidoglycan synthetase FtsI; peptidoglycan glycosyltransferase 584647..586407 Tolumonas auensis DSM 9187 7883334 YP_002891735.1 CDS Tola_0520 NC_012691.1 586391 587860 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: aha:AHA_3889 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 586391..587860 Tolumonas auensis DSM 9187 7883335 YP_002891736.1 CDS Tola_0521 NC_012691.1 587857 589236 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: aha:AHA_3888 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 587857..589236 Tolumonas auensis DSM 9187 7883336 YP_002891737.1 CDS Tola_0522 NC_012691.1 589230 590312 D KEGG: asa:ASA_0395 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4; phospho-N-acetylmuramoyl-pentapeptide- transferase 589230..590312 Tolumonas auensis DSM 9187 7883337 YP_002891738.1 CDS Tola_0523 NC_012691.1 590319 591611 D TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: aha:AHA_3886 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 590319..591611 Tolumonas auensis DSM 9187 7883338 YP_002891739.1 CDS Tola_0524 NC_012691.1 591632 592786 D TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: asa:ASA_0397 cell division protein FtsW; cell division protein FtsW 591632..592786 Tolumonas auensis DSM 9187 7883339 YP_002891740.1 CDS murG NC_012691.1 592783 593850 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 592783..593850 Tolumonas auensis DSM 9187 7883340 YP_002891741.1 CDS murC NC_012691.1 593869 595323 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 593869..595323 Tolumonas auensis DSM 9187 7883341 YP_002891742.1 CDS Tola_0527 NC_012691.1 595500 596273 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: asa:ASA_0400 cell division protein FtsQ; cell division protein FtsQ 595500..596273 Tolumonas auensis DSM 9187 7883342 YP_002891743.1 CDS Tola_0528 NC_012691.1 596233 597489 D TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: asa:ASA_0401 cell division protein FtsA; cell division protein FtsA 596233..597489 Tolumonas auensis DSM 9187 7883343 YP_002891744.1 CDS Tola_0529 NC_012691.1 597530 598690 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: asa:ASA_0402 cell division protein FtsZ; cell division protein FtsZ 597530..598690 Tolumonas auensis DSM 9187 7883344 YP_002891745.1 CDS lpxC NC_012691.1 598827 599750 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 598827..599750 Tolumonas auensis DSM 9187 7883345 YP_002891746.1 CDS Tola_0531 NC_012691.1 599747 599878 R hypothetical protein complement(599747..599878) Tolumonas auensis DSM 9187 7883346 YP_002891747.1 CDS Tola_0532 NC_012691.1 600002 602725 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: aha:AHA_3877 preprotein translocase, SecA subunit; Preprotein translocase subunit SecA 600002..602725 Tolumonas auensis DSM 9187 7883347 YP_002891748.1 CDS Tola_0533 NC_012691.1 602794 603192 D TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: slo:Shew_3444 mutator MutT protein; mutator MutT protein 602794..603192 Tolumonas auensis DSM 9187 7883348 YP_002891749.1 CDS Tola_0534 NC_012691.1 603189 603407 R PFAM: protein of unknown function DUF329; KEGG: ppg:PputGB1_0676 zinc-binding protein; hypothetical protein complement(603189..603407) Tolumonas auensis DSM 9187 7883349 YP_002891750.1 CDS Tola_0535 NC_012691.1 603456 604073 R KEGG: asa:ASA_0410 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(603456..604073) Tolumonas auensis DSM 9187 7883350 YP_002891751.1 CDS Tola_0536 NC_012691.1 604073 604933 R PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: aha:AHA_3871 prepilin peptidase; prepilin peptidase complement(604073..604933) Tolumonas auensis DSM 9187 7883351 YP_002891752.1 CDS Tola_0537 NC_012691.1 604963 606219 R PFAM: type II secretion system protein; KEGG: aha:AHA_3870 type 4 fimbrial assembly protein PilC; type II secretion system protein complement(604963..606219) Tolumonas auensis DSM 9187 7883352 YP_002891753.1 CDS Tola_0538 NC_012691.1 606238 607944 R TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: aha:AHA_3869 type IV-A pilus assembly ATPase PilB; type IV-A pilus assembly ATPase PilB complement(606238..607944) Tolumonas auensis DSM 9187 7883353 YP_002891754.1 CDS Tola_0539 NC_012691.1 608024 608467 R KEGG: pin:Ping_0478 prepilin peptidase dependent protein D; prepilin peptidase dependent protein D complement(608024..608467) Tolumonas auensis DSM 9187 7883354 YP_002891755.1 CDS Tola_0540 NC_012691.1 608764 610050 R KEGG: aha:AHA_0840 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; phosphoribosylamine/glycine ligase complement(608764..610050) Tolumonas auensis DSM 9187 7883355 YP_002891756.1 CDS Tola_0541 NC_012691.1 610414 612006 R KEGG: vch:VC0276 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(610414..612006) Tolumonas auensis DSM 9187 7883356 YP_002891757.1 CDS Tola_0542 NC_012691.1 612054 612296 D hypothetical protein 612054..612296 Tolumonas auensis DSM 9187 7883357 YP_002891758.1 CDS Tola_0543 NC_012691.1 612468 612719 D PFAM: protein of unknown function DUF172; KEGG: sed:SeD_B0116 putative stability protein StbD; hypothetical protein 612468..612719 Tolumonas auensis DSM 9187 7883358 YP_002891759.1 CDS Tola_0544 NC_012691.1 612709 612990 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: sed:SeD_B0115 putative stability protein StbE; RelE/StbE family addiction module toxin 612709..612990 Tolumonas auensis DSM 9187 7883359 YP_002891760.1 CDS Tola_0545 NC_012691.1 613283 613756 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: aha:AHA_3606 bkd operon transcriptional regulator; transcriptional regulator, AsnC family complement(613283..613756) Tolumonas auensis DSM 9187 7883360 YP_002891761.1 CDS Tola_0546 NC_012691.1 613873 614043 R hypothetical protein complement(613873..614043) Tolumonas auensis DSM 9187 7883361 YP_002891762.1 CDS Tola_0547 NC_012691.1 614066 615733 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(614066..615733) Tolumonas auensis DSM 9187 7883362 YP_002891763.1 CDS Tola_0548 NC_012691.1 616134 616655 D PFAM: RDD domain containing protein; KEGG: asa:ASA_3826 hypothetical protein; RDD domain-containing protein 616134..616655 Tolumonas auensis DSM 9187 7883364 YP_002891764.1 CDS Tola_0549 NC_012691.1 616698 617768 R PFAM: permease YjgP/YjgQ family protein; KEGG: aha:AHA_3698 putative permease; YjgP/YjgQ family permease complement(616698..617768) Tolumonas auensis DSM 9187 7883365 YP_002891765.1 CDS Tola_0550 NC_012691.1 617768 618871 R PFAM: permease YjgP/YjgQ family protein; KEGG: aha:AHA_3699 putative permease; YjgP/YjgQ family permease complement(617768..618871) Tolumonas auensis DSM 9187 7883366 YP_002891766.1 CDS Tola_0551 NC_012691.1 619037 620539 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 619037..620539 Tolumonas auensis DSM 9187 7883367 YP_002891767.1 CDS Tola_0552 NC_012691.1 620552 621031 D PFAM: DNA polymerase III chi subunit HolC; KEGG: pat:Patl_3563 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 620552..621031 Tolumonas auensis DSM 9187 7883368 YP_002891768.1 CDS Tola_0553 NC_012691.1 621050 623902 D TIGRFAM: valyl-tRNA synthetase; KEGG: aha:AHA_3702 valyl-tRNA synthetase; valyl-tRNA synthetase 621050..623902 Tolumonas auensis DSM 9187 7883369 YP_002891769.1 CDS Tola_0554 NC_012691.1 623948 624841 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dar:Daro_2792 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(623948..624841) Tolumonas auensis DSM 9187 7883370 YP_002891770.1 CDS Tola_0555 NC_012691.1 624959 625501 D PFAM: cytochrome B561; KEGG: dar:Daro_2794 cytochrome b561; cytochrome B561 624959..625501 Tolumonas auensis DSM 9187 7883371 YP_002891771.1 CDS Tola_0556 NC_012691.1 625501 626061 D PFAM: YceI family protein; KEGG: dar:Daro_2795 YceI; hypothetical protein 625501..626061 Tolumonas auensis DSM 9187 7883372 YP_002891772.1 CDS Tola_0557 NC_012691.1 626093 626671 D PFAM: YceI family protein; KEGG: cvi:CV_3276 hypothetical protein; hypothetical protein 626093..626671 Tolumonas auensis DSM 9187 7883373 YP_002891773.1 CDS Tola_0558 NC_012691.1 626774 627496 D PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0758 pirin domain protein; Pirin domain-containing protein 626774..627496 Tolumonas auensis DSM 9187 7883374 YP_002891774.1 CDS Tola_0559 NC_012691.1 627564 629027 R KEGG: ypy:YPK_3295 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase complement(627564..629027) Tolumonas auensis DSM 9187 7883375 YP_002891775.1 CDS Tola_0560 NC_012691.1 629054 630130 R KEGG: pin:Ping_0191 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(629054..630130) Tolumonas auensis DSM 9187 7883376 YP_002891776.1 CDS Tola_0561 NC_012691.1 630782 631774 D PFAM: protein of unknown function DUF1611; KEGG: hypothetical protein; hypothetical protein 630782..631774 Tolumonas auensis DSM 9187 7886426 YP_002891777.1 CDS Tola_0562 NC_012691.1 631789 632772 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3116 putative mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 631789..632772 Tolumonas auensis DSM 9187 7886427 YP_002891778.1 CDS Tola_0563 NC_012691.1 632806 633666 D PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; class IV aminotransferase 632806..633666 Tolumonas auensis DSM 9187 7886428 YP_002891779.1 CDS Tola_0564 NC_012691.1 633823 635211 D TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: psa:PST_2182 probable sodium:alanine symporter; amino acid carrier protein 633823..635211 Tolumonas auensis DSM 9187 7886429 YP_002891780.1 CDS Tola_0565 NC_012691.1 635447 636010 D TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_3501 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; peroxiredoxin 635447..636010 Tolumonas auensis DSM 9187 7886430 YP_002891781.1 CDS Tola_0566 NC_012691.1 636082 637647 D TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfo:Pfl01_2924 pyridine nucleotide-disulphide oxidoreductase class-II; alkyl hydroperoxide reductase 636082..637647 Tolumonas auensis DSM 9187 7886431 YP_002891782.1 CDS Tola_0567 NC_012691.1 637969 638178 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: vvy:VV1504 cold shock protein; cold-shock DNA-binding domain-containing protein 637969..638178 Tolumonas auensis DSM 9187 7886432 YP_002891783.1 CDS Tola_0568 NC_012691.1 638246 638902 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: kpe:KPK_1850 putative metal-dependent phosphohydrolase; metal dependent phosphohydrolase complement(638246..638902) Tolumonas auensis DSM 9187 7886433 YP_002891784.1 CDS Tola_0569 NC_012691.1 639088 639507 D PFAM: RbsD or FucU transport; KEGG: vsa:VSAL_I1372 high affinity ribose transport protein RbsD; transport protein RbsD/FucU 639088..639507 Tolumonas auensis DSM 9187 7886434 YP_002891785.1 CDS Tola_0570 NC_012691.1 639519 640445 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: spe:Spro_4897 ribokinase; ribokinase 639519..640445 Tolumonas auensis DSM 9187 7886435 YP_002891786.1 CDS Tola_0571 NC_012691.1 640764 641183 D PFAM: RbsD or FucU transport; KEGG: vsa:VSAL_I1372 high affinity ribose transport protein RbsD; transport protein RbsD/FucU 640764..641183 Tolumonas auensis DSM 9187 7886436 YP_002891787.1 CDS Tola_0572 NC_012691.1 641192 642694 D with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 641192..642694 Tolumonas auensis DSM 9187 7886437 YP_002891788.1 CDS rbsC NC_012691.1 642691 643677 D functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 642691..643677 Tolumonas auensis DSM 9187 7886438 YP_002891789.1 CDS Tola_0574 NC_012691.1 643700 644587 D periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 643700..644587 Tolumonas auensis DSM 9187 7886439 YP_002891790.1 CDS Tola_0575 NC_012691.1 644641 645564 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: ypb:YPTS_4163 ribokinase; ribokinase 644641..645564 Tolumonas auensis DSM 9187 7886440 YP_002891791.1 CDS Tola_0576 NC_012691.1 645570 646574 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: spe:Spro_4896 transcriptional repressor RbsR; transcriptional regulator, LacI family 645570..646574 Tolumonas auensis DSM 9187 7886441 YP_002891792.1 CDS Tola_0577 NC_012691.1 646654 647598 D PFAM: ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_07000 ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 646654..647598 Tolumonas auensis DSM 9187 7886442 YP_002891793.1 CDS Tola_0578 NC_012691.1 647582 648394 D KEGG: dar:Daro_1416 hypothetical protein; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 647582..648394 Tolumonas auensis DSM 9187 7886443 YP_002891794.1 CDS Tola_0579 NC_012691.1 648452 649747 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(648452..649747) Tolumonas auensis DSM 9187 7886444 YP_002891795.1 CDS Tola_0580 NC_012691.1 649953 650300 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 649953..650300 Tolumonas auensis DSM 9187 7886445 YP_002891796.1 CDS Tola_0581 NC_012691.1 650361 650558 R KEGG: har:HEAR2171 hypothetical protein; hypothetical protein complement(650361..650558) Tolumonas auensis DSM 9187 7886446 YP_002891797.1 CDS anmK NC_012691.1 650710 651813 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(650710..651813) Tolumonas auensis DSM 9187 7886447 YP_002891798.1 CDS Tola_0583 NC_012691.1 651924 653123 D TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; KEGG: aha:AHA_3117 tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 651924..653123 Tolumonas auensis DSM 9187 7886448 YP_002891799.1 CDS Tola_0584 NC_012691.1 653177 653866 R PFAM: NUDIX hydrolase; KEGG: hch:HCH_06996 ADP-ribose pyrophosphatase; NUDIX hydrolase complement(653177..653866) Tolumonas auensis DSM 9187 7886449 YP_002891800.1 CDS Tola_0585 NC_012691.1 653863 654393 R catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase complement(653863..654393) Tolumonas auensis DSM 9187 7886450 YP_002891801.1 CDS Tola_0586 NC_012691.1 654578 655810 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 654578..655810 Tolumonas auensis DSM 9187 7886451 YP_002891802.1 CDS Tola_0587 NC_012691.1 655817 657853 D TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dal:Dalk_4950 NAD+ synthetase; NAD+ synthetase 655817..657853 Tolumonas auensis DSM 9187 7886452 YP_002891803.1 CDS Tola_0588 NC_012691.1 657919 658116 R PFAM: Heavy metal transport/detoxification protein; KEGG: mpt:Mpe_A1641 chaperonin; heavy metal transport/detoxification protein complement(657919..658116) Tolumonas auensis DSM 9187 7886453 YP_002891804.1 CDS Tola_0589 NC_012691.1 658274 660667 D TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0669 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 658274..660667 Tolumonas auensis DSM 9187 7886454 YP_002891805.1 CDS Tola_0590 NC_012691.1 660670 661107 D KEGG: psa:PST_3614 probable transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator, MerR family 660670..661107 Tolumonas auensis DSM 9187 7886455 YP_002891806.1 CDS Tola_0591 NC_012691.1 661110 661778 R PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: sme:SM_b21208 putative transcriptional regulator, TetR family protein; TetR family transcriptional regulator complement(661110..661778) Tolumonas auensis DSM 9187 7886456 YP_002891807.1 CDS Tola_0592 NC_012691.1 661790 662923 R PFAM: ABC-2 type transporter; KEGG: dar:Daro_0988 hypothetical protein; ABC transporter complement(661790..662923) Tolumonas auensis DSM 9187 7886457 YP_002891808.1 CDS Tola_0593 NC_012691.1 662927 665653 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: dar:Daro_0987 ABC-2:ABC transporter related; ABC transporter complement(662927..665653) Tolumonas auensis DSM 9187 7886458 YP_002891809.1 CDS Tola_0594 NC_012691.1 665658 666635 R PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_0986 secretion protein HlyD; secretion protein HlyD family protein complement(665658..666635) Tolumonas auensis DSM 9187 7886459 YP_002891810.1 CDS Tola_0595 NC_012691.1 666723 667043 R hypothetical protein complement(666723..667043) Tolumonas auensis DSM 9187 7886460 YP_002891811.1 CDS Tola_0596 NC_012691.1 667210 668280 R KEGG: pin:Ping_3712 putative glycoporin; putative glycoporin complement(667210..668280) Tolumonas auensis DSM 9187 7886461 YP_002891812.1 CDS Tola_0597 NC_012691.1 668683 671733 D PFAM: FAD linked oxidase domain protein; KEGG: aha:AHA_2649 FAD linked oxidase; D-lactate dehydrogenase 668683..671733 Tolumonas auensis DSM 9187 7886462 YP_002891813.1 CDS Tola_0598 NC_012691.1 671762 672199 D PFAM: thioesterase superfamily protein; KEGG: aha:AHA_2647 esterase YdiI; thioesterase superfamily protein 671762..672199 Tolumonas auensis DSM 9187 7886463 YP_002891814.1 CDS Tola_0599 NC_012691.1 672427 674355 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: aha:AHA_2646 ATP-dependent RNA helicase; DEAD/DEAH box helicase 672427..674355 Tolumonas auensis DSM 9187 7886464 YP_002891815.1 CDS Tola_0600 NC_012691.1 674498 675709 R PFAM: Fmu (Sun) domain protein; KEGG: vvy:VVA1664 tRNA and rRNA cytosine-C5-methylase; Fmu (Sun) domain-containing protein complement(674498..675709) Tolumonas auensis DSM 9187 7886465 YP_002891816.1 CDS Tola_0601 NC_012691.1 675864 676499 D KEGG: aha:AHA_1408 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 675864..676499 Tolumonas auensis DSM 9187 7886466 YP_002891817.1 CDS Tola_0602 NC_012691.1 676601 680017 R PFAM: MscS Mechanosensitive ion channel; KEGG: aha:AHA_3053 potassium efflux system KefA; mechanosensitive ion channel MscS complement(676601..680017) Tolumonas auensis DSM 9187 7886467 YP_002891818.1 CDS Tola_0603 NC_012691.1 680193 681605 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(680193..681605) Tolumonas auensis DSM 9187 7886468 YP_002891819.1 CDS Tola_0604 NC_012691.1 681970 683400 D TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: eca:ECA2937 femo cofactor biosynthesis protein; nitrogenase cofactor biosynthesis protein NifB 681970..683400 Tolumonas auensis DSM 9187 7886469 YP_002891820.1 CDS Tola_0605 NC_012691.1 683400 683606 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azo:azo0524 ferredoxin; 4Fe-4S ferredoxin 683400..683606 Tolumonas auensis DSM 9187 7886470 YP_002891821.1 CDS Tola_0606 NC_012691.1 683584 684156 D PFAM: NifQ family protein; KEGG: eca:ECA2936 nitrogen fixation protein; NifQ family protein 683584..684156 Tolumonas auensis DSM 9187 7886471 YP_002891822.1 CDS Tola_0607 NC_012691.1 684205 684831 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: glo:Glov_0929 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 684205..684831 Tolumonas auensis DSM 9187 7886472 YP_002891823.1 CDS Tola_0608 NC_012691.1 685108 686421 D TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: asa:ASA_3637 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 685108..686421 Tolumonas auensis DSM 9187 7886473 YP_002891824.1 CDS Tola_0609 NC_012691.1 686556 687050 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: asa:ASA_3407 hypothetical protein; PA-phosphatase like phosphoesterase 686556..687050 Tolumonas auensis DSM 9187 7886474 YP_002891825.1 CDS Tola_0610 NC_012691.1 687062 688159 D KEGG: aha:AHA_0885 glycosyl transferase; glycosyl transferase family protein 687062..688159 Tolumonas auensis DSM 9187 7886475 YP_002891826.1 CDS Tola_0611 NC_012691.1 688524 690242 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: aha:AHA_0887 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 688524..690242 Tolumonas auensis DSM 9187 7886476 YP_002891827.1 CDS ilvH NC_012691.1 690242 690736 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 690242..690736 Tolumonas auensis DSM 9187 7886477 YP_002891828.1 CDS Tola_0613 NC_012691.1 691170 691808 R PFAM: protein of unknown function UPF0126; KEGG: asa:ASA_2663 inner membrane protein YadS; hypothetical protein complement(691170..691808) Tolumonas auensis DSM 9187 7886480 YP_002891829.1 CDS Tola_0614 NC_012691.1 691868 692710 R PFAM: periplasmic binding protein; KEGG: aha:AHA_1704 periplasmic binding protein; periplasmic binding protein complement(691868..692710) Tolumonas auensis DSM 9187 7886481 YP_002891830.1 CDS Tola_0615 NC_012691.1 692774 693466 R PFAM: purine or other phosphorylase family 1; KEGG: pha:PSHAa0547 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MtnN; Adenosylhomocysteine nucleosidase complement(692774..693466) Tolumonas auensis DSM 9187 7886482 YP_002891831.1 CDS Tola_0616 NC_012691.1 693611 694537 D KEGG: aha:AHA_2702 radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 693611..694537 Tolumonas auensis DSM 9187 7886483 YP_002891832.1 CDS Tola_0617 NC_012691.1 694599 696947 D sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 694599..696947 Tolumonas auensis DSM 9187 7886484 YP_002891833.1 CDS dgt NC_012691.1 696973 698340 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 696973..698340 Tolumonas auensis DSM 9187 7886485 YP_002891834.1 CDS rfaH NC_012691.1 698386 698889 R KEGG: aha:AHA_0912 transcriptional activator RfaH; TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; SMART: NGN domain protein; transcriptional activator RfaH complement(698386..698889) Tolumonas auensis DSM 9187 7886486 YP_002891835.1 CDS Tola_0620 NC_012691.1 699049 699780 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vfm:VFMJ11_2226 aerobic respiration control protein ArcA; two-component response regulator complement(699049..699780) Tolumonas auensis DSM 9187 7886487 YP_002891836.1 CDS thrA NC_012691.1 700161 702620 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 700161..702620 Tolumonas auensis DSM 9187 7886488 YP_002891837.1 CDS Tola_0622 NC_012691.1 702624 703580 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 702624..703580 Tolumonas auensis DSM 9187 7886489 YP_002891838.1 CDS Tola_0623 NC_012691.1 703577 704851 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 703577..704851 Tolumonas auensis DSM 9187 7886490 YP_002891839.1 CDS Tola_0624 NC_012691.1 705029 705544 R TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: asa:ASA_3062 glucose-specific PTS system component; PTS system glucose subfamily transporter subunit IIA complement(705029..705544) Tolumonas auensis DSM 9187 7886491 YP_002891840.1 CDS Tola_0625 NC_012691.1 705595 707313 R Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase complement(705595..707313) Tolumonas auensis DSM 9187 7886492 YP_002891841.1 CDS Tola_0626 NC_012691.1 707373 707684 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: asa:ASA_3060 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr complement(707373..707684) Tolumonas auensis DSM 9187 7886493 YP_002891842.1 CDS Tola_0627 NC_012691.1 707926 708894 R TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aha:AHA_3038 cysteine synthase A; cysteine synthase A complement(707926..708894) Tolumonas auensis DSM 9187 7886494 YP_002891843.1 CDS Tola_0628 NC_012691.1 709148 710692 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: asa:ASA_1213 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 709148..710692 Tolumonas auensis DSM 9187 7886495 YP_002891844.1 CDS Tola_0629 NC_012691.1 710757 711491 R PFAM: protein of unknown function DUF540; KEGG: aha:AHA_1226 protein CysZ; hypothetical protein complement(710757..711491) Tolumonas auensis DSM 9187 7886496 YP_002891845.1 CDS Tola_0630 NC_012691.1 711864 712646 D KEGG: esa:ESA_00833 cell division protein ZipA; TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region; SMART: ZipA FtsZ-binding region; cell division protein ZipA 711864..712646 Tolumonas auensis DSM 9187 7886497 YP_002891846.1 CDS Tola_0631 NC_012691.1 712736 714796 D KEGG: aha:AHA_1229 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase 712736..714796 Tolumonas auensis DSM 9187 7886498 YP_002891847.1 CDS Tola_0632 NC_012691.1 715227 719117 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 715227..719117 Tolumonas auensis DSM 9187 7886499 YP_002891848.1 CDS Tola_0633 NC_012691.1 719217 719711 R PFAM: NLP/P60 protein; KEGG: spl:Spea_4200 NLP/P60 protein; NLP/P60 protein complement(719217..719711) Tolumonas auensis DSM 9187 7886500 YP_002891849.1 CDS Tola_0634 NC_012691.1 719708 720265 R PFAM: protein of unknown function DUF1439; KEGG: asa:ASA_1289 lipoprotein; hypothetical protein complement(719708..720265) Tolumonas auensis DSM 9187 7886501 YP_002891850.1 CDS cls NC_012691.1 720366 721829 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 720366..721829 Tolumonas auensis DSM 9187 7886502 YP_002891851.1 CDS Tola_0636 NC_012691.1 721890 723296 D KEGG: asa:ASA_1291 hypothetical protein; hypothetical protein 721890..723296 Tolumonas auensis DSM 9187 7886503 YP_002891852.1 CDS Tola_0637 NC_012691.1 723397 724707 D KEGG: asa:ASA_1291 hypothetical protein; hypothetical protein 723397..724707 Tolumonas auensis DSM 9187 7886504 YP_002891853.1 CDS purU NC_012691.1 724758 725594 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(724758..725594) Tolumonas auensis DSM 9187 7886505 YP_002891854.1 CDS Tola_0639 NC_012691.1 725780 726382 D KEGG: sde:Sde_1463 glutamyl-tRNA synthetase; hypothetical protein 725780..726382 Tolumonas auensis DSM 9187 7886506 YP_002891855.1 CDS Tola_0640 NC_012691.1 726450 726923 D SMART: Water Stress and Hypersensitive response domain protein; KEGG: cja:CJA_3133 putative lipoprotein; Water Stress and Hypersensitive response domain-containing protein 726450..726923 Tolumonas auensis DSM 9187 7884378 YP_002891856.1 CDS Tola_0641 NC_012691.1 727005 727466 R KEGG: aha:AHA_4050 hypothetical protein; hypothetical protein complement(727005..727466) Tolumonas auensis DSM 9187 7884379 YP_002891857.1 CDS Tola_0642 NC_012691.1 727569 728492 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cvi:CV_1724 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(727569..728492) Tolumonas auensis DSM 9187 7884380 YP_002891858.1 CDS Tola_0643 NC_012691.1 728646 729992 D KEGG: sbn:Sbal195_0447 hypothetical protein; hypothetical protein 728646..729992 Tolumonas auensis DSM 9187 7884381 YP_002891859.1 CDS Tola_0644 NC_012691.1 729989 731320 D PFAM: glycosyl transferase family 2; KEGG: shm:Shewmr7_0420 glycosyl transferase, family 2; family 2 glycosyl transferase 729989..731320 Tolumonas auensis DSM 9187 7884382 YP_002891860.1 CDS Tola_0645 NC_012691.1 731322 732395 D KEGG: sbn:Sbal195_0449 hypothetical protein; hypothetical protein 731322..732395 Tolumonas auensis DSM 9187 7884383 YP_002891861.1 CDS Tola_0646 NC_012691.1 732448 733215 D KEGG: cvi:CV_0096 hypothetical protein; hypothetical protein 732448..733215 Tolumonas auensis DSM 9187 7884384 YP_002891862.1 CDS Tola_0647 NC_012691.1 733226 733726 R PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: spe:Spro_2616 thiol peroxidase; redoxin domain-containing protein complement(733226..733726) Tolumonas auensis DSM 9187 7884385 YP_002891863.1 CDS malS NC_012691.1 733906 735972 R periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase complement(733906..735972) Tolumonas auensis DSM 9187 7884386 YP_002891864.1 CDS Tola_0649 NC_012691.1 736076 736261 D hypothetical protein 736076..736261 Tolumonas auensis DSM 9187 7884387 YP_002891865.1 CDS Tola_0650 NC_012691.1 736331 737218 D KEGG: kpe:KPK_1714 nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 736331..737218 Tolumonas auensis DSM 9187 7884388 YP_002891866.1 CDS Tola_0651 NC_012691.1 737288 738736 D TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: kpe:KPK_1713 nitrogenase molybdenum-iron protein alpha chain; nitrogenase molybdenum-iron protein subunit alpha 737288..738736 Tolumonas auensis DSM 9187 7884389 YP_002891867.1 CDS Tola_0652 NC_012691.1 738803 740371 D KEGG: eca:ECA2954 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 738803..740371 Tolumonas auensis DSM 9187 7884390 YP_002891868.1 CDS Tola_0653 NC_012691.1 740498 740710 D TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: eca:ECA2953 nitrogen fixation protein; nitrogen fixation protein FixT 740498..740710 Tolumonas auensis DSM 9187 7884391 YP_002891869.1 CDS Tola_0654 NC_012691.1 740736 741422 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: eca:ECA2952 nitrogen fixation protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 740736..741422 Tolumonas auensis DSM 9187 7884392 YP_002891870.1 CDS Tola_0655 NC_012691.1 741637 743010 D TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; KEGG: eca:ECA2949 nitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogenase MoFe cofactor biosynthesis protein NifE 741637..743010 Tolumonas auensis DSM 9187 7884393 YP_002891871.1 CDS Tola_0656 NC_012691.1 743027 744409 D functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 743027..744409 Tolumonas auensis DSM 9187 7884394 YP_002891872.1 CDS Tola_0657 NC_012691.1 744406 744861 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: kpe:KPK_1707 NifX protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 744406..744861 Tolumonas auensis DSM 9187 7884395 YP_002891873.1 CDS Tola_0658 NC_012691.1 744906 745199 D TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azo:azo0556 ferredoxin; ferredoxin III 744906..745199 Tolumonas auensis DSM 9187 7884396 YP_002891874.1 CDS Tola_0659 NC_012691.1 745281 746519 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: har:HEAR0070 putative oxidoreductase; hypothetical protein complement(745281..746519) Tolumonas auensis DSM 9187 7884397 YP_002891875.1 CDS Tola_0660 NC_012691.1 746757 747107 D KEGG: bha:BH3410 hypothetical protein; hypothetical protein 746757..747107 Tolumonas auensis DSM 9187 7884398 YP_002891876.1 CDS Tola_0661 NC_012691.1 747132 748025 D TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2946 nitrogen fixation protein; Fe-S cluster assembly protein NifU 747132..748025 Tolumonas auensis DSM 9187 7884399 YP_002891877.1 CDS Tola_0662 NC_012691.1 748037 749242 D KEGG: eca:ECA2945 cysteine desulfurase; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; cysteine desulfurase NifS 748037..749242 Tolumonas auensis DSM 9187 7884400 YP_002891878.1 CDS Tola_0663 NC_012691.1 749447 749740 R PFAM: protein of unknown function DUF172; KEGG: efe:EFER_2748 putative antitoxin of the YafO-YafN toxin-antitoxin system; putative antitoxin of the YafO-YafN toxin-antitoxin system complement(749447..749740) Tolumonas auensis DSM 9187 7884401 YP_002891879.1 CDS Tola_0664 NC_012691.1 750133 750771 R hypothetical protein complement(750133..750771) Tolumonas auensis DSM 9187 7884402 YP_002891880.1 CDS Tola_0665 NC_012691.1 750919 752790 R KEGG: she:Shewmr4_2139 hypothetical protein; hypothetical protein complement(750919..752790) Tolumonas auensis DSM 9187 7884403 YP_002891881.1 CDS Tola_0666 NC_012691.1 752884 753666 R KEGG: hypothetical protein; hypothetical protein complement(752884..753666) Tolumonas auensis DSM 9187 7884404 YP_002891882.1 CDS Tola_0667 NC_012691.1 754229 755611 D PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; AAA ATPase; KEGG: aha:AHA_0872 PhoH family protein; PhoH family protein 754229..755611 Tolumonas auensis DSM 9187 7884405 YP_002891883.1 CDS Tola_0668 NC_012691.1 755670 756365 R KEGG: asa:ASA_3417 ABC-type thiamine transporter, ATP binding protein; TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter ATPase complement(755670..756365) Tolumonas auensis DSM 9187 7884406 YP_002891884.1 CDS Tola_0669 NC_012691.1 756368 757975 R TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_3416 ABC-type thiamine transporter, permease protein; thiamine ABC transporter, inner membrane subunit complement(756368..757975) Tolumonas auensis DSM 9187 7884407 YP_002891885.1 CDS Tola_0670 NC_012691.1 757975 758976 R TIGRFAM: thiamine ABC transporter, periplasmic binding protein; ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; KEGG: asa:ASA_3415 ABC-type thiamine transporter, periplasmic binding protein; thiamine ABC transporter, periplasmic binding protein complement(757975..758976) Tolumonas auensis DSM 9187 7884408 YP_002891886.1 CDS Tola_0671 NC_012691.1 759200 759493 D PFAM: type IV pilus assembly PilZ; KEGG: asa:ASA_3414 hypothetical protein; type IV pilus assembly PilZ 759200..759493 Tolumonas auensis DSM 9187 7884409 YP_002891887.1 CDS Tola_0672 NC_012691.1 759460 760452 R KEGG: asa:ASA_3413 hypothetical protein; hypothetical protein complement(759460..760452) Tolumonas auensis DSM 9187 7884410 YP_002891888.1 CDS Tola_0673 NC_012691.1 760437 762146 R PFAM: ABC transporter domain protein; ABC transporter related; SbmABacA family protein; SMART: AAA ATPase; KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components); ABC transporter complement(760437..762146) Tolumonas auensis DSM 9187 7884411 YP_002891889.1 CDS Tola_0674 NC_012691.1 762248 763021 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vsp:VS_II1067 ABC transporter, ATP-binding protein; enterobactin uptake; ABC transporter complement(762248..763021) Tolumonas auensis DSM 9187 7884412 YP_002891890.1 CDS Tola_0675 NC_012691.1 763027 763977 R PFAM: transport system permease protein; KEGG: vsp:VS_II1068 ABC transporter, transmembrane protein; enterobactin uptake; transport system permease complement(763027..763977) Tolumonas auensis DSM 9187 7884413 YP_002891891.1 CDS Tola_0676 NC_012691.1 763970 764929 R PFAM: transport system permease protein; KEGG: vsp:VS_II1070 ABC transporter, transmembrane protein; enterobactin uptake; transport system permease complement(763970..764929) Tolumonas auensis DSM 9187 7884414 YP_002891892.1 CDS Tola_0677 NC_012691.1 764934 765866 R PFAM: periplasmic binding protein; KEGG: vsp:VS_II1071 ABC transporter, periplasmic susbtrate binding protein; enterobactin uptake; periplasmic binding protein complement(764934..765866) Tolumonas auensis DSM 9187 7884415 YP_002891893.1 CDS Tola_0678 NC_012691.1 765924 767849 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: maq:Maqu_3532 TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent receptor complement(765924..767849) Tolumonas auensis DSM 9187 7884416 YP_002891894.1 CDS Tola_0679 NC_012691.1 768082 768681 R TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: aha:AHA_0879 isopropylmalate isomerase small subunit; 3-isopropylmalate dehydratase small subunit complement(768082..768681) Tolumonas auensis DSM 9187 7884417 YP_002891895.1 CDS Tola_0680 NC_012691.1 768693 770090 R TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: vco:VC0395_A2067 isopropylmalate isomerase large subunit; 3-isopropylmalate dehydratase large subunit complement(768693..770090) Tolumonas auensis DSM 9187 7884418 YP_002891896.1 CDS Tola_0681 NC_012691.1 770093 771187 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(770093..771187) Tolumonas auensis DSM 9187 7884419 YP_002891897.1 CDS Tola_0682 NC_012691.1 771187 772752 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(771187..772752) Tolumonas auensis DSM 9187 7884420 YP_002891898.1 CDS Tola_0683 NC_012691.1 773189 774748 D PFAM: protein of unknown function UPF0061; KEGG: mfa:Mfla_1788 hypothetical protein; hypothetical protein 773189..774748 Tolumonas auensis DSM 9187 7884421 YP_002891899.1 CDS Tola_0684 NC_012691.1 774761 775783 R PFAM: beta-lactamase domain protein; KEGG: spe:Spro_0372 hypothetical protein; beta-lactamase domain-containing protein complement(774761..775783) Tolumonas auensis DSM 9187 7884422 YP_002891900.1 CDS Tola_0685 NC_012691.1 775773 776435 R KEGG: afw:Anae109_4237 hypothetical protein; hypothetical protein complement(775773..776435) Tolumonas auensis DSM 9187 7884423 YP_002891901.1 CDS Tola_0686 NC_012691.1 776460 777668 R KEGG: eba:ebA5327 hypothetical protein; hypothetical protein complement(776460..777668) Tolumonas auensis DSM 9187 7884424 YP_002891902.1 CDS Tola_0687 NC_012691.1 777809 778291 R PFAM: protein of unknown function DUF1456; KEGG: vsa:VSAL_I1323 hypothetical protein; hypothetical protein complement(777809..778291) Tolumonas auensis DSM 9187 7884425 YP_002891903.1 CDS Tola_0688 NC_012691.1 778508 778846 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: dar:Daro_0570 PhnA protein; alkylphosphonate utilization operon protein PhnA complement(778508..778846) Tolumonas auensis DSM 9187 7884426 YP_002891904.1 CDS Tola_0689 NC_012691.1 778984 779211 R PFAM: RNA-binding S4 domain protein; KEGG: sdn:Sden_2510 RNA-binding S4; RNA-binding S4 domain-containing protein complement(778984..779211) Tolumonas auensis DSM 9187 7884427 YP_002891905.1 CDS Tola_0690 NC_012691.1 779238 779729 R KEGG: dar:Daro_3622 hypothetical protein; hypothetical protein complement(779238..779729) Tolumonas auensis DSM 9187 7884428 YP_002891906.1 CDS Tola_0691 NC_012691.1 779826 780101 R PFAM: protein of unknown function DUF1294; KEGG: neu:NE0717 cold shock DNA-binding domain-containing protein; hypothetical protein complement(779826..780101) Tolumonas auensis DSM 9187 7884429 YP_002891907.1 CDS Tola_0692 NC_012691.1 780153 780548 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mmw:Mmwyl1_2000 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating GFA complement(780153..780548) Tolumonas auensis DSM 9187 7884430 YP_002891908.1 CDS Tola_0693 NC_012691.1 780646 780930 R hypothetical protein complement(780646..780930) Tolumonas auensis DSM 9187 7884431 YP_002891909.1 CDS Tola_0694 NC_012691.1 780984 781409 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: she:Shewmr4_2298 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating GFA complement(780984..781409) Tolumonas auensis DSM 9187 7884432 YP_002891910.1 CDS Tola_0695 NC_012691.1 781427 781729 R KEGG: yen:YE2498 hypothetical protein; hypothetical protein complement(781427..781729) Tolumonas auensis DSM 9187 7884433 YP_002891911.1 CDS Tola_0696 NC_012691.1 781740 782213 R PFAM: Protein of unknown function DUF1810; KEGG: rle:pRL110425 hypothetical protein; hypothetical protein complement(781740..782213) Tolumonas auensis DSM 9187 7884434 YP_002891912.1 CDS Tola_0697 NC_012691.1 782309 783019 R KEGG: rsq:Rsph17025_3201 hypothetical protein; hypothetical protein complement(782309..783019) Tolumonas auensis DSM 9187 7884435 YP_002891913.1 CDS Tola_0698 NC_012691.1 783012 783572 R SMART: Protein-tyrosine phosphatase, catalytic; KEGG: rsq:Rsph17025_3200 hypothetical protein; dual specificity protein phosphatase complement(783012..783572) Tolumonas auensis DSM 9187 7884436 YP_002891914.1 CDS Tola_0699 NC_012691.1 783679 784425 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_2793 hypothetical protein; type 11 methyltransferase complement(783679..784425) Tolumonas auensis DSM 9187 7884437 YP_002891915.1 CDS Tola_0700 NC_012691.1 784610 784879 D PFAM: Protein of unknown function DUF1778; KEGG: ppr:PBPRB0880 hypothetical protein; hypothetical protein 784610..784879 Tolumonas auensis DSM 9187 7884438 YP_002891916.1 CDS Tola_0701 NC_012691.1 784879 785373 D PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB0879 putative acetyltransferase; N-acetyltransferase GCN5 784879..785373 Tolumonas auensis DSM 9187 7884439 YP_002891917.1 CDS Tola_0702 NC_012691.1 785456 787222 R KEGG: tmz:Tmz1t_0961 hypothetical protein; hypothetical protein complement(785456..787222) Tolumonas auensis DSM 9187 7884440 YP_002891918.1 CDS Tola_0703 NC_012691.1 787328 788047 R PFAM: Integrase catalytic region; KEGG: vsp:VS_1873 transposase (orfB) of insertion sequence ISVisp1 ; IS3 family subgroup IS3; integrase catalytic subunit complement(787328..788047) Tolumonas auensis DSM 9187 7884441 YP_002891919.1 CDS Tola_0704 NC_012691.1 788151 788495 R PFAM: transposase IS3/IS911 family protein; KEGG: abo:ABO_1787 transposase, OrfA; transposase IS3/IS911 family protein complement(788151..788495) Tolumonas auensis DSM 9187 7884442 YP_002891920.1 CDS Tola_0705 NC_012691.1 788570 789601 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mms:mma_0801 RNA-directed DNA polymerase; RNA-directed DNA polymerase complement(788570..789601) Tolumonas auensis DSM 9187 7884443 YP_002891921.1 CDS Tola_0706 NC_012691.1 789830 790180 R hypothetical protein complement(789830..790180) Tolumonas auensis DSM 9187 7884444 YP_002891922.1 CDS Tola_0707 NC_012691.1 790180 791037 R KEGG: mms:mma_0803 hypothetical protein; hypothetical protein complement(790180..791037) Tolumonas auensis DSM 9187 7884445 YP_002891923.1 CDS Tola_0709 NC_012691.1 792016 792171 D hypothetical protein 792016..792171 Tolumonas auensis DSM 9187 7884447 YP_002891924.1 CDS Tola_0710 NC_012691.1 792199 792600 R KEGG: pen:PSEEN2605 hypothetical protein; hypothetical protein complement(792199..792600) Tolumonas auensis DSM 9187 7884448 YP_002891925.1 CDS Tola_0711 NC_012691.1 792772 793602 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_0045 hypothetical protein; hypothetical protein complement(792772..793602) Tolumonas auensis DSM 9187 7884449 YP_002891926.1 CDS Tola_0712 NC_012691.1 793864 794634 R PFAM: peptidase S24 and S26 domain protein; KEGG: son:SO_0641 prophage MuSo1, Cro/CI family transcriptional regulator; putative phage repressor complement(793864..794634) Tolumonas auensis DSM 9187 7884450 YP_002891927.1 CDS Tola_0713 NC_012691.1 794823 795047 D hypothetical protein 794823..795047 Tolumonas auensis DSM 9187 7884451 YP_002891928.1 CDS Tola_0714 NC_012691.1 795044 797269 D PFAM: Integrase catalytic region; MuA-transposase/repressor protein CI DNA-binding; KEGG: sbm:Shew185_2068 integrase catalytic region; integrase catalytic subunit 795044..797269 Tolumonas auensis DSM 9187 7884452 YP_002891929.1 CDS Tola_0715 NC_012691.1 797306 798031 D SMART: AAA ATPase; KEGG: son:SO_0644 prophage MuSo1, DNA transposition protein, putative; ATPase AAA 797306..798031 Tolumonas auensis DSM 9187 7884453 YP_002891930.1 CDS Tola_0716 NC_012691.1 798062 798661 D KEGG: son:SO_0645 hypothetical protein; hypothetical protein 798062..798661 Tolumonas auensis DSM 9187 7884454 YP_002891931.1 CDS Tola_0717 NC_012691.1 798642 799205 D KEGG: son:SO_0646 hypothetical protein; hypothetical protein 798642..799205 Tolumonas auensis DSM 9187 7884455 YP_002891932.1 CDS Tola_0718 NC_012691.1 799202 799432 D hypothetical protein 799202..799432 Tolumonas auensis DSM 9187 7884456 YP_002891933.1 CDS Tola_0719 NC_012691.1 799432 799659 D hypothetical protein 799432..799659 Tolumonas auensis DSM 9187 7884457 YP_002891934.1 CDS Tola_0720 NC_012691.1 799673 800290 D KEGG: sbm:Shew185_2073 hypothetical protein; hypothetical protein 799673..800290 Tolumonas auensis DSM 9187 7884458 YP_002891935.1 CDS Tola_0721 NC_012691.1 800293 800475 D KEGG: ypy:YPK_1203 hypothetical protein; hypothetical protein 800293..800475 Tolumonas auensis DSM 9187 7885757 YP_002891936.1 CDS Tola_0722 NC_012691.1 800490 800765 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_2724 histone-like DNA-binding protein; histone family protein DNA-binding protein 800490..800765 Tolumonas auensis DSM 9187 7885758 YP_002891937.1 CDS Tola_0723 NC_012691.1 800856 801248 D hypothetical protein 800856..801248 Tolumonas auensis DSM 9187 7885759 YP_002891938.1 CDS Tola_0724 NC_012691.1 801245 801778 D KEGG: ypy:YPK_0206 hypothetical protein; hypothetical protein 801245..801778 Tolumonas auensis DSM 9187 7885760 YP_002891939.1 CDS Tola_0725 NC_012691.1 801775 802461 D KEGG: hdu:HD0105 hypothetical protein; hypothetical protein 801775..802461 Tolumonas auensis DSM 9187 7885761 YP_002891940.1 CDS Tola_0726 NC_012691.1 802458 802637 D hypothetical protein 802458..802637 Tolumonas auensis DSM 9187 7885762 YP_002891941.1 CDS Tola_0727 NC_012691.1 802774 802983 D hypothetical protein 802774..802983 Tolumonas auensis DSM 9187 7885763 YP_002891942.1 CDS Tola_0728 NC_012691.1 802964 803554 D PFAM: protein of unknown function DUF1018; KEGG: sbm:Shew185_2076 hypothetical protein; hypothetical protein 802964..803554 Tolumonas auensis DSM 9187 7885764 YP_002891943.1 CDS Tola_0729 NC_012691.1 803650 804072 D PFAM: Mor transcription activator domain protein; KEGG: ecy:ECSE_2596 putative phage transcription regulator; Mor transcription activator domain-containing protein 803650..804072 Tolumonas auensis DSM 9187 7885765 YP_002891944.1 CDS Tola_0730 NC_012691.1 804179 804658 D KEGG: tgr:Tgr7_0379 hypothetical protein; hypothetical protein 804179..804658 Tolumonas auensis DSM 9187 7885766 YP_002891945.1 CDS Tola_0731 NC_012691.1 804742 805287 D PFAM: protein of unknown function DUF847; KEGG: ecy:ECSE_2598 hypothetical protein; hypothetical protein 804742..805287 Tolumonas auensis DSM 9187 7885767 YP_002891946.1 CDS Tola_0732 NC_012691.1 805289 805531 D KEGG: sbn:Sbal195_2128 hypothetical protein; hypothetical protein 805289..805531 Tolumonas auensis DSM 9187 7885768 YP_002891947.1 CDS Tola_0733 NC_012691.1 805521 805799 D KEGG: mes:Meso_0892 hypothetical protein; hypothetical protein 805521..805799 Tolumonas auensis DSM 9187 7885769 YP_002891948.1 CDS Tola_0734 NC_012691.1 805799 806029 D TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: pst:PSPTO_3419 C4-type zinc finger DksA/TraR family protein; TraR/DksA family transcriptional regulator 805799..806029 Tolumonas auensis DSM 9187 7885770 YP_002891949.1 CDS Tola_0735 NC_012691.1 806013 806315 D KEGG: son:SO_2675 hypothetical protein; hypothetical protein 806013..806315 Tolumonas auensis DSM 9187 7885771 YP_002891950.1 CDS Tola_0736 NC_012691.1 806312 806602 D KEGG: ecs:ECs4967 hypothetical protein; hypothetical protein 806312..806602 Tolumonas auensis DSM 9187 7885772 YP_002891951.1 CDS Tola_0737 NC_012691.1 806696 807271 D KEGG: ecy:ECSE_2592 hypothetical protein; hypothetical protein 806696..807271 Tolumonas auensis DSM 9187 7885773 YP_002891952.1 CDS Tola_0738 NC_012691.1 807271 808803 D KEGG: son:SO_2679 prophage MuSo2, portal protein, putative; prophage MuSo2, portal protein 807271..808803 Tolumonas auensis DSM 9187 7885774 YP_002891953.1 CDS Tola_0739 NC_012691.1 808803 810368 D PFAM: protein of unknown function DUF935; KEGG: hdu:HD0124 Mu-like phage GP29; hypothetical protein 808803..810368 Tolumonas auensis DSM 9187 7885775 YP_002891954.1 CDS Tola_0740 NC_012691.1 810368 811834 D KEGG: tgr:Tgr7_1640 F protein (gpF) (protein GP30); hypothetical protein 810368..811834 Tolumonas auensis DSM 9187 7885776 YP_002891955.1 CDS Tola_0741 NC_012691.1 811834 812028 D KEGG: ppr:PBPRB0087 hypothetical protein; hypothetical protein 811834..812028 Tolumonas auensis DSM 9187 7885777 YP_002891956.1 CDS Tola_0742 NC_012691.1 812028 812462 D TIGRFAM: phage virion morphogenesis protein; KEGG: hdu:HD1558 bacteriophage Mu G-like protein; phage virion morphogenesis protein 812028..812462 Tolumonas auensis DSM 9187 7885778 YP_002891957.1 CDS Tola_0743 NC_012691.1 812688 813836 D KEGG: hin:HI1504 I protein; I protein 812688..813836 Tolumonas auensis DSM 9187 7885779 YP_002891958.1 CDS Tola_0744 NC_012691.1 813836 814744 D KEGG: ecy:ECSE_2584 putative phage major head subunit; putative phage major head subunit 813836..814744 Tolumonas auensis DSM 9187 7885780 YP_002891959.1 CDS Tola_0745 NC_012691.1 814785 815090 D hypothetical protein 814785..815090 Tolumonas auensis DSM 9187 7885781 YP_002891960.1 CDS Tola_0746 NC_012691.1 815090 815509 D PFAM: protein of unknown function DUF1320; KEGG: tgr:Tgr7_1635 hypothetical protein; hypothetical protein 815090..815509 Tolumonas auensis DSM 9187 7885782 YP_002891961.1 CDS Tola_0747 NC_012691.1 815506 815934 D KEGG: son:SO_0678 hypothetical protein; hypothetical protein 815506..815934 Tolumonas auensis DSM 9187 7885783 YP_002891962.1 CDS Tola_0748 NC_012691.1 815931 816683 D KEGG: son:SO_0679 hypothetical protein; hypothetical protein 815931..816683 Tolumonas auensis DSM 9187 7885784 YP_002891963.1 CDS Tola_0749 NC_012691.1 816818 820255 D TIGRFAM: phage tape measure protein; KEGG: sbm:Shew185_2103 phage tape measure protein; phage tape measure protein 816818..820255 Tolumonas auensis DSM 9187 7885785 YP_002891964.1 CDS Tola_0750 NC_012691.1 820308 820712 D KEGG: rso:RSc0874 hypothetical protein; hypothetical protein 820308..820712 Tolumonas auensis DSM 9187 7885786 YP_002891965.1 CDS Tola_0751 NC_012691.1 820709 822208 D KEGG: rso:RSc0875 putative transmembrane protein; putative transmembrane protein 820709..822208 Tolumonas auensis DSM 9187 7885787 YP_002891966.1 CDS Tola_0752 NC_012691.1 822220 824358 D KEGG: rso:RSc0875 putative transmembrane protein; putative transmembrane protein 822220..824358 Tolumonas auensis DSM 9187 7885788 YP_002891967.1 CDS Tola_0753 NC_012691.1 824371 824568 D hypothetical protein 824371..824568 Tolumonas auensis DSM 9187 7885789 YP_002891968.1 CDS Tola_0754 NC_012691.1 824584 825765 D KEGG: mca:MCA2673 hypothetical protein; hypothetical protein 824584..825765 Tolumonas auensis DSM 9187 7885790 YP_002891969.1 CDS Tola_0755 NC_012691.1 825762 826736 D KEGG: mca:MCA2674 hypothetical protein; hypothetical protein 825762..826736 Tolumonas auensis DSM 9187 7885791 YP_002891970.1 CDS Tola_0756 NC_012691.1 826733 827137 D KEGG: rso:RSc0878 hypothetical protein; hypothetical protein 826733..827137 Tolumonas auensis DSM 9187 7885792 YP_002891971.1 CDS Tola_0757 NC_012691.1 827141 829180 D KEGG: asa:ASA_1680 hypothetical protein; hypothetical protein 827141..829180 Tolumonas auensis DSM 9187 7885793 YP_002891972.1 CDS Tola_0758 NC_012691.1 829190 829423 D KEGG: asa:ASA_1681 hypothetical protein; hypothetical protein 829190..829423 Tolumonas auensis DSM 9187 7885794 YP_002891973.1 CDS Tola_0759 NC_012691.1 829825 831174 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(829825..831174) Tolumonas auensis DSM 9187 7885796 YP_002891974.1 CDS Tola_0760 NC_012691.1 831264 832142 D KEGG: ppr:PBPRB0335 hypothetical protein; hypothetical protein 831264..832142 Tolumonas auensis DSM 9187 7885797 YP_002891975.1 CDS Tola_0761 NC_012691.1 832240 832596 D PFAM: histidine triad (HIT) protein; KEGG: hso:HS_1134 HIT-like protein; histidine triad (HIT) protein 832240..832596 Tolumonas auensis DSM 9187 7885798 YP_002891976.1 CDS Tola_0762 NC_012691.1 832596 833189 D KEGG: aha:AHA_2596 hypothetical protein; hypothetical protein 832596..833189 Tolumonas auensis DSM 9187 7885799 YP_002891977.1 CDS Tola_0763 NC_012691.1 833186 834016 D PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: asa:ASA_1716 hypothetical protein; aminoglycoside phosphotransferase 833186..834016 Tolumonas auensis DSM 9187 7885800 YP_002891978.1 CDS Tola_0764 NC_012691.1 834074 834406 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: asa:ASA_2799 ribosome-associated protein Y; sigma 54 modulation protein/30S ribosomal protein S30EA complement(834074..834406) Tolumonas auensis DSM 9187 7885801 YP_002891979.1 CDS Tola_0765 NC_012691.1 834735 836648 D PFAM: Lytic transglycosylase catalytic; KEGG: aha:AHA_1560 soluble lytic murein transglycosylase; Lytic transglycosylase catalytic 834735..836648 Tolumonas auensis DSM 9187 7885802 YP_002891980.1 CDS Tola_0766 NC_012691.1 836664 837476 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: asa:ASA_2795 hypothetical protein; NAD-dependent epimerase/dehydratase 836664..837476 Tolumonas auensis DSM 9187 7885803 YP_002891981.1 CDS Tola_0767 NC_012691.1 837476 838321 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: asa:ASA_2792 hypothetical protein; endonuclease/exonuclease/phosphatase 837476..838321 Tolumonas auensis DSM 9187 7885804 YP_002891982.1 CDS Tola_0768 NC_012691.1 838431 840731 D PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aha:AHA_1290 radical SAM domain-containing protein; radical SAM protein 838431..840731 Tolumonas auensis DSM 9187 7885805 YP_002891983.1 CDS Tola_0769 NC_012691.1 840866 841348 D PFAM: Colicin V production protein; KEGG: aha:AHA_1869 CvpA family protein; colicin V production protein 840866..841348 Tolumonas auensis DSM 9187 7885806 YP_002891984.1 CDS Tola_0770 NC_012691.1 841376 842899 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 841376..842899 Tolumonas auensis DSM 9187 7885807 YP_002891985.1 CDS Tola_0771 NC_012691.1 842936 843253 R KEGG: azo:azo1677 hypothetical protein; hypothetical protein complement(842936..843253) Tolumonas auensis DSM 9187 7885808 YP_002891986.1 CDS Tola_0772 NC_012691.1 843417 844196 R PFAM: zinc/iron permease; KEGG: dsh:Dshi_3953 zinc/iron permease; zinc/iron permease complement(843417..844196) Tolumonas auensis DSM 9187 7885809 YP_002891987.1 CDS Tola_0773 NC_012691.1 844249 844725 R PFAM: Ferritin Dps family protein; KEGG: bba:Bd1236 DNA-binding stress protein; ferritin Dps family protein complement(844249..844725) Tolumonas auensis DSM 9187 7885810 YP_002891988.1 CDS Tola_0774 NC_012691.1 844930 845337 R PFAM: phosphate-starvation-inducible E; KEGG: tgr:Tgr7_1458 phosphate-starvation-inducible E; phosphate-starvation-inducible E complement(844930..845337) Tolumonas auensis DSM 9187 7885811 YP_002891989.1 CDS Tola_0775 NC_012691.1 845510 846511 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: sbp:Sbal223_3980 transcriptional regulator, LacI family; transcriptional regulator, LacI family 845510..846511 Tolumonas auensis DSM 9187 7885812 YP_002891990.1 CDS Tola_0776 NC_012691.1 846696 847343 R TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pin:Ping_2930 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(846696..847343) Tolumonas auensis DSM 9187 7885813 YP_002891991.1 CDS Tola_0777 NC_012691.1 847362 849170 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(847362..849170) Tolumonas auensis DSM 9187 7885814 YP_002891992.1 CDS Tola_0778 NC_012691.1 849158 849682 R KEGG: yen:YE4020 putative gluconokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(849158..849682) Tolumonas auensis DSM 9187 7885815 YP_002891993.1 CDS Tola_0779 NC_012691.1 849929 851245 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: yen:YE4021 putative gluconate permease; gluconate transporter 849929..851245 Tolumonas auensis DSM 9187 7885816 YP_002891994.1 CDS Tola_0780 NC_012691.1 851354 851527 D hypothetical protein 851354..851527 Tolumonas auensis DSM 9187 7885817 YP_002891995.1 CDS Tola_0781 NC_012691.1 851520 853073 D PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: pfl:PFL_3597 CBS/transporter associated domain-containing protein; integral membrane protein TerC 851520..853073 Tolumonas auensis DSM 9187 7885818 YP_002891996.1 CDS Tola_0782 NC_012691.1 853092 854867 D KEGG: aha:AHA_1915 hypothetical protein; hypothetical protein 853092..854867 Tolumonas auensis DSM 9187 7885819 YP_002891997.1 CDS Tola_0783 NC_012691.1 854935 855903 R TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: asa:ASA_2850 hypothetical protein; alpha-L-glutamate ligase-like protein complement(854935..855903) Tolumonas auensis DSM 9187 7885820 YP_002891998.1 CDS Tola_0784 NC_012691.1 855908 857419 R KEGG: aha:AHA_1516 gonadoliberin III-related protein; gonadoliberin III-like protein complement(855908..857419) Tolumonas auensis DSM 9187 7885821 YP_002891999.1 CDS Tola_0785 NC_012691.1 857428 858453 R PFAM: protein of unknown function DUF785; KEGG: asa:ASA_2848 ATP-dependent Zn protease; hypothetical protein complement(857428..858453) Tolumonas auensis DSM 9187 7885822 YP_002892000.1 CDS Tola_0786 NC_012691.1 858518 859498 R TIGRFAM: methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 12; Methyltransferase type 11; KEGG: aha:AHA_1518 methyltransferase, putative; methyltransferase complement(858518..859498) Tolumonas auensis DSM 9187 7885823 YP_002892001.1 CDS Tola_0787 NC_012691.1 859495 860235 R TIGRFAM: methyltransferase; PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: asa:ASA_2846 methyltransferase, putative; methyltransferase complement(859495..860235) Tolumonas auensis DSM 9187 7885824 YP_002892002.1 CDS Tola_0788 NC_012691.1 860378 861556 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aha:AHA_3240 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 860378..861556 Tolumonas auensis DSM 9187 7885825 YP_002892003.1 CDS Tola_0789 NC_012691.1 861545 862435 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ecw:EcE24377A_2454 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator complement(861545..862435) Tolumonas auensis DSM 9187 7885826 YP_002892004.1 CDS Tola_0790 NC_012691.1 862626 863228 D PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_C1190 glutathione S-transferase (BphK); glutathione S-transferase 862626..863228 Tolumonas auensis DSM 9187 7885827 YP_002892005.1 CDS Tola_0791 NC_012691.1 863348 865789 D KEGG: aha:AHA_3531 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; helicase-associated domain protein; SMART: helicase domain protein; DEAD-like helicase; ATP-dependent helicase HrpB 863348..865789 Tolumonas auensis DSM 9187 7885828 YP_002892006.1 CDS Tola_0792 NC_012691.1 865806 868109 D TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: aha:AHA_3530 penicillin-binding protein 1B; penicillin-binding protein 1B 865806..868109 Tolumonas auensis DSM 9187 7885829 YP_002892007.1 CDS Tola_0793 NC_012691.1 868255 868821 R TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: aha:AHA_1127 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; DJ-1 family protein complement(868255..868821) Tolumonas auensis DSM 9187 7885830 YP_002892008.1 CDS Tola_0794 NC_012691.1 868830 869735 R KEGG: aha:AHA_1128 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(868830..869735) Tolumonas auensis DSM 9187 7885831 YP_002892009.1 CDS Tola_0795 NC_012691.1 869876 870358 D putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 869876..870358 Tolumonas auensis DSM 9187 7885832 YP_002892010.1 CDS Tola_0796 NC_012691.1 870434 871672 D TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_0128 major facilitator transporter; AmpG-related permease 870434..871672 Tolumonas auensis DSM 9187 7885833 YP_002892011.1 CDS Tola_0797 NC_012691.1 871731 872285 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: aha:AHA_1132 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(871731..872285) Tolumonas auensis DSM 9187 7885834 YP_002892012.1 CDS Tola_0798 NC_012691.1 872285 872857 R PFAM: Uncharacterized lipoprotein; KEGG: aha:AHA_1133 hypothetical protein; lipoprotein complement(872285..872857) Tolumonas auensis DSM 9187 7885835 YP_002892013.1 CDS Tola_0799 NC_012691.1 872866 874002 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: asa:ASA_3201 putative ribosomal RNA small subunit methyltransferase D; rRNA (guanine-N(2)-)-methyltransferase complement(872866..874002) Tolumonas auensis DSM 9187 7885836 YP_002892014.1 CDS Tola_0800 NC_012691.1 874117 874302 R KEGG: asa:ASA_1610 hypothetical protein; hypothetical protein complement(874117..874302) Tolumonas auensis DSM 9187 7885837 YP_002892015.1 CDS Tola_0801 NC_012691.1 874488 874796 D PFAM: BolA family protein; KEGG: amc:MADE_03668 BolA protein; BolA family protein 874488..874796 Tolumonas auensis DSM 9187 7883811 YP_002892016.1 CDS Tola_0802 NC_012691.1 874824 875861 D PFAM: ApbE family lipoprotein; KEGG: aha:AHA_2954 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 874824..875861 Tolumonas auensis DSM 9187 7883812 YP_002892017.1 CDS Tola_0803 NC_012691.1 875964 876890 D PFAM: aldo/keto reductase; KEGG: vch:VCA0859 aldo/keto reductase family oxidoreductase; aldo/keto reductase 875964..876890 Tolumonas auensis DSM 9187 7883813 YP_002892018.1 CDS Tola_0804 NC_012691.1 876960 878015 D PFAM: UMUC domain protein DNA-repair protein; KEGG: aha:AHA_1145 DNA polymerase IV; DNA-directed DNA polymerase 876960..878015 Tolumonas auensis DSM 9187 7883814 YP_002892019.1 CDS Tola_0805 NC_012691.1 878042 879502 R KEGG: asa:ASA_0887 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase complement(878042..879502) Tolumonas auensis DSM 9187 7883815 YP_002892020.1 CDS Tola_0806 NC_012691.1 879578 879868 R hypothetical protein complement(879578..879868) Tolumonas auensis DSM 9187 7883816 YP_002892021.1 CDS Tola_0807 NC_012691.1 880132 881862 D PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: ppr:PBPRB0897 5'-nucleotidase; 5'-nucleotidase 880132..881862 Tolumonas auensis DSM 9187 7883817 YP_002892022.1 CDS Tola_0808 NC_012691.1 881919 882383 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 881919..882383 Tolumonas auensis DSM 9187 7883818 YP_002892023.1 CDS frsA NC_012691.1 882465 883739 D forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 882465..883739 Tolumonas auensis DSM 9187 7883819 YP_002892024.1 CDS Tola_0810 NC_012691.1 883832 884935 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 883832..884935 Tolumonas auensis DSM 9187 7883820 YP_002892025.1 CDS proA NC_012691.1 884948 886207 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 884948..886207 Tolumonas auensis DSM 9187 7883821 YP_002892026.1 CDS Tola_0812 NC_012691.1 886413 886946 D KEGG: aha:AHA_3546 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 886413..886946 Tolumonas auensis DSM 9187 7883822 YP_002892027.1 CDS Tola_0813 NC_012691.1 886985 888073 R PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: spe:Spro_4207 LacI family transcription regulator; transcriptional regulator, LacI family complement(886985..888073) Tolumonas auensis DSM 9187 7883823 YP_002892028.1 CDS Tola_0814 NC_012691.1 888070 889485 R KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase complement(888070..889485) Tolumonas auensis DSM 9187 7883824 YP_002892029.1 CDS Tola_0815 NC_012691.1 889485 890855 R TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: aha:AHA_2979 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC complement(889485..890855) Tolumonas auensis DSM 9187 7883825 YP_002892030.1 CDS Tola_0816 NC_012691.1 891328 892245 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3545 ABC transporter, ATP-binding protein; ABC transporter 891328..892245 Tolumonas auensis DSM 9187 7883826 YP_002892031.1 CDS Tola_0817 NC_012691.1 892242 893015 D PFAM: ABC-2 type transporter; KEGG: aha:AHA_3544 ABC transporter, permease protein; ABC transporter 892242..893015 Tolumonas auensis DSM 9187 7883827 YP_002892032.1 CDS Tola_0818 NC_012691.1 893081 894028 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(893081..894028) Tolumonas auensis DSM 9187 7883828 YP_002892033.1 CDS ipk NC_012691.1 894098 894955 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(894098..894955) Tolumonas auensis DSM 9187 7883829 YP_002892034.1 CDS Tola_0820 NC_012691.1 894955 895539 R TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; KEGG: asa:ASA_1173 outer-membrane lipoprotein LolB; outer membrane lipoprotein LolB complement(894955..895539) Tolumonas auensis DSM 9187 7883830 YP_002892035.1 CDS Tola_0821 NC_012691.1 895649 896911 D KEGG: asa:ASA_1174 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; glutamyl-tRNA reductase 895649..896911 Tolumonas auensis DSM 9187 7883831 YP_002892036.1 CDS Tola_0822 NC_012691.1 896960 898048 D TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: vpa:VP0743 peptide chain release factor 1; peptide chain release factor 1 896960..898048 Tolumonas auensis DSM 9187 7883832 YP_002892037.1 CDS Tola_0823 NC_012691.1 898048 898896 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: aha:AHA_3148 protein methyltransferase HemK; HemK family modification methylase 898048..898896 Tolumonas auensis DSM 9187 7883833 YP_002892038.1 CDS Tola_0824 NC_012691.1 898883 899704 D KEGG: aha:AHA_3146 hypothetical protein; hypothetical protein 898883..899704 Tolumonas auensis DSM 9187 7883834 YP_002892039.1 CDS Tola_0825 NC_012691.1 899716 900567 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 899716..900567 Tolumonas auensis DSM 9187 7883835 YP_002892040.1 CDS Tola_0826 NC_012691.1 900761 902086 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: ypy:YPK_1084 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 900761..902086 Tolumonas auensis DSM 9187 7883836 YP_002892041.1 CDS Tola_0827 NC_012691.1 902132 903856 R TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; KEGG: asa:ASA_0733 prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(902132..903856) Tolumonas auensis DSM 9187 7883837 YP_002892042.1 CDS Tola_0828 NC_012691.1 904053 904793 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: kpe:KPK_3500 PHP domain protein; putative hydrolase 904053..904793 Tolumonas auensis DSM 9187 7883838 YP_002892043.1 CDS Tola_0829 NC_012691.1 904830 905054 R hypothetical protein complement(904830..905054) Tolumonas auensis DSM 9187 7883839 YP_002892044.1 CDS Tola_0830 NC_012691.1 905066 905791 R PFAM: protein of unknown function UPF0066; KEGG: asa:ASA_3055 hypothetical protein; hypothetical protein complement(905066..905791) Tolumonas auensis DSM 9187 7883840 YP_002892045.1 CDS Tola_0831 NC_012691.1 905795 906172 R KEGG: aha:AHA_3031 exopolysaccharide synthesis regulator RcsF; exopolysaccharide synthesis regulator RcsF complement(905795..906172) Tolumonas auensis DSM 9187 7883841 YP_002892046.1 CDS Tola_0832 NC_012691.1 906260 908005 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(906260..908005) Tolumonas auensis DSM 9187 7883842 YP_002892047.1 CDS Tola_0833 NC_012691.1 907998 909782 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(907998..909782) Tolumonas auensis DSM 9187 7883843 YP_002892048.1 CDS Tola_0834 NC_012691.1 915360 915797 D KEGG: aha:AHA_0869 putative pullulanase; putative pullulanase 915360..915797 Tolumonas auensis DSM 9187 7883849 YP_002892049.1 CDS Tola_0835 NC_012691.1 915865 916725 R PFAM: import inner membrane translocase subunit Tim44; KEGG: asa:ASA_3289 import inner membrane translocase; import inner membrane translocase subunit Tim44 complement(915865..916725) Tolumonas auensis DSM 9187 7883850 YP_002892050.1 CDS Tola_0836 NC_012691.1 916909 918360 R TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: yen:YE1643 glucose-specific PTS system IIBC components; PTS system glucose-specific transporter subunit IIBC complement(916909..918360) Tolumonas auensis DSM 9187 7883851 YP_002892051.1 CDS Tola_0837 NC_012691.1 918568 918666 R hypothetical protein complement(918568..918666) Tolumonas auensis DSM 9187 7883852 YP_002892052.1 CDS Tola_0838 NC_012691.1 918832 920274 R TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_1914 glucose-specific PTS system IIBC components; PTS system glucose-specific transporter subunit IIBC complement(918832..920274) Tolumonas auensis DSM 9187 7883853 YP_002892053.1 CDS Tola_0839 NC_012691.1 920722 921621 R TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: asa:ASA_3496 aminomethyltransferase related to GcvT; folate-binding protein YgfZ complement(920722..921621) Tolumonas auensis DSM 9187 7883854 YP_002892054.1 CDS Tola_0840 NC_012691.1 921712 921969 D PFAM: protein of unknown function DUF339; KEGG: aha:AHA_0791 TPR repeat-containing protein; hypothetical protein 921712..921969 Tolumonas auensis DSM 9187 7883855 YP_002892055.1 CDS Tola_0841 NC_012691.1 921938 922324 D KEGG: asa:ASA_3494 hypothetical protein; hypothetical protein 921938..922324 Tolumonas auensis DSM 9187 7883856 YP_002892056.1 CDS Tola_0842 NC_012691.1 922318 923931 R TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: aha:AHA_0793 L-aspartate oxidase; L-aspartate oxidase complement(922318..923931) Tolumonas auensis DSM 9187 7883857 YP_002892057.1 CDS Tola_0843 NC_012691.1 924101 924685 D TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: asa:ASA_3492 RNA polymerase sigma factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 924101..924685 Tolumonas auensis DSM 9187 7883858 YP_002892058.1 CDS Tola_0844 NC_012691.1 924721 925293 D PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: aha:AHA_0795 sigma-E factor negative regulatory protein; anti sigma-E protein, RseA 924721..925293 Tolumonas auensis DSM 9187 7883859 YP_002892059.1 CDS Tola_0845 NC_012691.1 925304 926266 D PFAM: MucB/RseB family protein; KEGG: asa:ASA_3490 sigma-E factor regulatory protein RseB; sigma E regulatory protein MucB/RseB 925304..926266 Tolumonas auensis DSM 9187 7883860 YP_002892060.1 CDS Tola_0846 NC_012691.1 926277 926738 D PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: asa:ASA_3489 sigma-E factor regulatory protein RseC; sigma E positive regulator RseC/MucC 926277..926738 Tolumonas auensis DSM 9187 7883861 YP_002892061.1 CDS Tola_0847 NC_012691.1 926876 928672 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 926876..928672 Tolumonas auensis DSM 9187 7883862 YP_002892062.1 CDS Tola_0848 NC_012691.1 928676 929596 D KEGG: asa:ASA_3487 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 928676..929596 Tolumonas auensis DSM 9187 7883863 YP_002892063.1 CDS Tola_0849 NC_012691.1 929593 930264 D KEGG: asa:ASA_3486 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 929593..930264 Tolumonas auensis DSM 9187 7883864 YP_002892064.1 CDS Tola_0850 NC_012691.1 930261 931163 D TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: aha:AHA_0801 GTP-binding protein Era; GTP-binding protein Era 930261..931163 Tolumonas auensis DSM 9187 7883865 YP_002892065.1 CDS Tola_0851 NC_012691.1 931156 931875 D TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: spe:Spro_3667 DNA repair protein RecO; DNA repair protein RecO 931156..931875 Tolumonas auensis DSM 9187 7883866 YP_002892066.1 CDS Tola_0852 NC_012691.1 931872 932603 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 931872..932603 Tolumonas auensis DSM 9187 7883867 YP_002892067.1 CDS Tola_0853 NC_012691.1 932685 933845 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aha:AHA_1270 ornithine decarboxylase; Ornithine decarboxylase complement(932685..933845) Tolumonas auensis DSM 9187 7883868 YP_002892068.1 CDS Tola_0854 NC_012691.1 934246 935094 R PFAM: protein of unknown function DUF519; KEGG: asa:ASA_3530 protein involved in catabolism of external DNA; hypothetical protein complement(934246..935094) Tolumonas auensis DSM 9187 7883869 YP_002892069.1 CDS Tola_0855 NC_012691.1 935098 937035 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3572 ABC transporter, ATP-binding protein; ABC transporter complement(935098..937035) Tolumonas auensis DSM 9187 7883870 YP_002892070.1 CDS Tola_0856 NC_012691.1 937183 937842 D KEGG: aha:AHA_1000 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 937183..937842 Tolumonas auensis DSM 9187 7883871 YP_002892071.1 CDS Tola_0857 NC_012691.1 937901 938332 R PFAM: ferric-uptake regulator; KEGG: vha:VIBHAR_01339 ferric uptake regulator; ferric uptake regulator, Fur family complement(937901..938332) Tolumonas auensis DSM 9187 7883872 YP_002892072.1 CDS Tola_0858 NC_012691.1 938494 939018 R TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: aha:AHA_1532 flavodoxin; flavodoxin complement(938494..939018) Tolumonas auensis DSM 9187 7883873 YP_002892073.1 CDS Tola_0859 NC_012691.1 939064 939357 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: sec:SC0715 LexA regulated protein; LexA regulated protein complement(939064..939357) Tolumonas auensis DSM 9187 7883874 YP_002892074.1 CDS Tola_0860 NC_012691.1 939465 940250 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: asa:ASA_2819 putative esterase/lipase; alpha/beta hydrolase fold protein complement(939465..940250) Tolumonas auensis DSM 9187 7883875 YP_002892075.1 CDS Tola_0861 NC_012691.1 940562 941074 D PFAM: SeqA family protein; KEGG: asa:ASA_2818 SeqA protein; SeqA family protein 940562..941074 Tolumonas auensis DSM 9187 7883876 YP_002892076.1 CDS Tola_0862 NC_012691.1 941093 942742 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 941093..942742 Tolumonas auensis DSM 9187 7883877 YP_002892077.1 CDS Tola_0863 NC_012691.1 942807 943592 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_2431 ABC-type peptide transporter, ATP-binding protein; ABC transporter complement(942807..943592) Tolumonas auensis DSM 9187 7883878 YP_002892078.1 CDS Tola_0864 NC_012691.1 943589 944587 R KEGG: aha:AHA_1873 peptide ABC transporter, ATP-binding protein SapD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase complement(943589..944587) Tolumonas auensis DSM 9187 7883879 YP_002892079.1 CDS Tola_0865 NC_012691.1 944587 945480 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_1874 peptide ABC transporter, permease protein SapC; binding-protein-dependent transport system inner membrane protein complement(944587..945480) Tolumonas auensis DSM 9187 7883880 YP_002892080.1 CDS Tola_0866 NC_012691.1 945464 946426 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_1875 peptide ABC transporter, permease protein SapB; binding-protein-dependent transport system inner membrane protein complement(945464..946426) Tolumonas auensis DSM 9187 7883881 YP_002892081.1 CDS Tola_0867 NC_012691.1 946430 948043 R PFAM: extracellular solute-binding protein family 5; KEGG: asa:ASA_2427 ABC-type peptide transporter, periplasmic binding protein; family 5 extracellular solute-binding protein complement(946430..948043) Tolumonas auensis DSM 9187 7883882 YP_002892082.1 CDS Tola_0868 NC_012691.1 948194 949606 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: asa:ASA_2422 hypothetical protein; hypothetical protein 948194..949606 Tolumonas auensis DSM 9187 7883883 YP_002892083.1 CDS Tola_0869 NC_012691.1 949603 950670 D PFAM: conserved hypothetical protein; KEGG: asa:ASA_2421 hypothetical protein; hypothetical protein 949603..950670 Tolumonas auensis DSM 9187 7883884 YP_002892084.1 CDS Tola_0870 NC_012691.1 950703 952067 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mfa:Mfla_0715 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(950703..952067) Tolumonas auensis DSM 9187 7883885 YP_002892085.1 CDS Tola_0871 NC_012691.1 952071 952760 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mfa:Mfla_0716 two component transcriptional regulator; two component transcriptional regulator, winged helix family complement(952071..952760) Tolumonas auensis DSM 9187 7883886 YP_002892086.1 CDS Tola_0872 NC_012691.1 952881 953480 R PFAM: lipolytic protein G-D-S-L family; KEGG: asa:ASA_0828 acyl-CoA thioesterase I; lysophospholipase complement(952881..953480) Tolumonas auensis DSM 9187 7883887 YP_002892087.1 CDS Tola_0873 NC_012691.1 953497 954177 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3488 ABC transporter, ATP-binding protein; ABC transporter 953497..954177 Tolumonas auensis DSM 9187 7883888 YP_002892088.1 CDS Tola_0874 NC_012691.1 954174 956609 D PFAM: protein of unknown function DUF214; KEGG: aha:AHA_3487 ABC-type transport system, permease component; hypothetical protein 954174..956609 Tolumonas auensis DSM 9187 7883889 YP_002892089.1 CDS Tola_0875 NC_012691.1 956615 957514 R PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: asa:ASA_0831 putative nucleoside-diphosphate sugar epimerase; hypothetical protein complement(956615..957514) Tolumonas auensis DSM 9187 7883890 YP_002892090.1 CDS Tola_0876 NC_012691.1 957805 958146 R KEGG: cps:CPS_1624 hypothetical protein; hypothetical protein complement(957805..958146) Tolumonas auensis DSM 9187 7883891 YP_002892091.1 CDS Tola_0877 NC_012691.1 958413 960569 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(958413..960569) Tolumonas auensis DSM 9187 7884864 YP_002892092.1 CDS Tola_0878 NC_012691.1 960645 961841 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pin:Ping_2760 acetate kinase; acetate kinase complement(960645..961841) Tolumonas auensis DSM 9187 7884865 YP_002892093.1 CDS Tola_0879 NC_012691.1 962121 962543 D PFAM: protein of unknown function DUF412; KEGG: asa:ASA_3400 hypothetical protein; hypothetical protein 962121..962543 Tolumonas auensis DSM 9187 7884866 YP_002892094.1 CDS Tola_0880 NC_012691.1 962544 963290 R KEGG: kpe:KPK_3629 pyruvate formate-lyase 1-activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme complement(962544..963290) Tolumonas auensis DSM 9187 7884867 YP_002892095.1 CDS Tola_0881 NC_012691.1 963436 965718 R KEGG: asa:ASA_2352 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase complement(963436..965718) Tolumonas auensis DSM 9187 7884868 YP_002892096.1 CDS Tola_0882 NC_012691.1 965772 966602 R TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: asa:ASA_2351 formate transporter 1 FocA; formate/nitrite transporter complement(965772..966602) Tolumonas auensis DSM 9187 7884869 YP_002892097.1 CDS Tola_0883 NC_012691.1 966865 968619 R PFAM: protein of unknown function DUF181; KEGG: aha:AHA_1943 hypothetical protein; hypothetical protein complement(966865..968619) Tolumonas auensis DSM 9187 7884870 YP_002892098.1 CDS Tola_0884 NC_012691.1 968820 969938 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 968820..969938 Tolumonas auensis DSM 9187 7884871 YP_002892099.1 CDS Tola_0885 NC_012691.1 970113 971234 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 970113..971234 Tolumonas auensis DSM 9187 7884872 YP_002892100.1 CDS Tola_0886 NC_012691.1 971261 972037 D KEGG: aha:AHA_1757 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 971261..972037 Tolumonas auensis DSM 9187 7884873 YP_002892101.1 CDS Tola_0887 NC_012691.1 972027 973058 D SMART: helix-turn-helix domain protein; KEGG: aha:AHA_1758 hypothetical protein; XRE family transcriptional regulator 972027..973058 Tolumonas auensis DSM 9187 7884874 YP_002892102.1 CDS Tola_0888 NC_012691.1 973062 974189 D KEGG: kpe:KPK_1275 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 973062..974189 Tolumonas auensis DSM 9187 7884875 YP_002892103.1 CDS hisS NC_012691.1 974294 975571 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 974294..975571 Tolumonas auensis DSM 9187 7884876 YP_002892104.1 CDS Tola_0890 NC_012691.1 975574 976224 D KEGG: asa:ASA_2597 hypothetical protein; hypothetical protein 975574..976224 Tolumonas auensis DSM 9187 7884877 YP_002892105.1 CDS Tola_0891 NC_012691.1 976245 977423 D KEGG: asa:ASA_2596 WD40 domain-containing protein; TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; outer membrane assembly lipoprotein YfgL 976245..977423 Tolumonas auensis DSM 9187 7884878 YP_002892106.1 CDS Tola_0892 NC_012691.1 977499 978995 D TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: asa:ASA_2595 GTP-binding protein EngA; small GTP-binding protein 977499..978995 Tolumonas auensis DSM 9187 7884879 YP_002892107.1 CDS Tola_0893 NC_012691.1 979019 979249 D PFAM: protein of unknown function DUF1407; KEGG: aha:AHA_1764 ubiquitin ligase sinat5; hypothetical protein 979019..979249 Tolumonas auensis DSM 9187 7884880 YP_002892108.1 CDS Tola_0894 NC_012691.1 979318 979698 R stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA complement(979318..979698) Tolumonas auensis DSM 9187 7884881 YP_002892109.1 CDS Tola_0895 NC_012691.1 980035 980706 D TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: vco:VC0395_A1938 uracil-DNA glycosylase; uracil-DNA glycosylase 980035..980706 Tolumonas auensis DSM 9187 7884882 YP_002892110.1 CDS Tola_0896 NC_012691.1 980806 981348 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: asa:ASA_1184 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 980806..981348 Tolumonas auensis DSM 9187 7884883 YP_002892111.1 CDS Tola_0897 NC_012691.1 981389 981577 R KEGG: shw:Sputw3181_3118 hypothetical protein; hypothetical protein complement(981389..981577) Tolumonas auensis DSM 9187 7884884 YP_002892112.1 CDS Tola_0898 NC_012691.1 982016 982786 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_1684 histidine ABC transporter, ATP-binding protein; ABC transporter 982016..982786 Tolumonas auensis DSM 9187 7884885 YP_002892113.1 CDS Tola_0899 NC_012691.1 982817 983584 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_2676 ABC-type histidine/lysine/arginine/ornithine transporter, periplasmic binding protein; family 3 extracellular solute-binding protein 982817..983584 Tolumonas auensis DSM 9187 7884886 YP_002892114.1 CDS Tola_0900 NC_012691.1 983651 984391 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2675 ABC-type histidine/lysine/arginine/ornithine transporter, permease component; polar amino acid ABC transporter inner membrane subunit 983651..984391 Tolumonas auensis DSM 9187 7884887 YP_002892115.1 CDS Tola_0901 NC_012691.1 984397 985092 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2674 ABC-type histidine/lysine/arginine/ornithine transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 984397..985092 Tolumonas auensis DSM 9187 7884888 YP_002892116.1 CDS Tola_0902 NC_012691.1 985095 987119 D PFAM: transglutaminase domain protein; KEGG: vvy:VV1099 transglutaminase-like enzyme; transglutaminase domain-containing protein 985095..987119 Tolumonas auensis DSM 9187 7884889 YP_002892117.1 CDS Tola_0903 NC_012691.1 987112 987918 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sbp:Sbal223_1649 exodeoxyribonuclease III; exodeoxyribonuclease III complement(987112..987918) Tolumonas auensis DSM 9187 7884890 YP_002892118.1 CDS Tola_0904 NC_012691.1 988600 990084 R PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: aha:AHA_1048 thermostable carboxypeptidase 1; Carboxypeptidase Taq complement(988600..990084) Tolumonas auensis DSM 9187 7884893 YP_002892119.1 CDS Tola_0905 NC_012691.1 990215 991132 R PFAM: GumN family protein; KEGG: asa:ASA_3249 hypothetical protein; GumN family protein complement(990215..991132) Tolumonas auensis DSM 9187 7884894 YP_002892120.1 CDS Tola_0906 NC_012691.1 991144 991476 D PFAM: Domain of unknown function DUF1904; KEGG: vpa:VP0563 hypothetical protein; hypothetical protein 991144..991476 Tolumonas auensis DSM 9187 7884895 YP_002892121.1 CDS Tola_0907 NC_012691.1 991526 992353 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_3247 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(991526..992353) Tolumonas auensis DSM 9187 7884896 YP_002892122.1 CDS Tola_0908 NC_012691.1 992461 993870 R PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding LysM; MLTD_N domain protein; SMART: Peptidoglycan-binding LysM; KEGG: asa:ASA_2791 lytic murein transglycosylase; Lytic transglycosylase catalytic complement(992461..993870) Tolumonas auensis DSM 9187 7884897 YP_002892123.1 CDS Tola_0909 NC_012691.1 993954 994724 R KEGG: aha:AHA_1567 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(993954..994724) Tolumonas auensis DSM 9187 7884898 YP_002892124.1 CDS Tola_0910 NC_012691.1 994811 995566 D PFAM: Methyltransferase type 11; KEGG: aha:AHA_1569 methyltransferase; type 11 methyltransferase 994811..995566 Tolumonas auensis DSM 9187 7884899 YP_002892125.1 CDS rnhA NC_012691.1 995563 996027 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(995563..996027) Tolumonas auensis DSM 9187 7884900 YP_002892126.1 CDS Tola_0912 NC_012691.1 996077 996826 D KEGG: asa:ASA_2787 DNA polymerase III, epsilon chain; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 996077..996826 Tolumonas auensis DSM 9187 7884901 YP_002892127.1 CDS Tola_0913 NC_012691.1 996869 997447 D TIGRFAM: phosphoheptose isomerase; KEGG: aha:AHA_1574 phosphoheptose isomerase; phosphoheptose isomerase 996869..997447 Tolumonas auensis DSM 9187 7884902 YP_002892128.1 CDS Tola_0914 NC_012691.1 997466 998263 D PFAM: glutamine amidotransferase class-II; KEGG: asa:ASA_2782 glutamine amidotransferase; glutamine amidotransferase 997466..998263 Tolumonas auensis DSM 9187 7884903 YP_002892129.1 CDS Tola_0915 NC_012691.1 998280 998942 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: plu:plu2761 phosphoribosylglycinamide formyltransferase 1 (GarT) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase); phosphoribosylglycinamide formyltransferase complement(998280..998942) Tolumonas auensis DSM 9187 7884904 YP_002892130.1 CDS Tola_0916 NC_012691.1 998942 999979 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(998942..999979) Tolumonas auensis DSM 9187 7884905 YP_002892131.1 CDS upp NC_012691.1 1000148 1000774 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1000148..1000774 Tolumonas auensis DSM 9187 7884906 YP_002892132.1 CDS Tola_0918 NC_012691.1 1000910 1001614 D TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: asa:ASA_1513 DnaA-like protein Hda; DnaA regulatory inactivator Hda 1000910..1001614 Tolumonas auensis DSM 9187 7884907 YP_002892133.1 CDS Tola_0919 NC_012691.1 1001611 1003017 R PFAM: peptidase M48 Ste24p; KEGG: aha:AHA_1676 zinc metalloprotease; peptidase M48 Ste24p complement(1001611..1003017) Tolumonas auensis DSM 9187 7884908 YP_002892134.1 CDS Tola_0920 NC_012691.1 1003178 1004254 D PFAM: protein of unknown function UPF0118; KEGG: aha:AHA_1674 PerM family permease; hypothetical protein 1003178..1004254 Tolumonas auensis DSM 9187 7884909 YP_002892135.1 CDS Tola_0921 NC_012691.1 1004307 1005149 R PFAM: Thioredoxin domain; KEGG: aha:AHA_1312 thioredoxin domain-containing protein; thioredoxin domain-containing protein complement(1004307..1005149) Tolumonas auensis DSM 9187 7884910 YP_002892136.1 CDS Tola_0922 NC_012691.1 1005146 1005844 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: aha:AHA_1313 4'-phosphopantetheinyltransferase family protein; 4'-phosphopantetheinyl transferase complement(1005146..1005844) Tolumonas auensis DSM 9187 7884911 YP_002892137.1 CDS Tola_0923 NC_012691.1 1005894 1007774 R PFAM: sulfatase; KEGG: asa:ASA_2694 alkaline phosphatase superfamily hydrolase; sulfatase complement(1005894..1007774) Tolumonas auensis DSM 9187 7884912 YP_002892138.1 CDS Tola_0924 NC_012691.1 1007776 1008009 R PFAM: protein of unknown function DUF1414; KEGG: kpe:KPK_1537 hypothetical protein; hypothetical protein complement(1007776..1008009) Tolumonas auensis DSM 9187 7884913 YP_002892139.1 CDS Tola_0925 NC_012691.1 1008097 1009128 D PFAM: 37 kDa nucleoid-associated protein; KEGG: aha:AHA_1666 nucleoid-associated protein NdpA; 37 kDa nucleoid-associated protein 1008097..1009128 Tolumonas auensis DSM 9187 7884914 YP_002892140.1 CDS Tola_0926 NC_012691.1 1009132 1009719 R TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spe:Spro_3922 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(1009132..1009719) Tolumonas auensis DSM 9187 7884915 YP_002892141.1 CDS Tola_0927 NC_012691.1 1009918 1010244 R PFAM: protein of unknown function DUF710; KEGG: asa:ASA_2637 hypothetical protein; hypothetical protein complement(1009918..1010244) Tolumonas auensis DSM 9187 7884917 YP_002892142.1 CDS Tola_0928 NC_012691.1 1010368 1010979 D PFAM: protein of unknown function UPF0149; KEGG: aha:AHA_1715 YecA family protein; hypothetical protein 1010368..1010979 Tolumonas auensis DSM 9187 7884918 YP_002892143.1 CDS Tola_0929 NC_012691.1 1010991 1012181 D TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ppr:PBPRA3118 2-octaprenyl-6-methoxyphenyl hydroxylase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 1010991..1012181 Tolumonas auensis DSM 9187 7884919 YP_002892144.1 CDS Tola_0930 NC_012691.1 1012178 1013368 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: asa:ASA_2634 2-octaprenyl-6-methoxyphenol hydroxylase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 1012178..1013368 Tolumonas auensis DSM 9187 7884920 YP_002892145.1 CDS Tola_0931 NC_012691.1 1013399 1014226 R SMART: AAA ATPase; KEGG: aha:AHA_3504 DNA replication protein, putative; ATPase AAA complement(1013399..1014226) Tolumonas auensis DSM 9187 7884921 YP_002892146.1 CDS Tola_0932 NC_012691.1 1014219 1014896 R KEGG: aha:AHA_3503 hypothetical protein; hypothetical protein complement(1014219..1014896) Tolumonas auensis DSM 9187 7884922 YP_002892147.1 CDS Tola_0933 NC_012691.1 1015052 1016068 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: asa:ASA_0816 two-component system response regulator; response regulator receiver protein 1015052..1016068 Tolumonas auensis DSM 9187 7884923 YP_002892148.1 CDS Tola_0934 NC_012691.1 1016082 1016996 R KEGG: asa:ASA_0818 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(1016082..1016996) Tolumonas auensis DSM 9187 7884924 YP_002892149.1 CDS Tola_0935 NC_012691.1 1017087 1017479 R KEGG: aha:AHA_3498 ComEA protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; competence protein ComEA complement(1017087..1017479) Tolumonas auensis DSM 9187 7884925 YP_002892150.1 CDS Tola_0936 NC_012691.1 1017637 1018395 D TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: asa:ASA_0820 CysQ protein; 3'(2'),5'-bisphosphate nucleotidase 1017637..1018395 Tolumonas auensis DSM 9187 7884926 YP_002892151.1 CDS Tola_0937 NC_012691.1 1018444 1018740 R PFAM: YCII-related; KEGG: aha:AHA_3496 YciI-like protein; YCII-like protein complement(1018444..1018740) Tolumonas auensis DSM 9187 7884927 YP_002892152.1 CDS Tola_0938 NC_012691.1 1018743 1019291 R TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: eca:ECA2313 intracellular septation protein A; intracellular septation protein A complement(1018743..1019291) Tolumonas auensis DSM 9187 7884928 YP_002892153.1 CDS Tola_0939 NC_012691.1 1019402 1020208 R TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; KEGG: aha:AHA_2928 tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha complement(1019402..1020208) Tolumonas auensis DSM 9187 7884929 YP_002892154.1 CDS Tola_0940 NC_012691.1 1020205 1021398 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1020205..1021398) Tolumonas auensis DSM 9187 7884930 YP_002892155.1 CDS Tola_0941 NC_012691.1 1021438 1022820 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1021438..1022820) Tolumonas auensis DSM 9187 7884931 YP_002892156.1 CDS trpD NC_012691.1 1022825 1023835 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1022825..1023835) Tolumonas auensis DSM 9187 7884932 YP_002892157.1 CDS Tola_0943 NC_012691.1 1023838 1024437 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: asa:ASA_1406 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase complement(1023838..1024437) Tolumonas auensis DSM 9187 7884933 YP_002892158.1 CDS Tola_0944 NC_012691.1 1024430 1026058 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1024430..1026058) Tolumonas auensis DSM 9187 7884934 YP_002892159.1 CDS Tola_0945 NC_012691.1 1026437 1027300 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: asa:ASA_1409 PHP family metal-dependent phosphoesterase; PHP domain-containing protein 1026437..1027300 Tolumonas auensis DSM 9187 7884935 YP_002892160.1 CDS Tola_0946 NC_012691.1 1027297 1027917 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: aha:AHA_2920 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 1027297..1027917 Tolumonas auensis DSM 9187 7884936 YP_002892161.1 CDS Tola_0947 NC_012691.1 1027930 1028976 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: aha:AHA_2917 ribosomal large subunit pseudouridine synthase B; RNA-binding S4 domain-containing protein 1027930..1028976 Tolumonas auensis DSM 9187 7884937 YP_002892162.1 CDS Tola_0948 NC_012691.1 1028979 1029677 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: vsa:VSAL_I1965 hypothetical protein; exsB protein 1028979..1029677 Tolumonas auensis DSM 9187 7884938 YP_002892163.1 CDS Tola_0949 NC_012691.1 1029788 1030240 D KEGG: ilo:IL1271 signal protein; signal protein 1029788..1030240 Tolumonas auensis DSM 9187 7884939 YP_002892164.1 CDS Tola_0950 NC_012691.1 1030302 1031342 R KEGG: aha:AHA_0095 hypothetical protein; hypothetical protein complement(1030302..1031342) Tolumonas auensis DSM 9187 7884940 YP_002892165.1 CDS Tola_0951 NC_012691.1 1031558 1032937 D KEGG: esa:ESA_01915 hypothetical protein; hypothetical protein 1031558..1032937 Tolumonas auensis DSM 9187 7884941 YP_002892166.1 CDS Tola_0952 NC_012691.1 1033099 1033323 D hypothetical protein 1033099..1033323 Tolumonas auensis DSM 9187 7884942 YP_002892167.1 CDS Tola_0953 NC_012691.1 1033417 1034028 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: cvi:CV_2461 hypothetical protein; membrane-bound metal-dependent hydrolase 1033417..1034028 Tolumonas auensis DSM 9187 7884943 YP_002892168.1 CDS Tola_0954 NC_012691.1 1034356 1036662 D PFAM: Peptidase M11 gametolysin; KEGG: spl:Spea_1773 peptidase M11 gametolysin; Peptidase M11 gametolysin 1034356..1036662 Tolumonas auensis DSM 9187 7884944 YP_002892169.1 CDS Tola_0955 NC_012691.1 1036767 1038464 R KEGG: saz:Sama_1417 hypothetical protein; hypothetical protein complement(1036767..1038464) Tolumonas auensis DSM 9187 7884054 YP_002892170.1 CDS Tola_0956 NC_012691.1 1039054 1040415 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azo:azo3031 transcriptional regulatory protein; Fis family sigma-54 specific transcriptional regulator 1039054..1040415 Tolumonas auensis DSM 9187 7884055 YP_002892171.1 CDS Tola_0957 NC_012691.1 1040896 1041171 R PFAM: Fe(II) trafficking protein YggX; KEGG: asa:ASA_0512 hypothetical protein; hypothetical protein complement(1040896..1041171) Tolumonas auensis DSM 9187 7884059 YP_002892172.1 CDS Tola_0958 NC_012691.1 1041183 1042274 R KEGG: asa:ASA_0513 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(1041183..1042274) Tolumonas auensis DSM 9187 7884060 YP_002892173.1 CDS Tola_0959 NC_012691.1 1042410 1043135 D KEGG: aha:AHA_3482 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1042410..1043135 Tolumonas auensis DSM 9187 7884061 YP_002892174.1 CDS Tola_0960 NC_012691.1 1043203 1044348 R KEGG: asa:ASA_3447 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(1043203..1044348) Tolumonas auensis DSM 9187 7884062 YP_002892175.1 CDS Tola_0961 NC_012691.1 1044352 1044942 R TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: aha:AHA_0846 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase complement(1044352..1044942) Tolumonas auensis DSM 9187 7884063 YP_002892176.1 CDS Tola_0962 NC_012691.1 1045036 1045326 R PFAM: protein of unknown function DUF167; KEGG: vsp:VS_2686 hypothetical protein; hypothetical protein complement(1045036..1045326) Tolumonas auensis DSM 9187 7884064 YP_002892177.1 CDS Tola_0963 NC_012691.1 1045326 1045877 R PFAM: protein of unknown function YGGT; KEGG: aha:AHA_3662 integral membrane protein; hypothetical protein complement(1045326..1045877) Tolumonas auensis DSM 9187 7884065 YP_002892178.1 CDS Tola_0964 NC_012691.1 1045886 1046710 R KEGG: aha:AHA_3663 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; pyrroline-5-carboxylate reductase complement(1045886..1046710) Tolumonas auensis DSM 9187 7884066 YP_002892179.1 CDS Tola_0965 NC_012691.1 1046716 1047417 R PFAM: alanine racemase domain protein; KEGG: aha:AHA_3664 hypothetical protein; alanine racemase domain-containing protein complement(1046716..1047417) Tolumonas auensis DSM 9187 7884067 YP_002892180.1 CDS Tola_0966 NC_012691.1 1047451 1048488 D KEGG: asa:ASA_3632 type IV pilus protein TapT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 1047451..1048488 Tolumonas auensis DSM 9187 7884068 YP_002892181.1 CDS Tola_0967 NC_012691.1 1048499 1049605 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: asa:ASA_3633 type IV pilus protein TapU; twitching motility protein 1048499..1049605 Tolumonas auensis DSM 9187 7884069 YP_002892182.1 CDS Tola_0968 NC_012691.1 1049680 1050462 D PFAM: protein of unknown function DUF328; KEGG: ypb:YPTS_0629 hypothetical protein; hypothetical protein 1049680..1050462 Tolumonas auensis DSM 9187 7884070 YP_002892183.1 CDS Tola_0969 NC_012691.1 1050525 1051841 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: aha:AHA_3668 ATP-dependent RNA helicase SrmB; DEAD/DEAH box helicase complement(1050525..1051841) Tolumonas auensis DSM 9187 7884071 YP_002892184.1 CDS Tola_0970 NC_012691.1 1051863 1052660 D PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: aha:AHA_3669 SmtA protein; methyltransferase small 1051863..1052660 Tolumonas auensis DSM 9187 7884072 YP_002892185.1 CDS Tola_0971 NC_012691.1 1052668 1053186 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB complement(1052668..1053186) Tolumonas auensis DSM 9187 7884073 YP_002892186.1 CDS Tola_0972 NC_012691.1 1053265 1054158 D TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aha:AHA_3273 tyrosine recombinase XerD; tyrosine recombinase XerD 1053265..1054158 Tolumonas auensis DSM 9187 7884074 YP_002892187.1 CDS Tola_0973 NC_012691.1 1054193 1055815 D KEGG: bja:bll7080 hypothetical protein; hypothetical protein 1054193..1055815 Tolumonas auensis DSM 9187 7884075 YP_002892188.1 CDS Tola_0974 NC_012691.1 1055887 1057614 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: asa:ASA_1036 RecJ single-stranded-DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 1055887..1057614 Tolumonas auensis DSM 9187 7884076 YP_002892189.1 CDS prfB NC_012691.1 1057953 1059051 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 join(1057953..1058027,1058029..1059051) Tolumonas auensis DSM 9187 7884077 YP_002892190.1 CDS lysS NC_012691.1 1059069 1060610 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1059069..1060610 Tolumonas auensis DSM 9187 7884078 YP_002892191.1 CDS Tola_0977 NC_012691.1 1060670 1062262 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_2016 ABC transporter ATP-binding protein; ABC transporter 1060670..1062262 Tolumonas auensis DSM 9187 7884079 YP_002892192.1 CDS rimO NC_012691.1 1062465 1063793 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase complement(1062465..1063793) Tolumonas auensis DSM 9187 7884080 YP_002892193.1 CDS Tola_0979 NC_012691.1 1064173 1064580 R PFAM: DGC domain protein; KEGG: tmz:Tmz1t_0653 DGC domain protein; DGC domain-containing protein complement(1064173..1064580) Tolumonas auensis DSM 9187 7884081 YP_002892194.1 CDS Tola_0980 NC_012691.1 1064626 1065213 R KEGG: bsu:BSU05380 hypothetical protein; hypothetical protein complement(1064626..1065213) Tolumonas auensis DSM 9187 7884082 YP_002892195.1 CDS Tola_0981 NC_012691.1 1065315 1065737 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bvi:Bcep1808_5074 MarR family transcriptional regulator; transcriptional regulator, MarR family 1065315..1065737 Tolumonas auensis DSM 9187 7884083 YP_002892196.1 CDS Tola_0982 NC_012691.1 1065868 1066374 R PFAM: protein of unknown function DUF1543; KEGG: sgl:SG0708 hypothetical protein; hypothetical protein complement(1065868..1066374) Tolumonas auensis DSM 9187 7884084 YP_002892197.1 CDS Tola_0984 NC_012691.1 1067539 1068003 D PFAM: branched-chain amino acid transport; KEGG: vpa:VPA1004 putative transmembrane protein; branched-chain amino acid transport 1067539..1068003 Tolumonas auensis DSM 9187 7884086 YP_002892198.1 CDS Tola_0985 NC_012691.1 1068048 1068350 D KEGG: kpn:KPN_01716 putative dehydrogenase; hypothetical protein 1068048..1068350 Tolumonas auensis DSM 9187 7884087 YP_002892199.1 CDS Tola_0986 NC_012691.1 1068384 1069811 R PFAM: glycoside hydrolase family 1; KEGG: ypi:YpsIP31758_2729 6-phospho-beta-glucosidase BglA; glycoside hydrolase family 1 complement(1068384..1069811) Tolumonas auensis DSM 9187 7884088 YP_002892200.1 CDS Tola_0987 NC_012691.1 1069975 1070877 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpn:KPN_01303 transcriptional regulator LysR; LysR family transcriptional regulator 1069975..1070877 Tolumonas auensis DSM 9187 7884089 YP_002892201.1 CDS Tola_0988 NC_012691.1 1071211 1072017 D PFAM: dihydrodipicolinate reductase; KEGG: ppd:Ppro_3262 dihydrodipicolinate reductase; Dihydrodipicolinate reductase 1071211..1072017 Tolumonas auensis DSM 9187 7884090 YP_002892202.1 CDS Tola_0989 NC_012691.1 1072215 1073315 D TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_1601 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase family protein 1072215..1073315 Tolumonas auensis DSM 9187 7884091 YP_002892203.1 CDS Tola_0990 NC_012691.1 1073332 1073946 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: asa:ASA_2813 phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase complement(1073332..1073946) Tolumonas auensis DSM 9187 7884092 YP_002892204.1 CDS Tola_0991 NC_012691.1 1073939 1074583 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01214 putative ATP-binding component of a transport system; ABC transporter complement(1073939..1074583) Tolumonas auensis DSM 9187 7884093 YP_002892205.1 CDS Tola_0992 NC_012691.1 1074585 1076249 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecr:ECIAI1_1816 fused putative transporter subunits of ABC superfamily: membrane components; binding-protein-dependent transport system inner membrane protein complement(1074585..1076249) Tolumonas auensis DSM 9187 7884094 YP_002892206.1 CDS Tola_0993 NC_012691.1 1076222 1077397 R PFAM: extracellular solute-binding protein family 1; KEGG: cko:CKO_01779 hypothetical protein; putative ABC transporter solute-binding protein complement(1076222..1077397) Tolumonas auensis DSM 9187 7884095 YP_002892207.1 CDS Tola_0994 NC_012691.1 1077533 1079686 D PFAM: SNARE associated Golgi protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rfr:Rfer_1621 pyridine nucleotide-disulphide oxidoreductase dimerisation protein; hypothetical protein 1077533..1079686 Tolumonas auensis DSM 9187 7884096 YP_002892208.1 CDS Tola_0995 NC_012691.1 1079749 1081923 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: vch:VC1560 catalase/peroxidase; catalase/peroxidase HPI complement(1079749..1081923) Tolumonas auensis DSM 9187 7884097 YP_002892209.1 CDS Tola_0996 NC_012691.1 1082265 1083248 D TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: azo:azo3317 zinc-binding alcohol dehydrogenase; YhdH/YhfP family quinone oxidoreductase 1082265..1083248 Tolumonas auensis DSM 9187 7884098 YP_002892210.1 CDS Tola_0997 NC_012691.1 1083267 1083905 R PFAM: regulatory protein TetR; KEGG: eck:EC55989_4944 putative HTH regulator, TetR family; TetR family transcriptional regulator complement(1083267..1083905) Tolumonas auensis DSM 9187 7884099 YP_002892211.1 CDS Tola_0998 NC_012691.1 1084158 1084358 D KEGG: asa:ASA_3928 hypothetical protein; hypothetical protein 1084158..1084358 Tolumonas auensis DSM 9187 7884100 YP_002892212.1 CDS Tola_0999 NC_012691.1 1084448 1085506 R KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Methionine sulfoxide reductase A; methionine-R-sulfoxide reductase complement(1084448..1085506) Tolumonas auensis DSM 9187 7884101 YP_002892213.1 CDS Tola_1000 NC_012691.1 1085625 1086014 R PFAM: diacylglycerol kinase; KEGG: bcy:Bcer98_3028 diacylglycerol kinase; diacylglycerol kinase complement(1085625..1086014) Tolumonas auensis DSM 9187 7884102 YP_002892214.1 CDS Tola_1001 NC_012691.1 1086057 1087658 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pin:Ping_1883 phosphoesterase, PA-phosphatase related; PA-phosphatase like phosphoesterase complement(1086057..1087658) Tolumonas auensis DSM 9187 7884103 YP_002892215.1 CDS Tola_1002 NC_012691.1 1087655 1089106 R PFAM: permease; KEGG: tmz:Tmz1t_1855 permease; permease complement(1087655..1089106) Tolumonas auensis DSM 9187 7884104 YP_002892216.1 CDS Tola_1003 NC_012691.1 1089128 1089511 R KEGG: sat:SYN_00344 putative cytoplasmic protein; putative cytoplasmic protein complement(1089128..1089511) Tolumonas auensis DSM 9187 7884105 YP_002892217.1 CDS Tola_1004 NC_012691.1 1089588 1089827 R TIGRFAM: redox-active disulfide protein 2; KEGG: psa:PST_0232 thiol-disulfide isomerase and thioredoxins family protein; redox-active disulfide protein 2 complement(1089588..1089827) Tolumonas auensis DSM 9187 7884106 YP_002892218.1 CDS Tola_1005 NC_012691.1 1089853 1090896 R PFAM: permease; KEGG: pna:Pnap_2844 permease; permease complement(1089853..1090896) Tolumonas auensis DSM 9187 7884107 YP_002892219.1 CDS Tola_1006 NC_012691.1 1090986 1091534 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: tmz:Tmz1t_1854 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit complement(1090986..1091534) Tolumonas auensis DSM 9187 7884108 YP_002892220.1 CDS Tola_1007 NC_012691.1 1091562 1092635 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cvi:CV_2440 arsenic resistance membrane protein ArsB/ACR3; arsenical-resistance protein complement(1091562..1092635) Tolumonas auensis DSM 9187 7884109 YP_002892221.1 CDS Tola_1008 NC_012691.1 1092776 1093204 R PFAM: protein of unknown function DUF454; KEGG: psb:Psyr_3740 hypothetical protein; hypothetical protein complement(1092776..1093204) Tolumonas auensis DSM 9187 7884110 YP_002892222.1 CDS Tola_1009 NC_012691.1 1093552 1093755 D hypothetical protein 1093552..1093755 Tolumonas auensis DSM 9187 7884111 YP_002892223.1 CDS Tola_1010 NC_012691.1 1094175 1094372 D KEGG: aha:AHA_0414 hypothetical protein; hypothetical protein 1094175..1094372 Tolumonas auensis DSM 9187 7884112 YP_002892224.1 CDS Tola_1011 NC_012691.1 1094584 1095510 R phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase complement(1094584..1095510) Tolumonas auensis DSM 9187 7884113 YP_002892225.1 CDS Tola_1012 NC_012691.1 1096071 1097336 D PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_3428 extracellular solute-binding protein; extracellular solute-binding protein 1096071..1097336 Tolumonas auensis DSM 9187 7884114 YP_002892226.1 CDS Tola_1013 NC_012691.1 1097414 1098289 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120557 putative transmembrane permease transporter component; binding-protein-dependent transport system inner membrane protein 1097414..1098289 Tolumonas auensis DSM 9187 7884115 YP_002892227.1 CDS Tola_1014 NC_012691.1 1098298 1099209 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00049 sucrose ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1098298..1099209 Tolumonas auensis DSM 9187 7884116 YP_002892228.1 CDS Tola_1015 NC_012691.1 1099229 1100683 D PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase; Glycosyl hydrolase family 32 domain-containing protein 1099229..1100683 Tolumonas auensis DSM 9187 7884117 YP_002892229.1 CDS Tola_1016 NC_012691.1 1100695 1101822 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pin:Ping_2011 ABC transporter ATP-binding protein; ABC transporter 1100695..1101822 Tolumonas auensis DSM 9187 7884118 YP_002892230.1 CDS Tola_1017 NC_012691.1 1101919 1102935 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU10840 LacI family transcription regulator; transcriptional regulator, LacI family 1101919..1102935 Tolumonas auensis DSM 9187 7884119 YP_002892231.1 CDS Tola_1018 NC_012691.1 1102998 1103246 D hypothetical protein 1102998..1103246 Tolumonas auensis DSM 9187 7884120 YP_002892232.1 CDS Tola_1019 NC_012691.1 1103318 1104757 R KEGG: aha:AHA_1349 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(1103318..1104757) Tolumonas auensis DSM 9187 7884121 YP_002892233.1 CDS Tola_1020 NC_012691.1 1104952 1105803 R Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR complement(1104952..1105803) Tolumonas auensis DSM 9187 7884122 YP_002892234.1 CDS glk NC_012691.1 1106046 1107011 D catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 1106046..1107011 Tolumonas auensis DSM 9187 7884123 YP_002892235.1 CDS Tola_1022 NC_012691.1 1107085 1108815 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_2569 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1107085..1108815) Tolumonas auensis DSM 9187 7884124 YP_002892236.1 CDS Tola_1023 NC_012691.1 1109018 1109821 D PFAM: peptidase M48 Ste24p; KEGG: asa:ASA_1243 Zn-dependent protease with chaperone function; peptidase M48 Ste24p 1109018..1109821 Tolumonas auensis DSM 9187 7884125 YP_002892237.1 CDS Tola_1024 NC_012691.1 1109882 1110496 D PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: aha:AHA_1261 FKBP-type peptidyl-prolyl cis-trans isomerase FklB; FKBP-type peptidylprolyl isomerase 1109882..1110496 Tolumonas auensis DSM 9187 7884126 YP_002892238.1 CDS Tola_1025 NC_012691.1 1110591 1111403 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1110591..1111403 Tolumonas auensis DSM 9187 7884127 YP_002892239.1 CDS Tola_1026 NC_012691.1 1111806 1112936 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: asa:ASA_1648 carbamoylphosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 1111806..1112936 Tolumonas auensis DSM 9187 7884128 YP_002892240.1 CDS Tola_1027 NC_012691.1 1112955 1116182 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: aha:AHA_2723 carbamoyl phosphate synthase large subunit; carbamoyl-phosphate synthase large subunit 1112955..1116182 Tolumonas auensis DSM 9187 7884129 YP_002892241.1 CDS Tola_1028 NC_012691.1 1116247 1117110 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypg:YpAngola_A1768 threonine and homoserine efflux system; hypothetical protein 1116247..1117110 Tolumonas auensis DSM 9187 7884130 YP_002892242.1 CDS Tola_1029 NC_012691.1 1117152 1117736 R KEGG: azo:azo0662 hypothetical protein; hypothetical protein complement(1117152..1117736) Tolumonas auensis DSM 9187 7884131 YP_002892243.1 CDS Tola_1030 NC_012691.1 1117866 1118465 R PFAM: regulatory protein TetR; KEGG: vco:VC0395_A1019 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1117866..1118465) Tolumonas auensis DSM 9187 7884132 YP_002892244.1 CDS Tola_1031 NC_012691.1 1118566 1120017 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: vco:VC0395_A1020 putative multidrug resistance protein; NodT family RND efflux system outer membrane lipoprotein 1118566..1120017 Tolumonas auensis DSM 9187 7884133 YP_002892245.1 CDS Tola_1032 NC_012691.1 1120039 1121247 D PFAM: secretion protein HlyD family protein; KEGG: vch:VC1410 multidrug resistance protein VceA; secretion protein HlyD family protein 1120039..1121247 Tolumonas auensis DSM 9187 7884134 YP_002892246.1 CDS Tola_1033 NC_012691.1 1121258 1122796 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1411 multidrug resistance protein VceB; EmrB/QacA subfamily drug resistance transporter 1121258..1122796 Tolumonas auensis DSM 9187 7883575 YP_002892247.1 CDS Tola_1034 NC_012691.1 1123065 1123892 D PFAM: class II aldolase/adducin family protein; KEGG: esa:ESA_03850 rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase 1123065..1123892 Tolumonas auensis DSM 9187 7883576 YP_002892248.1 CDS Tola_1035 NC_012691.1 1123975 1126047 R KEGG: aha:AHA_2395 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(1123975..1126047) Tolumonas auensis DSM 9187 7883577 YP_002892249.1 CDS Tola_1036 NC_012691.1 1126188 1127594 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_1914 glucose-specific PTS system IIBC components; PTS system glucose-like transporter subunit IIB complement(1126188..1127594) Tolumonas auensis DSM 9187 7883578 YP_002892250.1 CDS Tola_1037 NC_012691.1 1127661 1129241 R PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein; alpha-L-rhamnosidase complement(1127661..1129241) Tolumonas auensis DSM 9187 7883579 YP_002892251.1 CDS Tola_1038 NC_012691.1 1129306 1130706 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_2465 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(1129306..1130706) Tolumonas auensis DSM 9187 7883580 YP_002892252.1 CDS Tola_1039 NC_012691.1 1130917 1131750 R PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: kpe:KPK_2467 putative HTH-type transcriptional activator RhaS; AraC family transcriptional regulator complement(1130917..1131750) Tolumonas auensis DSM 9187 7883581 YP_002892253.1 CDS Tola_1040 NC_012691.1 1131964 1132278 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: sdy:SDY_3845 hypothetical protein; L-rhamnose 1-epimerase complement(1131964..1132278) Tolumonas auensis DSM 9187 7883582 YP_002892254.1 CDS Tola_1041 NC_012691.1 1132294 1133328 R transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter complement(1132294..1133328) Tolumonas auensis DSM 9187 7883583 YP_002892255.1 CDS Tola_1042 NC_012691.1 1133541 1134800 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(1133541..1134800) Tolumonas auensis DSM 9187 7883584 YP_002892256.1 CDS Tola_1043 NC_012691.1 1134797 1136287 R TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase FGGY; KEGG: eca:ECA0440 rhamnulokinase; rhamnulokinase complement(1134797..1136287) Tolumonas auensis DSM 9187 7883585 YP_002892257.1 CDS Tola_1044 NC_012691.1 1136588 1137415 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sbc:SbBS512_E4384 HTH-type transcriptional activator RhaS; AraC family transcriptional regulator 1136588..1137415 Tolumonas auensis DSM 9187 7883586 YP_002892258.1 CDS Tola_1045 NC_012691.1 1137520 1138671 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ypb:YPTS_0405 lactaldehyde reductase; iron-containing alcohol dehydrogenase 1137520..1138671 Tolumonas auensis DSM 9187 7883587 YP_002892259.1 CDS Tola_1046 NC_012691.1 1138882 1139073 R hypothetical protein complement(1138882..1139073) Tolumonas auensis DSM 9187 7883588 YP_002892260.1 CDS Tola_1047 NC_012691.1 1139304 1141694 R KEGG: psa:PST_1240 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La complement(1139304..1141694) Tolumonas auensis DSM 9187 7883589 YP_002892261.1 CDS Tola_1048 NC_012691.1 1141897 1143414 R PFAM: SpoVR family protein; KEGG: aha:AHA_2442 hypothetical protein; SpoVR family protein complement(1141897..1143414) Tolumonas auensis DSM 9187 7883590 YP_002892262.1 CDS Tola_1049 NC_012691.1 1143426 1144694 R PFAM: protein of unknown function DUF444; KEGG: aha:AHA_2441 hypothetical protein; hypothetical protein complement(1143426..1144694) Tolumonas auensis DSM 9187 7883591 YP_002892263.1 CDS Tola_1050 NC_012691.1 1144715 1146640 R PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: aha:AHA_2440 PrkA serine kinase; putative serine protein kinase PrkA complement(1144715..1146640) Tolumonas auensis DSM 9187 7883592 YP_002892264.1 CDS Tola_1051 NC_012691.1 1146849 1146989 D hypothetical protein 1146849..1146989 Tolumonas auensis DSM 9187 7883593 YP_002892265.1 CDS Tola_1052 NC_012691.1 1147011 1149479 R KEGG: asa:ASA_2289 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(1147011..1149479) Tolumonas auensis DSM 9187 7883594 YP_002892266.1 CDS Tola_1053 NC_012691.1 1149793 1150515 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1149793..1150515) Tolumonas auensis DSM 9187 7883595 YP_002892267.1 CDS Tola_1054 NC_012691.1 1150721 1151971 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: mmw:Mmwyl1_0198 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 1150721..1151971 Tolumonas auensis DSM 9187 7883596 YP_002892268.1 CDS Tola_1055 NC_012691.1 1152093 1152506 R hypothetical protein complement(1152093..1152506) Tolumonas auensis DSM 9187 7883597 YP_002892269.1 CDS Tola_1056 NC_012691.1 1152532 1152741 R hypothetical protein complement(1152532..1152741) Tolumonas auensis DSM 9187 7883598 YP_002892270.1 CDS Tola_1057 NC_012691.1 1152823 1153092 R hypothetical protein complement(1152823..1153092) Tolumonas auensis DSM 9187 7883599 YP_002892271.1 CDS Tola_1058 NC_012691.1 1153221 1154240 D KEGG: son:SO_4578 transposase, putative; transposase 1153221..1154240 Tolumonas auensis DSM 9187 7883600 YP_002892272.1 CDS Tola_1059 NC_012691.1 1154258 1154767 R hypothetical protein complement(1154258..1154767) Tolumonas auensis DSM 9187 7883601 YP_002892273.1 CDS Tola_1060 NC_012691.1 1154853 1155665 R PFAM: Integrase catalytic region; KEGG: vsp:VS_1873 transposase (orfB) of insertion sequence ISVisp1 ; IS3 family subgroup IS3; integrase catalytic subunit complement(1154853..1155665) Tolumonas auensis DSM 9187 7883602 YP_002892274.1 CDS Tola_1061 NC_012691.1 1155689 1156033 R PFAM: transposase IS3/IS911 family protein; KEGG: abo:ABO_1787 transposase, OrfA; transposase IS3/IS911 family protein complement(1155689..1156033) Tolumonas auensis DSM 9187 7883603 YP_002892275.1 CDS Tola_1062 NC_012691.1 1156121 1156936 R KEGG: psb:Psyr_4839 hypothetical protein; hypothetical protein complement(1156121..1156936) Tolumonas auensis DSM 9187 7883604 YP_002892276.1 CDS Tola_1063 NC_012691.1 1156945 1157151 R hypothetical protein complement(1156945..1157151) Tolumonas auensis DSM 9187 7883605 YP_002892277.1 CDS Tola_1064 NC_012691.1 1157501 1157629 R hypothetical protein complement(1157501..1157629) Tolumonas auensis DSM 9187 7883606 YP_002892278.1 CDS Tola_1065 NC_012691.1 1157678 1158361 R manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase complement(1157678..1158361) Tolumonas auensis DSM 9187 7883607 YP_002892279.1 CDS Tola_1066 NC_012691.1 1158575 1159084 R hypothetical protein complement(1158575..1159084) Tolumonas auensis DSM 9187 7883608 YP_002892280.1 CDS Tola_1068 NC_012691.1 1159413 1159922 R PFAM: Lipocalin family protein; KEGG: dol:Dole_1202 lipocalin family protein; lipocalin family protein complement(1159413..1159922) Tolumonas auensis DSM 9187 7883610 YP_002892281.1 CDS Tola_1069 NC_012691.1 1160006 1160530 R hypothetical protein complement(1160006..1160530) Tolumonas auensis DSM 9187 7883611 YP_002892282.1 CDS Tola_1070 NC_012691.1 1160762 1161136 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: saz:Sama_1110 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1160762..1161136) Tolumonas auensis DSM 9187 7883612 YP_002892283.1 CDS Tola_1071 NC_012691.1 1161276 1163294 D SMART: helicase c2; KEGG: aha:AHA_2199 ATP-dependent helicase DinG; helicase c2 1161276..1163294 Tolumonas auensis DSM 9187 7883613 YP_002892284.1 CDS Tola_1072 NC_012691.1 1163275 1163982 D PFAM: peptidase M22 glycoprotease; KEGG: aha:AHA_2201 glycoprotease family protein; peptidase M22 glycoprotease 1163275..1163982 Tolumonas auensis DSM 9187 7883614 YP_002892285.1 CDS Tola_1073 NC_012691.1 1164015 1164527 D PFAM: outer membrane lipoprotein Slp; KEGG: asa:ASA_2097 starvation-inducible outer membrane lipoprotein; outer membrane lipoprotein Slp 1164015..1164527 Tolumonas auensis DSM 9187 7883615 YP_002892286.1 CDS Tola_1074 NC_012691.1 1164820 1166667 D TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: vpa:VP3027 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 1164820..1166667 Tolumonas auensis DSM 9187 7883616 YP_002892287.1 CDS Tola_1075 NC_012691.1 1166667 1167323 D catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 1166667..1167323 Tolumonas auensis DSM 9187 7883617 YP_002892288.1 CDS Tola_1076 NC_012691.1 1167316 1168110 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: yen:YE0291 thiamine biosynthesis protein; UBA/THIF-type NAD/FAD binding protein 1167316..1168110 Tolumonas auensis DSM 9187 7883618 YP_002892289.1 CDS Tola_1077 NC_012691.1 1168095 1168295 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: spq:SPAB_05151 sulfur carrier protein ThiS; thiamine biosynthesis protein ThiS 1168095..1168295 Tolumonas auensis DSM 9187 7883619 YP_002892290.1 CDS Tola_1078 NC_012691.1 1168298 1169077 D PFAM: thiazole biosynthesis family protein; KEGG: aha:AHA_0443 thiazole synthase; thiazole biosynthesis family protein 1168298..1169077 Tolumonas auensis DSM 9187 7883620 YP_002892291.1 CDS Tola_1079 NC_012691.1 1169074 1170216 D TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: ppr:PBPRA0110 thiamine biosynthesis protein ThiH; thiazole biosynthesis protein ThiH 1169074..1170216 Tolumonas auensis DSM 9187 7883621 YP_002892292.1 CDS Tola_1080 NC_012691.1 1170453 1170833 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: vsa:VSAL_II0312 hypothetical protein, putative anti-sigma factor antagonist; anti-sigma-factor antagonist 1170453..1170833 Tolumonas auensis DSM 9187 7883622 YP_002892293.1 CDS Tola_1081 NC_012691.1 1170907 1171644 D KEGG: cvi:CV_3586 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase 1170907..1171644 Tolumonas auensis DSM 9187 7883623 YP_002892294.1 CDS tig NC_012691.1 1171829 1173139 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1171829..1173139 Tolumonas auensis DSM 9187 7883624 YP_002892295.1 CDS Tola_1083 NC_012691.1 1173225 1173848 D KEGG: asa:ASA_1889 ATP-dependent Clp protease, proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 1173225..1173848 Tolumonas auensis DSM 9187 7883625 YP_002892296.1 CDS clpX NC_012691.1 1173924 1175204 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1173924..1175204 Tolumonas auensis DSM 9187 7883626 YP_002892297.1 CDS Tola_1085 NC_012691.1 1175344 1177692 D KEGG: aha:AHA_2013 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 1175344..1177692 Tolumonas auensis DSM 9187 7883627 YP_002892298.1 CDS Tola_1086 NC_012691.1 1177832 1178104 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: asa:ASA_1892 nucleoid DNA-binding protein HU-beta; histone family protein DNA-binding protein 1177832..1178104 Tolumonas auensis DSM 9187 7883628 YP_002892299.1 CDS Tola_1087 NC_012691.1 1178235 1180151 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: asa:ASA_1893 peptidyl-prolyl cis-trans isomerase D; PpiC-type peptidyl-prolyl cis-trans isomerase 1178235..1180151 Tolumonas auensis DSM 9187 7883629 YP_002892300.1 CDS Tola_1088 NC_012691.1 1180367 1180909 D affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 1180367..1180909 Tolumonas auensis DSM 9187 7883630 YP_002892301.1 CDS Tola_1089 NC_012691.1 1180921 1182930 D Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 1180921..1182930 Tolumonas auensis DSM 9187 7883631 YP_002892302.1 CDS Tola_1090 NC_012691.1 1183065 1184249 D KEGG: sse:Ssed_0973 phosphoribosylglycinamide formyltransferase 2; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; phosphoribosylglycinamide formyltransferase 2 1183065..1184249 Tolumonas auensis DSM 9187 7883632 YP_002892303.1 CDS Tola_1091 NC_012691.1 1184265 1184744 D KEGG: vvu:VV2_1209 methylated DNA-protein cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 1184265..1184744 Tolumonas auensis DSM 9187 7883633 YP_002892304.1 CDS asnC NC_012691.1 1184826 1186226 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1184826..1186226) Tolumonas auensis DSM 9187 7883634 YP_002892305.1 CDS Tola_1093 NC_012691.1 1186409 1187155 R PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: asa:ASA_2879 methyl-accepting chemotaxis protein; putative sensor complement(1186409..1187155) Tolumonas auensis DSM 9187 7883635 YP_002892306.1 CDS Tola_1094 NC_012691.1 1187353 1188687 R PFAM: glycoside hydrolase family 4; KEGG: vsa:VSAL_II1024 putative 6-phospho-beta-glucosidase; glycoside hydrolase family protein complement(1187353..1188687) Tolumonas auensis DSM 9187 7883636 YP_002892307.1 CDS Tola_1095 NC_012691.1 1188806 1189825 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vsa:VSAL_II1025 HTH-type transcriptional regulator, LysR family; LysR family transcriptional regulator 1188806..1189825 Tolumonas auensis DSM 9187 7883637 YP_002892308.1 CDS Tola_1096 NC_012691.1 1189763 1191046 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aha:AHA_1488 adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1189763..1191046) Tolumonas auensis DSM 9187 7883638 YP_002892309.1 CDS Tola_1097 NC_012691.1 1191148 1192215 D KEGG: aha:AHA_1489 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1191148..1192215 Tolumonas auensis DSM 9187 7883639 YP_002892310.1 CDS Tola_1098 NC_012691.1 1192205 1193356 D KEGG: asa:ASA_2876 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; aminotransferase class V; 8-amino-7-oxononanoate synthase 1192205..1193356 Tolumonas auensis DSM 9187 7883640 YP_002892311.1 CDS Tola_1099 NC_012691.1 1193349 1194122 D TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aha:AHA_1491 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 1193349..1194122 Tolumonas auensis DSM 9187 7883641 YP_002892312.1 CDS Tola_1100 NC_012691.1 1194119 1194802 D KEGG: aha:AHA_1492 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 1194119..1194802 Tolumonas auensis DSM 9187 7883642 YP_002892313.1 CDS Tola_1101 NC_012691.1 1194960 1195835 D putative metalloprotease; heat shock protein HtpX 1194960..1195835 Tolumonas auensis DSM 9187 7883643 YP_002892314.1 CDS Tola_1102 NC_012691.1 1195905 1196558 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: ppr:PBPRB0898 putative 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1195905..1196558) Tolumonas auensis DSM 9187 7883644 YP_002892315.1 CDS Tola_1103 NC_012691.1 1196943 1198682 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aha:AHA_1553 OMP85 family outer membrane protein; surface antigen (D15) 1196943..1198682 Tolumonas auensis DSM 9187 7883645 YP_002892316.1 CDS Tola_1104 NC_012691.1 1198679 1202401 D PFAM: protein of unknown function DUF490; KEGG: aha:AHA_1554 hypothetical protein; hypothetical protein 1198679..1202401 Tolumonas auensis DSM 9187 7883646 YP_002892317.1 CDS Tola_1105 NC_012691.1 1202504 1204213 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sfr:Sfri_0585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1202504..1204213 Tolumonas auensis DSM 9187 7883647 YP_002892318.1 CDS Tola_1106 NC_012691.1 1204281 1205558 R KEGG: mmw:Mmwyl1_0047 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase complement(1204281..1205558) Tolumonas auensis DSM 9187 7883648 YP_002892319.1 CDS Tola_1107 NC_012691.1 1205599 1207062 R KEGG: mmw:Mmwyl1_0048 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase complement(1205599..1207062) Tolumonas auensis DSM 9187 7883649 YP_002892320.1 CDS Tola_1108 NC_012691.1 1207181 1208107 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mmw:Mmwyl1_0035 LysR family transcriptional regulator; LysR family transcriptional regulator 1207181..1208107 Tolumonas auensis DSM 9187 7883650 YP_002892321.1 CDS Tola_1109 NC_012691.1 1208180 1209004 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pag:PLES_06031 putative permease of ABC transporter; binding-protein-dependent transport system inner membrane protein complement(1208180..1209004) Tolumonas auensis DSM 9187 7883651 YP_002892322.1 CDS Tola_1110 NC_012691.1 1209023 1210282 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_4001 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1209023..1210282) Tolumonas auensis DSM 9187 7883652 YP_002892323.1 CDS Tola_1111 NC_012691.1 1210386 1211420 R PFAM: extracellular solute-binding protein family 1; KEGG: pap:PSPA7_0748 putative binding protein component of ABC transporter; extracellular solute-binding protein complement(1210386..1211420) Tolumonas auensis DSM 9187 7883653 YP_002892324.1 CDS Tola_1112 NC_012691.1 1211454 1212548 R KEGG: pag:PLES_06001 putative ATP-binding component of ABC transporter; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(1211454..1212548) Tolumonas auensis DSM 9187 7883654 YP_002892325.1 CDS Tola_1113 NC_012691.1 1213093 1214046 D PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: aha:AHA_1099 hypothetical protein; hypothetical protein 1213093..1214046 Tolumonas auensis DSM 9187 7883655 YP_002892326.1 CDS Tola_1114 NC_012691.1 1214057 1215454 D PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: aha:AHA_1101 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 1214057..1215454 Tolumonas auensis DSM 9187 7886162 YP_002892327.1 CDS Tola_1115 NC_012691.1 1216552 1218561 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1216552..1218561 Tolumonas auensis DSM 9187 7886167 YP_002892328.1 CDS Tola_1116 NC_012691.1 1218598 1219248 R KEGG: vfm:VFMJ11_1717 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; GTP cyclohydrolase I complement(1218598..1219248) Tolumonas auensis DSM 9187 7886168 YP_002892329.1 CDS Tola_1117 NC_012691.1 1219796 1221316 R PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: asa:ASA_2405 exodeoxyribonuclease I; Exodeoxyribonuclease I complement(1219796..1221316) Tolumonas auensis DSM 9187 7886169 YP_002892330.1 CDS Tola_1118 NC_012691.1 1221544 1221942 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ppw:PputW619_3143 protein of unknown function DUF395 YeeE/YedE; hypothetical protein 1221544..1221942 Tolumonas auensis DSM 9187 7886170 YP_002892331.1 CDS Tola_1119 NC_012691.1 1221953 1222402 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pin:Ping_3633 hypothetical protein; hypothetical protein 1221953..1222402 Tolumonas auensis DSM 9187 7886171 YP_002892332.1 CDS Tola_1120 NC_012691.1 1222453 1222953 R PFAM: YfbU family protein; KEGG: aha:AHA_0893 hypothetical protein; hypothetical protein complement(1222453..1222953) Tolumonas auensis DSM 9187 7886172 YP_002892333.1 CDS Tola_1121 NC_012691.1 1223170 1223721 D KEGG: aha:AHA_1219 hypothetical protein; hypothetical protein 1223170..1223721 Tolumonas auensis DSM 9187 7886173 YP_002892334.1 CDS Tola_1122 NC_012691.1 1223729 1224721 D PFAM: glycosyl transferase family 2; KEGG: aha:AHA_1218 bactoprenol glucosyl transferase; family 2 glycosyl transferase 1223729..1224721 Tolumonas auensis DSM 9187 7886174 YP_002892335.1 CDS Tola_1123 NC_012691.1 1224718 1225089 D PFAM: GtrA family protein; KEGG: asa:ASA_1209 hypothetical protein; GtrA family protein 1224718..1225089 Tolumonas auensis DSM 9187 7886175 YP_002892336.1 CDS Tola_1124 NC_012691.1 1225108 1226289 D KEGG: asa:ASA_1208 hypothetical protein; hypothetical protein 1225108..1226289 Tolumonas auensis DSM 9187 7886176 YP_002892337.1 CDS Tola_1125 NC_012691.1 1226342 1226809 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_2480 thioredoxin-dependent thiol peroxidase; alkyl hydroperoxide reductase complement(1226342..1226809) Tolumonas auensis DSM 9187 7886177 YP_002892338.1 CDS Tola_1126 NC_012691.1 1226974 1227852 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: aha:AHA_0896 dihydrodipicolinate synthase; dihydrodipicolinate synthase 1226974..1227852 Tolumonas auensis DSM 9187 7886178 YP_002892339.1 CDS Tola_1127 NC_012691.1 1227854 1229377 D PFAM: NlpBDapX family lipoprotein; KEGG: aha:AHA_0897 NlpB/DapX lipoprotein; NlpBDapX family lipoprotein 1227854..1229377 Tolumonas auensis DSM 9187 7886179 YP_002892340.1 CDS Tola_1128 NC_012691.1 1229467 1229622 R KEGG: asa:ASA_2889 hypothetical protein; hypothetical protein complement(1229467..1229622) Tolumonas auensis DSM 9187 7886180 YP_002892341.1 CDS Tola_1129 NC_012691.1 1229619 1230305 R PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: eca:ECA1290 putative D-alanyl-D-alanine carboxypeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin complement(1229619..1230305) Tolumonas auensis DSM 9187 7886181 YP_002892342.1 CDS Tola_1130 NC_012691.1 1230298 1231440 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1230298..1231440) Tolumonas auensis DSM 9187 7886182 YP_002892343.1 CDS Tola_1131 NC_012691.1 1231466 1231813 R PFAM: arsenate reductase and related; KEGG: vha:VIBHAR_03182 hypothetical protein; arsenate reductase-like protein complement(1231466..1231813) Tolumonas auensis DSM 9187 7886183 YP_002892344.1 CDS Tola_1132 NC_012691.1 1231817 1232062 R KEGG: esa:ESA_01570 hypothetical protein; hypothetical protein complement(1231817..1232062) Tolumonas auensis DSM 9187 7886184 YP_002892345.1 CDS Tola_1133 NC_012691.1 1232143 1233168 R PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: aha:AHA_1280 major outer membrane protein OmpAII; OmpA domain-containing protein transmembrane region-containing protein complement(1232143..1233168) Tolumonas auensis DSM 9187 7886185 YP_002892346.1 CDS Tola_1134 NC_012691.1 1233392 1233493 R hypothetical protein complement(1233392..1233493) Tolumonas auensis DSM 9187 7886186 YP_002892347.1 CDS Tola_1135 NC_012691.1 1233494 1233763 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: asa:ASA_1269 transcriptional protein; XRE family transcriptional regulator 1233494..1233763 Tolumonas auensis DSM 9187 7886187 YP_002892348.1 CDS Tola_1136 NC_012691.1 1233855 1234829 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vvy:VV1318 transcriptional regulator CysB; LysR family transcriptional regulator 1233855..1234829 Tolumonas auensis DSM 9187 7886188 YP_002892349.1 CDS Tola_1137 NC_012691.1 1234886 1236118 R PFAM: iron-containing alcohol dehydrogenase; KEGG: ypb:YPTS_3527 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1234886..1236118) Tolumonas auensis DSM 9187 7886189 YP_002892350.1 CDS Tola_1138 NC_012691.1 1236966 1237919 D TIGRFAM: phage/plasmid-related protein TIGR03299; KEGG: aha:AHA_1087 hypothetical protein; phage/plasmid-related protein 1236966..1237919 Tolumonas auensis DSM 9187 7886191 YP_002892351.1 CDS Tola_1139 NC_012691.1 1237997 1238977 D TIGRFAM: phage-type endonuclease; KEGG: aha:AHA_1086 hypothetical protein; phage-type endonuclease 1237997..1238977 Tolumonas auensis DSM 9187 7886192 YP_002892352.1 CDS Tola_1140 NC_012691.1 1238974 1239903 D KEGG: aha:AHA_1085 hypothetical protein; hypothetical protein 1238974..1239903 Tolumonas auensis DSM 9187 7886193 YP_002892353.1 CDS Tola_1141 NC_012691.1 1239975 1240625 D KEGG: bxe:Bxe_B0479 hypothetical protein; hypothetical protein 1239975..1240625 Tolumonas auensis DSM 9187 7886194 YP_002892354.1 CDS Tola_1142 NC_012691.1 1240622 1241119 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: pmr:PMI2440 plasmid-related DNA repair protein; DNA repair protein RadC 1240622..1241119 Tolumonas auensis DSM 9187 7886195 YP_002892355.1 CDS Tola_1144 NC_012691.1 1241350 1241976 R KEGG: aav:Aave_4114 hypothetical protein; hypothetical protein complement(1241350..1241976) Tolumonas auensis DSM 9187 7886197 YP_002892356.1 CDS Tola_1146 NC_012691.1 1243358 1243708 D hypothetical protein 1243358..1243708 Tolumonas auensis DSM 9187 7886199 YP_002892357.1 CDS Tola_1147 NC_012691.1 1244414 1245760 D KEGG: sbn:Sbal195_0447 hypothetical protein; hypothetical protein 1244414..1245760 Tolumonas auensis DSM 9187 7886200 YP_002892358.1 CDS Tola_1148 NC_012691.1 1245757 1247088 D PFAM: glycosyl transferase family 2; KEGG: asa:ASA_0610 glycosyl transferase family protein; family 2 glycosyl transferase 1245757..1247088 Tolumonas auensis DSM 9187 7886201 YP_002892359.1 CDS Tola_1149 NC_012691.1 1247090 1248163 D KEGG: asa:ASA_0611 hypothetical protein; hypothetical protein 1247090..1248163 Tolumonas auensis DSM 9187 7886202 YP_002892360.1 CDS Tola_1150 NC_012691.1 1248213 1248977 D KEGG: cvi:CV_0096 hypothetical protein; hypothetical protein 1248213..1248977 Tolumonas auensis DSM 9187 7886203 YP_002892361.1 CDS Tola_1153 NC_012691.1 1249557 1250177 D hypothetical protein 1249557..1250177 Tolumonas auensis DSM 9187 7886206 YP_002892362.1 CDS Tola_1154 NC_012691.1 1250385 1250759 D hypothetical protein 1250385..1250759 Tolumonas auensis DSM 9187 7886207 YP_002892363.1 CDS Tola_1155 NC_012691.1 1251404 1254775 D PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase domain protein; SMART: DEAD-like helicase; KEGG: abo:ABO_1832 type I restriction-modification system, R subunit; type III restriction protein res subunit 1251404..1254775 Tolumonas auensis DSM 9187 7886208 YP_002892364.1 CDS Tola_1156 NC_012691.1 1254862 1256403 D PFAM: N-6 DNA methylase; KEGG: abo:ABO_1830 type I restriction-modification system, M subunit; N-6 DNA methylase 1254862..1256403 Tolumonas auensis DSM 9187 7886209 YP_002892365.1 CDS Tola_1157 NC_012691.1 1256400 1257515 D PFAM: restriction modification system DNA specificity domain; KEGG: hsm:HSM_0486 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein 1256400..1257515 Tolumonas auensis DSM 9187 7886210 YP_002892366.1 CDS Tola_1158 NC_012691.1 1257539 1259002 D KEGG: mmr:Mmar10_0165 hypothetical protein; hypothetical protein 1257539..1259002 Tolumonas auensis DSM 9187 7886211 YP_002892367.1 CDS Tola_1159 NC_012691.1 1259002 1259886 D hypothetical protein 1259002..1259886 Tolumonas auensis DSM 9187 7886212 YP_002892368.1 CDS Tola_1160 NC_012691.1 1259936 1260661 R KEGG: tmz:Tmz1t_0025 hypothetical protein; hypothetical protein complement(1259936..1260661) Tolumonas auensis DSM 9187 7886213 YP_002892369.1 CDS Tola_1161 NC_012691.1 1260802 1261590 D hypothetical protein 1260802..1261590 Tolumonas auensis DSM 9187 7886214 YP_002892370.1 CDS Tola_1162 NC_012691.1 1261616 1262389 D KEGG: azo:azo2309 hypothetical protein; hypothetical protein 1261616..1262389 Tolumonas auensis DSM 9187 7886215 YP_002892371.1 CDS Tola_1163 NC_012691.1 1262431 1262751 D KEGG: hypothetical protein; hypothetical protein 1262431..1262751 Tolumonas auensis DSM 9187 7886216 YP_002892372.1 CDS Tola_1164 NC_012691.1 1262805 1263971 D TIGRFAM: CRISPR-associated protein, NE0113 family; KEGG: vsp:VS_1375 hypothetical protein; CRISPR-associated protein, NE0113 family 1262805..1263971 Tolumonas auensis DSM 9187 7886217 YP_002892373.1 CDS Tola_1165 NC_012691.1 1264086 1264700 D hypothetical protein 1264086..1264700 Tolumonas auensis DSM 9187 7886218 YP_002892374.1 CDS Tola_1166 NC_012691.1 1265386 1267884 D PFAM: GTP-binding protein HSR1-related; KEGG: ilo:IL0534 membrane associated GTPase; GTP-binding protein HSR1-related 1265386..1267884 Tolumonas auensis DSM 9187 7886219 YP_002892375.1 CDS Tola_1167 NC_012691.1 1267887 1269554 D PFAM: GTP-binding protein HSR1-related; KEGG: ilo:IL0535 GTPase domain-containing protein; GTP-binding protein HSR1-related 1267887..1269554 Tolumonas auensis DSM 9187 7886220 YP_002892376.1 CDS Tola_1169 NC_012691.1 1270242 1270910 R KEGG: vvy:VV0801 hypothetical protein; hypothetical protein complement(1270242..1270910) Tolumonas auensis DSM 9187 7886222 YP_002892377.1 CDS Tola_1170 NC_012691.1 1271066 1272502 R KEGG: ecd:ECDH10B_2791 CP4-57 prophage; hypothetical protein; CP4-57 prophage protein complement(1271066..1272502) Tolumonas auensis DSM 9187 7886223 YP_002892378.1 CDS Tola_1171 NC_012691.1 1272518 1272754 R hypothetical protein complement(1272518..1272754) Tolumonas auensis DSM 9187 7886224 YP_002892379.1 CDS Tola_1172 NC_012691.1 1272751 1273173 R hypothetical protein complement(1272751..1273173) Tolumonas auensis DSM 9187 7886225 YP_002892380.1 CDS Tola_1173 NC_012691.1 1273411 1274715 R PFAM: integrase family protein; KEGG: ecd:ECDH10B_0269 CP4-6 prophage; phage integrase; integrase family protein complement(1273411..1274715) Tolumonas auensis DSM 9187 7886226 YP_002892381.1 CDS Tola_1174 NC_012691.1 1275475 1276257 D PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: ecf:ECH74115_3389 transcriptional regulator, IclR family, C-terminal domain; transcriptional regulator, IclR family 1275475..1276257 Tolumonas auensis DSM 9187 7886227 YP_002892382.1 CDS Tola_1175 NC_012691.1 1276277 1277482 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sbo:SBO_2047 putative racemase; mandelate racemase/muconate lactonizing protein 1276277..1277482 Tolumonas auensis DSM 9187 7886228 YP_002892383.1 CDS Tola_1176 NC_012691.1 1277555 1278844 D PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM2290 putative transport protein; major facilitator superfamily protein 1277555..1278844 Tolumonas auensis DSM 9187 7886229 YP_002892384.1 CDS Tola_1177 NC_012691.1 1278865 1279671 D PFAM: HpcH/HpaI aldolase; KEGG: kpn:KPN_02650 putative aldolase; putative aldolase 1278865..1279671 Tolumonas auensis DSM 9187 7886230 YP_002892385.1 CDS Tola_1178 NC_012691.1 1279868 1281019 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ypb:YPTS_0405 lactaldehyde reductase; iron-containing alcohol dehydrogenase 1279868..1281019 Tolumonas auensis DSM 9187 7886231 YP_002892386.1 CDS Tola_1179 NC_012691.1 1281363 1281602 D KEGG: noc:Noc_3027 hypothetical protein; hypothetical protein 1281363..1281602 Tolumonas auensis DSM 9187 7886232 YP_002892387.1 CDS Tola_1180 NC_012691.1 1281644 1284061 D TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: sbm:Shew185_2193 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 1281644..1284061 Tolumonas auensis DSM 9187 7886233 YP_002892388.1 CDS Tola_1181 NC_012691.1 1284058 1285104 D PFAM: protein of unknown function DUF1016; KEGG: mmw:Mmwyl1_3201 hypothetical protein; hypothetical protein 1284058..1285104 Tolumonas auensis DSM 9187 7886234 YP_002892389.1 CDS Tola_1182 NC_012691.1 1285104 1286441 D PFAM: restriction modification system DNA specificity domain; KEGG: kpe:KPK_4975 type I restriction modification DNA specificity domain protein; restriction modification system DNA specificity domain-containing protein 1285104..1286441 Tolumonas auensis DSM 9187 7886235 YP_002892390.1 CDS Tola_1183 NC_012691.1 1286434 1287843 D PFAM: protein of unknown function DUF262; KEGG: pcr:Pcryo_0950 hypothetical protein; hypothetical protein 1286434..1287843 Tolumonas auensis DSM 9187 7886236 YP_002892391.1 CDS Tola_1184 NC_012691.1 1287836 1289815 D PFAM: protein of unknown function DUF262; KEGG: ppr:PBPRA1799 hypothetical protein; hypothetical protein 1287836..1289815 Tolumonas auensis DSM 9187 7886237 YP_002892392.1 CDS Tola_1185 NC_012691.1 1289820 1292912 D KEGG: kpe:KPK_4972 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; HsdR family type I site-specific deoxyribonuclease 1289820..1292912 Tolumonas auensis DSM 9187 7886238 YP_002892393.1 CDS Tola_1186 NC_012691.1 1292912 1293628 D PFAM: protein of unknown function DUF45; KEGG: ecg:E2348C_1090 hypothetical protein; hypothetical protein 1292912..1293628 Tolumonas auensis DSM 9187 7886239 YP_002892394.1 CDS Tola_1187 NC_012691.1 1293903 1296944 D PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: ecw:EcE24377A_0290 UvrD family helicase; UvrD/REP helicase 1293903..1296944 Tolumonas auensis DSM 9187 7886240 YP_002892395.1 CDS Tola_1188 NC_012691.1 1297376 1298494 R KEGG: hypothetical protein; hypothetical protein complement(1297376..1298494) Tolumonas auensis DSM 9187 7886241 YP_002892396.1 CDS Tola_1190 NC_012691.1 1298768 1299751 D PFAM: filamentation induced by cAMP protein Fic; KEGG: ppd:Ppro_1856 fis family transcriptional regulator; filamentation induced by cAMP protein fic 1298768..1299751 Tolumonas auensis DSM 9187 7883973 YP_002892397.1 CDS Tola_1191 NC_012691.1 1300146 1301366 R KEGG: aeh:Mlg_1802 GAF sensor signal transduction histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase complement(1300146..1301366) Tolumonas auensis DSM 9187 7883974 YP_002892398.1 CDS Tola_1192 NC_012691.1 1301872 1303572 D KEGG: ypb:YPTS_3031 potassium-transporting ATPase, A subunit; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1301872..1303572 Tolumonas auensis DSM 9187 7883975 YP_002892399.1 CDS Tola_1193 NC_012691.1 1303585 1305651 D TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ypy:YPK_1158 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 1303585..1305651 Tolumonas auensis DSM 9187 7883976 YP_002892400.1 CDS Tola_1194 NC_012691.1 1305653 1306225 D KEGG: spe:Spro_1246 potassium-transporting ATPase subunit C; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase, C subunit 1305653..1306225 Tolumonas auensis DSM 9187 7883977 YP_002892401.1 CDS Tola_1195 NC_012691.1 1306212 1308905 D sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 1306212..1308905 Tolumonas auensis DSM 9187 7883978 YP_002892402.1 CDS Tola_1196 NC_012691.1 1308898 1309593 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA1338 DNA-binding transcriptional activator KdpE; two component transcriptional regulator, winged helix family 1308898..1309593 Tolumonas auensis DSM 9187 7883979 YP_002892403.1 CDS Tola_1199 NC_012691.1 1310471 1311337 R PFAM: TOBE domain protein; regulatory protein LysR; KEGG: dar:Daro_1477 molybdenum-binding protein, N-terminal:molybdenum-pterin binding protein; ModE family transcriptional regulator complement(1310471..1311337) Tolumonas auensis DSM 9187 7883982 YP_002892404.1 CDS Tola_1200 NC_012691.1 1311751 1312506 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ppw:PputW619_3197 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 1311751..1312506 Tolumonas auensis DSM 9187 7883983 YP_002892405.1 CDS Tola_1201 NC_012691.1 1312601 1313029 D PFAM: TOBE domain protein; KEGG: pfl:PFL_3618 molybdenum-pterin-binding protein; TOBE domain-containing protein 1312601..1313029 Tolumonas auensis DSM 9187 7883984 YP_002892406.1 CDS Tola_1202 NC_012691.1 1313264 1314358 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: afr:AFE_1527 Nif-specific regulatory protein; Fis family sigma-54 specific transcriptional regulator 1313264..1314358 Tolumonas auensis DSM 9187 7883985 YP_002892407.1 CDS Tola_1203 NC_012691.1 1314636 1315160 D PFAM: Disulphide bond formation protein DsbB; KEGG: asa:ASA_2303 disulfide bond formation protein; Disulfide bond formation protein DsbB 1314636..1315160 Tolumonas auensis DSM 9187 7883986 YP_002892408.1 CDS Tola_1204 NC_012691.1 1315268 1315549 D PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; hypothetical protein 1315268..1315549 Tolumonas auensis DSM 9187 7883987 YP_002892409.1 CDS Tola_1205 NC_012691.1 1315584 1316006 D PFAM: ferric-uptake regulator; KEGG: son:SO_1937 ferric uptake regulator; ferric uptake regulator, Fur family 1315584..1316006 Tolumonas auensis DSM 9187 7883988 YP_002892410.1 CDS Tola_1206 NC_012691.1 1316344 1316883 D KEGG: sfr:Sfri_1975 hypothetical protein; hypothetical protein 1316344..1316883 Tolumonas auensis DSM 9187 7883989 YP_002892411.1 CDS Tola_1207 NC_012691.1 1316986 1317429 D PFAM: thioesterase superfamily protein; KEGG: sbn:Sbal195_1431 thioesterase superfamily protein; thioesterase superfamily protein 1316986..1317429 Tolumonas auensis DSM 9187 7883990 YP_002892412.1 CDS Tola_1208 NC_012691.1 1317413 1318261 D PFAM: beta-lactamase domain protein; KEGG: dps:DP2748 hypothetical protein; beta-lactamase domain-containing protein 1317413..1318261 Tolumonas auensis DSM 9187 7883991 YP_002892413.1 CDS Tola_1209 NC_012691.1 1318264 1319688 D PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tgr:Tgr7_0145 dihydrolipoamide dehydrogenase; pyridine nucleotide-disulfide oxidoreductase dimerisation region 1318264..1319688 Tolumonas auensis DSM 9187 7883992 YP_002892414.1 CDS Tola_1210 NC_012691.1 1319720 1320229 R PFAM: TOBE domain protein; KEGG: azo:azo3845 putative molybdenum ABC transporter permease protein; TOBE domain-containing protein complement(1319720..1320229) Tolumonas auensis DSM 9187 7883993 YP_002892415.1 CDS Tola_1211 NC_012691.1 1320226 1320942 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: azo:azo3846 putative molybdate transport system substrate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(1320226..1320942) Tolumonas auensis DSM 9187 7883994 YP_002892416.1 CDS Tola_1212 NC_012691.1 1321300 1322133 D TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: pna:Pnap_2039 ModD protein; modD protein 1321300..1322133 Tolumonas auensis DSM 9187 7883995 YP_002892417.1 CDS Tola_1213 NC_012691.1 1322291 1322629 D SMART: Rhodanese domain protein; KEGG: apa:APP7_1335 hypothetical protein; rhodanese domain-containing protein 1322291..1322629 Tolumonas auensis DSM 9187 7883996 YP_002892418.1 CDS Tola_1214 NC_012691.1 1322851 1323807 D PFAM: Integral membrane protein TerC; KEGG: asa:ASA_1703 transport protein Alx; integral membrane protein TerC 1322851..1323807 Tolumonas auensis DSM 9187 7883997 YP_002892419.1 CDS Tola_1215 NC_012691.1 1323800 1324153 R KEGG: aeh:Mlg_1775 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1323800..1324153) Tolumonas auensis DSM 9187 7883998 YP_002892420.1 CDS Tola_1216 NC_012691.1 1324436 1325491 D KEGG: Zxdb; zinc finger, X-linked, duplicated B; hypothetical protein 1324436..1325491 Tolumonas auensis DSM 9187 7883999 YP_002892421.1 CDS Tola_1217 NC_012691.1 1325581 1325910 R TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: spl:Spea_2107 DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein complement(1325581..1325910) Tolumonas auensis DSM 9187 7884000 YP_002892422.1 CDS Tola_1218 NC_012691.1 1325911 1328085 R TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical protein; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: asa:ASA_2526 hypothetical protein; YccS/YhfK family integral membrane protein complement(1325911..1328085) Tolumonas auensis DSM 9187 7884001 YP_002892423.1 CDS Tola_1220 NC_012691.1 1328652 1330355 D PFAM: N-6 DNA methylase; KEGG: shn:Shewana3_4240 N-6 DNA methylase; adenine-specific DNA-methyltransferase 1328652..1330355 Tolumonas auensis DSM 9187 7884004 YP_002892424.1 CDS Tola_1221 NC_012691.1 1330345 1331658 D PFAM: restriction modification system DNA specificity domain; KEGG: neu:NE0384 restriction modification system, type I; restriction modification system DNA specificity domain-containing protein 1330345..1331658 Tolumonas auensis DSM 9187 7884005 YP_002892425.1 CDS Tola_1222 NC_012691.1 1331658 1332587 D PFAM: protein of unknown function DUF511; KEGG: prw:PsycPRwf_0030 hypothetical protein; hypothetical protein 1331658..1332587 Tolumonas auensis DSM 9187 7884006 YP_002892426.1 CDS Tola_1223 NC_012691.1 1332604 1335828 D KEGG: sbp:Sbal223_4470 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; HsdR family type I site-specific deoxyribonuclease 1332604..1335828 Tolumonas auensis DSM 9187 7884007 YP_002892427.1 CDS Tola_1224 NC_012691.1 1336490 1336762 D hypothetical protein 1336490..1336762 Tolumonas auensis DSM 9187 7884008 YP_002892428.1 CDS Tola_1225 NC_012691.1 1336907 1337755 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hsm:HSM_0184 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1336907..1337755) Tolumonas auensis DSM 9187 7884009 YP_002892429.1 CDS Tola_1226 NC_012691.1 1337766 1337876 R hypothetical protein complement(1337766..1337876) Tolumonas auensis DSM 9187 7884010 YP_002892430.1 CDS Tola_1227 NC_012691.1 1337982 1338617 D TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: asa:ASA_2521 pseudouridine synthase RluA-like protein; pseudouridine synthase Rlu family protein 1337982..1338617 Tolumonas auensis DSM 9187 7884011 YP_002892431.1 CDS Tola_1228 NC_012691.1 1338920 1339948 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_05807 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein 1338920..1339948 Tolumonas auensis DSM 9187 7884012 YP_002892432.1 CDS Tola_1229 NC_012691.1 1340017 1341210 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfm:VFMJ11_1627 general L-amino acid transport system permease protein AapQ; polar amino acid ABC transporter inner membrane subunit 1340017..1341210 Tolumonas auensis DSM 9187 7884013 YP_002892433.1 CDS Tola_1230 NC_012691.1 1341212 1342309 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_1401 ABC transporter: transmembrane protein; polar amino acid ABC transporter inner membrane subunit 1341212..1342309 Tolumonas auensis DSM 9187 7884014 YP_002892434.1 CDS Tola_1231 NC_012691.1 1342320 1343072 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_05810 ABC-type polar amino acid transport system, ATPase component; ABC transporter 1342320..1343072 Tolumonas auensis DSM 9187 7884015 YP_002892435.1 CDS Tola_1232 NC_012691.1 1343130 1344806 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2381 alpha-D-1,4-glucosidase; alpha amylase complement(1343130..1344806) Tolumonas auensis DSM 9187 7884016 YP_002892436.1 CDS Tola_1233 NC_012691.1 1344832 1346499 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2383 dextran glucosidase; alpha amylase complement(1344832..1346499) Tolumonas auensis DSM 9187 7884017 YP_002892437.1 CDS Tola_1234 NC_012691.1 1346565 1347680 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: spe:Spro_2522 ABC transporter-related protein; ABC transporter complement(1346565..1347680) Tolumonas auensis DSM 9187 7884018 YP_002892438.1 CDS Tola_1235 NC_012691.1 1347776 1348621 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2524 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1347776..1348621) Tolumonas auensis DSM 9187 7884019 YP_002892439.1 CDS Tola_1236 NC_012691.1 1348621 1349622 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2525 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1348621..1349622) Tolumonas auensis DSM 9187 7884020 YP_002892440.1 CDS Tola_1237 NC_012691.1 1349694 1350962 R PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2526 extracellular solute-binding protein; extracellular solute-binding protein complement(1349694..1350962) Tolumonas auensis DSM 9187 7884021 YP_002892441.1 CDS Tola_1238 NC_012691.1 1351142 1352068 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2527 LysR family transcriptional regulator; LysR family transcriptional regulator 1351142..1352068 Tolumonas auensis DSM 9187 7884022 YP_002892442.1 CDS Tola_1239 NC_012691.1 1352118 1352450 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0914 PTS system, sucrose-specific IIBC subunit; PTS system glucose-like transporter subunit IIB complement(1352118..1352450) Tolumonas auensis DSM 9187 7884023 YP_002892443.1 CDS Tola_1240 NC_012691.1 1352769 1354463 D KEGG: asa:ASA_2557 hypothetical protein; hypothetical protein 1352769..1354463 Tolumonas auensis DSM 9187 7884024 YP_002892444.1 CDS Tola_1241 NC_012691.1 1354460 1355221 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pzu:PHZ_c2816 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1354460..1355221 Tolumonas auensis DSM 9187 7884025 YP_002892445.1 CDS Tola_1242 NC_012691.1 1355289 1355654 R KEGG: ppr:PBPRB0316 hypothetical protein; hypothetical protein complement(1355289..1355654) Tolumonas auensis DSM 9187 7884026 YP_002892446.1 CDS Tola_1243 NC_012691.1 1355959 1357248 R KEGG: glo:Glov_1799 hypothetical protein; hypothetical protein complement(1355959..1357248) Tolumonas auensis DSM 9187 7884028 YP_002892447.1 CDS Tola_1244 NC_012691.1 1357245 1357982 R KEGG: glo:Glov_1800 hypothetical protein; hypothetical protein complement(1357245..1357982) Tolumonas auensis DSM 9187 7884029 YP_002892448.1 CDS Tola_1245 NC_012691.1 1357996 1359240 R PFAM: protein of unknown function DUF214; KEGG: glo:Glov_1801 protein of unknown function DUF214; hypothetical protein complement(1357996..1359240) Tolumonas auensis DSM 9187 7884030 YP_002892449.1 CDS Tola_1246 NC_012691.1 1359237 1359926 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1802 ABC transporter related; ABC transporter complement(1359237..1359926) Tolumonas auensis DSM 9187 7884031 YP_002892450.1 CDS Tola_1247 NC_012691.1 1360180 1361286 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(1360180..1361286) Tolumonas auensis DSM 9187 7884032 YP_002892451.1 CDS Tola_1248 NC_012691.1 1361385 1361825 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1361385..1361825) Tolumonas auensis DSM 9187 7884033 YP_002892452.1 CDS Tola_1249 NC_012691.1 1361822 1362379 R PFAM: protein of unknown function DUF179; KEGG: sse:Ssed_1237 hypothetical protein; hypothetical protein complement(1361822..1362379) Tolumonas auensis DSM 9187 7884034 YP_002892453.1 CDS Tola_1250 NC_012691.1 1362396 1363352 R KEGG: asa:ASA_1197 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein; glutathione synthetase complement(1362396..1363352) Tolumonas auensis DSM 9187 7884035 YP_002892454.1 CDS Tola_1251 NC_012691.1 1363361 1364092 R PFAM: protein of unknown function DUF558; KEGG: aha:AHA_3127 hypothetical protein; hypothetical protein complement(1363361..1364092) Tolumonas auensis DSM 9187 7884036 YP_002892455.1 CDS Tola_1252 NC_012691.1 1364093 1364692 R PFAM: Endonuclease I; KEGG: esa:ESA_00397 hypothetical protein; Deoxyribonuclease I complement(1364093..1364692) Tolumonas auensis DSM 9187 7884037 YP_002892456.1 CDS Tola_1253 NC_012691.1 1364897 1365727 D KEGG: apj:APJL_1392 hypothetical protein; hypothetical protein 1364897..1365727 Tolumonas auensis DSM 9187 7884038 YP_002892457.1 CDS Tola_1254 NC_012691.1 1365678 1366202 R PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: vsa:VSAL_I0551 putative metallopeptidase, SprT family; hypothetical protein complement(1365678..1366202) Tolumonas auensis DSM 9187 7884039 YP_002892458.1 CDS Tola_1255 NC_012691.1 1366280 1367434 R KEGG: asa:ASA_1201 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(1366280..1367434) Tolumonas auensis DSM 9187 7884040 YP_002892459.1 CDS Tola_1256 NC_012691.1 1367709 1369709 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1367709..1369709 Tolumonas auensis DSM 9187 7884041 YP_002892460.1 CDS pgk NC_012691.1 1370017 1371180 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1370017..1371180 Tolumonas auensis DSM 9187 7884042 YP_002892461.1 CDS Tola_1258 NC_012691.1 1371294 1372370 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 1371294..1372370 Tolumonas auensis DSM 9187 7884043 YP_002892462.1 CDS Tola_1259 NC_012691.1 1372575 1374719 D KEGG: asa:ASA_1669 toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; type I secretion system ATPase 1372575..1374719 Tolumonas auensis DSM 9187 7884044 YP_002892463.1 CDS Tola_1260 NC_012691.1 1374712 1376097 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: asa:ASA_1670 HlyD family secretion protein; HlyD family type I secretion membrane fusion protein 1374712..1376097 Tolumonas auensis DSM 9187 7884045 YP_002892464.1 CDS Tola_1261 NC_012691.1 1376119 1377420 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: aha:AHA_2699 agglutination protein; TolC family type I secretion outer membrane protein 1376119..1377420 Tolumonas auensis DSM 9187 7884046 YP_002892465.1 CDS Tola_1262 NC_012691.1 1377431 1378156 D KEGG: asa:ASA_1672 periplasmic protein; hypothetical protein 1377431..1378156 Tolumonas auensis DSM 9187 7884047 YP_002892466.1 CDS Tola_1263 NC_012691.1 1378159 1380081 D KEGG: asa:ASA_1673 GGDEF/EAL protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 1378159..1380081 Tolumonas auensis DSM 9187 7884048 YP_002892467.1 CDS Tola_1264 NC_012691.1 1380281 1384666 D PFAM: Hemolysin-type calcium-binding region; KEGG: cja:CJA_1396 putative hemolysin; hemolysin-type calcium-binding protein 1380281..1384666 Tolumonas auensis DSM 9187 7884049 YP_002892468.1 CDS Tola_1265 NC_012691.1 1384727 1385341 D KEGG: asa:ASA_1676 hypothetical protein; hypothetical protein 1384727..1385341 Tolumonas auensis DSM 9187 7884050 YP_002892469.1 CDS Tola_1266 NC_012691.1 1385525 1389049 D KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein; putative outer membrane adhesin like protein 1385525..1389049 Tolumonas auensis DSM 9187 7884051 YP_002892470.1 CDS Tola_1267 NC_012691.1 1389015 1393121 D PFAM: Hemolysin-type calcium-binding region; KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein; hemolysin-type calcium-binding protein 1389015..1393121 Tolumonas auensis DSM 9187 7884052 YP_002892471.1 CDS Tola_1268 NC_012691.1 1393260 1393853 R KEGG: aha:AHA_1807 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II complement(1393260..1393853) Tolumonas auensis DSM 9187 7884053 YP_002892472.1 CDS Tola_1269 NC_012691.1 1394048 1394362 D KEGG: aha:AHA_1264 hypothetical protein; hypothetical protein 1394048..1394362 Tolumonas auensis DSM 9187 7885027 YP_002892473.1 CDS Tola_1270 NC_012691.1 1394359 1394580 R KEGG: eta:ETA_29440 conserved hypothetical protein YtfK; hypothetical protein complement(1394359..1394580) Tolumonas auensis DSM 9187 7885028 YP_002892474.1 CDS Tola_1271 NC_012691.1 1394828 1396303 D PFAM: phosphate transporter; KEGG: bbr:BB1395 phosphate transporter; phosphate transporter 1394828..1396303 Tolumonas auensis DSM 9187 7885029 YP_002892475.1 CDS Tola_1272 NC_012691.1 1396356 1396835 R PFAM: GCN5-related N-acetyltransferase; KEGG: swp:swp_4214 GCN5-like N-acetyltransferase; N-acetyltransferase GCN5 complement(1396356..1396835) Tolumonas auensis DSM 9187 7885030 YP_002892476.1 CDS Tola_1273 NC_012691.1 1396902 1397393 D PFAM: NUDIX hydrolase; KEGG: aha:AHA_1266 NUDIX hydrolase 3; NUDIX hydrolase 1396902..1397393 Tolumonas auensis DSM 9187 7885031 YP_002892477.1 CDS Tola_1274 NC_012691.1 1397432 1399333 R PFAM: sulfatase; KEGG: gme:Gmet_0526 sulfatase; sulfatase complement(1397432..1399333) Tolumonas auensis DSM 9187 7885032 YP_002892478.1 CDS Tola_1275 NC_012691.1 1399522 1402059 D PFAM: ATP-binding region ATPase domain protein; Cache domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rsq:Rsph17025_3226 bacterioferritin; Cache sensor hybrid histidine kinase 1399522..1402059 Tolumonas auensis DSM 9187 7885033 YP_002892479.1 CDS Tola_1276 NC_012691.1 1402215 1406096 D involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 1402215..1406096 Tolumonas auensis DSM 9187 7885034 YP_002892480.1 CDS Tola_1277 NC_012691.1 1406189 1408114 R KEGG: sse:Ssed_3804 hypothetical protein; hypothetical protein complement(1406189..1408114) Tolumonas auensis DSM 9187 7885035 YP_002892481.1 CDS Tola_1278 NC_012691.1 1408362 1408568 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: asa:ASA_0864 cold shock protein; cold-shock DNA-binding domain-containing protein 1408362..1408568 Tolumonas auensis DSM 9187 7885036 YP_002892482.1 CDS Tola_1279 NC_012691.1 1408653 1410377 R PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aha:AHA_2425 drug efflux ABC transporter ATP-binding and permease subunits; ABC transporter complement(1408653..1410377) Tolumonas auensis DSM 9187 7885037 YP_002892483.1 CDS Tola_1280 NC_012691.1 1410370 1412130 R PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aha:AHA_2427 ABC transporter, ATP-binding protein; ABC transporter complement(1410370..1412130) Tolumonas auensis DSM 9187 7885038 YP_002892484.1 CDS mepA NC_012691.1 1412127 1412924 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(1412127..1412924) Tolumonas auensis DSM 9187 7885039 YP_002892485.1 CDS Tola_1282 NC_012691.1 1412948 1413919 R PFAM: oxidoreductase domain protein; KEGG: lch:Lcho_3206 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein complement(1412948..1413919) Tolumonas auensis DSM 9187 7885040 YP_002892486.1 CDS Tola_1283 NC_012691.1 1414018 1414461 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: cvi:CV_1360 large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 1414018..1414461 Tolumonas auensis DSM 9187 7885041 YP_002892487.1 CDS Tola_1284 NC_012691.1 1414466 1414954 R KEGG: asa:ASA_1833 hypothetical protein; hypothetical protein complement(1414466..1414954) Tolumonas auensis DSM 9187 7885042 YP_002892488.1 CDS Tola_1285 NC_012691.1 1415038 1415367 R PFAM: Thioredoxin domain; KEGG: cti:RALTA_B1171 putative thiol-disulfide isomerase/thioredoxin; thioredoxin domain-containing protein complement(1415038..1415367) Tolumonas auensis DSM 9187 7885043 YP_002892489.1 CDS Tola_1286 NC_012691.1 1415413 1417296 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(1415413..1417296) Tolumonas auensis DSM 9187 7885044 YP_002892490.1 CDS Tola_1287 NC_012691.1 1417482 1417757 D PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: shw:Sputw3181_2537 glutaredoxin; glutaredoxin 1417482..1417757 Tolumonas auensis DSM 9187 7885045 YP_002892491.1 CDS Tola_1288 NC_012691.1 1418026 1419345 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: spe:Spro_0457 hypothetical protein; hypothetical protein 1418026..1419345 Tolumonas auensis DSM 9187 7885046 YP_002892492.1 CDS Tola_1289 NC_012691.1 1419491 1419985 D hypothetical protein 1419491..1419985 Tolumonas auensis DSM 9187 7885047 YP_002892493.1 CDS Tola_1290 NC_012691.1 1420144 1420620 D hypothetical protein 1420144..1420620 Tolumonas auensis DSM 9187 7885048 YP_002892494.1 CDS Tola_1291 NC_012691.1 1420812 1421453 D KEGG: gme:Gmet_1098 hypothetical protein; hypothetical protein 1420812..1421453 Tolumonas auensis DSM 9187 7885049 YP_002892495.1 CDS Tola_1292 NC_012691.1 1421464 1421874 R PFAM: Class I peptide chain release factor; KEGG: pap:PSPA7_4649 hypothetical protein; class I peptide chain release factor complement(1421464..1421874) Tolumonas auensis DSM 9187 7885050 YP_002892496.1 CDS Tola_1293 NC_012691.1 1421927 1422415 R PFAM: protein of unknown function DUF88; KEGG: mmw:Mmwyl1_0893 hypothetical protein; hypothetical protein complement(1421927..1422415) Tolumonas auensis DSM 9187 7885051 YP_002892497.1 CDS Tola_1294 NC_012691.1 1422450 1424042 R in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen complement(1422450..1424042) Tolumonas auensis DSM 9187 7885052 YP_002892498.1 CDS Tola_1295 NC_012691.1 1424039 1424386 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: neu:NE0878 hypothetical protein; cupin complement(1424039..1424386) Tolumonas auensis DSM 9187 7885053 YP_002892499.1 CDS Tola_1296 NC_012691.1 1424420 1425076 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: asa:ASA_0806 amino acid efflux LysE family protein; lysine exporter protein LysE/YggA complement(1424420..1425076) Tolumonas auensis DSM 9187 7885054 YP_002892500.1 CDS Tola_1297 NC_012691.1 1425090 1425284 R KEGG: reh:H16_A1348 hypothetical membrane associated protein; hypothetical protein complement(1425090..1425284) Tolumonas auensis DSM 9187 7885055 YP_002892501.1 CDS Tola_1298 NC_012691.1 1425492 1426121 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: psb:Psyr_0050 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA complement(1425492..1426121) Tolumonas auensis DSM 9187 7885056 YP_002892502.1 CDS Tola_1299 NC_012691.1 1426245 1426697 R PFAM: GCN5-related N-acetyltransferase; KEGG: pin:Ping_0252 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1426245..1426697) Tolumonas auensis DSM 9187 7885057 YP_002892503.1 CDS Tola_1300 NC_012691.1 1426764 1427714 R PFAM: pseudouridine synthase; KEGG: psb:Psyr_2133 pseudouridine synthase; pseudouridine synthase complement(1426764..1427714) Tolumonas auensis DSM 9187 7885058 YP_002892504.1 CDS Tola_1301 NC_012691.1 1427862 1428212 R KEGG: pnu:Pnuc_0567 hypothetical protein; hypothetical protein complement(1427862..1428212) Tolumonas auensis DSM 9187 7885059 YP_002892505.1 CDS Tola_1302 NC_012691.1 1428243 1428665 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azo:azo3718 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1428243..1428665) Tolumonas auensis DSM 9187 7885060 YP_002892506.1 CDS Tola_1303 NC_012691.1 1428716 1429660 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2538 hypothetical protein; hypothetical protein complement(1428716..1429660) Tolumonas auensis DSM 9187 7885061 YP_002892507.1 CDS Tola_1304 NC_012691.1 1429750 1430247 R PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_0919 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1429750..1430247) Tolumonas auensis DSM 9187 7885062 YP_002892508.1 CDS Tola_1305 NC_012691.1 1430247 1430543 R PFAM: Protein of unknown function DUF1778; KEGG: tgr:Tgr7_0918 protein of unknown function DUF1778; hypothetical protein complement(1430247..1430543) Tolumonas auensis DSM 9187 7885063 YP_002892509.1 CDS Tola_1306 NC_012691.1 1430654 1431058 R PFAM: NUDIX hydrolase; KEGG: shn:Shewana3_0463 NUDIX hydrolase; NUDIX hydrolase complement(1430654..1431058) Tolumonas auensis DSM 9187 7885064 YP_002892510.1 CDS Tola_1307 NC_012691.1 1431161 1432000 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: vfm:VFMJ11_1469 3-mercaptopyruvate sulfurtransferase; rhodanese domain-containing protein complement(1431161..1432000) Tolumonas auensis DSM 9187 7885065 YP_002892511.1 CDS Tola_1308 NC_012691.1 1432110 1432406 R PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: vsp:VS_1265 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein complement(1432110..1432406) Tolumonas auensis DSM 9187 7885066 YP_002892512.1 CDS Tola_1309 NC_012691.1 1432435 1433232 R PFAM: FRG domain protein; KEGG: sus:Acid_0172 hypothetical protein; FRG domain-containing protein complement(1432435..1433232) Tolumonas auensis DSM 9187 7885067 YP_002892513.1 CDS Tola_1310 NC_012691.1 1433229 1434056 R hypothetical protein complement(1433229..1434056) Tolumonas auensis DSM 9187 7885068 YP_002892514.1 CDS Tola_1311 NC_012691.1 1434163 1434882 R PFAM: protein of unknown function DUF88; KEGG: sfr:Sfri_3658 protein of unknown function DUF88; hypothetical protein complement(1434163..1434882) Tolumonas auensis DSM 9187 7885069 YP_002892515.1 CDS Tola_1312 NC_012691.1 1434953 1435753 R hypothetical protein complement(1434953..1435753) Tolumonas auensis DSM 9187 7885070 YP_002892516.1 CDS Tola_1313 NC_012691.1 1436110 1436937 R KEGG: asa:ASA_2174 hypothetical protein; hypothetical protein complement(1436110..1436937) Tolumonas auensis DSM 9187 7885071 YP_002892517.1 CDS Tola_1314 NC_012691.1 1437195 1438826 D KEGG: eca:ECA3270 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1437195..1438826 Tolumonas auensis DSM 9187 7885072 YP_002892518.1 CDS Tola_1315 NC_012691.1 1438862 1439410 D PFAM: YaeQ family protein; KEGG: esa:ESA_03147 hypothetical protein; YaeQ family protein 1438862..1439410 Tolumonas auensis DSM 9187 7885073 YP_002892519.1 CDS Tola_1316 NC_012691.1 1439430 1440419 R PFAM: oxidoreductase domain protein; KEGG: bsu:BSU31170 hypothetical protein; oxidoreductase domain-containing protein complement(1439430..1440419) Tolumonas auensis DSM 9187 7885074 YP_002892520.1 CDS Tola_1317 NC_012691.1 1440567 1442822 D PFAM: AsmA family protein; KEGG: bpt:Bpet3977 putative secreted protein; AsmA family protein 1440567..1442822 Tolumonas auensis DSM 9187 7885075 YP_002892521.1 CDS Tola_1318 NC_012691.1 1442908 1445259 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(1442908..1445259) Tolumonas auensis DSM 9187 7885076 YP_002892522.1 CDS Tola_1319 NC_012691.1 1445529 1445951 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: abo:ABO_2611 hypothetical protein; hypothetical protein 1445529..1445951 Tolumonas auensis DSM 9187 7885077 YP_002892523.1 CDS Tola_1320 NC_012691.1 1445987 1447321 D PFAM: Ferric reductase domain protein transmembrane component domain; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding 8 domain protein; KEGG: tmz:Tmz1t_1926 ferric reductase domain protein transmembrane component domain protein; Ferric reductase domain-containing protein transmembrane component domain-containing protein 1445987..1447321 Tolumonas auensis DSM 9187 7885078 YP_002892524.1 CDS Tola_1321 NC_012691.1 1447401 1448915 D KEGG: asa:ASA_2981 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; Hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain 1447401..1448915 Tolumonas auensis DSM 9187 7885079 YP_002892525.1 CDS Tola_1322 NC_012691.1 1449012 1450367 D PFAM: protein of unknown function DUF195; KEGG: pha:PSHAb0004 DNA recombination protein RmuC; hypothetical protein 1449012..1450367 Tolumonas auensis DSM 9187 7885080 YP_002892526.1 CDS Tola_1323 NC_012691.1 1450424 1451539 R KEGG: gur:Gura_4371 hypothetical protein; hypothetical protein complement(1450424..1451539) Tolumonas auensis DSM 9187 7885081 YP_002892527.1 CDS Tola_1324 NC_012691.1 1451587 1453014 R PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_2443 major facilitator transporter; major facilitator superfamily protein complement(1451587..1453014) Tolumonas auensis DSM 9187 7885082 YP_002892528.1 CDS Tola_1325 NC_012691.1 1453223 1454125 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: efe:EFER_2674 putative transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1453223..1454125) Tolumonas auensis DSM 9187 7885083 YP_002892529.1 CDS Tola_1326 NC_012691.1 1454303 1455328 D KEGG: ade:Adeh_3220 hypothetical protein; hypothetical protein 1454303..1455328 Tolumonas auensis DSM 9187 7885084 YP_002892530.1 CDS Tola_1327 NC_012691.1 1455505 1457121 D PFAM: Carboxylesterase type B; KEGG: asu:Asuc_2093 carboxylesterase type B; Carboxylesterase type B 1455505..1457121 Tolumonas auensis DSM 9187 7885085 YP_002892531.1 CDS Tola_1328 NC_012691.1 1457290 1459044 D PFAM: Carboxylesterase type B; KEGG: msl:Msil_2379 carboxylesterase type B; Carboxylesterase 1457290..1459044 Tolumonas auensis DSM 9187 7885086 YP_002892532.1 CDS Tola_1329 NC_012691.1 1459062 1459709 R PFAM: aldo/keto reductase; KEGG: ypb:YPTS_1100 aldo/keto reductase; aldo/keto reductase complement(1459062..1459709) Tolumonas auensis DSM 9187 7885087 YP_002892533.1 CDS Tola_1330 NC_012691.1 1459821 1460876 R PFAM: peptidase S15; KEGG: gur:Gura_4372 alpha/beta fold family hydrolase-like protein; peptidase S15 complement(1459821..1460876) Tolumonas auensis DSM 9187 7885088 YP_002892534.1 CDS Tola_1331 NC_012691.1 1460903 1461754 R PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: sus:Acid_2912 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase complement(1460903..1461754) Tolumonas auensis DSM 9187 7885089 YP_002892535.1 CDS Tola_1333 NC_012691.1 1462362 1463213 D PFAM: aldo/keto reductase; KEGG: efe:EFER_2672 putative aldo-keto reductase; aldo/keto reductase 1462362..1463213 Tolumonas auensis DSM 9187 7885091 YP_002892536.1 CDS Tola_1334 NC_012691.1 1463269 1464177 R PFAM: ROK family protein; KEGG: esa:ESA_03872 hypothetical protein; ROK family protein complement(1463269..1464177) Tolumonas auensis DSM 9187 7885092 YP_002892537.1 CDS Tola_1335 NC_012691.1 1464612 1465877 D PFAM: extracellular solute-binding protein family 1; KEGG: lch:Lcho_3299 extracellular solute-binding protein; extracellular solute-binding protein 1464612..1465877 Tolumonas auensis DSM 9187 7885093 YP_002892538.1 CDS Tola_1336 NC_012691.1 1465945 1467066 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_377 ABC transporter sugar permease; binding-protein-dependent transport system inner membrane protein 1465945..1467066 Tolumonas auensis DSM 9187 7885094 YP_002892539.1 CDS Tola_1337 NC_012691.1 1467069 1467968 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0230 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1467069..1467968 Tolumonas auensis DSM 9187 7885095 YP_002892540.1 CDS Tola_1338 NC_012691.1 1468051 1469178 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pin:Ping_2011 ABC transporter ATP-binding protein; ABC transporter 1468051..1469178 Tolumonas auensis DSM 9187 7885096 YP_002892541.1 CDS Tola_1339 NC_012691.1 1469198 1471129 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mfa:Mfla_2611 alpha amylase, catalytic region; alpha amylase 1469198..1471129 Tolumonas auensis DSM 9187 7885097 YP_002892542.1 CDS Tola_1340 NC_012691.1 1471175 1472080 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pfo:Pfl01_4558 LuxR family transcriptional regulator; transcriptional regulator, LuxR family complement(1471175..1472080) Tolumonas auensis DSM 9187 7885098 YP_002892543.1 CDS Tola_1341 NC_012691.1 1472198 1473007 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pap:PSPA7_1543 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1472198..1473007 Tolumonas auensis DSM 9187 7885099 YP_002892544.1 CDS Tola_1342 NC_012691.1 1473087 1474460 D PFAM: amino acid permease-associated region; KEGG: pfo:Pfl01_4556 amino acid permease-associated region; amino acid permease 1473087..1474460 Tolumonas auensis DSM 9187 7885100 YP_002892545.1 CDS Tola_1344 NC_012691.1 1474931 1475764 D PFAM: protein of unknown function DUF88; KEGG: neu:NE0665 hypothetical protein; hypothetical protein 1474931..1475764 Tolumonas auensis DSM 9187 7885102 YP_002892546.1 CDS Tola_1345 NC_012691.1 1475954 1476463 R PFAM: protein of unknown function DUF336; KEGG: lch:Lcho_0452 hypothetical protein; hypothetical protein complement(1475954..1476463) Tolumonas auensis DSM 9187 7885103 YP_002892547.1 CDS Tola_1346 NC_012691.1 1476513 1476917 R KEGG: asa:ASA_1475 hypothetical protein; hypothetical protein complement(1476513..1476917) Tolumonas auensis DSM 9187 7885104 YP_002892548.1 CDS Tola_1347 NC_012691.1 1477000 1478271 R KEGG: ppd:Ppro_2683 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(1477000..1478271) Tolumonas auensis DSM 9187 7885105 YP_002892549.1 CDS Tola_1348 NC_012691.1 1478904 1480001 R PFAM: protein of unknown function UPF0118; KEGG: tmz:Tmz1t_0268 protein of unknown function UPF0118; hypothetical protein complement(1478904..1480001) Tolumonas auensis DSM 9187 7884298 YP_002892550.1 CDS Tola_1349 NC_012691.1 1479994 1480617 R PFAM: protein of unknown function DUF330; KEGG: pmy:Pmen_0370 hypothetical protein; hypothetical protein complement(1479994..1480617) Tolumonas auensis DSM 9187 7884299 YP_002892551.1 CDS Tola_1350 NC_012691.1 1480614 1481552 R PFAM: Mammalian cell entry related domain protein; KEGG: psa:PST_0089 ABC transporter permease; mammalian cell entry domain-containing protein complement(1480614..1481552) Tolumonas auensis DSM 9187 7884300 YP_002892552.1 CDS Tola_1351 NC_012691.1 1481554 1482348 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_0090 probable ATP-binding component of ABC transporter; ABC transporter complement(1481554..1482348) Tolumonas auensis DSM 9187 7884301 YP_002892553.1 CDS Tola_1352 NC_012691.1 1482345 1483490 R PFAM: protein of unknown function DUF140; KEGG: pap:PSPA7_1915 ABC transporter permease; hypothetical protein complement(1482345..1483490) Tolumonas auensis DSM 9187 7884302 YP_002892554.1 CDS Tola_1353 NC_012691.1 1483509 1484183 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb2766 peptide ABC transporter; ABC transporter complement(1483509..1484183) Tolumonas auensis DSM 9187 7884303 YP_002892555.1 CDS Tola_1354 NC_012691.1 1484180 1485424 R PFAM: protein of unknown function DUF214; KEGG: lpc:LPC_2445 ABC transporter, permease protein; hypothetical protein complement(1484180..1485424) Tolumonas auensis DSM 9187 7884304 YP_002892556.1 CDS Tola_1355 NC_012691.1 1485421 1486446 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: lpf:lpl0882 hypothetical protein; RND family efflux transporter MFP subunit complement(1485421..1486446) Tolumonas auensis DSM 9187 7884305 YP_002892557.1 CDS Tola_1356 NC_012691.1 1486576 1487436 D KEGG: tmz:Tmz1t_1944 hypothetical protein; hypothetical protein 1486576..1487436 Tolumonas auensis DSM 9187 7884306 YP_002892558.1 CDS Tola_1357 NC_012691.1 1487718 1488995 D hypothetical protein 1487718..1488995 Tolumonas auensis DSM 9187 7884307 YP_002892559.1 CDS Tola_1358 NC_012691.1 1489371 1490348 D TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eta:ETA_08380 hypothetical protein; CRISPR-associated protein Cas1 1489371..1490348 Tolumonas auensis DSM 9187 7884308 YP_002892560.1 CDS Tola_1359 NC_012691.1 1490345 1493653 D TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: plu:plu1791 hypothetical protein; CRISPR-associated helicase Cas3 family 1490345..1493653 Tolumonas auensis DSM 9187 7884309 YP_002892561.1 CDS Tola_1360 NC_012691.1 1493883 1495199 D TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: eca:ECA3681 hypothetical protein; CRISPR-associated protein, Csy1 family 1493883..1495199 Tolumonas auensis DSM 9187 7884310 YP_002892562.1 CDS Tola_1361 NC_012691.1 1495196 1496173 D TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: eta:ETA_08430 hypothetical protein; CRISPR-associated protein, Csy2 family 1495196..1496173 Tolumonas auensis DSM 9187 7884311 YP_002892563.1 CDS Tola_1362 NC_012691.1 1496185 1497204 D TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: plu:plu1795 hypothetical protein; CRISPR-associated protein, Csy3 family 1496185..1497204 Tolumonas auensis DSM 9187 7884312 YP_002892564.1 CDS Tola_1363 NC_012691.1 1497214 1497768 D TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: eca:ECA3684 hypothetical protein; CRISPR-associated protein, Csy4 family 1497214..1497768 Tolumonas auensis DSM 9187 7884313 YP_002892565.1 CDS Tola_1364 NC_012691.1 1503793 1504878 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1503793..1504878 Tolumonas auensis DSM 9187 7884314 YP_002892566.1 CDS Tola_1365 NC_012691.1 1505052 1506335 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1505052..1506335 Tolumonas auensis DSM 9187 7884315 YP_002892567.1 CDS Tola_1366 NC_012691.1 1506460 1507692 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: asa:ASA_1641 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit complement(1506460..1507692) Tolumonas auensis DSM 9187 7884316 YP_002892568.1 CDS Tola_1367 NC_012691.1 1507927 1508523 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_1094 hydrolase; HAD-superfamily hydrolase 1507927..1508523 Tolumonas auensis DSM 9187 7884317 YP_002892569.1 CDS Tola_1368 NC_012691.1 1509030 1510238 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: saz:Sama_1495 acetate kinase; acetate kinase 1509030..1510238 Tolumonas auensis DSM 9187 7884318 YP_002892570.1 CDS Tola_1369 NC_012691.1 1510307 1512127 R PFAM: carbon starvation protein CstA; KEGG: aha:AHA_3292 carbon starvation protein A; carbon starvation protein CstA complement(1510307..1512127) Tolumonas auensis DSM 9187 7884319 YP_002892571.1 CDS Tola_1370 NC_012691.1 1512285 1513001 R unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT complement(1512285..1513001) Tolumonas auensis DSM 9187 7884320 YP_002892572.1 CDS Tola_1371 NC_012691.1 1512989 1514710 R PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: aha:AHA_3290 sensor protein LytS; signal transduction histidine kinase LytS complement(1512989..1514710) Tolumonas auensis DSM 9187 7884321 YP_002892573.1 CDS Tola_1372 NC_012691.1 1514912 1515913 D PFAM: basic membrane lipoprotein; KEGG: aha:AHA_0219 membrane lipoprotein; basic membrane lipoprotein 1514912..1515913 Tolumonas auensis DSM 9187 7884322 YP_002892574.1 CDS Tola_1373 NC_012691.1 1515996 1517558 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_0218 ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide); ABC transporter 1515996..1517558 Tolumonas auensis DSM 9187 7884323 YP_002892575.1 CDS Tola_1374 NC_012691.1 1517555 1518661 D PFAM: inner-membrane translocator; KEGG: aha:AHA_0217 putative transport system permease ABC transporter protein; inner-membrane translocator 1517555..1518661 Tolumonas auensis DSM 9187 7884324 YP_002892576.1 CDS Tola_1375 NC_012691.1 1518661 1519626 D PFAM: inner-membrane translocator; KEGG: aha:AHA_0216 putative transport system permease ABC transporter protein; inner-membrane translocator 1518661..1519626 Tolumonas auensis DSM 9187 7884325 YP_002892577.1 CDS Tola_1376 NC_012691.1 1519824 1520891 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1519824..1520891 Tolumonas auensis DSM 9187 7884326 YP_002892578.1 CDS tyrA NC_012691.1 1520957 1522084 D catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1520957..1522084 Tolumonas auensis DSM 9187 7884327 YP_002892579.1 CDS Tola_1378 NC_012691.1 1522160 1523161 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: vpa:VP1655 immunogenic protein; TRAP transporter solute receptor, TAXI family complement(1522160..1523161) Tolumonas auensis DSM 9187 7884328 YP_002892580.1 CDS Tola_1379 NC_012691.1 1523214 1524368 R PFAM: aminotransferase class I and II; KEGG: aha:AHA_3110 putative aminotransferase B; class I and II aminotransferase complement(1523214..1524368) Tolumonas auensis DSM 9187 7884329 YP_002892581.1 CDS Tola_1380 NC_012691.1 1524457 1525626 D PFAM: major facilitator superfamily MFS_1; KEGG: aha:AHA_3109 sugar efflux transporter; major facilitator superfamily protein 1524457..1525626 Tolumonas auensis DSM 9187 7884330 YP_002892582.1 CDS Tola_1381 NC_012691.1 1525613 1526569 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pat:Patl_1789 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1525613..1526569) Tolumonas auensis DSM 9187 7884331 YP_002892583.1 CDS Tola_1382 NC_012691.1 1526682 1527701 D SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 1526682..1527701 Tolumonas auensis DSM 9187 7884332 YP_002892584.1 CDS Tola_1383 NC_012691.1 1527858 1530467 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1527858..1530467 Tolumonas auensis DSM 9187 7884333 YP_002892585.1 CDS Tola_1384 NC_012691.1 1530791 1531357 R PFAM: NUDIX hydrolase; KEGG: aha:AHA_2436 MutT/NUDIX family protein; NUDIX hydrolase complement(1530791..1531357) Tolumonas auensis DSM 9187 7884336 YP_002892586.1 CDS Tola_1385 NC_012691.1 1531359 1532729 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: aha:AHA_2435 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I complement(1531359..1532729) Tolumonas auensis DSM 9187 7884337 YP_002892587.1 CDS Tola_1386 NC_012691.1 1532922 1534304 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: aha:AHA_1004 sigma-54 factor interaction domain-containing protein; two component, sigma54 specific, transcriptional regulator, Fis family 1532922..1534304 Tolumonas auensis DSM 9187 7884338 YP_002892588.1 CDS Tola_1387 NC_012691.1 1534338 1535468 D PFAM: domain of unknown function DUF1745; KEGG: sde:Sde_3362 hypothetical protein; hypothetical protein 1534338..1535468 Tolumonas auensis DSM 9187 7884339 YP_002892589.1 CDS Tola_1388 NC_012691.1 1535446 1537473 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: mno:Mnod_4585 multi-sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 1535446..1537473 Tolumonas auensis DSM 9187 7884340 YP_002892590.1 CDS Tola_1389 NC_012691.1 1537493 1538899 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saz:Sama_1273 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase complement(1537493..1538899) Tolumonas auensis DSM 9187 7884341 YP_002892591.1 CDS Tola_1390 NC_012691.1 1539076 1540125 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1539076..1540125 Tolumonas auensis DSM 9187 7884342 YP_002892592.1 CDS Tola_1391 NC_012691.1 1540190 1540840 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_2118 2-deoxyglucose-6-phosphatase; HAD-superfamily hydrolase complement(1540190..1540840) Tolumonas auensis DSM 9187 7884343 YP_002892593.1 CDS Tola_1392 NC_012691.1 1540973 1542331 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aha:AHA_2114 multidrug resistance protein MdtK; MATE efflux family protein complement(1540973..1542331) Tolumonas auensis DSM 9187 7884344 YP_002892594.1 CDS Tola_1393 NC_012691.1 1542375 1542584 R PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein; hypothetical protein complement(1542375..1542584) Tolumonas auensis DSM 9187 7884345 YP_002892595.1 CDS Tola_1394 NC_012691.1 1542656 1543525 R PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: vha:VIBHAR_02239 hypothetical protein; fructosamine kinase complement(1542656..1543525) Tolumonas auensis DSM 9187 7884346 YP_002892596.1 CDS Tola_1395 NC_012691.1 1543704 1544861 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aha:AHA_2739 pilus retraction protein PilT; twitching motility protein 1543704..1544861 Tolumonas auensis DSM 9187 7884347 YP_002892597.1 CDS Tola_1396 NC_012691.1 1544929 1545813 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: vfi:VF_2332 drug/metabolite exporter family protein; hypothetical protein 1544929..1545813 Tolumonas auensis DSM 9187 7884348 YP_002892598.1 CDS Tola_1397 NC_012691.1 1545810 1546505 R PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: aha:AHA_2851 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase complement(1545810..1546505) Tolumonas auensis DSM 9187 7884349 YP_002892599.1 CDS Tola_1398 NC_012691.1 1546529 1547140 R PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: dps:DP0702 hypothetical protein; hypothetical protein complement(1546529..1547140) Tolumonas auensis DSM 9187 7884350 YP_002892600.1 CDS Tola_1399 NC_012691.1 1547266 1547907 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase complement(1547266..1547907) Tolumonas auensis DSM 9187 7884351 YP_002892601.1 CDS Tola_1400 NC_012691.1 1548009 1548899 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_0810 LysR family transcriptional regulator; LysR family transcriptional regulator 1548009..1548899 Tolumonas auensis DSM 9187 7884352 YP_002892602.1 CDS Tola_1401 NC_012691.1 1548936 1549394 D PFAM: protein of unknown function DUF307; KEGG: reu:Reut_B5323 hypothetical protein; hypothetical protein 1548936..1549394 Tolumonas auensis DSM 9187 7884353 YP_002892603.1 CDS Tola_1402 NC_012691.1 1549400 1550305 D PFAM: Domain of unknown function DUF1848; KEGG: ppd:Ppro_0347 hypothetical protein; hypothetical protein 1549400..1550305 Tolumonas auensis DSM 9187 7884354 YP_002892604.1 CDS Tola_1403 NC_012691.1 1550348 1550644 R PFAM: protein of unknown function UPF0153; KEGG: ppr:PBPRA2316 hypothetical protein; hypothetical protein complement(1550348..1550644) Tolumonas auensis DSM 9187 7884355 YP_002892605.1 CDS Tola_1404 NC_012691.1 1550715 1551458 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ppd:Ppro_0182 radical SAM domain-containing protein; radical SAM protein complement(1550715..1551458) Tolumonas auensis DSM 9187 7884356 YP_002892606.1 CDS Tola_1405 NC_012691.1 1551538 1551921 R PFAM: protein of unknown function DUF202; KEGG: nmu:Nmul_A1758 hypothetical protein; hypothetical protein complement(1551538..1551921) Tolumonas auensis DSM 9187 7884357 YP_002892607.1 CDS Tola_1406 NC_012691.1 1552068 1552817 R PFAM: Alginate lyase 2; KEGG: pmy:Pmen_3057 hypothetical protein; alginate lyase complement(1552068..1552817) Tolumonas auensis DSM 9187 7884358 YP_002892608.1 CDS Tola_1407 NC_012691.1 1553798 1555108 D KEGG: pmy:Pmen_1031 GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1553798..1555108 Tolumonas auensis DSM 9187 7884359 YP_002892609.1 CDS Tola_1408 NC_012691.1 1555269 1556741 D KEGG: pag:PLES_14921 alginate biosynthesis protein Alg8; alginate biosynthesis protein Alg8 1555269..1556741 Tolumonas auensis DSM 9187 7884360 YP_002892610.1 CDS Tola_1409 NC_012691.1 1556805 1557992 D PFAM: type IV pilus assembly PilZ; KEGG: pag:PLES_14911 alginate biosynthesis protein Alg44; type IV pilus assembly PilZ 1556805..1557992 Tolumonas auensis DSM 9187 7884361 YP_002892611.1 CDS Tola_1410 NC_012691.1 1558004 1559272 D SMART: Sel1 domain protein repeat-containing protein; KEGG: pag:PLES_14901 alginate biosynthetic protein AlgK precursor; Sel1 domain-containing protein repeat-containing protein 1558004..1559272 Tolumonas auensis DSM 9187 7884362 YP_002892612.1 CDS Tola_1411 NC_012691.1 1559324 1560877 D KEGG: pfo:Pfl01_0955 carbohydrate binding and sugar hydrolysis; carbohydrate-binding protein 1559324..1560877 Tolumonas auensis DSM 9187 7884363 YP_002892613.1 CDS Tola_1412 NC_012691.1 1560889 1562250 D KEGG: pmy:Pmen_1025 hypothetical protein; hypothetical protein 1560889..1562250 Tolumonas auensis DSM 9187 7884364 YP_002892614.1 CDS algL NC_012691.1 1562253 1563407 D Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; poly(beta-D-mannuronate) lyase 1562253..1563407 Tolumonas auensis DSM 9187 7884365 YP_002892615.1 CDS Tola_1414 NC_012691.1 1563404 1564873 D KEGG: pmy:Pmen_1677 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1563404..1564873 Tolumonas auensis DSM 9187 7884366 YP_002892616.1 CDS Tola_1415 NC_012691.1 1564968 1566341 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: spe:Spro_1600 phosphomannomutase; phosphomannomutase 1564968..1566341 Tolumonas auensis DSM 9187 7884367 YP_002892617.1 CDS Tola_1416 NC_012691.1 1566346 1567605 D KEGG: asa:ASA_2944 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 1566346..1567605 Tolumonas auensis DSM 9187 7884368 YP_002892618.1 CDS Tola_1417 NC_012691.1 1567668 1568963 D KEGG: pap:PSPA7_1600 alginate-C5-mannuronan-epimerase AlgG; hypothetical protein 1567668..1568963 Tolumonas auensis DSM 9187 7884369 YP_002892619.1 CDS rlmL NC_012691.1 1569294 1571432 D catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1569294..1571432 Tolumonas auensis DSM 9187 7884371 YP_002892620.1 CDS Tola_1419 NC_012691.1 1571438 1573360 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_2283 ABC transporter ATP-binding protein; ABC transporter 1571438..1573360 Tolumonas auensis DSM 9187 7884372 YP_002892621.1 CDS Tola_1420 NC_012691.1 1573367 1575079 D KEGG: asa:ASA_1998 hypothetical protein; hypothetical protein 1573367..1575079 Tolumonas auensis DSM 9187 7884373 YP_002892622.1 CDS Tola_1421 NC_012691.1 1575230 1575406 D PFAM: ribosome modulation factor; KEGG: asa:ASA_1999 ribosome modulation factor; ribosome modulation factor 1575230..1575406 Tolumonas auensis DSM 9187 7884374 YP_002892623.1 CDS Tola_1422 NC_012691.1 1575471 1576028 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(1575471..1576028) Tolumonas auensis DSM 9187 7884375 YP_002892624.1 CDS Tola_1423 NC_012691.1 1576086 1578077 R KEGG: aha:AHA_2279 S16 family peptidase; S16 family peptidase complement(1576086..1578077) Tolumonas auensis DSM 9187 7884376 YP_002892625.1 CDS Tola_1424 NC_012691.1 1578074 1578250 R hypothetical protein complement(1578074..1578250) Tolumonas auensis DSM 9187 7884377 YP_002892626.1 CDS Tola_1425 NC_012691.1 1578530 1579207 D PFAM: DTW domain containing protein; KEGG: psb:Psyr_1382 DTW; DTW domain containing protein 1578530..1579207 Tolumonas auensis DSM 9187 7884945 YP_002892627.1 CDS Tola_1426 NC_012691.1 1579334 1579870 D KEGG: ppr:PBPRB0858 hypothetical protein; hypothetical protein 1579334..1579870 Tolumonas auensis DSM 9187 7884946 YP_002892628.1 CDS Tola_1427 NC_012691.1 1579910 1580188 R PFAM: ferredoxin; KEGG: ppr:PBPRA2461 iron-sulfur cluster-binding protein; ferredoxin complement(1579910..1580188) Tolumonas auensis DSM 9187 7884947 YP_002892629.1 CDS nrdB NC_012691.1 1580185 1581318 R B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta complement(1580185..1581318) Tolumonas auensis DSM 9187 7884948 YP_002892630.1 CDS Tola_1429 NC_012691.1 1581499 1583775 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1581499..1583775) Tolumonas auensis DSM 9187 7884949 YP_002892631.1 CDS Tola_1430 NC_012691.1 1583965 1584633 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: asa:ASA_1947 phosphoglycolate phosphatase; HAD-superfamily hydrolase complement(1583965..1584633) Tolumonas auensis DSM 9187 7884950 YP_002892632.1 CDS Tola_1431 NC_012691.1 1584630 1585328 R KEGG: ypb:YPTS_1342 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase complement(1584630..1585328) Tolumonas auensis DSM 9187 7884951 YP_002892633.1 CDS Tola_1432 NC_012691.1 1585491 1588079 D KEGG: aha:AHA_2330 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; DNA gyrase subunit A 1585491..1588079 Tolumonas auensis DSM 9187 7884952 YP_002892634.1 CDS Tola_1433 NC_012691.1 1588102 1588779 D KEGG: sbn:Sbal195_0116 hypothetical protein; hypothetical protein 1588102..1588779 Tolumonas auensis DSM 9187 7884953 YP_002892635.1 CDS Tola_1434 NC_012691.1 1588841 1589983 R KEGG: dar:Daro_0451 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1588841..1589983) Tolumonas auensis DSM 9187 7884954 YP_002892636.1 CDS Tola_1435 NC_012691.1 1589980 1590507 R KEGG: azo:azo1378 phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(1589980..1590507) Tolumonas auensis DSM 9187 7884955 YP_002892637.1 CDS Tola_1436 NC_012691.1 1590552 1590851 R KEGG: asa:ASA_0073 hypothetical protein; hypothetical protein complement(1590552..1590851) Tolumonas auensis DSM 9187 7884956 YP_002892638.1 CDS Tola_1437 NC_012691.1 1590848 1591789 R PFAM: protein of unknown function DUF897; KEGG: aha:AHA_0072 sodium bicarbonate cotransporter; hypothetical protein complement(1590848..1591789) Tolumonas auensis DSM 9187 7884957 YP_002892639.1 CDS Tola_1438 NC_012691.1 1591966 1592877 D PFAM: regulatory protein LysR; KEGG: sde:Sde_2804 LysR family transcriptional regulator; LysR family transcriptional regulator 1591966..1592877 Tolumonas auensis DSM 9187 7884958 YP_002892640.1 CDS Tola_1439 NC_012691.1 1592968 1593951 D PFAM: dihydrouridine synthase DuS; KEGG: vpa:VP2075 putative regulator protein; dihydrouridine synthase DuS 1592968..1593951 Tolumonas auensis DSM 9187 7884959 YP_002892641.1 CDS Tola_1440 NC_012691.1 1593971 1594591 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(1593971..1594591) Tolumonas auensis DSM 9187 7884960 YP_002892642.1 CDS Tola_1441 NC_012691.1 1594625 1595890 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: eta:ETA_10590 uracil transport enzyme (NCS2 family uracil transport protein); uracil-xanthine permease complement(1594625..1595890) Tolumonas auensis DSM 9187 7884961 YP_002892643.1 CDS Tola_1442 NC_012691.1 1596111 1596518 R KEGG: asa:ASA_2492 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(1596111..1596518) Tolumonas auensis DSM 9187 7884962 YP_002892644.1 CDS Tola_1443 NC_012691.1 1596522 1597163 R KEGG: asa:ASA_2491 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(1596522..1597163) Tolumonas auensis DSM 9187 7884963 YP_002892645.1 CDS Tola_1444 NC_012691.1 1597167 1597910 R TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: vfm:VFMJ11_0969 electron transport complex protein RnfE; RnfABCDGE type electron transport complex subunit E complement(1597167..1597910) Tolumonas auensis DSM 9187 7884964 YP_002892646.1 CDS Tola_1445 NC_012691.1 1597910 1598536 R TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: aha:AHA_2638 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G complement(1597910..1598536) Tolumonas auensis DSM 9187 7884965 YP_002892647.1 CDS Tola_1446 NC_012691.1 1598539 1599585 R TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: efe:EFER_1413 putative inner membrane oxidoreductase; RnfABCDGE type electron transport complex subunit D complement(1598539..1599585) Tolumonas auensis DSM 9187 7884966 YP_002892648.1 CDS Tola_1447 NC_012691.1 1599591 1601705 R TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aha:AHA_2636 electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C complement(1599591..1601705) Tolumonas auensis DSM 9187 7884967 YP_002892649.1 CDS Tola_1448 NC_012691.1 1601702 1602259 R TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aha:AHA_2635 electron transport complex protein RnfB; RnfABCDGE type electron transport complex subunit B complement(1601702..1602259) Tolumonas auensis DSM 9187 7884968 YP_002892650.1 CDS Tola_1449 NC_012691.1 1602263 1602844 R TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: ppr:PBPRA2560 Na(+)-translocating NADH-quinone reductase subunit E; RnfABCDGE type electron transport complex subunit A complement(1602263..1602844) Tolumonas auensis DSM 9187 7884969 YP_002892651.1 CDS Tola_1450 NC_012691.1 1602987 1603889 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: asa:ASA_2484 hypothetical protein; hypothetical protein 1602987..1603889 Tolumonas auensis DSM 9187 7884970 YP_002892652.1 CDS Tola_1451 NC_012691.1 1603938 1604291 R KEGG: asa:ASA_1832 hypothetical protein; hypothetical protein complement(1603938..1604291) Tolumonas auensis DSM 9187 7884971 YP_002892653.1 CDS Tola_1452 NC_012691.1 1604345 1604860 R PFAM: protein of unknown function DUF45; KEGG: pfl:PFL_5778 hypothetical protein; hypothetical protein complement(1604345..1604860) Tolumonas auensis DSM 9187 7884972 YP_002892654.1 CDS Tola_1453 NC_012691.1 1604867 1605118 R KEGG: ypi:YpsIP31758_2838 hypothetical protein; hypothetical protein complement(1604867..1605118) Tolumonas auensis DSM 9187 7884973 YP_002892655.1 CDS Tola_1454 NC_012691.1 1605253 1606014 D PFAM: protein of unknown function DUF81; KEGG: wsu:WS1179 hypothetical protein; hypothetical protein 1605253..1606014 Tolumonas auensis DSM 9187 7884974 YP_002892656.1 CDS Tola_1455 NC_012691.1 1606079 1606195 D hypothetical protein 1606079..1606195 Tolumonas auensis DSM 9187 7884975 YP_002892657.1 CDS Tola_1456 NC_012691.1 1606274 1607905 D KEGG: aha:AHA_2397 homology with RecF protein; RecF-like protein 1606274..1607905 Tolumonas auensis DSM 9187 7884976 YP_002892658.1 CDS Tola_1457 NC_012691.1 1607951 1608913 R KEGG: asa:ASA_2233 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(1607951..1608913) Tolumonas auensis DSM 9187 7884977 YP_002892659.1 CDS tpiA NC_012691.1 1609079 1609834 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1609079..1609834) Tolumonas auensis DSM 9187 7884978 YP_002892660.1 CDS Tola_1459 NC_012691.1 1610021 1610776 R PFAM: protein of unknown function DUF218; KEGG: aha:AHA_2381 integral membrane protein; hypothetical protein complement(1610021..1610776) Tolumonas auensis DSM 9187 7884979 YP_002892661.1 CDS Tola_1460 NC_012691.1 1610871 1611638 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aha:AHA_2380 SmtA protein; type 11 methyltransferase 1610871..1611638 Tolumonas auensis DSM 9187 7884980 YP_002892662.1 CDS Tola_1461 NC_012691.1 1611655 1612992 D acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1611655..1612992 Tolumonas auensis DSM 9187 7884981 YP_002892663.1 CDS Tola_1462 NC_012691.1 1612973 1613695 D acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1612973..1613695 Tolumonas auensis DSM 9187 7884982 YP_002892664.1 CDS mukB NC_012691.1 1613692 1618134 D SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1613692..1618134 Tolumonas auensis DSM 9187 7884983 YP_002892665.1 CDS Tola_1465 NC_012691.1 1618436 1619572 R PFAM: transposase IS4 family protein; KEGG: ppr:PBPRB1199 putative RfbQRSO155-1; transposase IS4 family protein complement(1618436..1619572) Tolumonas auensis DSM 9187 7884985 YP_002892666.1 CDS Tola_1466 NC_012691.1 1620446 1621435 D KEGG: asa:ASA_1545 hypothetical protein; hypothetical protein 1620446..1621435 Tolumonas auensis DSM 9187 7884986 YP_002892667.1 CDS Tola_1467 NC_012691.1 1621544 1622734 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1621544..1622734 Tolumonas auensis DSM 9187 7884987 YP_002892668.1 CDS Tola_1468 NC_012691.1 1622811 1623893 R PFAM: basic membrane lipoprotein; KEGG: mmw:Mmwyl1_1923 basic membrane lipoprotein; basic membrane lipoprotein complement(1622811..1623893) Tolumonas auensis DSM 9187 7884988 YP_002892669.1 CDS Tola_1469 NC_012691.1 1623919 1624845 R PFAM: inner-membrane translocator; KEGG: mmw:Mmwyl1_1924 inner-membrane translocator; inner-membrane translocator complement(1623919..1624845) Tolumonas auensis DSM 9187 7884989 YP_002892670.1 CDS Tola_1470 NC_012691.1 1624838 1625908 R PFAM: inner-membrane translocator; KEGG: mmw:Mmwyl1_1925 inner-membrane translocator; inner-membrane translocator complement(1624838..1625908) Tolumonas auensis DSM 9187 7884990 YP_002892671.1 CDS Tola_1471 NC_012691.1 1625915 1627435 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_1926 ABC transporter related; ABC transporter complement(1625915..1627435) Tolumonas auensis DSM 9187 7884991 YP_002892672.1 CDS Tola_1472 NC_012691.1 1627793 1629889 D PFAM: UvrD/REP helicase; KEGG: ppr:PBPRA1228 DNA helicase IV; UvrD/REP helicase 1627793..1629889 Tolumonas auensis DSM 9187 7884992 YP_002892673.1 CDS Tola_1473 NC_012691.1 1629992 1631188 D PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV_0798 major facilitator superfamily fosmidomycin resistance protein; major facilitator superfamily protein 1629992..1631188 Tolumonas auensis DSM 9187 7884993 YP_002892674.1 CDS Tola_1474 NC_012691.1 1631232 1631735 R PFAM: conserved hypothetical protein; KEGG: vco:VC0395_A2587 hypothetical protein; hypothetical protein complement(1631232..1631735) Tolumonas auensis DSM 9187 7884994 YP_002892675.1 CDS Tola_1475 NC_012691.1 1631845 1632405 R KEGG: vvy:VVA1661 acetyltransferase; Maltose O-acetyltransferase complement(1631845..1632405) Tolumonas auensis DSM 9187 7884995 YP_002892676.1 CDS Tola_1476 NC_012691.1 1632958 1633620 R PFAM: thiopurine S-methyltransferase; KEGG: dar:Daro_0514 thiopurine S-methyltransferase; Thiopurine S-methyltransferase complement(1632958..1633620) Tolumonas auensis DSM 9187 7884996 YP_002892677.1 CDS Tola_1477 NC_012691.1 1633804 1634508 R KEGG: lch:Lcho_3775 hypothetical protein; hypothetical protein complement(1633804..1634508) Tolumonas auensis DSM 9187 7884997 YP_002892678.1 CDS Tola_1478 NC_012691.1 1634724 1635035 R KEGG: sbl:Sbal_2411 hypothetical protein; hypothetical protein complement(1634724..1635035) Tolumonas auensis DSM 9187 7884998 YP_002892679.1 CDS Tola_1479 NC_012691.1 1635151 1635795 R PFAM: peptidase M50; KEGG: bcy:Bcer98_3898 peptidase M50; peptidase M50 complement(1635151..1635795) Tolumonas auensis DSM 9187 7884999 YP_002892680.1 CDS Tola_1480 NC_012691.1 1635944 1636522 R KEGG: bca:BCE_A0238 hypothetical protein; hypothetical protein complement(1635944..1636522) Tolumonas auensis DSM 9187 7885000 YP_002892681.1 CDS Tola_1481 NC_012691.1 1636682 1636987 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB 1636682..1636987 Tolumonas auensis DSM 9187 7885001 YP_002892682.1 CDS Tola_1482 NC_012691.1 1637058 1638491 D PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase family 1 1637058..1638491 Tolumonas auensis DSM 9187 7885002 YP_002892683.1 CDS Tola_1483 NC_012691.1 1638539 1638799 D PFAM: MtN3 and saliva related transmembrane protein; KEGG: pol:Bpro_4623 hypothetical protein; MtN3 and saliva related transmembrane protein 1638539..1638799 Tolumonas auensis DSM 9187 7885003 YP_002892684.1 CDS Tola_1484 NC_012691.1 1638881 1640209 R catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase complement(1638881..1640209) Tolumonas auensis DSM 9187 7885004 YP_002892685.1 CDS Tola_1485 NC_012691.1 1640742 1641509 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_1051 ABC transporter related; ABC transporter 1640742..1641509 Tolumonas auensis DSM 9187 7885005 YP_002892686.1 CDS Tola_1486 NC_012691.1 1641517 1642419 D PFAM: periplasmic binding protein; KEGG: csa:Csal_1050 periplasmic binding protein; periplasmic binding protein 1641517..1642419 Tolumonas auensis DSM 9187 7885006 YP_002892687.1 CDS Tola_1487 NC_012691.1 1642424 1644316 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1642424..1644316 Tolumonas auensis DSM 9187 7885007 YP_002892688.1 CDS Tola_1488 NC_012691.1 1644351 1646528 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ypy:YPK_2469 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1644351..1646528) Tolumonas auensis DSM 9187 7885008 YP_002892689.1 CDS Tola_1489 NC_012691.1 1646645 1648300 R efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane protein/ATP-binding component complement(1646645..1648300) Tolumonas auensis DSM 9187 7885009 YP_002892690.1 CDS Tola_1490 NC_012691.1 1648520 1649359 D hypothetical protein 1648520..1649359 Tolumonas auensis DSM 9187 7885010 YP_002892691.1 CDS Tola_1491 NC_012691.1 1649368 1650285 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_2621 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1649368..1650285) Tolumonas auensis DSM 9187 7885011 YP_002892692.1 CDS Tola_1492 NC_012691.1 1650469 1651626 D PFAM: iron-containing alcohol dehydrogenase; KEGG: pin:Ping_2513 alcohol dehydrogenase, NAD(P)-dependent, iron-containing; iron-containing alcohol dehydrogenase 1650469..1651626 Tolumonas auensis DSM 9187 7885012 YP_002892693.1 CDS Tola_1493 NC_012691.1 1651935 1652786 R PFAM: UspA domain protein; KEGG: spc:Sputcn32_1227 UspA domain-containing protein; UspA domain-containing protein complement(1651935..1652786) Tolumonas auensis DSM 9187 7885013 YP_002892694.1 CDS Tola_1494 NC_012691.1 1652805 1654289 R PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: hch:HCH_02510 sulfate permease family protein; sulfate transporter complement(1652805..1654289) Tolumonas auensis DSM 9187 7885014 YP_002892695.1 CDS Tola_1495 NC_012691.1 1654664 1655764 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eta:ETA_13680 xenobiotic reductase A; NADH:flavin oxidoreductase complement(1654664..1655764) Tolumonas auensis DSM 9187 7885015 YP_002892696.1 CDS Tola_1496 NC_012691.1 1655861 1656781 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: shn:Shewana3_2430 LysR family transcriptional regulator; LysR family transcriptional regulator 1655861..1656781 Tolumonas auensis DSM 9187 7885016 YP_002892697.1 CDS Tola_1497 NC_012691.1 1656831 1657763 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ppw:PputW619_2128 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 1656831..1657763 Tolumonas auensis DSM 9187 7885017 YP_002892698.1 CDS Tola_1498 NC_012691.1 1657757 1658653 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3724 LysR family transcriptional regulator; LysR family transcriptional regulator 1657757..1658653 Tolumonas auensis DSM 9187 7885018 YP_002892699.1 CDS Tola_1500 NC_012691.1 1658848 1660491 R PFAM: Carboxylesterase type B; KEGG: msl:Msil_0684 carboxylesterase type B; Carboxylesterase complement(1658848..1660491) Tolumonas auensis DSM 9187 7885020 YP_002892700.1 CDS Tola_1501 NC_012691.1 1660679 1661572 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE0343 LysR family transcriptional regulator; LysR family transcriptional regulator 1660679..1661572 Tolumonas auensis DSM 9187 7885021 YP_002892701.1 CDS Tola_1502 NC_012691.1 1661881 1662867 D PFAM: aldo/keto reductase; KEGG: yen:YE0342 putative aldo/keto reductase; aldo/keto reductase 1661881..1662867 Tolumonas auensis DSM 9187 7885022 YP_002892702.1 CDS Tola_1503 NC_012691.1 1662935 1663264 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE0340 hypothetical protein; antibiotic biosynthesis monooxygenase 1662935..1663264 Tolumonas auensis DSM 9187 7885023 YP_002892703.1 CDS Tola_1504 NC_012691.1 1663280 1663915 R PFAM: Carboxymuconolactone decarboxylase; KEGG: gur:Gura_4370 cupin 2 domain-containing protein; Carboxymuconolactone decarboxylase complement(1663280..1663915) Tolumonas auensis DSM 9187 7885024 YP_002892704.1 CDS Tola_1506 NC_012691.1 1664327 1666198 R TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sat:SYN_01370 iron only hydrogenase large subunit; hydrogenase, Fe-only complement(1664327..1666198) Tolumonas auensis DSM 9187 7885026 YP_002892705.1 CDS Tola_1507 NC_012691.1 1666199 1667911 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: msl:Msil_2751 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(1666199..1667911) Tolumonas auensis DSM 9187 7885108 YP_002892706.1 CDS Tola_1509 NC_012691.1 1669338 1670489 R KEGG: eca:ECA2173 hypothetical protein; hypothetical protein complement(1669338..1670489) Tolumonas auensis DSM 9187 7885110 YP_002892707.1 CDS Tola_1510 NC_012691.1 1670750 1671160 D KEGG: bur:Bcep18194_A3945 hypothetical protein; hypothetical protein 1670750..1671160 Tolumonas auensis DSM 9187 7885111 YP_002892708.1 CDS Tola_1511 NC_012691.1 1671165 1671788 D KEGG: bmj:BMULJ_00707 hypothetical protein; hypothetical protein 1671165..1671788 Tolumonas auensis DSM 9187 7885112 YP_002892709.1 CDS Tola_1512 NC_012691.1 1671800 1672282 D KEGG: reu:Reut_B5723 hypothetical protein; hypothetical protein 1671800..1672282 Tolumonas auensis DSM 9187 7885113 YP_002892710.1 CDS Tola_1513 NC_012691.1 1672274 1673767 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(1672274..1673767) Tolumonas auensis DSM 9187 7885114 YP_002892711.1 CDS Tola_1514 NC_012691.1 1673917 1674222 D KEGG: asa:ASA_1250 hypothetical protein; hypothetical protein 1673917..1674222 Tolumonas auensis DSM 9187 7885115 YP_002892712.1 CDS Tola_1515 NC_012691.1 1674311 1674793 R hypothetical protein complement(1674311..1674793) Tolumonas auensis DSM 9187 7885116 YP_002892713.1 CDS Tola_1516 NC_012691.1 1674813 1675937 R membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B complement(1674813..1675937) Tolumonas auensis DSM 9187 7885117 YP_002892714.1 CDS Tola_1517 NC_012691.1 1676115 1678559 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: aha:AHA_2689 beta-glucosidase; glycoside hydrolase family 3 complement(1676115..1678559) Tolumonas auensis DSM 9187 7885118 YP_002892715.1 CDS Tola_1518 NC_012691.1 1678955 1679995 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: asa:ASA_2543 AraC family transcriptional regulator; AraC family transcriptional regulator 1678955..1679995 Tolumonas auensis DSM 9187 7885119 YP_002892716.1 CDS Tola_1519 NC_012691.1 1680197 1681180 D PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_4529 aldo/keto reductase; aldo/keto reductase 1680197..1681180 Tolumonas auensis DSM 9187 7885120 YP_002892717.1 CDS Tola_1520 NC_012691.1 1681360 1681656 R hypothetical protein complement(1681360..1681656) Tolumonas auensis DSM 9187 7885121 YP_002892718.1 CDS Tola_1521 NC_012691.1 1681980 1682855 D hypothetical protein 1681980..1682855 Tolumonas auensis DSM 9187 7885122 YP_002892719.1 CDS Tola_1522 NC_012691.1 1683728 1686664 D PFAM: histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: asa:ASA_3357 chemotaxis sensory transducer family protein; metal dependent phosphohydrolase 1683728..1686664 Tolumonas auensis DSM 9187 7885123 YP_002892720.1 CDS Tola_1523 NC_012691.1 1686639 1687937 R PFAM: integrase family protein; KEGG: aha:AHA_2278 phage integrase family site specific recombinase; integrase family protein complement(1686639..1687937) Tolumonas auensis DSM 9187 7885124 YP_002892721.1 CDS Tola_1524 NC_012691.1 1688118 1689314 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1688118..1689314 Tolumonas auensis DSM 9187 7885125 YP_002892722.1 CDS Tola_1525 NC_012691.1 1689596 1690201 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: slo:Shew_3529 azoreductase; NAD(P)H dehydrogenase (quinone) 1689596..1690201 Tolumonas auensis DSM 9187 7885126 YP_002892723.1 CDS Tola_1526 NC_012691.1 1690247 1690867 D KEGG: swi:Swit_3244 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1690247..1690867 Tolumonas auensis DSM 9187 7885127 YP_002892724.1 CDS Tola_1527 NC_012691.1 1691076 1691816 D PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: vpa:VPA0303 putative regulatory protein; Cro/CI family transcriptional regulator 1691076..1691816 Tolumonas auensis DSM 9187 7885128 YP_002892725.1 CDS dcd NC_012691.1 1691853 1692434 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1691853..1692434) Tolumonas auensis DSM 9187 7885129 YP_002892726.1 CDS Tola_1529 NC_012691.1 1692455 1693099 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(1692455..1693099) Tolumonas auensis DSM 9187 7885130 YP_002892727.1 CDS Tola_1530 NC_012691.1 1693172 1694245 R KEGG: asa:ASA_2069 Mrp protein; Mrp protein complement(1693172..1694245) Tolumonas auensis DSM 9187 7885131 YP_002892728.1 CDS metG NC_012691.1 1694372 1696399 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1694372..1696399 Tolumonas auensis DSM 9187 7885132 YP_002892729.1 CDS Tola_1532 NC_012691.1 1696412 1697146 D PFAM: DSBA oxidoreductase; KEGG: aha:AHA_1114 outer membrane protein; DSBA oxidoreductase 1696412..1697146 Tolumonas auensis DSM 9187 7885133 YP_002892730.1 CDS Tola_1533 NC_012691.1 1697210 1698355 D PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: ent:Ent638_0491 cupin 4 family protein; cupin 1697210..1698355 Tolumonas auensis DSM 9187 7885134 YP_002892731.1 CDS Tola_1534 NC_012691.1 1698397 1698636 R hypothetical protein complement(1698397..1698636) Tolumonas auensis DSM 9187 7885135 YP_002892732.1 CDS Tola_1535 NC_012691.1 1699059 1700444 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rru:Rru_A1030 amino acid permease-associated region; ethanolamine transporter 1699059..1700444 Tolumonas auensis DSM 9187 7885136 YP_002892733.1 CDS Tola_1536 NC_012691.1 1700455 1701846 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1700455..1701846 Tolumonas auensis DSM 9187 7885137 YP_002892734.1 CDS Tola_1537 NC_012691.1 1701843 1702637 D PFAM: Ethanolamine ammonia-lyase light chain; KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; ethanolamine ammonia-lyase 1701843..1702637 Tolumonas auensis DSM 9187 7885138 YP_002892735.1 CDS Tola_1538 NC_012691.1 1702843 1703832 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: aha:AHA_4145 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1702843..1703832 Tolumonas auensis DSM 9187 7885139 YP_002892736.1 CDS Tola_1539 NC_012691.1 1704050 1704613 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: aha:AHA_2070 GPR1/FUN34/YaaH family membrane protein; GPR1/FUN34/yaaH family protein 1704050..1704613 Tolumonas auensis DSM 9187 7885140 YP_002892737.1 CDS Tola_1540 NC_012691.1 1704725 1706038 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aha:AHA_2584 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1704725..1706038) Tolumonas auensis DSM 9187 7885141 YP_002892738.1 CDS Tola_1541 NC_012691.1 1706095 1706646 R PFAM: protein of unknown function UPF0227; KEGG: aha:AHA_2585 hypothetical protein; hypothetical protein complement(1706095..1706646) Tolumonas auensis DSM 9187 7885142 YP_002892739.1 CDS Tola_1542 NC_012691.1 1706753 1707757 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: ype:YPO1615 beta-hexosaminidase; glycoside hydrolase family 3 complement(1706753..1707757) Tolumonas auensis DSM 9187 7885143 YP_002892740.1 CDS Tola_1543 NC_012691.1 1707922 1709085 D TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: asa:ASA_3238 chorismate mutase/prephenate dehydratase; chorismate mutase 1707922..1709085 Tolumonas auensis DSM 9187 7885144 YP_002892741.1 CDS Tola_1544 NC_012691.1 1709138 1709677 R PFAM: protein of unknown function DUF1379; KEGG: asa:ASA_1994 hypothetical protein; hypothetical protein complement(1709138..1709677) Tolumonas auensis DSM 9187 7885145 YP_002892742.1 CDS Tola_1545 NC_012691.1 1709761 1710774 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1709761..1710774) Tolumonas auensis DSM 9187 7885146 YP_002892743.1 CDS pepN NC_012691.1 1710975 1713572 R TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: yen:YE1567 putative aminopeptidase N; aminopeptidase N complement(1710975..1713572) Tolumonas auensis DSM 9187 7885147 YP_002892744.1 CDS Tola_1547 NC_012691.1 1713776 1714423 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: vfm:VFMJ11_1747 response regulator UvrY; two component transcriptional regulator, LuxR family 1713776..1714423 Tolumonas auensis DSM 9187 7885148 YP_002892745.1 CDS Tola_1548 NC_012691.1 1714442 1716286 D KEGG: aha:AHA_2773 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 1714442..1716286 Tolumonas auensis DSM 9187 7885149 YP_002892746.1 CDS Tola_1549 NC_012691.1 1716308 1716859 D KEGG: aha:AHA_2772 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1716308..1716859 Tolumonas auensis DSM 9187 7885150 YP_002892747.1 CDS Tola_1550 NC_012691.1 1717554 1718573 R KEGG: son:SO_4578 transposase, putative; transposase complement(1717554..1718573) Tolumonas auensis DSM 9187 7885154 YP_002892748.1 CDS Tola_1551 NC_012691.1 1718994 1719401 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: vpa:VP1133 DNA-binding protein H-NS; histone family protein nucleoid-structuring protein H-NS 1718994..1719401 Tolumonas auensis DSM 9187 7885155 YP_002892749.1 CDS Tola_1552 NC_012691.1 1719406 1720008 D PFAM: Rhomboid family protein; KEGG: asa:ASA_1773 hypothetical protein; rhomboid family protein 1719406..1720008 Tolumonas auensis DSM 9187 7885156 YP_002892750.1 CDS Tola_1553 NC_012691.1 1720036 1720734 R KEGG: aha:AHA_1813 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(1720036..1720734) Tolumonas auensis DSM 9187 7885157 YP_002892751.1 CDS Tola_1554 NC_012691.1 1720753 1721910 R SMART: Tetratricopeptide domain protein; KEGG: aha:AHA_1812 hypothetical protein; hypothetical protein complement(1720753..1721910) Tolumonas auensis DSM 9187 7885158 YP_002892752.1 CDS Tola_1555 NC_012691.1 1721919 1722203 R PFAM: protein of unknown function DUF1049; KEGG: esa:ESA_01577 hypothetical protein; hypothetical protein complement(1721919..1722203) Tolumonas auensis DSM 9187 7885159 YP_002892753.1 CDS Tola_1556 NC_012691.1 1722226 1722507 R KEGG: asa:ASA_1769 integration host factor beta-subunit; TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; integration host factor subunit beta complement(1722226..1722507) Tolumonas auensis DSM 9187 7885160 YP_002892754.1 CDS rpsA NC_012691.1 1722573 1724243 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1722573..1724243) Tolumonas auensis DSM 9187 7885161 YP_002892755.1 CDS Tola_1558 NC_012691.1 1724348 1725040 R TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: aha:AHA_1808 cytidylate kinase; cytidylate kinase complement(1724348..1725040) Tolumonas auensis DSM 9187 7885162 YP_002892756.1 CDS Tola_1559 NC_012691.1 1725083 1725535 R PFAM: protein of unknown function UPF0153; KEGG: aha:AHA_1932 hypothetical protein; hypothetical protein complement(1725083..1725535) Tolumonas auensis DSM 9187 7885163 YP_002892757.1 CDS Tola_1560 NC_012691.1 1725528 1725815 R KEGG: saz:Sama_1929 hypothetical protein; hypothetical protein complement(1725528..1725815) Tolumonas auensis DSM 9187 7885164 YP_002892758.1 CDS Tola_1561 NC_012691.1 1725915 1726670 D TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: asa:ASA_2167 septum site-determining protein MinC; septum site-determining protein MinC 1725915..1726670 Tolumonas auensis DSM 9187 7885165 YP_002892759.1 CDS Tola_1562 NC_012691.1 1726692 1727504 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aha:AHA_2133 septum site-determining protein MinD; septum site-determining protein MinD 1726692..1727504 Tolumonas auensis DSM 9187 7885166 YP_002892760.1 CDS minE NC_012691.1 1727511 1727810 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1727511..1727810 Tolumonas auensis DSM 9187 7885167 YP_002892761.1 CDS Tola_1564 NC_012691.1 1727840 1728937 R KEGG: swp:swp_2290 ribonuclease D; TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; ribonuclease D complement(1727840..1728937) Tolumonas auensis DSM 9187 7885168 YP_002892762.1 CDS Tola_1565 NC_012691.1 1728956 1729714 R PFAM: protein of unknown function DUF34; KEGG: vvy:VV1026 hypothetical protein; hypothetical protein complement(1728956..1729714) Tolumonas auensis DSM 9187 7885169 YP_002892763.1 CDS Tola_1566 NC_012691.1 1729723 1730700 R PFAM: Sporulation domain protein; KEGG: asa:ASA_2528 DedD protein; sporulation domain-containing protein complement(1729723..1730700) Tolumonas auensis DSM 9187 7885170 YP_002892764.1 CDS Tola_1567 NC_012691.1 1730728 1731984 R KEGG: asa:ASA_2529 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(1730728..1731984) Tolumonas auensis DSM 9187 7885171 YP_002892765.1 CDS Tola_1568 NC_012691.1 1731981 1732847 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: asa:ASA_2530 acetyl-CoA carboxylase, carboxyl transferase beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(1731981..1732847) Tolumonas auensis DSM 9187 7885172 YP_002892766.1 CDS Tola_1569 NC_012691.1 1732969 1733754 R KEGG: aha:AHA_2680 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A complement(1732969..1733754) Tolumonas auensis DSM 9187 7885173 YP_002892767.1 CDS Tola_1570 NC_012691.1 1733843 1735936 R KEGG: asa:ASA_2532 type IV pilus assembly protein TapV; hypothetical protein complement(1733843..1735936) Tolumonas auensis DSM 9187 7885174 YP_002892768.1 CDS Tola_1571 NC_012691.1 1736107 1737069 R PFAM: Semialdehyde dehydrogenase dimerisation region; KEGG: vvu:VV1_1989 aspartate-semialdehyde dehydrogenase; Semialdehyde dehydrogenase dimerisation region complement(1736107..1737069) Tolumonas auensis DSM 9187 7885175 YP_002892769.1 CDS Tola_1572 NC_012691.1 1737092 1738213 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: asa:ASA_2534 erythronate-4-phosphate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region complement(1737092..1738213) Tolumonas auensis DSM 9187 7885176 YP_002892770.1 CDS Tola_1573 NC_012691.1 1738283 1739497 R PFAM: Beta-ketoacyl synthase; KEGG: asa:ASA_2365 3-oxoacyl-[acyl-carrier-protein] synthase I; Beta-ketoacyl synthase complement(1738283..1739497) Tolumonas auensis DSM 9187 7885177 YP_002892771.1 CDS Tola_1574 NC_012691.1 1739617 1741527 D TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase; KEGG: aha:AHA_1919 tRNA (5-aminomethyl-2-thiouridylate) methyltransferase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 1739617..1741527 Tolumonas auensis DSM 9187 7885178 YP_002892772.1 CDS Tola_1575 NC_012691.1 1741682 1742629 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: asa:ASA_1854 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 1741682..1742629 Tolumonas auensis DSM 9187 7885179 YP_002892773.1 CDS Tola_1576 NC_012691.1 1742703 1742942 R KEGG: aha:AHA_1160 hypothetical protein; hypothetical protein complement(1742703..1742942) Tolumonas auensis DSM 9187 7885180 YP_002892774.1 CDS fumC NC_012691.1 1743038 1744444 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1743038..1744444 Tolumonas auensis DSM 9187 7885181 YP_002892775.1 CDS Tola_1578 NC_012691.1 1744495 1745268 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2855 histidine/lysine/arginine/ornithine transporter subunit; ABC transporter complement(1744495..1745268) Tolumonas auensis DSM 9187 7885182 YP_002892776.1 CDS Tola_1579 NC_012691.1 1745293 1746009 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1320 histidine transport system permease protein HisM; polar amino acid ABC transporter inner membrane subunit complement(1745293..1746009) Tolumonas auensis DSM 9187 7885183 YP_002892777.1 CDS Tola_1580 NC_012691.1 1746006 1746692 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3325 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1746006..1746692) Tolumonas auensis DSM 9187 7885184 YP_002892778.1 CDS Tola_1581 NC_012691.1 1746783 1747562 R KEGG: ent:Ent638_2859 cationic amino acid ABC transporter, periplasmic binding protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter substrate-binding protein complement(1746783..1747562) Tolumonas auensis DSM 9187 7885185 YP_002892779.1 CDS Tola_1582 NC_012691.1 1747790 1748341 R PFAM: NUDIX hydrolase; KEGG: sde:Sde_2474 MutT/NUDIX family protein; NUDIX hydrolase complement(1747790..1748341) Tolumonas auensis DSM 9187 7885186 YP_002892780.1 CDS Tola_1583 NC_012691.1 1748417 1748608 D PFAM: protein of unknown function DUF331; KEGG: hap:HAPS_0665 hypothetical protein; hypothetical protein 1748417..1748608 Tolumonas auensis DSM 9187 7885187 YP_002892781.1 CDS Tola_1584 NC_012691.1 1749388 1750491 D KEGG: spl:Spea_2304 hypothetical protein; hypothetical protein 1749388..1750491 Tolumonas auensis DSM 9187 7883478 YP_002892782.1 CDS Tola_1585 NC_012691.1 1750632 1751708 D TIGRFAM: DNA sulfur modification protein DndB; DGQHR domain protein; KEGG: vfm:VFMJ11_A0171 DNA sulfur modification protein DndB; DNA sulfur modification protein DndB 1750632..1751708 Tolumonas auensis DSM 9187 7883479 YP_002892783.1 CDS Tola_1586 NC_012691.1 1751708 1753339 D TIGRFAM: sulfurtransferase DndC; KEGG: vfm:VFMJ11_A0170 putative sulfurtransferase DndC; hypothetical protein 1751708..1753339 Tolumonas auensis DSM 9187 7883480 YP_002892784.1 CDS Tola_1587 NC_012691.1 1753349 1755364 D TIGRFAM: DNA sulfur modification protein DndD; KEGG: vfm:VFMJ11_A0169 DNA sulfur modification protein DndD; DNA sulfur modification protein DndD 1753349..1755364 Tolumonas auensis DSM 9187 7883481 YP_002892785.1 CDS Tola_1588 NC_012691.1 1755364 1755711 D TIGRFAM: DNA sulfur modification protein DndE; PFAM: Domain of unknown function DUF1832; KEGG: vfm:VFMJ11_A0168 DNA sulfur modification protein DndE; DNA sulfur modification protein DndE 1755364..1755711 Tolumonas auensis DSM 9187 7883482 YP_002892786.1 CDS Tola_1589 NC_012691.1 1755818 1757896 R PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rde:RD1_0805 helicase conserved C-terminal domain, putative; type III restriction protein res subunit complement(1755818..1757896) Tolumonas auensis DSM 9187 7883483 YP_002892787.1 CDS Tola_1590 NC_012691.1 1757886 1760627 R PFAM: sigma-70 region 4 domain protein; KEGG: rde:RD1_0804 RNA polymerase sigma factor, putative; sigma-70 region 4 domain-containing protein complement(1757886..1760627) Tolumonas auensis DSM 9187 7883484 YP_002892788.1 CDS Tola_1591 NC_012691.1 1760636 1761073 R KEGG: rde:RD1_0807 hypothetical protein; hypothetical protein complement(1760636..1761073) Tolumonas auensis DSM 9187 7883485 YP_002892789.1 CDS Tola_1592 NC_012691.1 1761063 1763105 R PFAM: SMC domain protein; KEGG: rde:RD1_0806 hypothetical protein; SMC domain-containing protein complement(1761063..1763105) Tolumonas auensis DSM 9187 7883486 YP_002892790.1 CDS Tola_1593 NC_012691.1 1763102 1763269 R hypothetical protein complement(1763102..1763269) Tolumonas auensis DSM 9187 7883487 YP_002892791.1 CDS Tola_1594 NC_012691.1 1763312 1764040 R KEGG: vfm:VFMJ11_A0163 dnd system-associated protein 3; hypothetical protein complement(1763312..1764040) Tolumonas auensis DSM 9187 7883488 YP_002892792.1 CDS Tola_1595 NC_012691.1 1764284 1764787 R PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: vco:VC0395_A0338 tellurite resistance protein-related protein; type 12 methyltransferase complement(1764284..1764787) Tolumonas auensis DSM 9187 7883489 YP_002892793.1 CDS Tola_1596 NC_012691.1 1764937 1765197 R KEGG: shn:Shewana3_2024 hypothetical protein; XRE family transcriptional regulator complement(1764937..1765197) Tolumonas auensis DSM 9187 7883490 YP_002892794.1 CDS Tola_1597 NC_012691.1 1765315 1765551 D KEGG: sbp:Sbal223_2135 hypothetical protein; hypothetical protein 1765315..1765551 Tolumonas auensis DSM 9187 7883491 YP_002892795.1 CDS Tola_1598 NC_012691.1 1765544 1766725 D PFAM: integrase family protein; KEGG: shn:Shewana3_2022 phage integrase family protein; integrase family protein 1765544..1766725 Tolumonas auensis DSM 9187 7883492 YP_002892796.1 CDS Tola_1599 NC_012691.1 1766736 1767593 D TIGRFAM: metal dependent phophohydrolase; KEGG: shn:Shewana3_2021 metal dependent phosphohydrolase; metal dependent phophohydrolase 1766736..1767593 Tolumonas auensis DSM 9187 7883493 YP_002892797.1 CDS Tola_1600 NC_012691.1 1767593 1767820 D hypothetical protein 1767593..1767820 Tolumonas auensis DSM 9187 7883494 YP_002892798.1 CDS Tola_1601 NC_012691.1 1767843 1769084 R KEGG: scl:sce6902 polyA polymerase related protein; poly A polymerase-like protein complement(1767843..1769084) Tolumonas auensis DSM 9187 7883495 YP_002892799.1 CDS Tola_1602 NC_012691.1 1769572 1770498 D hypothetical protein 1769572..1770498 Tolumonas auensis DSM 9187 7883496 YP_002892800.1 CDS Tola_1603 NC_012691.1 1770721 1771299 D hypothetical protein 1770721..1771299 Tolumonas auensis DSM 9187 7883497 YP_002892801.1 CDS Tola_1604 NC_012691.1 1771545 1772177 R hypothetical protein complement(1771545..1772177) Tolumonas auensis DSM 9187 7883498 YP_002892802.1 CDS Tola_1605 NC_012691.1 1772214 1773167 R hypothetical protein complement(1772214..1773167) Tolumonas auensis DSM 9187 7883499 YP_002892803.1 CDS Tola_1606 NC_012691.1 1773360 1774901 D PFAM: Integrase catalytic region; KEGG: shn:Shewana3_1250 integrase catalytic subunit; integrase catalytic subunit 1773360..1774901 Tolumonas auensis DSM 9187 7883500 YP_002892804.1 CDS Tola_1607 NC_012691.1 1774913 1775668 D PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: maq:Maqu_4137 IstB ATP binding domain-containing protein; IstB domain-containing protein ATP-binding protein 1774913..1775668 Tolumonas auensis DSM 9187 7883501 YP_002892805.1 CDS Tola_1608 NC_012691.1 1776036 1776308 D KEGG: psb:Psyr_5113 hypothetical protein; hypothetical protein 1776036..1776308 Tolumonas auensis DSM 9187 7883502 YP_002892806.1 CDS Tola_1609 NC_012691.1 1776646 1778403 R PFAM: UvrD/REP helicase; KEGG: vfm:VFMJ11_1067 UvrD/REP helicase, putative; UvrD/REP helicase complement(1776646..1778403) Tolumonas auensis DSM 9187 7883503 YP_002892807.1 CDS Tola_1610 NC_012691.1 1778403 1780355 R KEGG: vfm:VFMJ11_1066 RecF/RecN/SMC N domain protein; RecF/RecN/SMC N domain-containing protein complement(1778403..1780355) Tolumonas auensis DSM 9187 7883504 YP_002892808.1 CDS Tola_1611 NC_012691.1 1780853 1782058 R KEGG: ppr:PBPRA1708 hypothetical protein; hypothetical protein complement(1780853..1782058) Tolumonas auensis DSM 9187 7883505 YP_002892809.1 CDS Tola_1612 NC_012691.1 1782293 1785349 R KEGG: sbp:Sbal223_2131 phage integrase family protein; phage integrase family protein complement(1782293..1785349) Tolumonas auensis DSM 9187 7883506 YP_002892810.1 CDS Tola_1613 NC_012691.1 1785370 1787916 R KEGG: shn:Shewana3_2019 hypothetical protein; hypothetical protein complement(1785370..1787916) Tolumonas auensis DSM 9187 7883507 YP_002892811.1 CDS Tola_1614 NC_012691.1 1787909 1788505 R KEGG: shn:Shewana3_2018 hypothetical protein; hypothetical protein complement(1787909..1788505) Tolumonas auensis DSM 9187 7883508 YP_002892812.1 CDS Tola_1615 NC_012691.1 1788807 1789430 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: pen:PSEEN2100 urease accessory protein UreG; urease accessory protein UreG complement(1788807..1789430) Tolumonas auensis DSM 9187 7883509 YP_002892813.1 CDS Tola_1616 NC_012691.1 1789453 1790148 R PFAM: Urease accessory protein UreF; KEGG: pen:PSEEN2099 urease accessory protein UreF; Urease accessory protein UreF complement(1789453..1790148) Tolumonas auensis DSM 9187 7883510 YP_002892814.1 CDS Tola_1617 NC_012691.1 1790152 1790706 R PFAM: HupE/UreJ protein; KEGG: pen:PSEEN2098 urease accessory protein UreJ; HupE/UreJ protein complement(1790152..1790706) Tolumonas auensis DSM 9187 7883511 YP_002892815.1 CDS Tola_1618 NC_012691.1 1790738 1791304 R PFAM: UreE urease accessory domain protein; KEGG: abo:ABO_2718 urease accessory protein UreE; UreE urease accessory domain-containing protein complement(1790738..1791304) Tolumonas auensis DSM 9187 7883512 YP_002892816.1 CDS ureC NC_012691.1 1791314 1793017 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1791314..1793017) Tolumonas auensis DSM 9187 7883513 YP_002892817.1 CDS Tola_1620 NC_012691.1 1793014 1793373 R KEGG: pen:PSEEN2095 urease subunit beta; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta complement(1793014..1793373) Tolumonas auensis DSM 9187 7883514 YP_002892818.1 CDS Tola_1621 NC_012691.1 1793383 1793685 R KEGG: rfr:Rfer_3399 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; urease subunit gamma complement(1793383..1793685) Tolumonas auensis DSM 9187 7883515 YP_002892819.1 CDS Tola_1622 NC_012691.1 1793709 1794551 R PFAM: Urease accessory protein UreD; KEGG: ppg:PputGB1_2938 urease accessory protein UreD; Urease accessory protein UreD complement(1793709..1794551) Tolumonas auensis DSM 9187 7883516 YP_002892820.1 CDS Tola_1623 NC_012691.1 1794548 1795243 R KEGG: maq:Maqu_2997 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(1794548..1795243) Tolumonas auensis DSM 9187 7883517 YP_002892821.1 CDS Tola_1624 NC_012691.1 1795237 1796076 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: maq:Maqu_2998 ABC transporter related; urea ABC transporter ATP-binding protein UrtD complement(1795237..1796076) Tolumonas auensis DSM 9187 7883518 YP_002892822.1 CDS Tola_1625 NC_012691.1 1796076 1797158 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: abo:ABO_2511 branched-chain amino acid ABC transporter, permease protein; urea ABC transporter, permease protein UrtC complement(1796076..1797158) Tolumonas auensis DSM 9187 7883519 YP_002892823.1 CDS Tola_1626 NC_012691.1 1797163 1798764 R TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: cja:CJA_1240 branched-chain amino acid transport system / permease component domain protein; urea ABC transporter, permease protein UrtB complement(1797163..1798764) Tolumonas auensis DSM 9187 7883520 YP_002892824.1 CDS Tola_1627 NC_012691.1 1798864 1800132 R TIGRFAM: urea ABC transporter, urea binding protein; KEGG: UreA or short-chain amide ABC transporter ; K01999 branched-chain amino acid transport system substrate-binding protein; urea ABC transporter, urea binding protein complement(1798864..1800132) Tolumonas auensis DSM 9187 7883521 YP_002892825.1 CDS Tola_1628 NC_012691.1 1800393 1803788 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pin:Ping_2985 fused histidine kinase sensor/response regulator; histidine kinase 1800393..1803788 Tolumonas auensis DSM 9187 7883522 YP_002892826.1 CDS Tola_1629 NC_012691.1 1803775 1804671 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: amc:MADE_00878 two-component response regulator; two component transcriptional regulator, LuxR family 1803775..1804671 Tolumonas auensis DSM 9187 7883523 YP_002892827.1 CDS Tola_1630 NC_012691.1 1804777 1805253 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bcm:Bcenmc03_6796 AsnC family transcriptional regulator; transcriptional regulator, AsnC family complement(1804777..1805253) Tolumonas auensis DSM 9187 7883524 YP_002892828.1 CDS Tola_1631 NC_012691.1 1805507 1806307 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nocP1; ABC transporter nucleotide binding/ATPase protein; ABC transporter 1805507..1806307 Tolumonas auensis DSM 9187 7883525 YP_002892829.1 CDS Tola_1632 NC_012691.1 1806338 1807108 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ABC transporter substrate binding protein (amino acid) ; K10013 lysine/arginine/ornithine transport system substrate-binding protein; family 3 extracellular solute-binding protein 1806338..1807108 Tolumonas auensis DSM 9187 7883526 YP_002892830.1 CDS Tola_1633 NC_012691.1 1807111 1807830 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4293 histidine transport system permease protein; polar amino acid ABC transporter inner membrane subunit 1807111..1807830 Tolumonas auensis DSM 9187 7883527 YP_002892831.1 CDS Tola_1634 NC_012691.1 1807842 1808531 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4292 putative transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 1807842..1808531 Tolumonas auensis DSM 9187 7883528 YP_002892832.1 CDS Tola_1635 NC_012691.1 1808549 1809760 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sil:SPO0413 Cys/Met metabolism PLP-dependent enzyme family protein; cystathionine gamma-lyase 1808549..1809760 Tolumonas auensis DSM 9187 7883529 YP_002892833.1 CDS Tola_1636 NC_012691.1 1809757 1810692 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A0215 hypothetical protein; hypothetical protein 1809757..1810692 Tolumonas auensis DSM 9187 7883530 YP_002892834.1 CDS Tola_1637 NC_012691.1 1811152 1812090 R PFAM: UspA domain protein; KEGG: lpc:LPC_2097 hypothetical protein; UspA domain-containing protein complement(1811152..1812090) Tolumonas auensis DSM 9187 7883531 YP_002892835.1 CDS Tola_1639 NC_012691.1 1812417 1813532 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: smt:Smal_0015 radical SAM domain protein; radical SAM protein complement(1812417..1813532) Tolumonas auensis DSM 9187 7883533 YP_002892836.1 CDS Tola_1640 NC_012691.1 1813539 1814441 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator protein; LysR family transcriptional regulator complement(1813539..1814441) Tolumonas auensis DSM 9187 7883534 YP_002892837.1 CDS Tola_1641 NC_012691.1 1814691 1815317 D PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: npdG; NADPH-dependent F420 reductase ; K06988; coenzyme F420-dependent NADP oxidoreductase 1814691..1815317 Tolumonas auensis DSM 9187 7883535 YP_002892838.1 CDS Tola_1642 NC_012691.1 1815499 1816458 R KEGG: azc:AZC_2054 glutathione S-transferase; glutathione transferase complement(1815499..1816458) Tolumonas auensis DSM 9187 7883536 YP_002892839.1 CDS Tola_1643 NC_012691.1 1816470 1816877 R PFAM: DoxX family protein; KEGG: hypothetical protein; DoxX family protein complement(1816470..1816877) Tolumonas auensis DSM 9187 7883537 YP_002892840.1 CDS Tola_1644 NC_012691.1 1816986 1817897 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: transcriptional regulator; LysR family transcriptional regulator complement(1816986..1817897) Tolumonas auensis DSM 9187 7883538 YP_002892841.1 CDS Tola_1645 NC_012691.1 1817974 1818606 R KEGG: pde:Pden_0210 hypothetical protein; hypothetical protein complement(1817974..1818606) Tolumonas auensis DSM 9187 7883539 YP_002892842.1 CDS Tola_1646 NC_012691.1 1818851 1819771 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3131 LysR family transcriptional regulator; LysR family transcriptional regulator 1818851..1819771 Tolumonas auensis DSM 9187 7883540 YP_002892843.1 CDS Tola_1647 NC_012691.1 1819900 1820100 D PFAM: 4-oxalocrotonate tautomerase; KEGG: pde:Pden_0208 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1819900..1820100 Tolumonas auensis DSM 9187 7883541 YP_002892844.1 CDS Tola_1648 NC_012691.1 1820126 1820419 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pfl:PFL_0716 antibiotic biosynthesis monooxygenase domain-containing protein; antibiotic biosynthesis monooxygenase 1820126..1820419 Tolumonas auensis DSM 9187 7883542 YP_002892845.1 CDS Tola_1649 NC_012691.1 1820502 1822133 R PFAM: Carboxylesterase type B; KEGG: sus:Acid_2106 carboxylesterase, type B; Carboxylesterase complement(1820502..1822133) Tolumonas auensis DSM 9187 7883543 YP_002892846.1 CDS Tola_1650 NC_012691.1 1822425 1823414 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: sus:Acid_7076 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1822425..1823414 Tolumonas auensis DSM 9187 7883544 YP_002892847.1 CDS Tola_1651 NC_012691.1 1823411 1824424 D KEGG: bcy:Bcer98_2410 6-phosphogluconolactonase; 3-carboxymuconate cyclase-like protein 1823411..1824424 Tolumonas auensis DSM 9187 7883545 YP_002892848.1 CDS Tola_1652 NC_012691.1 1824439 1825212 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bsu:BSU36300 DeoR family transcriptional regulator; Cro/CI family transcriptional regulator complement(1824439..1825212) Tolumonas auensis DSM 9187 7883546 YP_002892849.1 CDS Tola_1653 NC_012691.1 1825508 1826485 D PFAM: oxidoreductase domain protein; KEGG: bha:BH2703 hypothetical protein; oxidoreductase domain-containing protein 1825508..1826485 Tolumonas auensis DSM 9187 7883547 YP_002892850.1 CDS Tola_1654 NC_012691.1 1826595 1827047 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: plu:plu4153 hypothetical protein; transcriptional regulator, AsnC family complement(1826595..1827047) Tolumonas auensis DSM 9187 7883548 YP_002892851.1 CDS Tola_1655 NC_012691.1 1827189 1827803 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_3513 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 1827189..1827803 Tolumonas auensis DSM 9187 7883549 YP_002892852.1 CDS Tola_1656 NC_012691.1 1827818 1828507 R hypothetical protein complement(1827818..1828507) Tolumonas auensis DSM 9187 7883550 YP_002892853.1 CDS Tola_1657 NC_012691.1 1828579 1829403 R TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: pna:Pnap_2039 ModD protein; modD protein complement(1828579..1829403) Tolumonas auensis DSM 9187 7883551 YP_002892854.1 CDS Tola_1658 NC_012691.1 1829465 1830325 R PFAM: beta-lactamase domain protein; KEGG: dps:DP2748 hypothetical protein; beta-lactamase domain-containing protein complement(1829465..1830325) Tolumonas auensis DSM 9187 7883552 YP_002892855.1 CDS Tola_1659 NC_012691.1 1830309 1830752 R PFAM: thioesterase superfamily protein; KEGG: sbn:Sbal195_1431 thioesterase superfamily protein; thioesterase superfamily protein complement(1830309..1830752) Tolumonas auensis DSM 9187 7883553 YP_002892856.1 CDS Tola_1660 NC_012691.1 1830855 1831394 R KEGG: sfr:Sfri_1975 hypothetical protein; hypothetical protein complement(1830855..1831394) Tolumonas auensis DSM 9187 7883554 YP_002892857.1 CDS Tola_1661 NC_012691.1 1831631 1831912 R PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; hypothetical protein complement(1831631..1831912) Tolumonas auensis DSM 9187 7883555 YP_002892858.1 CDS cobT NC_012691.1 1832093 1833148 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(1832093..1833148) Tolumonas auensis DSM 9187 7883556 YP_002892859.1 CDS cobS NC_012691.1 1833193 1833933 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(1833193..1833933) Tolumonas auensis DSM 9187 7883557 YP_002892860.1 CDS Tola_1664 NC_012691.1 1833943 1834491 R PFAM: cobalbumin biosynthesis protein; KEGG: yen:YE2710 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase complement(1833943..1834491) Tolumonas auensis DSM 9187 7883558 YP_002892861.1 CDS Tola_1665 NC_012691.1 1834488 1836044 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(1834488..1836044) Tolumonas auensis DSM 9187 7886243 YP_002892862.1 CDS Tola_1666 NC_012691.1 1836041 1836865 R KEGG: yen:YE2712 putative cobalt transport ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(1836041..1836865) Tolumonas auensis DSM 9187 7886325 YP_002892863.1 CDS Tola_1667 NC_012691.1 1836862 1837539 R TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: yen:YE2713 putative cobalt transport protein; cobalt ABC transporter permease complement(1836862..1837539) Tolumonas auensis DSM 9187 7886326 YP_002892864.1 CDS Tola_1668 NC_012691.1 1837523 1837807 R periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN complement(1837523..1837807) Tolumonas auensis DSM 9187 7886327 YP_002892865.1 CDS Tola_1669 NC_012691.1 1837809 1838528 R catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM complement(1837809..1838528) Tolumonas auensis DSM 9187 7886328 YP_002892866.1 CDS Tola_1670 NC_012691.1 1838555 1839280 R catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase complement(1838555..1839280) Tolumonas auensis DSM 9187 7886329 YP_002892867.1 CDS Tola_1671 NC_012691.1 1839280 1840071 R PFAM: anaerobic cobalt chelatase; KEGG: plu:plu2989 cobalt chelatase; Sirohydrochlorin cobaltochelatase complement(1839280..1840071) Tolumonas auensis DSM 9187 7886330 YP_002892868.1 CDS Tola_1672 NC_012691.1 1840068 1840865 R CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase complement(1840068..1840865) Tolumonas auensis DSM 9187 7886331 YP_002892869.1 CDS Tola_1673 NC_012691.1 1840865 1841590 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: see:SNSL254_A2203 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase complement(1840865..1841590) Tolumonas auensis DSM 9187 7886332 YP_002892870.1 CDS Tola_1674 NC_012691.1 1841590 1842666 R catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG complement(1841590..1842666) Tolumonas auensis DSM 9187 7886333 YP_002892871.1 CDS Tola_1675 NC_012691.1 1842647 1843420 R KEGG: yen:YE2719a precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase complement(1842647..1843420) Tolumonas auensis DSM 9187 7886334 YP_002892872.1 CDS Tola_1676 NC_012691.1 1843404 1843982 R catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase complement(1843404..1843982) Tolumonas auensis DSM 9187 7886335 YP_002892873.1 CDS Tola_1677 NC_012691.1 1843969 1844574 R catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase complement(1843969..1844574) Tolumonas auensis DSM 9187 7886336 YP_002892874.1 CDS cbiD NC_012691.1 1844571 1845707 R Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase complement(1844571..1845707) Tolumonas auensis DSM 9187 7886337 YP_002892875.1 CDS cbiC NC_012691.1 1845704 1846348 R catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase complement(1845704..1846348) Tolumonas auensis DSM 9187 7886338 YP_002892876.1 CDS cobD NC_012691.1 1846352 1847311 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(1846352..1847311) Tolumonas auensis DSM 9187 7886339 YP_002892877.1 CDS Tola_1681 NC_012691.1 1847308 1848681 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(1847308..1848681) Tolumonas auensis DSM 9187 7886340 YP_002892878.1 CDS Tola_1682 NC_012691.1 1849303 1850202 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2726 pdu and cob operons regulatory protein; AraC family transcriptional regulator complement(1849303..1850202) Tolumonas auensis DSM 9187 7886341 YP_002892879.1 CDS Tola_1683 NC_012691.1 1850431 1851264 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: yen:YE2727 propanediol diffusion facilitator; MIP family channel protein complement(1850431..1851264) Tolumonas auensis DSM 9187 7886342 YP_002892880.1 CDS Tola_1684 NC_012691.1 1851889 1852173 D PFAM: microcompartments protein; KEGG: stm:STM2038 polyhedral body protein; microcompartments protein 1851889..1852173 Tolumonas auensis DSM 9187 7886343 YP_002892881.1 CDS Tola_1685 NC_012691.1 1852170 1852976 D PFAM: microcompartments protein; KEGG: yen:YE2729 putative propanediol utilization protein; microcompartments protein 1852170..1852976 Tolumonas auensis DSM 9187 7886344 YP_002892882.1 CDS Tola_1686 NC_012691.1 1852998 1854662 D PFAM: dehydratase large subunit; KEGG: sea:SeAg_B2163 propanediol utilization dehydratase, large subunit; glycerol dehydratase 1852998..1854662 Tolumonas auensis DSM 9187 7886345 YP_002892883.1 CDS Tola_1687 NC_012691.1 1854675 1855334 D PFAM: dehydratase medium subunit; KEGG: efe:EFER_2011 propanediol utilization: diol dehydratase, medium subunit; dehydratase medium subunit 1854675..1855334 Tolumonas auensis DSM 9187 7886346 YP_002892884.1 CDS Tola_1688 NC_012691.1 1855349 1855867 D PFAM: dehydratase small subunit; KEGG: eum:ECUMN_2338 propanediol utilization diol dehydratase, small subunit; dehydratase small subunit 1855349..1855867 Tolumonas auensis DSM 9187 7886347 YP_002892885.1 CDS Tola_1689 NC_012691.1 1856028 1857854 D PFAM: Diol/glycerol dehydratase reactivating factor large subunit; KEGG: yen:YE2733 putative propanediol utilization protein: diol dehydratase reactivation; diol/glycerol dehydratase reactivating factor large subunit 1856028..1857854 Tolumonas auensis DSM 9187 7886348 YP_002892886.1 CDS Tola_1690 NC_012691.1 1857851 1858207 D KEGG: ssn:SSON_2064 putative propanediol utilization protein: diol dehydratase reactivation; putative propanediol utilization diol dehydratase reactivation protein 1857851..1858207 Tolumonas auensis DSM 9187 7886349 YP_002892887.1 CDS Tola_1691 NC_012691.1 1858245 1858520 D PFAM: microcompartments protein; KEGG: cko:CKO_00791 hypothetical protein; microcompartments protein 1858245..1858520 Tolumonas auensis DSM 9187 7886350 YP_002892888.1 CDS Tola_1692 NC_012691.1 1858554 1859060 D PFAM: microcompartments protein; KEGG: set:SEN2044 propanediol utilization protein; microcompartments protein 1858554..1859060 Tolumonas auensis DSM 9187 7886351 YP_002892889.1 CDS Tola_1693 NC_012691.1 1859057 1859689 D PFAM: Propanediol utilization protein; KEGG: yen:YE2737 putative propanediol utilization protein; propanediol utilization protein 1859057..1859689 Tolumonas auensis DSM 9187 7886352 YP_002892890.1 CDS Tola_1694 NC_012691.1 1859693 1860193 D KEGG: yen:YE2738 putative propanediol utilization protein; putative propanediol utilization protein 1859693..1860193 Tolumonas auensis DSM 9187 7886353 YP_002892891.1 CDS Tola_1695 NC_012691.1 1860197 1860484 D PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: spc:Sputcn32_0201 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 1860197..1860484 Tolumonas auensis DSM 9187 7886354 YP_002892892.1 CDS Tola_1696 NC_012691.1 1860495 1861538 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; protein of unknown function DUF336; KEGG: yen:YE2740 putative propanediol utilization protein: B12 related; ATP/cobalamin adenosyltransferase 1860495..1861538 Tolumonas auensis DSM 9187 7886355 YP_002892893.1 CDS Tola_1697 NC_012691.1 1861535 1862938 D PFAM: Aldehyde Dehydrogenase; KEGG: yen:YE2741 putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase; Aldehyde Dehydrogenase 1861535..1862938 Tolumonas auensis DSM 9187 7886356 YP_002892894.1 CDS Tola_1698 NC_012691.1 1862960 1864075 D PFAM: iron-containing alcohol dehydrogenase; KEGG: yen:YE2742 putative propanediol utilization protein: propanol dehydrogenase; iron-containing alcohol dehydrogenase 1862960..1864075 Tolumonas auensis DSM 9187 7886357 YP_002892895.1 CDS Tola_1699 NC_012691.1 1864072 1865451 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: yen:YE2743 putative NADH dehydrogenase; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1864072..1865451 Tolumonas auensis DSM 9187 7886358 YP_002892896.1 CDS Tola_1700 NC_012691.1 1865455 1866003 D PFAM: microcompartments protein; KEGG: yen:YE2744 putative propanediol utilization protein: polyhedral bodies; microcompartments protein 1865455..1866003 Tolumonas auensis DSM 9187 7886359 YP_002892897.1 CDS Tola_1701 NC_012691.1 1866022 1866375 D PFAM: microcompartments protein; KEGG: yen:YE2745 putative propanediol utilization protein; microcompartments protein 1866022..1866375 Tolumonas auensis DSM 9187 7886360 YP_002892898.1 CDS Tola_1702 NC_012691.1 1866378 1866809 D TIGRFAM: ethanolamine utilization protein, EutP; KEGG: yen:YE2746 hypothetical protein; ethanolamine utilization protein, EutP 1866378..1866809 Tolumonas auensis DSM 9187 7886361 YP_002892899.1 CDS Tola_1703 NC_012691.1 1866831 1868009 D involved in coenzyme B(12)-dependent 1, 2-propanediol degradation; important for the synthesis of propionyl coenzyme A during growth on 1,2-propanediol; propionate kinase 1866831..1868009 Tolumonas auensis DSM 9187 7886362 YP_002892900.1 CDS Tola_1704 NC_012691.1 1868013 1868795 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE2748 putative uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1868013..1868795 Tolumonas auensis DSM 9187 7886363 YP_002892901.1 CDS Tola_1705 NC_012691.1 1868829 1869908 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1868829..1869908 Tolumonas auensis DSM 9187 7886364 YP_002892902.1 CDS Tola_1706 NC_012691.1 1869901 1870761 D PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: plu:plu2966 hypothetical protein; GHMP kinase 1869901..1870761 Tolumonas auensis DSM 9187 7886365 YP_002892903.1 CDS Tola_1707 NC_012691.1 1870763 1871722 R PFAM: glycoside hydrolase family 43; KEGG: spc:Sputcn32_2053 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase complement(1870763..1871722) Tolumonas auensis DSM 9187 7886366 YP_002892904.1 CDS Tola_1708 NC_012691.1 1871889 1872887 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vpa:VP2396 LacI-family regulatory protein; transcriptional regulator, LacI family complement(1871889..1872887) Tolumonas auensis DSM 9187 7886367 YP_002892905.1 CDS Tola_1709 NC_012691.1 1872962 1874275 R PFAM: extracellular solute-binding protein family 1; KEGG: sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein complement(1872962..1874275) Tolumonas auensis DSM 9187 7886368 YP_002892906.1 CDS Tola_1710 NC_012691.1 1874373 1875278 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2715 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1874373..1875278) Tolumonas auensis DSM 9187 7886369 YP_002892907.1 CDS Tola_1711 NC_012691.1 1875278 1876159 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2714 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1875278..1876159) Tolumonas auensis DSM 9187 7886370 YP_002892908.1 CDS Tola_1712 NC_012691.1 1876159 1877256 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2713 ABC transporter related; ABC transporter complement(1876159..1877256) Tolumonas auensis DSM 9187 7886371 YP_002892909.1 CDS Tola_1713 NC_012691.1 1877262 1878773 R PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: mmw:Mmwyl1_2712 alpha-N-arabinofuranosidase; alpha-L-arabinofuranosidase complement(1877262..1878773) Tolumonas auensis DSM 9187 7886372 YP_002892910.1 CDS Tola_1714 NC_012691.1 1879125 1881638 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: aha:AHA_2689 beta-glucosidase; glycoside hydrolase family 3 complement(1879125..1881638) Tolumonas auensis DSM 9187 7886373 YP_002892911.1 CDS Tola_1715 NC_012691.1 1881929 1882945 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aha:AHA_2690 transcriptional regulator, AraC family protein; AraC family transcriptional regulator complement(1881929..1882945) Tolumonas auensis DSM 9187 7886374 YP_002892912.1 CDS Tola_1716 NC_012691.1 1883342 1883761 R KEGG: mes:Meso_1245 hypothetical protein; hypothetical protein complement(1883342..1883761) Tolumonas auensis DSM 9187 7886375 YP_002892913.1 CDS Tola_1717 NC_012691.1 1884076 1884597 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1884076..1884597 Tolumonas auensis DSM 9187 7886376 YP_002892914.1 CDS Tola_1718 NC_012691.1 1884590 1885591 D PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: vco:VC0395_1103 MoxR-related protein; ATPase 1884590..1885591 Tolumonas auensis DSM 9187 7886377 YP_002892915.1 CDS Tola_1719 NC_012691.1 1885588 1886466 D PFAM: protein of unknown function DUF58; KEGG: vsp:VS_II0214 hypothetical protein; hypothetical protein 1885588..1886466 Tolumonas auensis DSM 9187 7886378 YP_002892916.1 CDS Tola_1720 NC_012691.1 1886467 1886931 D KEGG: ppr:PBPRB1844 hypothetical protein; hypothetical protein 1886467..1886931 Tolumonas auensis DSM 9187 7886379 YP_002892917.1 CDS Tola_1721 NC_012691.1 1886928 1887878 D PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: sbp:Sbal223_1593 von Willebrand factor type A; von Willebrand factor type A 1886928..1887878 Tolumonas auensis DSM 9187 7886380 YP_002892918.1 CDS Tola_1722 NC_012691.1 1887871 1889319 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: vpa:VPA1455 hypothetical protein; hypothetical protein 1887871..1889319 Tolumonas auensis DSM 9187 7886381 YP_002892919.1 CDS Tola_1723 NC_012691.1 1889323 1890924 D KEGG: mca:MCA3087 hypothetical protein; hypothetical protein 1889323..1890924 Tolumonas auensis DSM 9187 7886382 YP_002892920.1 CDS Tola_1724 NC_012691.1 1890995 1891315 R KEGG: amc:MADE_02444 integration host factor alpha subunit; TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha complement(1890995..1891315) Tolumonas auensis DSM 9187 7886383 YP_002892921.1 CDS Tola_1725 NC_012691.1 1891318 1893708 R TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: asa:ASA_1958 phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(1891318..1893708) Tolumonas auensis DSM 9187 7886384 YP_002892922.1 CDS pheS NC_012691.1 1893721 1894704 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1893721..1894704) Tolumonas auensis DSM 9187 7886385 YP_002892923.1 CDS rplT NC_012691.1 1894986 1895342 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1894986..1895342) Tolumonas auensis DSM 9187 7886386 YP_002892924.1 CDS Tola_1728 NC_012691.1 1895358 1895555 R TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: spe:Spro_2146 50S ribosomal protein L35; 50S ribosomal protein L35 complement(1895358..1895555) Tolumonas auensis DSM 9187 7886387 YP_002892925.1 CDS Tola_1729 NC_012691.1 1895648 1896187 R TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: asa:ASA_1954 translation initiation factor IF-3; translation initiation factor IF-3 complement(1895648..1896187) Tolumonas auensis DSM 9187 7886388 YP_002892926.1 CDS thrS NC_012691.1 1896191 1898119 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1896191..1898119) Tolumonas auensis DSM 9187 7886389 YP_002892927.1 CDS Tola_1731 NC_012691.1 1898317 1898604 R PFAM: ribosomal protein L25; KEGG: asa:ASA_2080 ribosomal protein L25; 50S ribosomal protein L25 complement(1898317..1898604) Tolumonas auensis DSM 9187 7886390 YP_002892928.1 CDS Tola_1732 NC_012691.1 1898718 1899095 R PFAM: diacylglycerol kinase; KEGG: asa:ASA_1640 diacylglycerol kinase; diacylglycerol kinase complement(1898718..1899095) Tolumonas auensis DSM 9187 7886391 YP_002892929.1 CDS Tola_1733 NC_012691.1 1899092 1899880 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_1638 vitamin B12 import ATP-binding protein BtuD; ABC transporter complement(1899092..1899880) Tolumonas auensis DSM 9187 7886392 YP_002892930.1 CDS Tola_1734 NC_012691.1 1899864 1900880 R with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease complement(1899864..1900880) Tolumonas auensis DSM 9187 7886393 YP_002892931.1 CDS hisG NC_012691.1 1901372 1902268 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1901372..1902268 Tolumonas auensis DSM 9187 7886394 YP_002892932.1 CDS Tola_1736 NC_012691.1 1902281 1903582 D KEGG: vsp:VS_2025 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase; histidinol dehydrogenase 1902281..1903582 Tolumonas auensis DSM 9187 7886395 YP_002892933.1 CDS Tola_1737 NC_012691.1 1903582 1904658 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1903582..1904658 Tolumonas auensis DSM 9187 7886396 YP_002892934.1 CDS Tola_1738 NC_012691.1 1904672 1905745 D catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1904672..1905745 Tolumonas auensis DSM 9187 7886397 YP_002892935.1 CDS hisH NC_012691.1 1905756 1906358 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1905756..1906358 Tolumonas auensis DSM 9187 7886398 YP_002892936.1 CDS Tola_1740 NC_012691.1 1906358 1907095 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1906358..1907095 Tolumonas auensis DSM 9187 7886399 YP_002892937.1 CDS Tola_1741 NC_012691.1 1907077 1907850 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1907077..1907850 Tolumonas auensis DSM 9187 7886400 YP_002892938.1 CDS Tola_1742 NC_012691.1 1907843 1908463 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 1907843..1908463 Tolumonas auensis DSM 9187 7886401 YP_002892939.1 CDS Tola_1743 NC_012691.1 1908590 1909834 D KEGG: asa:ASA_2441 two-component response transcriptional regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 1908590..1909834 Tolumonas auensis DSM 9187 7886402 YP_002892940.1 CDS Tola_1744 NC_012691.1 1910247 1910750 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pfo:Pfl01_3645 MarR family transcriptional regulator; transcriptional regulator, MarR family 1910247..1910750 Tolumonas auensis DSM 9187 7886403 YP_002892941.1 CDS Tola_1745 NC_012691.1 1910754 1912205 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pfo:Pfl01_3644 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 1910754..1912205 Tolumonas auensis DSM 9187 7886404 YP_002892942.1 CDS Tola_1746 NC_012691.1 1912224 1913414 D PFAM: secretion protein HlyD family protein; KEGG: pae:PA5159 multidrug resistance protein; secretion protein HlyD family protein 1912224..1913414 Tolumonas auensis DSM 9187 7886405 YP_002892943.1 CDS Tola_1747 NC_012691.1 1913427 1914944 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_1731 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 1913427..1914944 Tolumonas auensis DSM 9187 7886406 YP_002892944.1 CDS Tola_1748 NC_012691.1 1914946 1915377 R KEGG: bpy:Bphyt_0028 transcriptional regulator, MerR family; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator, MerR family complement(1914946..1915377) Tolumonas auensis DSM 9187 7886407 YP_002892945.1 CDS Tola_1749 NC_012691.1 1915478 1917682 D TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A4439 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 1915478..1917682 Tolumonas auensis DSM 9187 7886408 YP_002892946.1 CDS Tola_1750 NC_012691.1 1917819 1918754 D PFAM: Lactate/malate dehydrogenase; KEGG: aba:Acid345_1483 malate dehydrogenase (NAD); lactate/malate dehydrogenase 1917819..1918754 Tolumonas auensis DSM 9187 7886409 YP_002892947.1 CDS Tola_1751 NC_012691.1 1918826 1919239 D PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_0968 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1918826..1919239 Tolumonas auensis DSM 9187 7886410 YP_002892948.1 CDS Tola_1752 NC_012691.1 1919411 1919962 R PFAM: protein of unknown function DUF1311; KEGG: psb:Psyr_1843 hypothetical protein; hypothetical protein complement(1919411..1919962) Tolumonas auensis DSM 9187 7886411 YP_002892949.1 CDS Tola_1753 NC_012691.1 1919964 1922555 R KEGG: hypothetical protein; hypothetical protein complement(1919964..1922555) Tolumonas auensis DSM 9187 7886412 YP_002892950.1 CDS Tola_1754 NC_012691.1 1922709 1923542 R PFAM: dienelactone hydrolase; KEGG: mlo:mll1495 carboxymethylenebutenolidase; Carboxymethylenebutenolidase complement(1922709..1923542) Tolumonas auensis DSM 9187 7886413 YP_002892951.1 CDS Tola_1755 NC_012691.1 1923588 1924022 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: aha:AHA_1594 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis MoaE protein complement(1923588..1924022) Tolumonas auensis DSM 9187 7886414 YP_002892952.1 CDS Tola_1756 NC_012691.1 1924024 1924266 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: aha:AHA_1593 molybdopterin synthase small subunit; molybdopterin converting factor subunit 1 complement(1924024..1924266) Tolumonas auensis DSM 9187 7886415 YP_002892953.1 CDS Tola_1757 NC_012691.1 1924306 1924785 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: aha:AHA_1592 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C complement(1924306..1924785) Tolumonas auensis DSM 9187 7886416 YP_002892954.1 CDS Tola_1758 NC_012691.1 1924795 1925307 R TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: vpa:VP2095 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B complement(1924795..1925307) Tolumonas auensis DSM 9187 7886417 YP_002892955.1 CDS Tola_1759 NC_012691.1 1925304 1925888 R KEGG: xca:xccb100_2301 hypothetical protein; hypothetical protein complement(1925304..1925888) Tolumonas auensis DSM 9187 7886418 YP_002892956.1 CDS moaA NC_012691.1 1925890 1926900 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(1925890..1926900) Tolumonas auensis DSM 9187 7886419 YP_002892957.1 CDS Tola_1761 NC_012691.1 1927204 1928007 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: esa:ESA_02510 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD binding protein complement(1927204..1928007) Tolumonas auensis DSM 9187 7886420 YP_002892958.1 CDS Tola_1762 NC_012691.1 1928016 1929236 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: aha:AHA_1600 molybdopterin biosynthesis protein MoeA; molybdenum cofactor synthesis domain-containing protein complement(1928016..1929236) Tolumonas auensis DSM 9187 7886421 YP_002892959.1 CDS Tola_1763 NC_012691.1 1929247 1929576 R TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: vvy:VVA0947 ferredoxin subunit of nitrite reductase; nitrite reductase (NAD(P)H) small subunit complement(1929247..1929576) Tolumonas auensis DSM 9187 7886422 YP_002892960.1 CDS Tola_1764 NC_012691.1 1929573 1932092 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: aha:AHA_3408 nitrite reductase [NAD(P)H], large subunit; nitrite reductase (NAD(P)H) large subunit complement(1929573..1932092) Tolumonas auensis DSM 9187 7886423 YP_002892961.1 CDS Tola_1765 NC_012691.1 1932470 1934197 R PFAM: Serine/threonine protein kinase-related; Protein phosphatase 2C-like; tyrosine protein kinase; Stage II sporulation E family protein; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; tyrosine protein kinase; KEGG: ppr:PBPRA2520 hypothetical protein; protein serine/threonine phosphatase complement(1932470..1934197) Tolumonas auensis DSM 9187 7886424 YP_002892962.1 CDS Tola_1766 NC_012691.1 1934282 1935751 R PFAM: major facilitator superfamily MFS_1; KEGG: vsp:VS_II1029 putative nitrate transporter; major facilitator superfamily protein complement(1934282..1935751) Tolumonas auensis DSM 9187 7886425 YP_002892963.1 CDS Tola_1767 NC_012691.1 1936115 1937032 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: asa:ASA_0430 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1936115..1937032) Tolumonas auensis DSM 9187 7884783 YP_002892964.1 CDS Tola_1768 NC_012691.1 1937164 1937643 D KEGG: swi:Swit_3329 hypothetical protein; hypothetical protein 1937164..1937643 Tolumonas auensis DSM 9187 7884784 YP_002892965.1 CDS Tola_1769 NC_012691.1 1937692 1938807 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bch:Bcen2424_6908 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1937692..1938807 Tolumonas auensis DSM 9187 7884785 YP_002892966.1 CDS Tola_1770 NC_012691.1 1938864 1939694 R KEGG: aha:AHA_3409 nitrate transport ATP-binding protein NrtC; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(1938864..1939694) Tolumonas auensis DSM 9187 7884786 YP_002892967.1 CDS Tola_1771 NC_012691.1 1939713 1940651 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VPA1057 putative nitrate transporter; binding-protein-dependent transport system inner membrane protein complement(1939713..1940651) Tolumonas auensis DSM 9187 7884787 YP_002892968.1 CDS Tola_1772 NC_012691.1 1940706 1942070 R KEGG: vvu:VV2_0393 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(1940706..1942070) Tolumonas auensis DSM 9187 7884788 YP_002892969.1 CDS Tola_1773 NC_012691.1 1942291 1942851 R PFAM: ANTAR domain protein; KEGG: aha:AHA_3412 response regulator NasT, putative; ANTAR domain-containing protein complement(1942291..1942851) Tolumonas auensis DSM 9187 7884789 YP_002892970.1 CDS Tola_1774 NC_012691.1 1942874 1943635 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aha:AHA_3413 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(1942874..1943635) Tolumonas auensis DSM 9187 7884790 YP_002892971.1 CDS Tola_1775 NC_012691.1 1943662 1946280 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: aha:AHA_3414 nitrate reductase; molybdopterin oxidoreductase complement(1943662..1946280) Tolumonas auensis DSM 9187 7884791 YP_002892972.1 CDS Tola_1776 NC_012691.1 1946548 1947141 D KEGG: afr:AFE_0518 hypothetical protein; hypothetical protein 1946548..1947141 Tolumonas auensis DSM 9187 7884792 YP_002892973.1 CDS Tola_1777 NC_012691.1 1947216 1947437 D hypothetical protein 1947216..1947437 Tolumonas auensis DSM 9187 7884793 YP_002892974.1 CDS Tola_1778 NC_012691.1 1947505 1947936 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: mlo:mll2045 hypothetical protein; cupin 1947505..1947936 Tolumonas auensis DSM 9187 7884794 YP_002892975.1 CDS Tola_1779 NC_012691.1 1948072 1949019 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1948072..1949019 Tolumonas auensis DSM 9187 7884795 YP_002892976.1 CDS Tola_1780 NC_012691.1 1949053 1950027 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_0057 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1949053..1950027 Tolumonas auensis DSM 9187 7884796 YP_002892977.1 CDS Tola_1781 NC_012691.1 1950218 1952956 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: psa:PST_3076 probable cation-transporting P-type ATPase; P-type HAD superfamily ATPase 1950218..1952956 Tolumonas auensis DSM 9187 7884797 YP_002892978.1 CDS Tola_1782 NC_012691.1 1952953 1954149 D PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_0827 major facilitator transporter; major facilitator superfamily protein 1952953..1954149 Tolumonas auensis DSM 9187 7884798 YP_002892979.1 CDS Tola_1783 NC_012691.1 1954135 1955025 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: neu:NE1724 phosphotransferase domain-containing protein; PHP domain-containing protein complement(1954135..1955025) Tolumonas auensis DSM 9187 7884799 YP_002892980.1 CDS Tola_1784 NC_012691.1 1955048 1955830 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: sme:SMc03890 putative transcription regulator protein; Cro/CI family transcriptional regulator complement(1955048..1955830) Tolumonas auensis DSM 9187 7884800 YP_002892981.1 CDS Tola_1785 NC_012691.1 1956039 1956356 D KEGG: rfr:Rfer_2440 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1956039..1956356 Tolumonas auensis DSM 9187 7884801 YP_002892982.1 CDS Tola_1786 NC_012691.1 1956378 1957385 R PFAM: aldo/keto reductase; KEGG: abm:ABSDF3367 oxidoreductase; aldo/keto reductase complement(1956378..1957385) Tolumonas auensis DSM 9187 7884802 YP_002892983.1 CDS Tola_1788 NC_012691.1 1958025 1958192 R hypothetical protein complement(1958025..1958192) Tolumonas auensis DSM 9187 7884804 YP_002892984.1 CDS Tola_1789 NC_012691.1 1958300 1959205 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mfa:Mfla_2621 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1958300..1959205) Tolumonas auensis DSM 9187 7884805 YP_002892985.1 CDS Tola_1790 NC_012691.1 1959449 1960597 D PFAM: iron-containing alcohol dehydrogenase; KEGG: abu:Abu_0784 iron-containing NADP-dependent alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1959449..1960597 Tolumonas auensis DSM 9187 7884806 YP_002892986.1 CDS Tola_1791 NC_012691.1 1960946 1961695 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein TIM barrel 1960946..1961695 Tolumonas auensis DSM 9187 7884807 YP_002892987.1 CDS Tola_1792 NC_012691.1 1961702 1962700 D PFAM: PfkB domain protein; KEGG: cko:CKO_05007 hypothetical protein; PfkB domain-containing protein 1961702..1962700 Tolumonas auensis DSM 9187 7884808 YP_002892988.1 CDS Tola_1793 NC_012691.1 1962721 1964001 D PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_0191 transporter, major facilitator family; major facilitator superfamily protein 1962721..1964001 Tolumonas auensis DSM 9187 7884809 YP_002892989.1 CDS Tola_1794 NC_012691.1 1964014 1964991 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_0057 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1964014..1964991 Tolumonas auensis DSM 9187 7884810 YP_002892990.1 CDS Tola_1795 NC_012691.1 1965016 1966824 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1965016..1966824 Tolumonas auensis DSM 9187 7884811 YP_002892991.1 CDS Tola_1796 NC_012691.1 1966840 1967487 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: asa:ASA_4108 2-dehydro-3-deoxyphosphogluconate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 1966840..1967487 Tolumonas auensis DSM 9187 7884812 YP_002892992.1 CDS Tola_1797 NC_012691.1 1967780 1968127 D KEGG: dps:DP2998 hypothetical protein; hypothetical protein 1967780..1968127 Tolumonas auensis DSM 9187 7884813 YP_002892993.1 CDS Tola_1798 NC_012691.1 1968193 1971402 D KEGG: ypy:YPK_3147 TPR repeat-containing protein; hypothetical protein 1968193..1971402 Tolumonas auensis DSM 9187 7884814 YP_002892994.1 CDS Tola_1799 NC_012691.1 1971651 1972682 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: spe:Spro_0061 LacI family transcription regulator; transcriptional regulator, LacI family complement(1971651..1972682) Tolumonas auensis DSM 9187 7884815 YP_002892995.1 CDS Tola_1800 NC_012691.1 1972798 1973217 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: asa:ASA_1865 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1972798..1973217) Tolumonas auensis DSM 9187 7884816 YP_002892996.1 CDS Tola_1801 NC_012691.1 1973217 1973978 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: tbd:Tbd_0712 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel complement(1973217..1973978) Tolumonas auensis DSM 9187 7884817 YP_002892997.1 CDS Tola_1802 NC_012691.1 1973985 1974686 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: psp:PSPPH_2889 ferric siderophore transporter, periplasmic energy transduction protein TonB; TonB family protein complement(1973985..1974686) Tolumonas auensis DSM 9187 7884818 YP_002892998.1 CDS Tola_1803 NC_012691.1 1974913 1975113 D TIGRFAM: selenium-binding protein YdfZ; KEGG: aha:AHA_0226 hypothetical protein; selenium-binding protein YdfZ 1974913..1975113 Tolumonas auensis DSM 9187 7884819 YP_002892999.1 CDS Tola_1804 NC_012691.1 1975208 1975645 R KEGG: cja:CJA_0606 hypothetical protein; hypothetical protein complement(1975208..1975645) Tolumonas auensis DSM 9187 7884820 YP_002893000.1 CDS Tola_1805 NC_012691.1 1975918 1977006 D TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: mlo:mlr2782 hypothetical protein; membrane protein AbrB 1975918..1977006 Tolumonas auensis DSM 9187 7884821 YP_002893001.1 CDS Tola_1806 NC_012691.1 1977077 1978366 D KEGG: mmw:Mmwyl1_1384 putative chaperone; putative chaperone 1977077..1978366 Tolumonas auensis DSM 9187 7884822 YP_002893002.1 CDS Tola_1807 NC_012691.1 1978359 1978619 R hypothetical protein complement(1978359..1978619) Tolumonas auensis DSM 9187 7884823 YP_002893003.1 CDS Tola_1808 NC_012691.1 1978631 1979341 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU31840 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1978631..1979341) Tolumonas auensis DSM 9187 7884824 YP_002893004.1 CDS Tola_1809 NC_012691.1 1979492 1981525 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: bur:Bcep18194_C6710 beta-glucosidase; glycoside hydrolase family 3 complement(1979492..1981525) Tolumonas auensis DSM 9187 7884825 YP_002893005.1 CDS Tola_1810 NC_012691.1 1981974 1982633 D KEGG: mgm:Mmc1_2089 hypothetical protein; hypothetical protein 1981974..1982633 Tolumonas auensis DSM 9187 7884826 YP_002893006.1 CDS Tola_1811 NC_012691.1 1982751 1983479 D KEGG: maq:Maqu_2931 hypothetical protein; hypothetical protein 1982751..1983479 Tolumonas auensis DSM 9187 7884827 YP_002893007.1 CDS Tola_1812 NC_012691.1 1983776 1984174 D hypothetical protein 1983776..1984174 Tolumonas auensis DSM 9187 7884828 YP_002893008.1 CDS Tola_1813 NC_012691.1 1984329 1984607 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: vch:VCA0503 hypothetical protein; RelE/StbE family addiction module toxin complement(1984329..1984607) Tolumonas auensis DSM 9187 7884829 YP_002893009.1 CDS Tola_1814 NC_012691.1 1984611 1984889 R KEGG: vco:VC0395_0742 transcriptional regulator, CopG family; CopG family transcriptional regulator complement(1984611..1984889) Tolumonas auensis DSM 9187 7884830 YP_002893010.1 CDS Tola_1815 NC_012691.1 1985048 1985686 D PFAM: nitroreductase; KEGG: mmw:Mmwyl1_0326 nitroreductase; nitroreductase 1985048..1985686 Tolumonas auensis DSM 9187 7884831 YP_002893011.1 CDS Tola_1816 NC_012691.1 1986118 1986426 R KEGG: bcm:Bcenmc03_4115 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1986118..1986426) Tolumonas auensis DSM 9187 7884832 YP_002893012.1 CDS Tola_1818 NC_012691.1 1986978 1987310 D KEGG: vsp:VS_II0381 hypothetical protein; hypothetical protein 1986978..1987310 Tolumonas auensis DSM 9187 7884834 YP_002893013.1 CDS Tola_1819 NC_012691.1 1987297 1987611 D KEGG: vfi:VF_1353 virulence gene repressor RsaL; virulence gene repressor RsaL 1987297..1987611 Tolumonas auensis DSM 9187 7884835 YP_002893014.1 CDS Tola_1820 NC_012691.1 1987734 1988165 D KEGG: smd:Smed_5610 SNARE associated Golgi protein; hypothetical protein 1987734..1988165 Tolumonas auensis DSM 9187 7884836 YP_002893015.1 CDS Tola_1821 NC_012691.1 1988170 1988517 R KEGG: apa:APP7_0872 hypothetical protein; hypothetical protein complement(1988170..1988517) Tolumonas auensis DSM 9187 7884837 YP_002893016.1 CDS Tola_1822 NC_012691.1 1988685 1989149 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: aha:AHA_0662 Rrf2 family protein; AsnC family transcriptional regulator 1988685..1989149 Tolumonas auensis DSM 9187 7884838 YP_002893017.1 CDS Tola_1823 NC_012691.1 1989154 1989897 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: asa:ASA_0710 ferredoxin--NADP reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(1989154..1989897) Tolumonas auensis DSM 9187 7884839 YP_002893018.1 CDS Tola_1824 NC_012691.1 1989978 1991123 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eba:ebA539 anaerobic nitric oxide reductase flavorubredoxin; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1989978..1991123) Tolumonas auensis DSM 9187 7884840 YP_002893019.1 CDS Tola_1825 NC_012691.1 1991137 1992552 R detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin complement(1991137..1992552) Tolumonas auensis DSM 9187 7884841 YP_002893020.1 CDS Tola_1826 NC_012691.1 1992734 1993378 R PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: ppd:Ppro_1936 methyltransferase type 11; type 11 methyltransferase complement(1992734..1993378) Tolumonas auensis DSM 9187 7884842 YP_002893021.1 CDS Tola_1827 NC_012691.1 1993400 1994347 R PFAM: putative sugar-binding domain protein; KEGG: ypb:YPTS_0856 DeoR family transcriptional regulator; Cro/CI family transcriptional regulator complement(1993400..1994347) Tolumonas auensis DSM 9187 7884843 YP_002893022.1 CDS Tola_1828 NC_012691.1 1994493 1995584 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: ppr:PBPRA0799 putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1994493..1995584 Tolumonas auensis DSM 9187 7884844 YP_002893023.1 CDS Tola_1829 NC_012691.1 1995640 1996086 R PFAM: RbsD or FucU transport; KEGG: rlt:Rleg2_4629 RbsD or FucU transport; transport protein RbsD/FucU complement(1995640..1996086) Tolumonas auensis DSM 9187 7884845 YP_002893024.1 CDS Tola_1830 NC_012691.1 1996176 1997594 R PFAM: L-fucose isomerase-like-like; KEGG: asu:Asuc_0168 hypothetical protein; L-fucose isomerase-like protein complement(1996176..1997594) Tolumonas auensis DSM 9187 7884846 YP_002893025.1 CDS Tola_1831 NC_012691.1 1997613 1999094 R PFAM: carbohydrate kinase FGGY; KEGG: asu:Asuc_0169 carbohydrate kinase FGGY; carbohydrate kinase FGGY complement(1997613..1999094) Tolumonas auensis DSM 9187 7884847 YP_002893026.1 CDS Tola_1832 NC_012691.1 1999087 2000040 R PFAM: Transketolase domain protein; Transketolase central region; KEGG: yen:YE0823 C-terminal region of transketolase; transketolase complement(1999087..2000040) Tolumonas auensis DSM 9187 7884848 YP_002893027.1 CDS Tola_1833 NC_012691.1 2000033 2000863 R PFAM: Transketolase domain protein; KEGG: asu:Asuc_0171 transketolase domain-containing protein; transketolase complement(2000033..2000863) Tolumonas auensis DSM 9187 7884849 YP_002893028.1 CDS Tola_1834 NC_012691.1 2000987 2002069 R PFAM: inner-membrane translocator; KEGG: eca:ECA1949 putative sugar ABC transporter, permease protein; inner-membrane translocator complement(2000987..2002069) Tolumonas auensis DSM 9187 7884850 YP_002893029.1 CDS Tola_1835 NC_012691.1 2002072 2003589 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asu:Asuc_0173 ABC transporter related; ABC transporter complement(2002072..2003589) Tolumonas auensis DSM 9187 7884851 YP_002893030.1 CDS Tola_1836 NC_012691.1 2003595 2004203 R KEGG: asu:Asuc_0174 putative lipoprotein; putative lipoprotein complement(2003595..2004203) Tolumonas auensis DSM 9187 7884852 YP_002893031.1 CDS Tola_1837 NC_012691.1 2004253 2005191 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB0812 ABC transporter, periplasmic sugar binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2004253..2005191) Tolumonas auensis DSM 9187 7884853 YP_002893032.1 CDS Tola_1838 NC_012691.1 2005708 2006661 D KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 2005708..2006661 Tolumonas auensis DSM 9187 7884854 YP_002893033.1 CDS Tola_1839 NC_012691.1 2006889 2008889 D TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: vvu:VV1_1537 transketolase; transketolase 2006889..2008889 Tolumonas auensis DSM 9187 7884855 YP_002893034.1 CDS Tola_1840 NC_012691.1 2008939 2010483 R Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator complement(2008939..2010483) Tolumonas auensis DSM 9187 7884856 YP_002893035.1 CDS Tola_1841 NC_012691.1 2010647 2011312 D Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 2010647..2011312 Tolumonas auensis DSM 9187 7884857 YP_002893036.1 CDS Tola_1842 NC_012691.1 2011378 2012574 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 2011378..2012574 Tolumonas auensis DSM 9187 7884858 YP_002893037.1 CDS Tola_1843 NC_012691.1 2012605 2013783 R KEGG: maq:Maqu_3846 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2012605..2013783) Tolumonas auensis DSM 9187 7884859 YP_002893038.1 CDS Tola_1844 NC_012691.1 2013886 2016546 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: dar:Daro_1851 ATPase, E1-E2 type; P-type HAD superfamily ATPase complement(2013886..2016546) Tolumonas auensis DSM 9187 7884860 YP_002893039.1 CDS Tola_1845 NC_012691.1 2016762 2017199 D PFAM: NUDIX hydrolase; KEGG: cvi:CV_1928 hypothetical protein; NUDIX hydrolase 2016762..2017199 Tolumonas auensis DSM 9187 7884861 YP_002893040.1 CDS Tola_1846 NC_012691.1 2017264 2018220 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_6226 putative transcriptional regulator; LysR family transcriptional regulator complement(2017264..2018220) Tolumonas auensis DSM 9187 7884862 YP_002893041.1 CDS Tola_1847 NC_012691.1 2018352 2019767 D biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit A 2018352..2019767 Tolumonas auensis DSM 9187 7884863 YP_002893042.1 CDS Tola_1848 NC_012691.1 2019807 2021618 D catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 2019807..2021618 Tolumonas auensis DSM 9187 7884135 YP_002893043.1 CDS Tola_1849 NC_012691.1 2021777 2023405 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: sfr:Sfri_3478 sulfatase; sulfatase 2021777..2023405 Tolumonas auensis DSM 9187 7884217 YP_002893044.1 CDS Tola_1850 NC_012691.1 2023903 2024547 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ypi:YpsIP31758_2248 repressor protein C2; XRE family transcriptional regulator complement(2023903..2024547) Tolumonas auensis DSM 9187 7884218 YP_002893045.1 CDS Tola_1851 NC_012691.1 2024835 2025077 R hypothetical protein complement(2024835..2025077) Tolumonas auensis DSM 9187 7884219 YP_002893046.1 CDS Tola_1852 NC_012691.1 2025515 2026681 D PFAM: beta-lactamase domain protein; KEGG: eca:ECA2173 hypothetical protein; beta-lactamase domain-containing protein 2025515..2026681 Tolumonas auensis DSM 9187 7884220 YP_002893047.1 CDS Tola_1853 NC_012691.1 2026666 2027832 R PFAM: aminotransferase class I and II; KEGG: cco:CCC13826_0327 aminotransferase, class II; class I and II aminotransferase complement(2026666..2027832) Tolumonas auensis DSM 9187 7884221 YP_002893048.1 CDS Tola_1854 NC_012691.1 2027825 2028679 R KEGG: ccv:CCV52592_2240 hypothetical protein; hypothetical protein complement(2027825..2028679) Tolumonas auensis DSM 9187 7884222 YP_002893049.1 CDS Tola_1855 NC_012691.1 2028710 2029915 R PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_4451 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2028710..2029915) Tolumonas auensis DSM 9187 7884223 YP_002893050.1 CDS Tola_1857 NC_012691.1 2031236 2032474 R KEGG: bsu:BSU04060 hypothetical protein; hypothetical protein complement(2031236..2032474) Tolumonas auensis DSM 9187 7884225 YP_002893051.1 CDS Tola_1858 NC_012691.1 2032508 2033263 R PFAM: LamB/YcsF family protein; KEGG: bsu:BSU04050 hypothetical protein; LamB/YcsF family protein complement(2032508..2033263) Tolumonas auensis DSM 9187 7884226 YP_002893052.1 CDS Tola_1859 NC_012691.1 2033265 2034212 R KEGG: kpn:KPN_00723 putative carboxylase; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase-like protein complement(2033265..2034212) Tolumonas auensis DSM 9187 7884227 YP_002893053.1 CDS Tola_1860 NC_012691.1 2034205 2034897 R PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: cti:RALTA_A0066 allophanate hydrolase subunit1 (AHS1); allophanate hydrolase subunit 1 complement(2034205..2034897) Tolumonas auensis DSM 9187 7884228 YP_002893054.1 CDS Tola_1861 NC_012691.1 2035045 2035557 D KEGG: cvi:CV_3169 hypothetical protein; putative transcriptional regulator 2035045..2035557 Tolumonas auensis DSM 9187 7884229 YP_002893055.1 CDS Tola_1862 NC_012691.1 2035740 2036561 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bac:BamMC406_4454 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2035740..2036561 Tolumonas auensis DSM 9187 7884230 YP_002893056.1 CDS Tola_1863 NC_012691.1 2036618 2038180 D KEGG: aci:ACIAD3488 amino acid ABC transporter ATP-binding protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; SMART: AAA ATPase; polar amino acid ABC transporter inner membrane subunit 2036618..2038180 Tolumonas auensis DSM 9187 7884231 YP_002893057.1 CDS Tola_1864 NC_012691.1 2038164 2038832 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pfl:PFL_4301 GntR family transcriptional regulator; GntR family transcriptional regulator 2038164..2038832 Tolumonas auensis DSM 9187 7884232 YP_002893058.1 CDS Tola_1865 NC_012691.1 2038835 2039707 D KEGG: pfo:Pfl01_4036 hypothetical protein; hypothetical protein 2038835..2039707 Tolumonas auensis DSM 9187 7884233 YP_002893059.1 CDS Tola_1866 NC_012691.1 2039795 2041306 R KEGG: gsu:GSU1945 fibronectin type III domain-containing protein; hypothetical protein complement(2039795..2041306) Tolumonas auensis DSM 9187 7884234 YP_002893060.1 CDS Tola_1867 NC_012691.1 2041471 2042376 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: kpn:KPN_01938 putative transmembrane protein; hypothetical protein complement(2041471..2042376) Tolumonas auensis DSM 9187 7884235 YP_002893061.1 CDS Tola_1868 NC_012691.1 2042495 2043355 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1743 AraC family transcriptional regulator; AraC family transcriptional regulator 2042495..2043355 Tolumonas auensis DSM 9187 7884236 YP_002893062.1 CDS Tola_1869 NC_012691.1 2043556 2043981 D hypothetical protein 2043556..2043981 Tolumonas auensis DSM 9187 7884237 YP_002893063.1 CDS Tola_1870 NC_012691.1 2044114 2045355 R PFAM: HipA domain protein; KEGG: vei:Veis_0672 HipA domain protein; HipA domain-containing protein complement(2044114..2045355) Tolumonas auensis DSM 9187 7884238 YP_002893064.1 CDS Tola_1871 NC_012691.1 2045345 2045626 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cps:CPS_1618 putative DNA-binding protein; XRE family transcriptional regulator complement(2045345..2045626) Tolumonas auensis DSM 9187 7884239 YP_002893065.1 CDS srlR NC_012691.1 2046028 2046792 R regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR complement(2046028..2046792) Tolumonas auensis DSM 9187 7884241 YP_002893066.1 CDS Tola_1874 NC_012691.1 2046872 2047228 R PFAM: Glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator; glucitol operon activator complement(2046872..2047228) Tolumonas auensis DSM 9187 7884242 YP_002893067.1 CDS Tola_1875 NC_012691.1 2047334 2048110 R catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase complement(2047334..2048110) Tolumonas auensis DSM 9187 7884243 YP_002893068.1 CDS Tola_1876 NC_012691.1 2048193 2048558 R PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: asa:ASA_3581 PTS system, glucitol/sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(2048193..2048558) Tolumonas auensis DSM 9187 7884244 YP_002893069.1 CDS Tola_1877 NC_012691.1 2048577 2049560 R KEGG: asa:ASA_3582 PTS system, glucitol/sorbitol-specific IIBC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(2048577..2049560) Tolumonas auensis DSM 9187 7884245 YP_002893070.1 CDS Tola_1878 NC_012691.1 2049582 2050136 R TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol-specific IIBC component; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(2049582..2050136) Tolumonas auensis DSM 9187 7884246 YP_002893071.1 CDS Tola_1882 NC_012691.1 2054014 2054196 D PFAM: YcfA family protein; KEGG: ecf:ECH74115_A0043 hypothetical protein; hypothetical protein 2054014..2054196 Tolumonas auensis DSM 9187 7884253 YP_002893072.1 CDS Tola_1883 NC_012691.1 2054227 2054661 D KEGG: plu:plu3021 hypothetical protein; CopG/Arc/MetJ family transcriptional regulator 2054227..2054661 Tolumonas auensis DSM 9187 7884254 YP_002893073.1 CDS Tola_1884 NC_012691.1 2054975 2055994 R KEGG: son:SO_4578 transposase, putative; transposase complement(2054975..2055994) Tolumonas auensis DSM 9187 7884255 YP_002893074.1 CDS Tola_1885 NC_012691.1 2056118 2057017 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: stm:STM2036 transcriptional regulator; AraC family transcriptional regulator complement(2056118..2057017) Tolumonas auensis DSM 9187 7884256 YP_002893075.1 CDS Tola_1886 NC_012691.1 2057247 2057444 R hypothetical protein complement(2057247..2057444) Tolumonas auensis DSM 9187 7884257 YP_002893076.1 CDS gutQ NC_012691.1 2057505 2058470 R catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase complement(2057505..2058470) Tolumonas auensis DSM 9187 7884258 YP_002893077.1 CDS Tola_1888 NC_012691.1 2058482 2059471 R PFAM: oxidoreductase domain protein; KEGG: bsu:BSU31170 hypothetical protein; oxidoreductase domain-containing protein complement(2058482..2059471) Tolumonas auensis DSM 9187 7884259 YP_002893078.1 CDS Tola_1889 NC_012691.1 2059566 2060387 D PFAM: protein of unknown function DUF299; KEGG: eca:ECA1852 hypothetical protein; hypothetical protein 2059566..2060387 Tolumonas auensis DSM 9187 7884260 YP_002893079.1 CDS Tola_1890 NC_012691.1 2060454 2061464 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(2060454..2061464) Tolumonas auensis DSM 9187 7884261 YP_002893080.1 CDS Tola_1891 NC_012691.1 2061527 2063890 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2061527..2063890) Tolumonas auensis DSM 9187 7884262 YP_002893081.1 CDS gldA NC_012691.1 2064007 2065113 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(2064007..2065113) Tolumonas auensis DSM 9187 7884263 YP_002893082.1 CDS Tola_1893 NC_012691.1 2065683 2066366 D PFAM: Transaldolase; KEGG: ecd:ECDH10B_4135 fructose-6-phosphate aldolase 2; Transaldolase 2065683..2066366 Tolumonas auensis DSM 9187 7884264 YP_002893083.1 CDS Tola_1894 NC_012691.1 2066486 2067328 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: stt:t3531 glycerol uptake facilitator protein; MIP family channel protein 2066486..2067328 Tolumonas auensis DSM 9187 7884265 YP_002893084.1 CDS Tola_1895 NC_012691.1 2067454 2068311 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_03040 hypothetical protein; AraC family transcriptional regulator complement(2067454..2068311) Tolumonas auensis DSM 9187 7884266 YP_002893085.1 CDS Tola_1896 NC_012691.1 2068600 2069802 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pin:Ping_2760 acetate kinase; acetate kinase 2068600..2069802 Tolumonas auensis DSM 9187 7884267 YP_002893086.1 CDS Tola_1897 NC_012691.1 2070072 2070920 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: seg:SG3300 putative AraC-family transcriptional regulator; AraC family transcriptional regulator 2070072..2070920 Tolumonas auensis DSM 9187 7884268 YP_002893087.1 CDS Tola_1898 NC_012691.1 2070930 2071277 R TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; KEGG: sdy:SDY_3788 PTS system fructose-like IIB component 2; PTS system fructose-specific transporter subunit IIB complement(2070930..2071277) Tolumonas auensis DSM 9187 7884269 YP_002893088.1 CDS Tola_1899 NC_012691.1 2071581 2072630 R TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: bcb:BCB4264_A3816 PTS system, fructose-specific IIABC component; PTS system fructose subfamily transporter subunit IIC complement(2071581..2072630) Tolumonas auensis DSM 9187 7884270 YP_002893089.1 CDS Tola_1900 NC_012691.1 2072645 2073532 R PFAM: ROK family protein; KEGG: bha:BH0797 glucose kinase; ROK family protein complement(2072645..2073532) Tolumonas auensis DSM 9187 7884271 YP_002893090.1 CDS Tola_1901 NC_012691.1 2073963 2074826 R KEGG: ecz:ECS88_4407 pyruvate formate lyase II activase; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; pyruvate formate lyase II activase complement(2073963..2074826) Tolumonas auensis DSM 9187 7884272 YP_002893091.1 CDS pflD NC_012691.1 2074792 2077092 R involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein; putative formate acetyltransferase 2 complement(2074792..2077092) Tolumonas auensis DSM 9187 7884273 YP_002893092.1 CDS Tola_1903 NC_012691.1 2077150 2077470 R FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; putative PTS system fructose-like transporter subunit EIIB complement(2077150..2077470) Tolumonas auensis DSM 9187 7884274 YP_002893093.1 CDS Tola_1904 NC_012691.1 2077537 2078601 R FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; putative fructose-like permease EIIC subunit 2 complement(2077537..2078601) Tolumonas auensis DSM 9187 7884275 YP_002893094.1 CDS Tola_1905 NC_012691.1 2078915 2080348 R FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; putative fructose-like permease EIIC subunit 2 complement(2078915..2080348) Tolumonas auensis DSM 9187 7884276 YP_002893095.1 CDS Tola_1906 NC_012691.1 2080675 2081442 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: kpe:KPK_3556 phytanoyl-CoA dioxygenase family protein; Phytanoyl-CoA dioxygenase complement(2080675..2081442) Tolumonas auensis DSM 9187 7884277 YP_002893096.1 CDS Tola_1907 NC_012691.1 2081907 2084414 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, fructose subfamily, IIA subunit; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: efe:EFER_3815 fused putative PTS enzymes: HPr component ; enzyme I component ; enzyme IIA component; phosphoenolpyruvate-protein phosphotransferase 2081907..2084414 Tolumonas auensis DSM 9187 7884278 YP_002893097.1 CDS Tola_1908 NC_012691.1 2084667 2084873 R KEGG: sbl:Sbal_2316 Cro/CI family transcriptional regulator; Cro/CI family transcriptional regulator complement(2084667..2084873) Tolumonas auensis DSM 9187 7884279 YP_002893098.1 CDS Tola_1909 NC_012691.1 2085003 2085212 D KEGG: spc:Sputcn32_2898 hypothetical protein; hypothetical protein 2085003..2085212 Tolumonas auensis DSM 9187 7884280 YP_002893099.1 CDS Tola_1910 NC_012691.1 2085224 2086408 D PFAM: integrase family protein; KEGG: prw:PsycPRwf_0726 phage integrase family protein; integrase family protein 2085224..2086408 Tolumonas auensis DSM 9187 7884281 YP_002893100.1 CDS Tola_1911 NC_012691.1 2086425 2087321 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: shn:Shewana3_2355 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2086425..2087321 Tolumonas auensis DSM 9187 7884282 YP_002893101.1 CDS Tola_1912 NC_012691.1 2087410 2090607 R PFAM: integrase family protein; KEGG: shn:Shewana3_2354 phage integrase family protein; integrase family protein complement(2087410..2090607) Tolumonas auensis DSM 9187 7884283 YP_002893102.1 CDS Tola_1913 NC_012691.1 2090601 2092970 R KEGG: spc:Sputcn32_2893 hypothetical protein; hypothetical protein complement(2090601..2092970) Tolumonas auensis DSM 9187 7884284 YP_002893103.1 CDS Tola_1914 NC_012691.1 2092960 2093610 R hypothetical protein complement(2092960..2093610) Tolumonas auensis DSM 9187 7884285 YP_002893104.1 CDS Tola_1915 NC_012691.1 2094619 2095473 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2094619..2095473 Tolumonas auensis DSM 9187 7884290 YP_002893105.1 CDS Tola_1916 NC_012691.1 2095495 2096571 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA4045 sensor protein BasS/PmrB; sensor protein BasS/PmrB complement(2095495..2096571) Tolumonas auensis DSM 9187 7884291 YP_002893106.1 CDS Tola_1917 NC_012691.1 2096552 2097214 R response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR complement(2096552..2097214) Tolumonas auensis DSM 9187 7884292 YP_002893107.1 CDS Tola_1918 NC_012691.1 2097287 2098678 R KEGG: vvy:VV1362 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); cysteinyl-tRNA synthetase complement(2097287..2098678) Tolumonas auensis DSM 9187 7884293 YP_002893108.1 CDS Tola_1919 NC_012691.1 2098839 2099336 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: asa:ASA_1614 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 2098839..2099336 Tolumonas auensis DSM 9187 7884294 YP_002893109.1 CDS Tola_1920 NC_012691.1 2099385 2100125 D TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: asa:ASA_1612 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 2099385..2100125 Tolumonas auensis DSM 9187 7884295 YP_002893110.1 CDS Tola_1923 NC_012691.1 2101371 2102966 R KEGG: ppr:PBPRA1594 hypothetical protein; hypothetical protein complement(2101371..2102966) Tolumonas auensis DSM 9187 7883215 YP_002893111.1 CDS Tola_1924 NC_012691.1 2102959 2107929 R PFAM: NERD domain protein; KEGG: ppr:PBPRA1593 hypothetical protein; NERD domain-containing protein complement(2102959..2107929) Tolumonas auensis DSM 9187 7883216 YP_002893112.1 CDS Tola_1925 NC_012691.1 2108343 2108741 R hypothetical protein complement(2108343..2108741) Tolumonas auensis DSM 9187 7883217 YP_002893113.1 CDS Tola_1926 NC_012691.1 2108822 2109757 R hypothetical protein complement(2108822..2109757) Tolumonas auensis DSM 9187 7883218 YP_002893114.1 CDS Tola_1927 NC_012691.1 2110580 2112136 R PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein; KEGG: aha:AHA_1886 transcriptional regulatory protein TyrR; transcriptional regulator TyrR complement(2110580..2112136) Tolumonas auensis DSM 9187 7883219 YP_002893115.1 CDS Tola_1928 NC_012691.1 2112968 2114116 R PFAM: iron-containing alcohol dehydrogenase; KEGG: abu:Abu_0784 iron-containing NADP-dependent alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2112968..2114116) Tolumonas auensis DSM 9187 7883221 YP_002893116.1 CDS Tola_1929 NC_012691.1 2114262 2114762 R KEGG: ank:AnaeK_3353 hypothetical protein; hypothetical protein complement(2114262..2114762) Tolumonas auensis DSM 9187 7883222 YP_002893117.1 CDS Tola_1930 NC_012691.1 2114773 2115879 R KEGG: mmw:Mmwyl1_1946 peptidase S15; peptidase S15 complement(2114773..2115879) Tolumonas auensis DSM 9187 7883223 YP_002893118.1 CDS Tola_1932 NC_012691.1 2116174 2117124 D PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0625 transcription regulator protein; AraC family transcriptional regulator 2116174..2117124 Tolumonas auensis DSM 9187 7883225 YP_002893119.1 CDS Tola_1934 NC_012691.1 2117468 2117785 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hip:CGSHiEE_08850 hypothetical protein; XRE family transcriptional regulator 2117468..2117785 Tolumonas auensis DSM 9187 7883227 YP_002893120.1 CDS Tola_1935 NC_012691.1 2117770 2118081 D TIGRFAM: HipA N-terminal domain protein; KEGG: ecg:E2348C_3786 hypothetical protein; HipA N-terminal domain-containing protein 2117770..2118081 Tolumonas auensis DSM 9187 7883228 YP_002893121.1 CDS Tola_1936 NC_012691.1 2118082 2119110 D PFAM: HipA domain protein; KEGG: hit:NTHI0786 hypothetical protein; HipA domain-containing protein 2118082..2119110 Tolumonas auensis DSM 9187 7883229 YP_002893122.1 CDS Tola_1937 NC_012691.1 2119332 2119622 D hypothetical protein 2119332..2119622 Tolumonas auensis DSM 9187 7883230 YP_002893123.1 CDS Tola_1938 NC_012691.1 2119821 2120129 D KEGG: eba:ebA2168 cation efflux system transmembrane protein; hypothetical protein 2119821..2120129 Tolumonas auensis DSM 9187 7883231 YP_002893124.1 CDS Tola_1939 NC_012691.1 2120229 2121089 R PFAM: PfkB domain protein; KEGG: msu:MS0197 RbsK protein; PfkB domain-containing protein complement(2120229..2121089) Tolumonas auensis DSM 9187 7883232 YP_002893125.1 CDS Tola_1940 NC_012691.1 2121091 2121948 R involved in rpiB and als operon repression; DNA-binding transcriptional repressor RpiR complement(2121091..2121948) Tolumonas auensis DSM 9187 7883233 YP_002893126.1 CDS Tola_1941 NC_012691.1 2121948 2122919 R PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein; inner-membrane translocator complement(2121948..2122919) Tolumonas auensis DSM 9187 7883234 YP_002893127.1 CDS Tola_1942 NC_012691.1 2122944 2124458 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0200 MglA protein; ABC transporter complement(2122944..2124458) Tolumonas auensis DSM 9187 7883235 YP_002893128.1 CDS Tola_1943 NC_012691.1 2124478 2125518 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0201 RbsB protein; periplasmic binding protein/LacI transcriptional regulator complement(2124478..2125518) Tolumonas auensis DSM 9187 7883236 YP_002893129.1 CDS Tola_1944 NC_012691.1 2125607 2126590 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: msu:MS0202 hypothetical protein; xylose isomerase domain-containing protein TIM barrel complement(2125607..2126590) Tolumonas auensis DSM 9187 7883237 YP_002893130.1 CDS Tola_1945 NC_012691.1 2127064 2127876 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sfv:SFV_3955 putative transcriptional regulator; AraC family transcriptional regulator complement(2127064..2127876) Tolumonas auensis DSM 9187 7883238 YP_002893131.1 CDS Tola_1946 NC_012691.1 2128075 2129475 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ecm:EcSMS35_3908 sugar transporter, glycoside-pentoside-hexuronide family; sugar (Glycoside-Pentoside-Hexuronide) transporter 2128075..2129475 Tolumonas auensis DSM 9187 7883239 YP_002893132.1 CDS Tola_1947 NC_012691.1 2129486 2131453 D PFAM: protein of unknown function DUF1680; KEGG: ecf:ECH74115_4952 hypothetical protein; hypothetical protein 2129486..2131453 Tolumonas auensis DSM 9187 7883240 YP_002893133.1 CDS Tola_1948 NC_012691.1 2131524 2132141 R KEGG: aha:AHA_3221 TPR repeat-containing protein; hypothetical protein complement(2131524..2132141) Tolumonas auensis DSM 9187 7883241 YP_002893134.1 CDS Tola_1949 NC_012691.1 2132141 2132947 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_1093 short chain dehydrogenase; short chain dehydrogenase complement(2132141..2132947) Tolumonas auensis DSM 9187 7883242 YP_002893135.1 CDS Tola_1950 NC_012691.1 2132944 2133600 R KEGG: asa:ASA_1094 hypothetical protein; hypothetical protein complement(2132944..2133600) Tolumonas auensis DSM 9187 7883243 YP_002893136.1 CDS Tola_1951 NC_012691.1 2133597 2135036 R PFAM: AMP-dependent synthetase and ligase; KEGG: aha:AHA_3218 long-chain acyl-CoA synthetases; AMP-dependent synthetase and ligase complement(2133597..2135036) Tolumonas auensis DSM 9187 7883244 YP_002893137.1 CDS Tola_1952 NC_012691.1 2135033 2135674 R KEGG: aha:AHA_3217 thermostable hemolysin; thermostable hemolysin complement(2135033..2135674) Tolumonas auensis DSM 9187 7883245 YP_002893138.1 CDS Tola_1953 NC_012691.1 2135851 2137206 R KEGG: pfl:PFL_1403 sensory box-containing diguanylate cyclase, putative; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase complement(2135851..2137206) Tolumonas auensis DSM 9187 7883246 YP_002893139.1 CDS Tola_1954 NC_012691.1 2137284 2138525 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(2137284..2138525) Tolumonas auensis DSM 9187 7883247 YP_002893140.1 CDS Tola_1955 NC_012691.1 2138527 2139768 R PFAM: aminotransferase class V; KEGG: ypi:YpsIP31758_3186 aminotransferase, class V; class V aminotransferase complement(2138527..2139768) Tolumonas auensis DSM 9187 7883248 YP_002893141.1 CDS Tola_1956 NC_012691.1 2139782 2140600 R PFAM: protein of unknown function DUF81; KEGG: pha:PSHAa1469 hypothetical protein; hypothetical protein complement(2139782..2140600) Tolumonas auensis DSM 9187 7883249 YP_002893142.1 CDS Tola_1957 NC_012691.1 2140619 2142238 R PFAM: gamma-glutamyltranspeptidase; KEGG: pat:Patl_2054 gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(2140619..2142238) Tolumonas auensis DSM 9187 7883250 YP_002893143.1 CDS Tola_1958 NC_012691.1 2142225 2143427 R PFAM: Amidase; KEGG: cja:CJA_0574 amidase; amidase complement(2142225..2143427) Tolumonas auensis DSM 9187 7883251 YP_002893144.1 CDS Tola_1959 NC_012691.1 2143581 2144429 R PFAM: helix-turn-helix protein RpiR; KEGG: ypb:YPTS_0906 RpiR family transcriptional regulator; RpiR family transcriptional regulator complement(2143581..2144429) Tolumonas auensis DSM 9187 7883252 YP_002893145.1 CDS Tola_1960 NC_012691.1 2144461 2145153 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_0549 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2144461..2145153) Tolumonas auensis DSM 9187 7883253 YP_002893146.1 CDS Tola_1961 NC_012691.1 2145407 2146450 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_3268 ABC transporter related; ABC transporter 2145407..2146450 Tolumonas auensis DSM 9187 7883254 YP_002893147.1 CDS Tola_1962 NC_012691.1 2146473 2147762 D KEGG: atc:AGR_L_3443 putative spermidine/putrescine transport system substrate-binding protein; putative spermidine/putrescine transport system substrate-binding protein 2146473..2147762 Tolumonas auensis DSM 9187 7883255 YP_002893148.1 CDS Tola_1963 NC_012691.1 2147823 2148686 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component precursor; binding-protein-dependent transport system inner membrane protein 2147823..2148686 Tolumonas auensis DSM 9187 7883256 YP_002893149.1 CDS Tola_1964 NC_012691.1 2148686 2149522 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2148686..2149522 Tolumonas auensis DSM 9187 7883257 YP_002893150.1 CDS Tola_1965 NC_012691.1 2149515 2150207 D PFAM: Asp/Glu/hydantoin racemase; KEGG: rde:RD1_0861 hydantoin racemase; Asp/Glu/hydantoin racemase 2149515..2150207 Tolumonas auensis DSM 9187 7883258 YP_002893151.1 CDS Tola_1966 NC_012691.1 2150207 2151130 D KEGG: cak:Caul_3707 urate catabolism protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 2150207..2151130 Tolumonas auensis DSM 9187 7883259 YP_002893152.1 CDS Tola_1967 NC_012691.1 2151165 2151362 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: vsp:VS_0101 sec-independent protein translocase protein TatA homolog; twin-arginine translocation protein, TatA/E family subunit 2151165..2151362 Tolumonas auensis DSM 9187 7883260 YP_002893153.1 CDS Tola_1968 NC_012691.1 2151365 2151607 D TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: vco:VC0395_A2428 sec-independent translocase; twin-arginine translocation protein subunit TatB 2151365..2151607 Tolumonas auensis DSM 9187 7883261 YP_002893154.1 CDS Tola_1969 NC_012691.1 2151600 2152352 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: asa:ASA_4304 twin arginine translocation protein C; Sec-independent protein translocase subunit TatC 2151600..2152352 Tolumonas auensis DSM 9187 7883262 YP_002893155.1 CDS Tola_1970 NC_012691.1 2152593 2153504 R PFAM: ROK family protein; KEGG: cko:CKO_03789 D-allose kinase; D-allose kinase complement(2152593..2153504) Tolumonas auensis DSM 9187 7883263 YP_002893156.1 CDS Tola_1971 NC_012691.1 2153497 2154180 R PFAM: ribulose-phosphate 3-epimerase; KEGG: alsE; D-allulose-6-phosphate 3-epimerase; allulose-6-phosphate 3-epimerase complement(2153497..2154180) Tolumonas auensis DSM 9187 7883264 YP_002893157.1 CDS Tola_1972 NC_012691.1 2154189 2155169 R PFAM: inner-membrane translocator; KEGG: ecc:c5092 D-allose transporter subunit; D-allose transporter subunit complement(2154189..2155169) Tolumonas auensis DSM 9187 7883265 YP_002893158.1 CDS Tola_1973 NC_012691.1 2155148 2156677 R with AlsBC acts to import allose into the cell; AlsA contain 2 ATP-binding domains; D-allose transporter ATP-binding protein complement(2155148..2156677) Tolumonas auensis DSM 9187 7883266 YP_002893159.1 CDS Tola_1974 NC_012691.1 2156757 2157689 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4279 D-allose ABC transporter periplasmic-binding protein; D-allose transporter subunit complement(2156757..2157689) Tolumonas auensis DSM 9187 7883267 YP_002893160.1 CDS Tola_1975 NC_012691.1 2158266 2159144 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: hsm:HSM_0555 RpiR family transcriptional regulator; RpiR family transcriptional regulator complement(2158266..2159144) Tolumonas auensis DSM 9187 7883268 YP_002893161.1 CDS Tola_1976 NC_012691.1 2159279 2160871 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint; PTS system glucose-like transporter subunit IIB complement(2159279..2160871) Tolumonas auensis DSM 9187 7883269 YP_002893162.1 CDS Tola_1977 NC_012691.1 2160997 2161656 R KEGG: ect:ECIAI39_4378 hypothetical protein; hypothetical protein complement(2160997..2161656) Tolumonas auensis DSM 9187 7883270 YP_002893163.1 CDS Tola_1978 NC_012691.1 2161667 2162326 R KEGG: sat:SYN_01763 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2161667..2162326) Tolumonas auensis DSM 9187 7883271 YP_002893164.1 CDS Tola_1979 NC_012691.1 2162323 2162790 R KEGG: ecl:EcolC_3936 ribose 5-phosphate isomerase B; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase B complement(2162323..2162790) Tolumonas auensis DSM 9187 7883272 YP_002893165.1 CDS Tola_1980 NC_012691.1 2163295 2163669 R KEGG: har:HEAR3231 hypothetical protein; hypothetical protein complement(2163295..2163669) Tolumonas auensis DSM 9187 7883273 YP_002893166.1 CDS Tola_1981 NC_012691.1 2163944 2164723 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mmw:Mmwyl1_0449 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2163944..2164723 Tolumonas auensis DSM 9187 7883274 YP_002893167.1 CDS Tola_1982 NC_012691.1 2164737 2165405 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2431 ABC polar amino acid transporter inner membrane protein; polar amino acid ABC transporter inner membrane subunit 2164737..2165405 Tolumonas auensis DSM 9187 7883275 YP_002893168.1 CDS Tola_1983 NC_012691.1 2165402 2166058 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0934 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 2165402..2166058 Tolumonas auensis DSM 9187 7883276 YP_002893169.1 CDS Tola_1984 NC_012691.1 2166039 2166767 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pin:Ping_2429 ABC transporter for histidine/lysine/arginine/ornithine ATP-binding protein; ABC transporter 2166039..2166767 Tolumonas auensis DSM 9187 7883277 YP_002893170.1 CDS Tola_1985 NC_012691.1 2166858 2169239 R KEGG: pna:Pnap_4547 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: TRASH domain protein; heavy metal translocating P-type ATPase complement(2166858..2169239) Tolumonas auensis DSM 9187 7883278 YP_002893171.1 CDS Tola_1986 NC_012691.1 2169318 2170787 R PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: bcj:BCAL2733 putative multicopper oxidase; multicopper oxidase type 3 complement(2169318..2170787) Tolumonas auensis DSM 9187 7883279 YP_002893172.1 CDS Tola_1987 NC_012691.1 2170905 2171858 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B2748 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2170905..2171858) Tolumonas auensis DSM 9187 7883280 YP_002893173.1 CDS Tola_1988 NC_012691.1 2171970 2172269 D PFAM: protein of unknown function DUF1330; KEGG: msu:MS1420 hypothetical protein; hypothetical protein 2171970..2172269 Tolumonas auensis DSM 9187 7883281 YP_002893174.1 CDS Tola_1989 NC_012691.1 2172334 2172873 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: asu:Asuc_1305 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 2172334..2172873 Tolumonas auensis DSM 9187 7883282 YP_002893175.1 CDS Tola_1990 NC_012691.1 2172933 2173826 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xfa:XF1768 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2172933..2173826) Tolumonas auensis DSM 9187 7883283 YP_002893176.1 CDS Tola_1991 NC_012691.1 2173955 2174965 D PFAM: aldo/keto reductase; KEGG: bac:BamMC406_5053 aldo/keto reductase; aldo/keto reductase 2173955..2174965 Tolumonas auensis DSM 9187 7883284 YP_002893177.1 CDS Tola_1992 NC_012691.1 2175067 2175864 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bac:BamMC406_3786 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase 2175067..2175864 Tolumonas auensis DSM 9187 7883285 YP_002893178.1 CDS Tola_1993 NC_012691.1 2175936 2177099 R PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2654 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2175936..2177099) Tolumonas auensis DSM 9187 7883286 YP_002893179.1 CDS Tola_1994 NC_012691.1 2177301 2178194 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3099 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2177301..2178194) Tolumonas auensis DSM 9187 7883287 YP_002893180.1 CDS Tola_1995 NC_012691.1 2178410 2180044 D unknown function; putative glutamate synthase (NADPH) small subunit 2178410..2180044 Tolumonas auensis DSM 9187 7883288 YP_002893181.1 CDS Tola_1996 NC_012691.1 2180041 2183631 D TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aha:AHA_1497 pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 2180041..2183631 Tolumonas auensis DSM 9187 7883289 YP_002893182.1 CDS Tola_1997 NC_012691.1 2183723 2184139 R KEGG: dvl:Dvul_1186 hypothetical protein; hypothetical protein complement(2183723..2184139) Tolumonas auensis DSM 9187 7883290 YP_002893183.1 CDS Tola_1998 NC_012691.1 2184348 2186636 R KEGG: glo:Glov_1989 multi-sensor hybrid histidine kinase; TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; Hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain complement(2184348..2186636) Tolumonas auensis DSM 9187 7883291 YP_002893184.1 CDS Tola_1999 NC_012691.1 2186970 2187866 D KEGG: pin:Ping_2853 hypothetical protein; hypothetical protein 2186970..2187866 Tolumonas auensis DSM 9187 7883292 YP_002893185.1 CDS Tola_2000 NC_012691.1 2187866 2189539 D PFAM: ABC-1 domain protein; KEGG: xca:xccb100_2539 hypothetical protein; ABC transporter 2187866..2189539 Tolumonas auensis DSM 9187 7883293 YP_002893186.1 CDS Tola_2001 NC_012691.1 2189580 2190623 R PFAM: aldo/keto reductase; KEGG: mes:Meso_0448 aldo/keto reductase; aldo/keto reductase complement(2189580..2190623) Tolumonas auensis DSM 9187 7883294 YP_002893187.1 CDS Tola_2002 NC_012691.1 2190934 2191470 D PFAM: helix-turn-helix HxlR type; KEGG: reu:Reut_A0235 hypothetical protein; HxlR family transcriptional regulator 2190934..2191470 Tolumonas auensis DSM 9187 7883295 YP_002893188.1 CDS Tola_2003 NC_012691.1 2191473 2192750 D FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 2191473..2192750 Tolumonas auensis DSM 9187 7885838 YP_002893189.1 CDS Tola_2004 NC_012691.1 2192888 2194081 D SMART: PUA domain containing protein; KEGG: aha:AHA_2227 methyltransferase; PUA domain containing protein 2192888..2194081 Tolumonas auensis DSM 9187 7885839 YP_002893190.1 CDS cobT NC_012691.1 2194167 2195198 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2194167..2195198 Tolumonas auensis DSM 9187 7885840 YP_002893191.1 CDS Tola_2006 NC_012691.1 2195233 2195862 D PFAM: Phosphoglycerate mutase; KEGG: pat:Patl_1136 phosphoglycerate mutase; phosphoglycerate mutase 2195233..2195862 Tolumonas auensis DSM 9187 7885841 YP_002893192.1 CDS Tola_2007 NC_012691.1 2195876 2196481 D KEGG: vpa:VP2065 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2195876..2196481 Tolumonas auensis DSM 9187 7885842 YP_002893193.1 CDS Tola_2008 NC_012691.1 2196543 2197187 D PFAM: beta-lactamase domain protein; KEGG: aha:AHA_2221 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 2196543..2197187 Tolumonas auensis DSM 9187 7885843 YP_002893194.1 CDS Tola_2009 NC_012691.1 2197226 2198149 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_2527 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2197226..2198149) Tolumonas auensis DSM 9187 7885844 YP_002893195.1 CDS Tola_2010 NC_012691.1 2198288 2199649 D PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2523 glycoside hydrolase family protein; glycoside hydrolase family protein 2198288..2199649 Tolumonas auensis DSM 9187 7885845 YP_002893196.1 CDS Tola_2011 NC_012691.1 2199713 2200537 R PFAM: VacJ family lipoprotein; KEGG: aha:AHA_1402 lipoprotein VacJ; VacJ family lipoprotein complement(2199713..2200537) Tolumonas auensis DSM 9187 7885846 YP_002893197.1 CDS Tola_2012 NC_012691.1 2200699 2201130 R KEGG: asa:ASA_2603 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase complement(2200699..2201130) Tolumonas auensis DSM 9187 7885847 YP_002893198.1 CDS Tola_2013 NC_012691.1 2201319 2202614 R catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B complement(2201319..2202614) Tolumonas auensis DSM 9187 7885848 YP_002893199.1 CDS Tola_2014 NC_012691.1 2202701 2203039 R TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: asa:ASA_2606 ferredoxin; ferredoxin, 2Fe-2S type, ISC system complement(2202701..2203039) Tolumonas auensis DSM 9187 7885849 YP_002893200.1 CDS Tola_2015 NC_012691.1 2203039 2204889 R TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; KEGG: aha:AHA_1751 Fe-S protein assembly chaperone HscA; Fe-S protein assembly chaperone HscA complement(2203039..2204889) Tolumonas auensis DSM 9187 7885850 YP_002893201.1 CDS Tola_2016 NC_012691.1 2204938 2205453 R KEGG: ypm:YP_2562 co-chaperone HscB; TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; co-chaperone Hsc20 complement(2204938..2205453) Tolumonas auensis DSM 9187 7885851 YP_002893202.1 CDS Tola_2017 NC_012691.1 2205560 2205883 R TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: apa:APP7_0987 iron-binding protein IscA; iron-sulfur cluster assembly protein IscA complement(2205560..2205883) Tolumonas auensis DSM 9187 7885852 YP_002893203.1 CDS Tola_2018 NC_012691.1 2205909 2206295 R TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: aha:AHA_1748 scaffold protein; scaffold protein complement(2205909..2206295) Tolumonas auensis DSM 9187 7885853 YP_002893204.1 CDS Tola_2019 NC_012691.1 2206314 2207528 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(2206314..2207528) Tolumonas auensis DSM 9187 7885854 YP_002893205.1 CDS Tola_2020 NC_012691.1 2207532 2208047 R TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: asa:ASA_2613 ISC operon transcriptional regulator IscR; AsnC family transcriptional regulator complement(2207532..2208047) Tolumonas auensis DSM 9187 7885855 YP_002893206.1 CDS Tola_2021 NC_012691.1 2208121 2208852 R TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: aha:AHA_1745 RNA methyltransferase; RNA methyltransferase, TrmH family, group 1 complement(2208121..2208852) Tolumonas auensis DSM 9187 7885856 YP_002893207.1 CDS Tola_2022 NC_012691.1 2208893 2209417 R PFAM: Sterol-binding domain protein; KEGG: vvy:VV2689 putative lipid carrier protein; Sterol-binding domain-containing protein complement(2208893..2209417) Tolumonas auensis DSM 9187 7885857 YP_002893208.1 CDS Tola_2023 NC_012691.1 2209595 2210590 D PFAM: peptidase U32; KEGG: asa:ASA_2617 putative protease; peptidase U32 2209595..2210590 Tolumonas auensis DSM 9187 7885858 YP_002893209.1 CDS Tola_2024 NC_012691.1 2210600 2211469 D PFAM: peptidase U32; KEGG: aha:AHA_1741 collagenase; peptidase U32 2210600..2211469 Tolumonas auensis DSM 9187 7885859 YP_002893210.1 CDS Tola_2025 NC_012691.1 2211551 2212483 R lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI complement(2211551..2212483) Tolumonas auensis DSM 9187 7885860 YP_002893211.1 CDS Tola_2026 NC_012691.1 2212573 2212947 R PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aha:AHA_1739 rhodanese domain-containing protein; rhodanese domain-containing protein complement(2212573..2212947) Tolumonas auensis DSM 9187 7885861 YP_002893212.1 CDS Tola_2027 NC_012691.1 2213002 2213946 R TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: shl:Shal_1557 preprotein translocase subunit SecF; protein-export membrane protein SecF complement(2213002..2213946) Tolumonas auensis DSM 9187 7885862 YP_002893213.1 CDS Tola_2028 NC_012691.1 2213957 2215810 R TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aha:AHA_1737 protein-export membrane protein SecD; protein-export membrane protein SecD complement(2213957..2215810) Tolumonas auensis DSM 9187 7885863 YP_002893214.1 CDS Tola_2029 NC_012691.1 2215840 2216178 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: aha:AHA_1736 preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(2215840..2216178) Tolumonas auensis DSM 9187 7885864 YP_002893215.1 CDS Tola_2030 NC_012691.1 2216211 2217332 R KEGG: eca:ECA1120 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(2216211..2217332) Tolumonas auensis DSM 9187 7885865 YP_002893216.1 CDS Tola_2031 NC_012691.1 2217571 2218617 R TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: asa:ASA_2625 S-adenosylmethionine:trnaribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(2217571..2218617) Tolumonas auensis DSM 9187 7885866 YP_002893217.1 CDS Tola_2032 NC_012691.1 2218754 2219614 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: AGAP012778-PA; peptidase S1 and S6 chymotrypsin/Hap 2218754..2219614 Tolumonas auensis DSM 9187 7885867 YP_002893218.1 CDS Tola_2033 NC_012691.1 2219651 2220310 D KEGG: efe:EFER_2851 ribose 5-phosphate isomerase, constitutive; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2219651..2220310 Tolumonas auensis DSM 9187 7885868 YP_002893219.1 CDS Tola_2034 NC_012691.1 2220361 2221389 R PFAM: glycosyl transferase family 4; KEGG: pfl:PFL_4306 glycosyl transferase WbpL; glycosyl transferase family protein complement(2220361..2221389) Tolumonas auensis DSM 9187 7885869 YP_002893220.1 CDS Tola_2035 NC_012691.1 2221655 2222215 R KEGG: azo:azo1131 hypothetical protein; hypothetical protein complement(2221655..2222215) Tolumonas auensis DSM 9187 7885870 YP_002893221.1 CDS Tola_2036 NC_012691.1 2222286 2222585 R KEGG: tgr:Tgr7_1984 DNA polymerase beta subunit; DNA polymerase subunit beta complement(2222286..2222585) Tolumonas auensis DSM 9187 7885871 YP_002893222.1 CDS Tola_2037 NC_012691.1 2222585 2223076 R KEGG: mmw:Mmwyl1_0818 hypothetical protein; hypothetical protein complement(2222585..2223076) Tolumonas auensis DSM 9187 7885872 YP_002893223.1 CDS Tola_2038 NC_012691.1 2223339 2224598 R KEGG: fph:Fphi_0533 membrane protein of unknown function; hypothetical protein complement(2223339..2224598) Tolumonas auensis DSM 9187 7885873 YP_002893224.1 CDS Tola_2039 NC_012691.1 2225199 2226263 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: sde:Sde_2113 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(2225199..2226263) Tolumonas auensis DSM 9187 7885874 YP_002893225.1 CDS Tola_2040 NC_012691.1 2226279 2226827 R KEGG: hypothetical protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2226279..2226827) Tolumonas auensis DSM 9187 7885875 YP_002893226.1 CDS Tola_2041 NC_012691.1 2226837 2227718 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mfa:Mfla_2009 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(2226837..2227718) Tolumonas auensis DSM 9187 7885876 YP_002893227.1 CDS Tola_2042 NC_012691.1 2227742 2228641 R TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; KEGG: slo:Shew_1403 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(2227742..2228641) Tolumonas auensis DSM 9187 7885877 YP_002893228.1 CDS Tola_2043 NC_012691.1 2228650 2230347 R PFAM: O-antigen polymerase; KEGG: aha:AHA_2873 lipid A core - O-antigen ligase; O-antigen polymerase complement(2228650..2230347) Tolumonas auensis DSM 9187 7885878 YP_002893229.1 CDS Tola_2044 NC_012691.1 2230350 2231813 R KEGG: eta:ETA_13210 UDP-galactose-lipid carrier transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; UDP-phosphate galactose phosphotransferase complement(2230350..2231813) Tolumonas auensis DSM 9187 7885879 YP_002893230.1 CDS Tola_2045 NC_012691.1 2231893 2232843 R PFAM: glycosyl transferase family 2; KEGG: sew:SeSA_A2313 putative O antigen biosynthesis rhamnosyltransferase; family 2 glycosyl transferase complement(2231893..2232843) Tolumonas auensis DSM 9187 7885880 YP_002893231.1 CDS Tola_2046 NC_012691.1 2233127 2234239 R KEGG: ppd:Ppro_2105 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(2233127..2234239) Tolumonas auensis DSM 9187 7885881 YP_002893232.1 CDS Tola_2047 NC_012691.1 2234260 2235561 R KEGG: ftn:FTN_0431 hypothetical protein; hypothetical protein complement(2234260..2235561) Tolumonas auensis DSM 9187 7885882 YP_002893233.1 CDS Tola_2048 NC_012691.1 2235554 2236282 R PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3219 glycosyl transferase family protein; family 2 glycosyl transferase complement(2235554..2236282) Tolumonas auensis DSM 9187 7885883 YP_002893234.1 CDS Tola_2049 NC_012691.1 2236416 2237786 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; KEGG: ypg:YpAngola_A1256 phosphomannomutase; phosphomannomutase complement(2236416..2237786) Tolumonas auensis DSM 9187 7885884 YP_002893235.1 CDS Tola_2050 NC_012691.1 2237811 2239208 R KEGG: ypy:YPK_3181 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(2237811..2239208) Tolumonas auensis DSM 9187 7885885 YP_002893236.1 CDS Tola_2051 NC_012691.1 2239216 2239683 R PFAM: NUDIX hydrolase; KEGG: cko:CKO_00734 hypothetical protein; NUDIX hydrolase complement(2239216..2239683) Tolumonas auensis DSM 9187 7885886 YP_002893237.1 CDS Tola_2052 NC_012691.1 2239685 2240650 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ypy:YPK_3182 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2239685..2240650) Tolumonas auensis DSM 9187 7885887 YP_002893238.1 CDS Tola_2053 NC_012691.1 2240658 2241773 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: sbc:SbBS512_E1179 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(2240658..2241773) Tolumonas auensis DSM 9187 7885888 YP_002893239.1 CDS Tola_2054 NC_012691.1 2241775 2243007 R PFAM: polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 cytosol aminopeptidase; polysaccharide biosynthesis protein complement(2241775..2243007) Tolumonas auensis DSM 9187 7885889 YP_002893240.1 CDS Tola_2055 NC_012691.1 2243045 2244163 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: msu:MS0655 hypothetical protein; lipopolysaccharide biosynthesis protein complement(2243045..2244163) Tolumonas auensis DSM 9187 7885890 YP_002893241.1 CDS Tola_2056 NC_012691.1 2244341 2245354 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: aha:AHA_1113 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(2244341..2245354) Tolumonas auensis DSM 9187 7885891 YP_002893242.1 CDS Tola_2057 NC_012691.1 2245555 2245893 R PFAM: DNA polymerase beta domain protein region; KEGG: lpf:lpl2848 hypothetical protein; DNA polymerase beta domain-containing protein complement(2245555..2245893) Tolumonas auensis DSM 9187 7885892 YP_002893243.1 CDS Tola_2058 NC_012691.1 2245890 2246309 R TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: lpf:lpl2847 hypothetical protein; nucleotidyltransferase substrate binding protein complement(2245890..2246309) Tolumonas auensis DSM 9187 7885893 YP_002893244.1 CDS Tola_2059 NC_012691.1 2246479 2247171 R regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU complement(2246479..2247171) Tolumonas auensis DSM 9187 7885894 YP_002893245.1 CDS Tola_2060 NC_012691.1 2247190 2248008 R KEGG: aha:AHA_2811 phosphate ABC transporter, ATP-binding protein PstB; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(2247190..2248008) Tolumonas auensis DSM 9187 7885895 YP_002893246.1 CDS Tola_2061 NC_012691.1 2248052 2249698 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_1520 ABC-type phosphate transporter, permease component; phosphate ABC transporter permease complement(2248052..2249698) Tolumonas auensis DSM 9187 7885896 YP_002893247.1 CDS Tola_2062 NC_012691.1 2249722 2251959 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_1519 ABC-type phosphate transporter, permease component; binding-protein-dependent transport system inner membrane protein complement(2249722..2251959) Tolumonas auensis DSM 9187 7885897 YP_002893248.1 CDS Tola_2063 NC_012691.1 2252193 2254265 D PFAM: Polyphosphate kinase; KEGG: aha:AHA_2829 polyphosphate kinase; polyphosphate kinase 2252193..2254265 Tolumonas auensis DSM 9187 7885898 YP_002893249.1 CDS Tola_2064 NC_012691.1 2254255 2255745 D PFAM: Ppx/GppA phosphatase; KEGG: aha:AHA_2830 exopolyphosphatase; Ppx/GppA phosphatase 2254255..2255745 Tolumonas auensis DSM 9187 7885899 YP_002893250.1 CDS Tola_2065 NC_012691.1 2255759 2256253 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: aha:AHA_2814 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase complement(2255759..2256253) Tolumonas auensis DSM 9187 7885900 YP_002893251.1 CDS Tola_2066 NC_012691.1 2256387 2257361 R TIGRFAM: phosphate binding protein; KEGG: aha:AHA_1255 phosphate-binding protein; phosphate binding protein complement(2256387..2257361) Tolumonas auensis DSM 9187 7885901 YP_002893252.1 CDS Tola_2067 NC_012691.1 2257462 2258760 R KEGG: aha:AHA_1254 phosphate regulon sensor protein PhoR; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase complement(2257462..2258760) Tolumonas auensis DSM 9187 7885902 YP_002893253.1 CDS Tola_2068 NC_012691.1 2258769 2259458 R KEGG: aha:AHA_1253 phosphate regulon transcriptional regulatory protein PhoB; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB complement(2258769..2259458) Tolumonas auensis DSM 9187 7885903 YP_002893254.1 CDS Tola_2069 NC_012691.1 2259542 2263303 R PFAM: SMC domain protein; KEGG: aha:AHA_3045 exonuclease SbcC; SMC domain-containing protein complement(2259542..2263303) Tolumonas auensis DSM 9187 7885904 YP_002893255.1 CDS Tola_2070 NC_012691.1 2263300 2264535 R TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: asa:ASA_3068 exonuclease SbcD; nuclease SbcCD subunit D complement(2263300..2264535) Tolumonas auensis DSM 9187 7885905 YP_002893256.1 CDS Tola_2071 NC_012691.1 2264596 2265027 R PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_3069 acetyltransferase; N-acetyltransferase GCN5 complement(2264596..2265027) Tolumonas auensis DSM 9187 7885906 YP_002893257.1 CDS rdgC NC_012691.1 2265191 2266099 D Required for efficient pilin antigenic variation; recombination associated protein 2265191..2266099 Tolumonas auensis DSM 9187 7885907 YP_002893258.1 CDS Tola_2073 NC_012691.1 2266276 2267640 D PFAM: peptidase U32; KEGG: asa:ASA_3284 U32 family peptidase; peptidase U32 2266276..2267640 Tolumonas auensis DSM 9187 7885908 YP_002893259.1 CDS Tola_2074 NC_012691.1 2267641 2267895 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: saz:Sama_1002 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin 2267641..2267895 Tolumonas auensis DSM 9187 7885909 YP_002893260.1 CDS Tola_2075 NC_012691.1 2267896 2268138 D PFAM: glutaredoxin; KEGG: cko:CKO_02258 glutaredoxin 1; glutaredoxin 2267896..2268138 Tolumonas auensis DSM 9187 7885910 YP_002893261.1 CDS Tola_2076 NC_012691.1 2268292 2269095 D PFAM: inositol monophosphatase; KEGG: aha:AHA_1710 inositol-1-monophosphatase; inositol monophosphatase 2268292..2269095 Tolumonas auensis DSM 9187 7885911 YP_002893262.1 CDS Tola_2077 NC_012691.1 2269118 2270269 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bba:Bd0311 benzoate membrane transport protein; benzoate transporter complement(2269118..2270269) Tolumonas auensis DSM 9187 7885912 YP_002893263.1 CDS Tola_2078 NC_012691.1 2270430 2270990 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: she:Shewmr4_0324 XRE family transcriptional regulator; XRE family transcriptional regulator 2270430..2270990 Tolumonas auensis DSM 9187 7885913 YP_002893264.1 CDS Tola_2079 NC_012691.1 2271106 2273082 D KEGG: bph:Bphy_3794 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 2271106..2273082 Tolumonas auensis DSM 9187 7885914 YP_002893265.1 CDS Tola_2080 NC_012691.1 2273083 2273901 R PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: ypb:YPTS_2538 shikimate dehydrogenase substrate binding subunit; shikimate dehydrogenase complement(2273083..2273901) Tolumonas auensis DSM 9187 7885915 YP_002893266.1 CDS Tola_2081 NC_012691.1 2273981 2275351 R PFAM: major facilitator superfamily MFS_1; KEGG: plu:plu3880 hypothetical protein; major facilitator superfamily protein complement(2273981..2275351) Tolumonas auensis DSM 9187 7885916 YP_002893267.1 CDS Tola_2082 NC_012691.1 2275389 2276279 R TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: sgl:SG0663 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase complement(2275389..2276279) Tolumonas auensis DSM 9187 7885917 YP_002893268.1 CDS Tola_2083 NC_012691.1 2276291 2276620 R TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: sfv:SFV_0400 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV complement(2276291..2276620) Tolumonas auensis DSM 9187 7885918 YP_002893269.1 CDS Tola_2084 NC_012691.1 2276620 2277234 R TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: ses:SARI_02493 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III complement(2276620..2277234) Tolumonas auensis DSM 9187 7883656 YP_002893270.1 CDS Tola_2085 NC_012691.1 2277224 2279215 R KEGG: yen:YE3142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(2277224..2279215) Tolumonas auensis DSM 9187 7883657 YP_002893271.1 CDS Tola_2086 NC_012691.1 2279219 2280157 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; KEGG: mfa:Mfla_1295 ubiquinol oxidase, subunit II; ubiquinol oxidase subunit II complement(2279219..2280157) Tolumonas auensis DSM 9187 7883658 YP_002893272.1 CDS Tola_2087 NC_012691.1 2280488 2281606 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: azo:azo2200 HD-domain-containing protein; metal dependent phosphohydrolase 2280488..2281606 Tolumonas auensis DSM 9187 7883659 YP_002893273.1 CDS Tola_2088 NC_012691.1 2281620 2282936 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: asa:ASA_3820 CBS domain-containing protein; hypothetical protein complement(2281620..2282936) Tolumonas auensis DSM 9187 7883660 YP_002893274.1 CDS Tola_2089 NC_012691.1 2283570 2284163 D PFAM: protein of unknown function UPF0016; KEGG: dar:Daro_2248 hypothetical protein; hypothetical protein 2283570..2284163 Tolumonas auensis DSM 9187 7883663 YP_002893275.1 CDS Tola_2090 NC_012691.1 2284200 2285021 R PFAM: CHAD domain containing protein; KEGG: bpy:Bphyt_4307 CHAD domain containing protein; CHAD domain-containing protein complement(2284200..2285021) Tolumonas auensis DSM 9187 7883664 YP_002893276.1 CDS Tola_2091 NC_012691.1 2285314 2287215 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRA2715 putative PTS system, fructose-specific IIABC component; PTS system fructose subfamily transporter subunit IIC 2285314..2287215 Tolumonas auensis DSM 9187 7883665 YP_002893277.1 CDS Tola_2092 NC_012691.1 2287287 2288363 R PFAM: Radical SAM domain protein; KEGG: hch:HCH_05222 pyruvate-formate lyase-activating enzyme; radical SAM protein complement(2287287..2288363) Tolumonas auensis DSM 9187 7883666 YP_002893278.1 CDS Tola_2093 NC_012691.1 2288420 2289196 D PFAM: protein of unknown function DUF52; KEGG: dar:Daro_1971 hypothetical protein; hypothetical protein 2288420..2289196 Tolumonas auensis DSM 9187 7883667 YP_002893279.1 CDS Tola_2094 NC_012691.1 2289174 2289764 D PFAM: AMMECR1 domain protein; KEGG: shl:Shal_0948 AMMECR1 domain-containing protein; AMMECR1 domain-containing protein 2289174..2289764 Tolumonas auensis DSM 9187 7883668 YP_002893280.1 CDS Tola_2095 NC_012691.1 2289812 2290768 R KEGG: asa:ASA_3144 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(2289812..2290768) Tolumonas auensis DSM 9187 7883669 YP_002893281.1 CDS Tola_2096 NC_012691.1 2290786 2294268 R KEGG: aha:AHA_1188 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(2290786..2294268) Tolumonas auensis DSM 9187 7883670 YP_002893282.1 CDS Tola_2097 NC_012691.1 2294281 2294874 R PFAM: ribonuclease HII/HIII; KEGG: cko:CKO_03183 ribonuclease HII; Ribonuclease H complement(2294281..2294874) Tolumonas auensis DSM 9187 7883671 YP_002893283.1 CDS Tola_2098 NC_012691.1 2294871 2296052 R KEGG: aha:AHA_1186 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase complement(2294871..2296052) Tolumonas auensis DSM 9187 7883672 YP_002893284.1 CDS Tola_2099 NC_012691.1 2296027 2296818 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2296027..2296818) Tolumonas auensis DSM 9187 7883673 YP_002893285.1 CDS fabZ NC_012691.1 2296829 2297284 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2296829..2297284) Tolumonas auensis DSM 9187 7883674 YP_002893286.1 CDS lpxD NC_012691.1 2297297 2298325 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2297297..2298325) Tolumonas auensis DSM 9187 7883675 YP_002893287.1 CDS Tola_2102 NC_012691.1 2298329 2298847 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: aha:AHA_1182 outer membrane protein; outer membrane chaperone Skp complement(2298329..2298847) Tolumonas auensis DSM 9187 7883676 YP_002893288.1 CDS Tola_2103 NC_012691.1 2298872 2301295 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: aha:AHA_1181 OMP85 family outer membrane protein; outer membrane protein assembly complex, YaeT protein complement(2298872..2301295) Tolumonas auensis DSM 9187 7883677 YP_002893289.1 CDS Tola_2104 NC_012691.1 2301322 2302671 R KEGG: vha:VIBHAR_03230 protease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(2301322..2302671) Tolumonas auensis DSM 9187 7883678 YP_002893290.1 CDS Tola_2105 NC_012691.1 2302668 2303864 R KEGG: vha:VIBHAR_03231 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2302668..2303864) Tolumonas auensis DSM 9187 7883679 YP_002893291.1 CDS Tola_2106 NC_012691.1 2303875 2304720 R PFAM: phosphatidate cytidylyltransferase; KEGG: aha:AHA_1178 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2303875..2304720) Tolumonas auensis DSM 9187 7883680 YP_002893292.1 CDS Tola_2107 NC_012691.1 2304739 2305518 R KEGG: aha:AHA_1177 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase complement(2304739..2305518) Tolumonas auensis DSM 9187 7883681 YP_002893293.1 CDS frr NC_012691.1 2305588 2306145 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2305588..2306145) Tolumonas auensis DSM 9187 7883682 YP_002893294.1 CDS pyrH NC_012691.1 2306221 2306955 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2306221..2306955) Tolumonas auensis DSM 9187 7883683 YP_002893295.1 CDS tsf NC_012691.1 2307023 2307901 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2307023..2307901) Tolumonas auensis DSM 9187 7883684 YP_002893296.1 CDS rpsB NC_012691.1 2307999 2308727 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2307999..2308727) Tolumonas auensis DSM 9187 7883685 YP_002893297.1 CDS Tola_2112 NC_012691.1 2308802 2308903 D hypothetical protein 2308802..2308903 Tolumonas auensis DSM 9187 7883686 YP_002893298.1 CDS Tola_2113 NC_012691.1 2309038 2309829 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pha:PSHAa2037 methionine aminopeptidase; contains a divalent metal, usually cobalt; methionine aminopeptidase 2309038..2309829 Tolumonas auensis DSM 9187 7883687 YP_002893299.1 CDS Tola_2114 NC_012691.1 2309880 2312516 D KEGG: aha:AHA_1171 protein-P-II uridylyltransferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; DNA polymerase beta domain protein region; amino acid-binding ACT domain protein; protein of unknown function DUF294 nucleotidyltransferase putative; SMART: metal-dependent phosphohydrolase HD region; UTP-GlnB uridylyltransferase, GlnD 2309880..2312516 Tolumonas auensis DSM 9187 7883688 YP_002893300.1 CDS dapD NC_012691.1 2312548 2313375 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2312548..2313375 Tolumonas auensis DSM 9187 7883689 YP_002893301.1 CDS Tola_2116 NC_012691.1 2313557 2314576 D PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: kpn:KPN_04202 repressor of galETK operon; transcriptional regulator, LacI family 2313557..2314576 Tolumonas auensis DSM 9187 7883690 YP_002893302.1 CDS Tola_2117 NC_012691.1 2314756 2316873 D PFAM: glycoside hydrolase clan GH-D; KEGG: eca:ECA0754 alpha-galactosidase; glycoside hydrolase clan GH-D 2314756..2316873 Tolumonas auensis DSM 9187 7883691 YP_002893303.1 CDS Tola_2118 NC_012691.1 2316993 2319044 D PFAM: extracellular solute-binding protein family 5; KEGG: ret:RHE_PE00090 alpha-galactoside ABC transporter, substrate-binding protein; family 5 extracellular solute-binding protein 2316993..2319044 Tolumonas auensis DSM 9187 7883692 YP_002893304.1 CDS Tola_2119 NC_012691.1 2319247 2320245 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_441 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 2319247..2320245 Tolumonas auensis DSM 9187 7883693 YP_002893305.1 CDS Tola_2120 NC_012691.1 2320273 2321397 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_440 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 2320273..2321397 Tolumonas auensis DSM 9187 7883694 YP_002893306.1 CDS Tola_2121 NC_012691.1 2321412 2323031 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SM_b21644 putative ABC transporter ATP-binding protein; ABC transporter 2321412..2323031 Tolumonas auensis DSM 9187 7883695 YP_002893307.1 CDS Tola_2122 NC_012691.1 2323067 2324071 D PFAM: aldo/keto reductase; KEGG: spe:Spro_3413 aldo/keto reductase; aldo/keto reductase 2323067..2324071 Tolumonas auensis DSM 9187 7883696 YP_002893308.1 CDS Tola_2123 NC_012691.1 2324097 2324999 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ecf:ECH74115_5632 melibiose operon regulatory protein; DNA-binding transcriptional regulator MelR 2324097..2324999 Tolumonas auensis DSM 9187 7883697 YP_002893309.1 CDS Tola_2124 NC_012691.1 2325030 2326346 R PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein; glycoside hydrolase family protein complement(2325030..2326346) Tolumonas auensis DSM 9187 7883698 YP_002893310.1 CDS Tola_2125 NC_012691.1 2326487 2327017 R PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0498 Pab N-terminal acetyltransferase; N-acetyltransferase GCN5 complement(2326487..2327017) Tolumonas auensis DSM 9187 7883699 YP_002893311.1 CDS Tola_2126 NC_012691.1 2327046 2327609 R KEGG: nmn:NMCC_0196 hypothetical protein; hypothetical protein complement(2327046..2327609) Tolumonas auensis DSM 9187 7883700 YP_002893312.1 CDS metH NC_012691.1 2327827 2331540 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(2327827..2331540) Tolumonas auensis DSM 9187 7883701 YP_002893313.1 CDS Tola_2128 NC_012691.1 2331657 2332604 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(2331657..2332604) Tolumonas auensis DSM 9187 7883702 YP_002893314.1 CDS Tola_2129 NC_012691.1 2332992 2334149 D PFAM: molybdopterin binding domain; KEGG: aha:AHA_0487 competence/damage-inducible protein CinA; molybdopterin binding domain-containing protein 2332992..2334149 Tolumonas auensis DSM 9187 7883703 YP_002893315.1 CDS Tola_2130 NC_012691.1 2334201 2334491 R PFAM: YCII-related; KEGG: dps:DP2485 hypothetical protein; YCII-like protein complement(2334201..2334491) Tolumonas auensis DSM 9187 7883704 YP_002893316.1 CDS Tola_2131 NC_012691.1 2334564 2335106 D PFAM: GCN5-related N-acetyltransferase; KEGG: mch:Mchl_4875 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2334564..2335106 Tolumonas auensis DSM 9187 7883705 YP_002893317.1 CDS Tola_2132 NC_012691.1 2335096 2335875 R PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: aha:AHA_1003 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA; Peptidylprolyl isomerase complement(2335096..2335875) Tolumonas auensis DSM 9187 7883706 YP_002893318.1 CDS Tola_2133 NC_012691.1 2336046 2336270 D PFAM: SlyX family protein; KEGG: asa:ASA_3298 SlyX protein; SlyX family protein 2336046..2336270 Tolumonas auensis DSM 9187 7883707 YP_002893319.1 CDS Tola_2134 NC_012691.1 2336349 2338010 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(2336349..2338010) Tolumonas auensis DSM 9187 7883708 YP_002893320.1 CDS Tola_2135 NC_012691.1 2338223 2339725 R TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vvy:VV1012 PTS system, N-acetylglucosamine-specific IIABC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(2338223..2339725) Tolumonas auensis DSM 9187 7883709 YP_002893321.1 CDS nagB NC_012691.1 2339913 2340713 D catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 2339913..2340713 Tolumonas auensis DSM 9187 7883710 YP_002893322.1 CDS nagA NC_012691.1 2340724 2341875 D catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 2340724..2341875 Tolumonas auensis DSM 9187 7883711 YP_002893323.1 CDS Tola_2138 NC_012691.1 2341872 2343086 D PFAM: ROK family protein; KEGG: asa:ASA_2830 N-acetylglucosamine repressor; ROK family protein 2341872..2343086 Tolumonas auensis DSM 9187 7883712 YP_002893324.1 CDS Tola_2139 NC_012691.1 2343251 2343580 D PFAM: protein of unknown function DUF413; KEGG: asa:ASA_2701 hypothetical protein; hypothetical protein 2343251..2343580 Tolumonas auensis DSM 9187 7883713 YP_002893325.1 CDS Tola_2140 NC_012691.1 2343580 2344437 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aha:AHA_1656 LysR family transcriptional regulator; LysR family transcriptional regulator 2343580..2344437 Tolumonas auensis DSM 9187 7883714 YP_002893326.1 CDS Tola_2141 NC_012691.1 2344434 2345441 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU10840 LacI family transcription regulator; transcriptional regulator, LacI family complement(2344434..2345441) Tolumonas auensis DSM 9187 7883715 YP_002893327.1 CDS Tola_2142 NC_012691.1 2345456 2346916 R PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase; Glycosyl hydrolase family 32 domain-containing protein complement(2345456..2346916) Tolumonas auensis DSM 9187 7883716 YP_002893328.1 CDS Tola_2143 NC_012691.1 2347123 2347680 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: aha:AHA_2848 phosphodiesterase; phosphodiesterase, MJ0936 family complement(2347123..2347680) Tolumonas auensis DSM 9187 7883717 YP_002893329.1 CDS Tola_2144 NC_012691.1 2347766 2348008 R PFAM: Protein of unknown function DUF1920; KEGG: aha:AHA_2742 LuxR family transcriptional regulator; hypothetical protein complement(2347766..2348008) Tolumonas auensis DSM 9187 7883718 YP_002893330.1 CDS Tola_2145 NC_012691.1 2348005 2350284 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Miro domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: aha:AHA_2743 ferrous iron transport protein B; ferrous iron transport protein B complement(2348005..2350284) Tolumonas auensis DSM 9187 7883719 YP_002893331.1 CDS Tola_2146 NC_012691.1 2350281 2350508 R PFAM: FeoA family protein; KEGG: asa:ASA_1629 ferrous iron transport protein A; FeoA family protein complement(2350281..2350508) Tolumonas auensis DSM 9187 7883720 YP_002893332.1 CDS Tola_2147 NC_012691.1 2350687 2353062 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(2350687..2353062) Tolumonas auensis DSM 9187 7883721 YP_002893333.1 CDS Tola_2148 NC_012691.1 2353069 2353533 R KEGG: asa:ASA_2560 hypothetical protein; hypothetical protein complement(2353069..2353533) Tolumonas auensis DSM 9187 7883722 YP_002893334.1 CDS Tola_2149 NC_012691.1 2353653 2354327 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pha:PSHAa2178 enzymatic protein; HAD-superfamily hydrolase complement(2353653..2354327) Tolumonas auensis DSM 9187 7883723 YP_002893335.1 CDS Tola_2150 NC_012691.1 2354464 2355792 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2354464..2355792 Tolumonas auensis DSM 9187 7883724 YP_002893336.1 CDS Tola_2151 NC_012691.1 2356403 2357758 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 2356403..2357758 Tolumonas auensis DSM 9187 7883725 YP_002893337.1 CDS Tola_2152 NC_012691.1 2357822 2358136 R PFAM: branched-chain amino acid transport; KEGG: hch:HCH_00879 hypothetical protein; branched-chain amino acid transport complement(2357822..2358136) Tolumonas auensis DSM 9187 7883726 YP_002893338.1 CDS Tola_2153 NC_012691.1 2358133 2358879 R PFAM: AzlC family protein; KEGG: hch:HCH_00878 branched-chain amino acid permease (azaleucine resistance); AzlC family protein complement(2358133..2358879) Tolumonas auensis DSM 9187 7883727 YP_002893339.1 CDS Tola_2154 NC_012691.1 2358907 2359428 D PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet1561 acetyltransferase; N-acetyltransferase GCN5 2358907..2359428 Tolumonas auensis DSM 9187 7883728 YP_002893340.1 CDS Tola_2155 NC_012691.1 2359429 2360298 R positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; AraC family transcriptional regulator complement(2359429..2360298) Tolumonas auensis DSM 9187 7883729 YP_002893341.1 CDS araH NC_012691.1 2360528 2361526 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(2360528..2361526) Tolumonas auensis DSM 9187 7883730 YP_002893342.1 CDS araG NC_012691.1 2361565 2363064 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(2361565..2363064) Tolumonas auensis DSM 9187 7883731 YP_002893343.1 CDS Tola_2158 NC_012691.1 2363122 2364105 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: asa:ASA_2396 ABC-type arabinose transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2363122..2364105) Tolumonas auensis DSM 9187 7883732 YP_002893344.1 CDS Tola_2159 NC_012691.1 2364259 2364432 R hypothetical protein complement(2364259..2364432) Tolumonas auensis DSM 9187 7883733 YP_002893345.1 CDS Tola_2160 NC_012691.1 2364473 2366149 D catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2364473..2366149 Tolumonas auensis DSM 9187 7883734 YP_002893346.1 CDS araD NC_012691.1 2366146 2366844 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2366146..2366844 Tolumonas auensis DSM 9187 7883735 YP_002893347.1 CDS Tola_2162 NC_012691.1 2366862 2368361 D catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2366862..2368361 Tolumonas auensis DSM 9187 7883736 YP_002893348.1 CDS Tola_2163 NC_012691.1 2368569 2369522 D KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 2368569..2369522 Tolumonas auensis DSM 9187 7883737 YP_002893349.1 CDS Tola_2164 NC_012691.1 2369748 2371748 D TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: vvu:VV2_0553 transketolase; transketolase 2369748..2371748 Tolumonas auensis DSM 9187 7883738 YP_002893350.1 CDS Tola_2165 NC_012691.1 2371807 2373459 R TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: aha:AHA_3492 hypothetical protein; hypothetical protein complement(2371807..2373459) Tolumonas auensis DSM 9187 7883739 YP_002893351.1 CDS Tola_2166 NC_012691.1 2373689 2374069 D KEGG: slo:Shew_0489 hypothetical protein; hypothetical protein 2373689..2374069 Tolumonas auensis DSM 9187 7883740 YP_002893352.1 CDS Tola_2167 NC_012691.1 2374096 2374371 D PFAM: protein of unknown function DUF1289; KEGG: vha:VIBHAR_02667 hypothetical protein; hypothetical protein 2374096..2374371 Tolumonas auensis DSM 9187 7883741 YP_002893353.1 CDS Tola_2168 NC_012691.1 2374389 2375753 R PFAM: tyrosine protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: bxe:Bxe_B0557 serine/threonine protein kinase; serine/threonine protein kinase complement(2374389..2375753) Tolumonas auensis DSM 9187 7883742 YP_002893354.1 CDS Tola_2169 NC_012691.1 2375837 2377054 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1573 transporter; Bcr/CflA subfamily drug resistance transporter complement(2375837..2377054) Tolumonas auensis DSM 9187 7883743 YP_002893355.1 CDS Tola_2170 NC_012691.1 2377385 2377624 R hypothetical protein complement(2377385..2377624) Tolumonas auensis DSM 9187 7883744 YP_002893356.1 CDS guaA NC_012691.1 2377754 2379331 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2377754..2379331) Tolumonas auensis DSM 9187 7883745 YP_002893357.1 CDS Tola_2172 NC_012691.1 2379428 2380891 R KEGG: aha:AHA_1989 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein; inosine-5'-monophosphate dehydrogenase complement(2379428..2380891) Tolumonas auensis DSM 9187 7883746 YP_002893358.1 CDS Tola_2173 NC_012691.1 2381067 2382413 D KEGG: asa:ASA_1863 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 2381067..2382413 Tolumonas auensis DSM 9187 7883747 YP_002893359.1 CDS Tola_2174 NC_012691.1 2382410 2382808 R PFAM: thioesterase superfamily protein; KEGG: asa:ASA_2794 acyl-CoA thioester hydrolase; thioesterase superfamily protein complement(2382410..2382808) Tolumonas auensis DSM 9187 7883748 YP_002893360.1 CDS Tola_2175 NC_012691.1 2382936 2383574 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: asa:ASA_1697 hypothetical protein; hypothetical protein complement(2382936..2383574) Tolumonas auensis DSM 9187 7883749 YP_002893361.1 CDS Tola_2176 NC_012691.1 2384195 2386864 D PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: aha:AHA_2616 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2384195..2386864 Tolumonas auensis DSM 9187 7883750 YP_002893362.1 CDS Tola_2177 NC_012691.1 2386987 2387709 R NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A complement(2386987..2387709) Tolumonas auensis DSM 9187 7883751 YP_002893363.1 CDS Tola_2178 NC_012691.1 2387900 2388655 D PFAM: Integral membrane protein TerC; KEGG: aha:AHA_1890 TerC protein; integral membrane protein TerC 2387900..2388655 Tolumonas auensis DSM 9187 7883752 YP_002893364.1 CDS Tola_2179 NC_012691.1 2388740 2389828 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2388740..2389828) Tolumonas auensis DSM 9187 7883753 YP_002893365.1 CDS Tola_2180 NC_012691.1 2389836 2390771 R KEGG: asa:ASA_1931 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; HemK family modification methylase complement(2389836..2390771) Tolumonas auensis DSM 9187 7883754 YP_002893366.1 CDS Tola_2181 NC_012691.1 2390849 2391373 D PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: cko:CKO_00454 hypothetical protein; Smr protein/MutS2 2390849..2391373 Tolumonas auensis DSM 9187 7883755 YP_002893367.1 CDS Tola_2182 NC_012691.1 2391405 2391611 R PFAM: protein of unknown function DUF1107; KEGG: aha:AHA_1999 hypothetical protein; hypothetical protein complement(2391405..2391611) Tolumonas auensis DSM 9187 7883756 YP_002893368.1 CDS Tola_2183 NC_012691.1 2391735 2392193 R TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: aha:AHA_1998 phosphohistidine phosphatase SixA; phosphohistidine phosphatase, SixA complement(2391735..2392193) Tolumonas auensis DSM 9187 7883757 YP_002893369.1 CDS Tola_2184 NC_012691.1 2392333 2395122 D PFAM: peptidase M16 domain protein; KEGG: asa:ASA_1875 insulinase; peptidase M16 domain-containing protein 2392333..2395122 Tolumonas auensis DSM 9187 7883758 YP_002893370.1 CDS Tola_2185 NC_012691.1 2395144 2395920 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: asa:ASA_2047 Mg-dependent deoxyribonuclease; TatD family hydrolase complement(2395144..2395920) Tolumonas auensis DSM 9187 7883759 YP_002893371.1 CDS Tola_2186 NC_012691.1 2395924 2396883 R KEGG: aha:AHA_2257 DNA polymerase III, delta' subunit; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit; DNA polymerase III, delta prime subunit complement(2395924..2396883) Tolumonas auensis DSM 9187 7883760 YP_002893372.1 CDS Tola_2187 NC_012691.1 2396868 2397497 R KEGG: aha:AHA_2256 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(2396868..2397497) Tolumonas auensis DSM 9187 7883761 YP_002893373.1 CDS Tola_2188 NC_012691.1 2397498 2398550 R PFAM: aminodeoxychorismate lyase; KEGG: asa:ASA_2050 hypothetical protein; aminodeoxychorismate lyase complement(2397498..2398550) Tolumonas auensis DSM 9187 7883762 YP_002893374.1 CDS Tola_2189 NC_012691.1 2398486 2399295 R TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; KEGG: asa:ASA_2051 4-amino-4-deoxychorismate lyase; aminodeoxychorismate lyase complement(2398486..2399295) Tolumonas auensis DSM 9187 7883763 YP_002893375.1 CDS Tola_2190 NC_012691.1 2399361 2400602 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: aha:AHA_2253 beta-ketoacyl-acyl carrier protein synthase II; 3-oxoacyl-ACP synthase complement(2399361..2400602) Tolumonas auensis DSM 9187 7883764 YP_002893376.1 CDS Tola_2191 NC_012691.1 2400683 2400919 R TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: asa:ASA_2053 acyl carrier protein; acyl carrier protein complement(2400683..2400919) Tolumonas auensis DSM 9187 7883765 YP_002893377.1 CDS Tola_2192 NC_012691.1 2401068 2401802 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cko:CKO_01965 3-ketoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase complement(2401068..2401802) Tolumonas auensis DSM 9187 7883766 YP_002893378.1 CDS Tola_2193 NC_012691.1 2401814 2402749 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: aha:AHA_2250 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2401814..2402749) Tolumonas auensis DSM 9187 7883767 YP_002893379.1 CDS Tola_2194 NC_012691.1 2402767 2403723 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2402767..2403723) Tolumonas auensis DSM 9187 7883768 YP_002893380.1 CDS Tola_2195 NC_012691.1 2403732 2404751 R TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: aha:AHA_2248 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX complement(2403732..2404751) Tolumonas auensis DSM 9187 7883769 YP_002893381.1 CDS rpmF NC_012691.1 2404775 2404939 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2404775..2404939) Tolumonas auensis DSM 9187 7883770 YP_002893382.1 CDS Tola_2197 NC_012691.1 2404960 2405481 R PFAM: protein of unknown function DUF177; KEGG: aha:AHA_2246 hypothetical protein; hypothetical protein complement(2404960..2405481) Tolumonas auensis DSM 9187 7883771 YP_002893383.1 CDS Tola_2198 NC_012691.1 2405533 2406120 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: aha:AHA_2242 septum formation protein Maf; maf protein 2405533..2406120 Tolumonas auensis DSM 9187 7883772 YP_002893384.1 CDS Tola_2199 NC_012691.1 2406163 2406825 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_2241 HAD family hydrolase; HAD-superfamily hydrolase complement(2406163..2406825) Tolumonas auensis DSM 9187 7883773 YP_002893385.1 CDS Tola_2200 NC_012691.1 2406827 2407771 R KEGG: asa:ASA_2062 ribosomal large subunit pseudouridine synthase C; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(2406827..2407771) Tolumonas auensis DSM 9187 7883774 YP_002893386.1 CDS Tola_2201 NC_012691.1 2408095 2410947 D KEGG: asa:ASA_2064 ribonuclease E and G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 2408095..2410947 Tolumonas auensis DSM 9187 7883775 YP_002893387.1 CDS Tola_2202 NC_012691.1 2411097 2411855 D Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2411097..2411855 Tolumonas auensis DSM 9187 7883776 YP_002893388.1 CDS Tola_2203 NC_012691.1 2411971 2412879 D with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2411971..2412879 Tolumonas auensis DSM 9187 7883777 YP_002893389.1 CDS Tola_2204 NC_012691.1 2412950 2413858 D PFAM: PP-loop domain protein; KEGG: aha:AHA_2305 tRNA s2C32 biosynthesis protein TtcA; PP-loop domain-containing protein 2412950..2413858 Tolumonas auensis DSM 9187 7883778 YP_002893390.1 CDS Tola_2205 NC_012691.1 2413914 2414720 R PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: vsa:VSAL_I1578 putative lipoprotein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase complement(2413914..2414720) Tolumonas auensis DSM 9187 7883779 YP_002893391.1 CDS Tola_2206 NC_012691.1 2414981 2415925 R TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: aha:AHA_2102 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase complement(2414981..2415925) Tolumonas auensis DSM 9187 7883780 YP_002893392.1 CDS Tola_2207 NC_012691.1 2416057 2417052 R KEGG: aha:AHA_2653 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase complement(2416057..2417052) Tolumonas auensis DSM 9187 7883781 YP_002893393.1 CDS asnB NC_012691.1 2417382 2419049 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 2417382..2419049 Tolumonas auensis DSM 9187 7883782 YP_002893394.1 CDS Tola_2209 NC_012691.1 2419149 2419520 D PFAM: LrgA family protein; KEGG: aha:AHA_1896 LrgA family protein; LrgA family protein 2419149..2419520 Tolumonas auensis DSM 9187 7883783 YP_002893395.1 CDS Tola_2210 NC_012691.1 2419517 2420203 D PFAM: LrgB family protein; KEGG: asa:ASA_2409 LrgB family protein; LrgB family protein 2419517..2420203 Tolumonas auensis DSM 9187 7883784 YP_002893396.1 CDS Tola_2211 NC_012691.1 2420250 2420447 R KEGG: asa:ASA_2290 hypothetical protein; hypothetical protein complement(2420250..2420447) Tolumonas auensis DSM 9187 7883785 YP_002893397.1 CDS Tola_2212 NC_012691.1 2420529 2421506 R KEGG: asa:ASA_1828 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase complement(2420529..2421506) Tolumonas auensis DSM 9187 7883786 YP_002893398.1 CDS adk NC_012691.1 2421606 2422250 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2421606..2422250) Tolumonas auensis DSM 9187 7883787 YP_002893399.1 CDS Tola_2214 NC_012691.1 2422384 2424285 R molecular chaperone; heat shock protein 90 complement(2422384..2424285) Tolumonas auensis DSM 9187 7883788 YP_002893400.1 CDS Tola_2215 NC_012691.1 2424396 2424998 R KEGG: asa:ASA_1825 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR complement(2424396..2424998) Tolumonas auensis DSM 9187 7883789 YP_002893401.1 CDS Tola_2216 NC_012691.1 2425086 2425418 R PFAM: conserved hypothetical protein; KEGG: aha:AHA_2212 hypothetical protein; hypothetical protein complement(2425086..2425418) Tolumonas auensis DSM 9187 7883790 YP_002893402.1 CDS Tola_2217 NC_012691.1 2425462 2427744 R KEGG: aha:AHA_2211 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(2425462..2427744) Tolumonas auensis DSM 9187 7883791 YP_002893403.1 CDS Tola_2218 NC_012691.1 2427762 2428307 R KEGG: aha:AHA_2210 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(2427762..2428307) Tolumonas auensis DSM 9187 7883792 YP_002893404.1 CDS Tola_2220 NC_012691.1 2429922 2430584 D KEGG: asa:ASA_1542 hypothetical protein; hypothetical protein 2429922..2430584 Tolumonas auensis DSM 9187 7883794 YP_002893405.1 CDS Tola_2221 NC_012691.1 2430634 2431929 R KEGG: asa:ASA_1633 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(2430634..2431929) Tolumonas auensis DSM 9187 7883795 YP_002893406.1 CDS Tola_2222 NC_012691.1 2432222 2433808 D KEGG: aha:AHA_2484 GGDEF/eal domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2432222..2433808 Tolumonas auensis DSM 9187 7883796 YP_002893407.1 CDS Tola_2223 NC_012691.1 2434235 2434948 R KEGG: ilo:IL1821 fatty acid metabolism regulator; TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; fatty acid metabolism transcriptional regulator FadR complement(2434235..2434948) Tolumonas auensis DSM 9187 7883798 YP_002893408.1 CDS Tola_2224 NC_012691.1 2435085 2435417 R TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: vvy:VV1179 glutaredoxin-related protein; glutaredoxin-like protein complement(2435085..2435417) Tolumonas auensis DSM 9187 7883799 YP_002893409.1 CDS Tola_2225 NC_012691.1 2435662 2436243 D PFAM: manganese and iron superoxide dismutase; KEGG: aha:AHA_1403 superoxide dismutase (Fe); Superoxide dismutase 2435662..2436243 Tolumonas auensis DSM 9187 7883800 YP_002893410.1 CDS Tola_2226 NC_012691.1 2436320 2437195 R KEGG: asa:ASA_2354 succinyl-CoA ligase, alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase, alpha subunit complement(2436320..2437195) Tolumonas auensis DSM 9187 7883801 YP_002893411.1 CDS Tola_2227 NC_012691.1 2437192 2438361 R KEGG: aha:AHA_1929 succinyl-CoA synthetase beta chain; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase, beta subunit complement(2437192..2438361) Tolumonas auensis DSM 9187 7883802 YP_002893412.1 CDS Tola_2228 NC_012691.1 2438410 2439606 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: aha:AHA_1928 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(2438410..2439606) Tolumonas auensis DSM 9187 7883803 YP_002893413.1 CDS Tola_2229 NC_012691.1 2439618 2442431 R KEGG: asa:ASA_2357 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase, E1 subunit complement(2439618..2442431) Tolumonas auensis DSM 9187 7883804 YP_002893414.1 CDS Tola_2230 NC_012691.1 2442955 2444247 D KEGG: aha:AHA_1922 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 2442955..2444247 Tolumonas auensis DSM 9187 7883805 YP_002893415.1 CDS Tola_2231 NC_012691.1 2444315 2445334 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(2444315..2445334) Tolumonas auensis DSM 9187 7883806 YP_002893416.1 CDS Tola_2232 NC_012691.1 2445496 2446260 R KEGG: ppr:PBPRA2382 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(2445496..2446260) Tolumonas auensis DSM 9187 7883807 YP_002893417.1 CDS Tola_2233 NC_012691.1 2446257 2446445 R PFAM: protein of unknown function DUF343; KEGG: aha:AHA_2776 hypothetical protein; hypothetical protein complement(2446257..2446445) Tolumonas auensis DSM 9187 7883808 YP_002893418.1 CDS lpxK NC_012691.1 2446429 2447409 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(2446429..2447409) Tolumonas auensis DSM 9187 7883809 YP_002893419.1 CDS Tola_2235 NC_012691.1 2447406 2449175 R KEGG: asa:ASA_1551 lipid A export ATP-binding/permease; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA complement(2447406..2449175) Tolumonas auensis DSM 9187 7883810 YP_002893420.1 CDS Tola_2236 NC_012691.1 2449208 2451424 R TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: aha:AHA_2779 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 complement(2449208..2451424) Tolumonas auensis DSM 9187 7886000 YP_002893421.1 CDS Tola_2237 NC_012691.1 2451744 2452346 D PFAM: SNARE associated Golgi protein; KEGG: cvi:CV_3792 DedA family protein; hypothetical protein 2451744..2452346 Tolumonas auensis DSM 9187 7886001 YP_002893422.1 CDS Tola_2238 NC_012691.1 2452393 2453634 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: asa:ASA_1885 lipoprotein releasing system transmembrane protein LolE; lipoprotein releasing system transmembrane protein LolC/E family complement(2452393..2453634) Tolumonas auensis DSM 9187 7886002 YP_002893423.1 CDS Tola_2239 NC_012691.1 2453634 2454317 R KEGG: aha:AHA_2006 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein complement(2453634..2454317) Tolumonas auensis DSM 9187 7886003 YP_002893424.1 CDS Tola_2240 NC_012691.1 2454310 2455545 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: aha:AHA_2005 lipoprotein-releasing system transmembrane protein LolC; lipoprotein releasing system transmembrane protein LolC/E family complement(2454310..2455545) Tolumonas auensis DSM 9187 7886004 YP_002893425.1 CDS Tola_2241 NC_012691.1 2455711 2459163 D KEGG: aha:AHA_2003 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; helicase domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 2455711..2459163 Tolumonas auensis DSM 9187 7886005 YP_002893426.1 CDS Tola_2242 NC_012691.1 2459295 2461457 R KEGG: aha:AHA_3299 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase complement(2459295..2461457) Tolumonas auensis DSM 9187 7886006 YP_002893427.1 CDS Tola_2243 NC_012691.1 2461639 2461908 R TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: eca:ECA0715 30S ribosomal protein S15; 30S ribosomal protein S15 complement(2461639..2461908) Tolumonas auensis DSM 9187 7886007 YP_002893428.1 CDS Tola_2244 NC_012691.1 2462002 2462976 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: aha:AHA_3301 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(2462002..2462976) Tolumonas auensis DSM 9187 7886008 YP_002893429.1 CDS Tola_2245 NC_012691.1 2462979 2463383 R TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: aha:AHA_3302 ribosome-binding factor A; ribosome-binding factor A complement(2462979..2463383) Tolumonas auensis DSM 9187 7886009 YP_002893430.1 CDS infB NC_012691.1 2463429 2466161 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2463429..2466161) Tolumonas auensis DSM 9187 7886010 YP_002893431.1 CDS nusA NC_012691.1 2466179 2467678 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2466179..2467678) Tolumonas auensis DSM 9187 7886011 YP_002893432.1 CDS Tola_2248 NC_012691.1 2467694 2468152 R PFAM: protein of unknown function DUF150; KEGG: aha:AHA_3305 15 kDa protein; hypothetical protein complement(2467694..2468152) Tolumonas auensis DSM 9187 7886012 YP_002893433.1 CDS Tola_2249 NC_012691.1 2468517 2468864 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: amc:MADE_01686 protein-export membrane protein SecG(general secretory pathway); preprotein translocase subunit SecG complement(2468517..2468864) Tolumonas auensis DSM 9187 7886015 YP_002893434.1 CDS glmM NC_012691.1 2469077 2470411 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2469077..2470411) Tolumonas auensis DSM 9187 7886016 YP_002893435.1 CDS Tola_2251 NC_012691.1 2470431 2471273 R KEGG: aha:AHA_3311 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(2470431..2471273) Tolumonas auensis DSM 9187 7886017 YP_002893436.1 CDS Tola_2252 NC_012691.1 2471332 2473257 R KEGG: aha:AHA_3312 ATP-dependent metallopeptidase HflB; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(2471332..2473257) Tolumonas auensis DSM 9187 7886018 YP_002893437.1 CDS Tola_2253 NC_012691.1 2473309 2473938 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: asa:ASA_1000 23S ribosomal RNA methyltransferase; ribosomal RNA methyltransferase RrmJ/FtsJ complement(2473309..2473938) Tolumonas auensis DSM 9187 7886019 YP_002893438.1 CDS Tola_2254 NC_012691.1 2474033 2474326 D PFAM: protein of unknown function UPF0044; KEGG: swp:swp_1209 hypothetical protein; hypothetical protein 2474033..2474326 Tolumonas auensis DSM 9187 7886020 YP_002893439.1 CDS Tola_2255 NC_012691.1 2474385 2474861 R TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: hsm:HSM_1478 transcription elongation factor GreA; transcription elongation factor GreA complement(2474385..2474861) Tolumonas auensis DSM 9187 7886021 YP_002893440.1 CDS Tola_2256 NC_012691.1 2475006 2476136 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2475006..2476136) Tolumonas auensis DSM 9187 7886022 YP_002893441.1 CDS dnaK NC_012691.1 2476223 2478157 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2476223..2478157) Tolumonas auensis DSM 9187 7886023 YP_002893442.1 CDS Tola_2258 NC_012691.1 2478303 2478896 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2478303..2478896) Tolumonas auensis DSM 9187 7886024 YP_002893443.1 CDS Tola_2259 NC_012691.1 2479043 2479927 D PFAM: ATP-NAD/AcoX kinase; KEGG: asa:ASA_2998 NAD(+) kinase; ATP-NAD/AcoX kinase 2479043..2479927 Tolumonas auensis DSM 9187 7886025 YP_002893444.1 CDS Tola_2260 NC_012691.1 2480018 2481685 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: aha:AHA_2986 recombination and repair protein; recombination and repair protein 2480018..2481685 Tolumonas auensis DSM 9187 7886026 YP_002893445.1 CDS Tola_2261 NC_012691.1 2481697 2482098 D PFAM: SmpA/OmlA domain protein; KEGG: aha:AHA_1447 outer membrane lipoprotein OmlA; SmpA/OmlA domain-containing protein 2481697..2482098 Tolumonas auensis DSM 9187 7886027 YP_002893446.1 CDS Tola_2262 NC_012691.1 2482152 2482451 R PFAM: protein of unknown function UPF0125; KEGG: aha:AHA_1445 protein YfjF; hypothetical protein complement(2482152..2482451) Tolumonas auensis DSM 9187 7886028 YP_002893447.1 CDS Tola_2263 NC_012691.1 2482444 2482878 R PFAM: cyclase/dehydrase; KEGG: eta:ETA_09730 hypothetical protein; cyclase/dehydrase complement(2482444..2482878) Tolumonas auensis DSM 9187 7886029 YP_002893448.1 CDS Tola_2264 NC_012691.1 2483010 2483492 D TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: esa:ESA_00635 hypothetical protein; SsrA-binding protein 2483010..2483492 Tolumonas auensis DSM 9187 7886030 YP_002893449.1 CDS Tola_2265 NC_012691.1 2484079 2485326 D PFAM: integrase family protein; KEGG: she:Shewmr4_2777 phage integrase family protein; integrase family protein 2484079..2485326 Tolumonas auensis DSM 9187 7886032 YP_002893450.1 CDS Tola_2266 NC_012691.1 2485444 2485830 R TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: rfe:RF_0329 nucleotidyltransferase domain-containing protein; nucleotidyltransferase substrate binding protein complement(2485444..2485830) Tolumonas auensis DSM 9187 7886033 YP_002893451.1 CDS Tola_2267 NC_012691.1 2485808 2486110 R PFAM: DNA polymerase beta domain protein region; KEGG: rbe:RBE_1175 nucleotidyltransferase; DNA polymerase beta domain-containing protein complement(2485808..2486110) Tolumonas auensis DSM 9187 7886034 YP_002893452.1 CDS Tola_2268 NC_012691.1 2486206 2487990 R PFAM: protein of unknown function DUF87; KEGG: vfm:VFMJ11_0910 hypothetical protein; hypothetical protein complement(2486206..2487990) Tolumonas auensis DSM 9187 7886035 YP_002893453.1 CDS Tola_2269 NC_012691.1 2488000 2489148 R KEGG: vfm:VFMJ11_0911 hypothetical protein; hypothetical protein complement(2488000..2489148) Tolumonas auensis DSM 9187 7886036 YP_002893454.1 CDS Tola_2270 NC_012691.1 2489178 2492207 R PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; KEGG: shm:Shewmr7_1787 type III restriction enzyme, res subunit; type III restriction protein res subunit complement(2489178..2492207) Tolumonas auensis DSM 9187 7886037 YP_002893455.1 CDS Tola_2271 NC_012691.1 2492225 2493220 R PFAM: filamentation induced by cAMP protein Fic; KEGG: ppd:Ppro_1856 fis family transcriptional regulator; filamentation induced by cAMP protein fic complement(2492225..2493220) Tolumonas auensis DSM 9187 7886038 YP_002893456.1 CDS Tola_2272 NC_012691.1 2493223 2494488 R PFAM: restriction modification system DNA specificity domain; KEGG: shw:Sputw3181_1088 putative type I site-specific restriction-modification system, S subunit; restriction modification system DNA specificity domain-containing protein complement(2493223..2494488) Tolumonas auensis DSM 9187 7886039 YP_002893457.1 CDS Tola_2273 NC_012691.1 2494504 2496897 R PFAM: N-6 DNA methylase; KEGG: shw:Sputw3181_1087 N-6 DNA methylase; N-6 DNA methylase complement(2494504..2496897) Tolumonas auensis DSM 9187 7886040 YP_002893458.1 CDS Tola_2274 NC_012691.1 2496941 2497831 R KEGG: shw:Sputw3181_1086 hypothetical protein; hypothetical protein complement(2496941..2497831) Tolumonas auensis DSM 9187 7886041 YP_002893459.1 CDS Tola_2275 NC_012691.1 2497961 2498647 R KEGG: seg:SG0293 hypothetical protein; hypothetical protein complement(2497961..2498647) Tolumonas auensis DSM 9187 7886042 YP_002893460.1 CDS Tola_2276 NC_012691.1 2498852 2500297 R KEGG: ecd:ECDH10B_2791 CP4-57 prophage; hypothetical protein; CP4-57 prophage protein complement(2498852..2500297) Tolumonas auensis DSM 9187 7886043 YP_002893461.1 CDS Tola_2277 NC_012691.1 2500315 2500668 R PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1765 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA complement(2500315..2500668) Tolumonas auensis DSM 9187 7886044 YP_002893462.1 CDS Tola_2278 NC_012691.1 2500761 2502518 D KEGG: conserved hypothetical protein; hypothetical protein 2500761..2502518 Tolumonas auensis DSM 9187 7886045 YP_002893463.1 CDS Tola_2279 NC_012691.1 2502656 2503606 D TIGRFAM: phage/plasmid-related protein TIGR03299; KEGG: aha:AHA_1087 hypothetical protein; phage/plasmid-related protein 2502656..2503606 Tolumonas auensis DSM 9187 7886046 YP_002893464.1 CDS Tola_2280 NC_012691.1 2503691 2504674 D TIGRFAM: phage-type endonuclease; KEGG: aha:AHA_1086 hypothetical protein; phage-type endonuclease 2503691..2504674 Tolumonas auensis DSM 9187 7886047 YP_002893465.1 CDS Tola_2281 NC_012691.1 2504693 2505625 D KEGG: aha:AHA_1085 hypothetical protein; hypothetical protein 2504693..2505625 Tolumonas auensis DSM 9187 7886048 YP_002893466.1 CDS Tola_2282 NC_012691.1 2505647 2505994 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: aha:AHA_1084 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(2505647..2505994) Tolumonas auensis DSM 9187 7886049 YP_002893467.1 CDS Tola_2283 NC_012691.1 2506227 2506550 D KEGG: aha:AHA_1083 hypothetical protein; hypothetical protein 2506227..2506550 Tolumonas auensis DSM 9187 7886050 YP_002893468.1 CDS Tola_2284 NC_012691.1 2506563 2507012 D KEGG: aha:AHA_1082 hypothetical protein; hypothetical protein 2506563..2507012 Tolumonas auensis DSM 9187 7886051 YP_002893469.1 CDS Tola_2285 NC_012691.1 2507258 2507767 D KEGG: reh:H16_A2680 hypothetical membrane associated protein; hypothetical protein 2507258..2507767 Tolumonas auensis DSM 9187 7886052 YP_002893470.1 CDS Tola_2286 NC_012691.1 2507974 2508777 R KEGG: similar to lava lamp CG6450-PC; hypothetical protein complement(2507974..2508777) Tolumonas auensis DSM 9187 7886053 YP_002893471.1 CDS Tola_2287 NC_012691.1 2508764 2509381 R KEGG: nis:NIS_1348 ATP-dependent Lon protease; hypothetical protein complement(2508764..2509381) Tolumonas auensis DSM 9187 7886054 YP_002893472.1 CDS Tola_2288 NC_012691.1 2509381 2509851 R KEGG: ecy:ECSE_2907 histidin kinase-like protein; histidin kinase-like protein complement(2509381..2509851) Tolumonas auensis DSM 9187 7886055 YP_002893473.1 CDS Tola_2290 NC_012691.1 2511052 2511276 D hypothetical protein 2511052..2511276 Tolumonas auensis DSM 9187 7886057 YP_002893474.1 CDS Tola_2291 NC_012691.1 2511536 2512507 D TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: dde:Dde_1854 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na+/Ca+ antiporter 2511536..2512507 Tolumonas auensis DSM 9187 7886058 YP_002893475.1 CDS Tola_2292 NC_012691.1 2512849 2513073 D hypothetical protein 2512849..2513073 Tolumonas auensis DSM 9187 7886059 YP_002893476.1 CDS Tola_2293 NC_012691.1 2513335 2514486 D PFAM: iron-containing alcohol dehydrogenase; KEGG: glo:Glov_0177 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2513335..2514486 Tolumonas auensis DSM 9187 7886060 YP_002893477.1 CDS Tola_2294 NC_012691.1 2514597 2515208 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gme:Gmet_0239 CMP/dCMP deaminase, zinc-binding protein; zinc-binding CMP/dCMP deaminase 2514597..2515208 Tolumonas auensis DSM 9187 7886061 YP_002893478.1 CDS Tola_2295 NC_012691.1 2515208 2515744 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: asa:ASA_0785 2'-5' RNA ligase; 2'-5' RNA ligase 2515208..2515744 Tolumonas auensis DSM 9187 7886062 YP_002893479.1 CDS Tola_2296 NC_012691.1 2516074 2516523 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: aha:AHA_3534 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 2516074..2516523 Tolumonas auensis DSM 9187 7886063 YP_002893480.1 CDS Tola_2297 NC_012691.1 2516584 2517453 D PFAM: glutamyl-tRNA synthetase class Ic; KEGG: eca:ECA3318 glutamyl-Q tRNA(Asp) synthetase; Glutamate--tRNA ligase 2516584..2517453 Tolumonas auensis DSM 9187 7886064 YP_002893481.1 CDS Tola_2298 NC_012691.1 2517450 2520521 R PFAM: acriflavin resistance protein; KEGG: dar:Daro_2958 acriflavin resistance protein; acriflavin resistance protein complement(2517450..2520521) Tolumonas auensis DSM 9187 7886065 YP_002893482.1 CDS Tola_2299 NC_012691.1 2520527 2521648 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_2957 secretion protein HlyD; RND family efflux transporter MFP subunit complement(2520527..2521648) Tolumonas auensis DSM 9187 7886066 YP_002893483.1 CDS Tola_2300 NC_012691.1 2521815 2523380 D KEGG: aha:AHA_3536 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 2521815..2523380 Tolumonas auensis DSM 9187 7886067 YP_002893484.1 CDS Tola_2301 NC_012691.1 2523373 2523858 D KEGG: aha:AHA_3537 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2523373..2523858 Tolumonas auensis DSM 9187 7886068 YP_002893485.1 CDS panB NC_012691.1 2523881 2524675 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2523881..2524675 Tolumonas auensis DSM 9187 7886069 YP_002893486.1 CDS panC NC_012691.1 2524688 2525554 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2524688..2525554 Tolumonas auensis DSM 9187 7886070 YP_002893487.1 CDS Tola_2304 NC_012691.1 2525619 2525999 D KEGG: pin:Ping_0578 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 2525619..2525999 Tolumonas auensis DSM 9187 7886071 YP_002893488.1 CDS Tola_2305 NC_012691.1 2526040 2526633 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2526040..2526633 Tolumonas auensis DSM 9187 7886072 YP_002893489.1 CDS Tola_2306 NC_012691.1 2526653 2527744 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2526653..2527744 Tolumonas auensis DSM 9187 7886073 YP_002893490.1 CDS Tola_2307 NC_012691.1 2527850 2530282 R KEGG: yen:YE0646 putative formate acetyltransferase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase complement(2527850..2530282) Tolumonas auensis DSM 9187 7886074 YP_002893491.1 CDS Tola_2308 NC_012691.1 2530285 2531199 R KEGG: spe:Spro_2641 glycyl-radical activating family protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family complement(2530285..2531199) Tolumonas auensis DSM 9187 7886075 YP_002893492.1 CDS Tola_2309 NC_012691.1 2531332 2531985 D similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 2531332..2531985 Tolumonas auensis DSM 9187 7886076 YP_002893493.1 CDS Tola_2310 NC_012691.1 2532817 2534115 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2532817..2534115) Tolumonas auensis DSM 9187 7886245 YP_002893494.1 CDS Tola_2311 NC_012691.1 2534254 2535600 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: aha:AHA_1867 recombination factor protein RarA; recombination factor protein RarA complement(2534254..2535600) Tolumonas auensis DSM 9187 7886246 YP_002893495.1 CDS Tola_2312 NC_012691.1 2535600 2536223 R TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: asa:ASA_2437 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(2535600..2536223) Tolumonas auensis DSM 9187 7886247 YP_002893496.1 CDS Tola_2313 NC_012691.1 2536225 2538837 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: aha:AHA_1865 FtsK/SpoIIIE family protein; cell division protein FtsK complement(2536225..2538837) Tolumonas auensis DSM 9187 7886248 YP_002893497.1 CDS Tola_2314 NC_012691.1 2539005 2539496 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: asa:ASA_2439 leucine-responsive transcriptional regulator; transcriptional regulator, AsnC family complement(2539005..2539496) Tolumonas auensis DSM 9187 7886249 YP_002893498.1 CDS Tola_2315 NC_012691.1 2539659 2540783 D TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: shn:Shewana3_2048 L-alanine dehydrogenase; alanine dehydrogenase 2539659..2540783 Tolumonas auensis DSM 9187 7886250 YP_002893499.1 CDS Tola_2316 NC_012691.1 2540970 2541926 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aha:AHA_1863 thioredoxin-disulfide reductase; thioredoxin reductase 2540970..2541926 Tolumonas auensis DSM 9187 7886251 YP_002893500.1 CDS aat NC_012691.1 2542056 2542760 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2542056..2542760 Tolumonas auensis DSM 9187 7886252 YP_002893501.1 CDS Tola_2318 NC_012691.1 2542757 2543500 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2542757..2543500 Tolumonas auensis DSM 9187 7886253 YP_002893502.1 CDS Tola_2319 NC_012691.1 2543538 2543756 D KEGG: swp:swp_1872 protein chain initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein; translation initiation factor IF-1 2543538..2543756 Tolumonas auensis DSM 9187 7886254 YP_002893503.1 CDS Tola_2320 NC_012691.1 2543820 2546096 R KEGG: asa:ASA_2446 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(2543820..2546096) Tolumonas auensis DSM 9187 7886255 YP_002893504.1 CDS Tola_2321 NC_012691.1 2546152 2546466 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: vfm:VFMJ11_1893 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2546152..2546466) Tolumonas auensis DSM 9187 7886256 YP_002893505.1 CDS Tola_2322 NC_012691.1 2546681 2546899 D KEGG: sbp:Sbal223_1877 cold-shock DNA-binding domain protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2546681..2546899 Tolumonas auensis DSM 9187 7886257 YP_002893506.1 CDS Tola_2323 NC_012691.1 2547007 2548260 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2547007..2548260) Tolumonas auensis DSM 9187 7886258 YP_002893507.1 CDS Tola_2324 NC_012691.1 2548475 2548930 D PFAM: NUDIX hydrolase; KEGG: aha:AHA_1416 7,8-dihydro-8-oxoguanine-triphosphatase; NUDIX hydrolase 2548475..2548930 Tolumonas auensis DSM 9187 7886259 YP_002893508.1 CDS mnmA NC_012691.1 2548998 2550107 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2548998..2550107 Tolumonas auensis DSM 9187 7886260 YP_002893509.1 CDS Tola_2326 NC_012691.1 2550110 2550733 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2550110..2550733 Tolumonas auensis DSM 9187 7886261 YP_002893510.1 CDS Tola_2327 NC_012691.1 2550770 2552140 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2550770..2552140 Tolumonas auensis DSM 9187 7886262 YP_002893511.1 CDS Tola_2328 NC_012691.1 2552213 2553805 R KEGG: eca:ECA2938 nif-specific regulatory protein; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: GAF domain protein; AAA ATPase; Fis Family transcriptional regulator NifA complement(2552213..2553805) Tolumonas auensis DSM 9187 7886263 YP_002893512.1 CDS Tola_2329 NC_012691.1 2553802 2555328 R KEGG: kpe:KPK_1699 nitrogen fixation negative regulator NifL; TIGRFAM: nitrogen fixation negative regulator NifL; PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAC repeat-containing protein; PAS domain containing protein; putative PAS/PAC sensor protein complement(2553802..2555328) Tolumonas auensis DSM 9187 7886264 YP_002893513.1 CDS Tola_2330 NC_012691.1 2555673 2556251 D TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: hha:Hhal_0283 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 2555673..2556251 Tolumonas auensis DSM 9187 7886265 YP_002893514.1 CDS Tola_2331 NC_012691.1 2556262 2556813 D TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mca:MCA2823 electron transport complex, B subunit; RnfABCDGE type electron transport complex subunit B 2556262..2556813 Tolumonas auensis DSM 9187 7886266 YP_002893515.1 CDS Tola_2332 NC_012691.1 2556806 2558257 D TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: azo:azo0515 electronen transport complex protein RnfC; RnfABCDGE type electron transport complex subunit C 2556806..2558257 Tolumonas auensis DSM 9187 7886267 YP_002893516.1 CDS Tola_2333 NC_012691.1 2558254 2559234 D TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: mgm:Mmc1_0687 electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 2558254..2559234 Tolumonas auensis DSM 9187 7886268 YP_002893517.1 CDS Tola_2334 NC_012691.1 2559234 2559860 D TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: zmo:ZMO1810 NADH:ubiquinone oxidoreductase subunit; RnfABCDGE type electron transport complex subunit G 2559234..2559860 Tolumonas auensis DSM 9187 7886269 YP_002893518.1 CDS Tola_2335 NC_012691.1 2559863 2560549 D TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: eba:ebA2585 SoxR-reducing system protein RsxE; RnfABCDGE type electron transport complex subunit E 2559863..2560549 Tolumonas auensis DSM 9187 7886270 YP_002893519.1 CDS Tola_2336 NC_012691.1 2560546 2560806 D PFAM: protein of unknown function UPF0125; KEGG: azo:azo0511 hypothetical protein; hypothetical protein 2560546..2560806 Tolumonas auensis DSM 9187 7886271 YP_002893520.1 CDS Tola_2337 NC_012691.1 2560954 2562285 D KEGG: nwi:Nwi_0939 hypothetical protein; hypothetical protein 2560954..2562285 Tolumonas auensis DSM 9187 7886272 YP_002893521.1 CDS Tola_2338 NC_012691.1 2562484 2563020 D TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: azo:azo2281 flavodoxin FldA; flavodoxin 2562484..2563020 Tolumonas auensis DSM 9187 7886273 YP_002893522.1 CDS Tola_2339 NC_012691.1 2563172 2564422 D PFAM: amino acid permease-associated region; KEGG: asa:ASA_3136 inner membrane protein YjeH; amino acid permease 2563172..2564422 Tolumonas auensis DSM 9187 7886274 YP_002893523.1 CDS Tola_2340 NC_012691.1 2564419 2565594 D PFAM: metallophosphoesterase; KEGG: mxa:MXAN_6383 Ser/Thr protein phosphatase family protein; metallophosphoesterase 2564419..2565594 Tolumonas auensis DSM 9187 7886275 YP_002893524.1 CDS Tola_2341 NC_012691.1 2565607 2566446 R TIGRFAM: nitrogen fixation protein NifM; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: psa:PST_1357 NifM protein, putative a peptidyl-prolyl cis/trans isomerase; nitrogen fixation protein NifM complement(2565607..2566446) Tolumonas auensis DSM 9187 7886276 YP_002893525.1 CDS Tola_2342 NC_012691.1 2566440 2566904 R PFAM: NifZ family protein; KEGG: azo:azo0547 nitrogen fixation protein; NifZ family protein complement(2566440..2566904) Tolumonas auensis DSM 9187 7886277 YP_002893526.1 CDS Tola_2343 NC_012691.1 2566901 2567227 R PFAM: nitrogen fixation protein NifW; KEGG: eca:ECA2943 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW complement(2566901..2567227) Tolumonas auensis DSM 9187 7886278 YP_002893527.1 CDS Tola_2344 NC_012691.1 2567247 2568410 R TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: kpe:KPK_1704 homocitrate synthase; homocitrate synthase complement(2567247..2568410) Tolumonas auensis DSM 9187 7886279 YP_002893528.1 CDS Tola_2345 NC_012691.1 2568585 2569967 R PFAM: amino acid permease-associated region; KEGG: aha:AHA_2694 aromatic amino acid transport protein AroP; amino acid permease complement(2568585..2569967) Tolumonas auensis DSM 9187 7886280 YP_002893529.1 CDS Tola_2346 NC_012691.1 2570266 2571138 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sde:Sde_3214 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 2570266..2571138 Tolumonas auensis DSM 9187 7886281 YP_002893530.1 CDS Tola_2347 NC_012691.1 2571191 2572216 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: hch:HCH_00510 arsenite efflux pump ACR3 and related permease; arsenical-resistance protein complement(2571191..2572216) Tolumonas auensis DSM 9187 7886282 YP_002893531.1 CDS Tola_2348 NC_012691.1 2572516 2572755 D PFAM: protein of unknown function DUF1407; KEGG: aha:AHA_1764 ubiquitin ligase sinat5; hypothetical protein 2572516..2572755 Tolumonas auensis DSM 9187 7886283 YP_002893532.1 CDS Tola_2349 NC_012691.1 2573035 2574051 D NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 2573035..2574051 Tolumonas auensis DSM 9187 7886284 YP_002893533.1 CDS Tola_2350 NC_012691.1 2574147 2574809 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3036 putative phosphatase; putative phosphatase complement(2574147..2574809) Tolumonas auensis DSM 9187 7886285 YP_002893534.1 CDS Tola_2351 NC_012691.1 2574886 2575077 R hypothetical protein complement(2574886..2575077) Tolumonas auensis DSM 9187 7886286 YP_002893535.1 CDS Tola_2352 NC_012691.1 2575210 2576094 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1486 LysR family transcriptional regulator; LysR family transcriptional regulator 2575210..2576094 Tolumonas auensis DSM 9187 7886287 YP_002893536.1 CDS Tola_2353 NC_012691.1 2576150 2576893 R TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: aha:AHA_3373 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(2576150..2576893) Tolumonas auensis DSM 9187 7886288 YP_002893537.1 CDS Tola_2354 NC_012691.1 2576883 2578571 R KEGG: ppr:PBPRA3320 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase (NADPH) hemoprotein subunit beta complement(2576883..2578571) Tolumonas auensis DSM 9187 7886289 YP_002893538.1 CDS Tola_2355 NC_012691.1 2578571 2580388 R TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: aha:AHA_3371 sulfite reductase [NADPH] flavoprotein, alpha-component; sulfite reductase (NADPH) flavoprotein, alpha chain complement(2578571..2580388) Tolumonas auensis DSM 9187 7886290 YP_002893539.1 CDS Tola_2356 NC_012691.1 2580660 2581313 R KEGG: asa:ASA_3619 hypothetical protein; hypothetical protein complement(2580660..2581313) Tolumonas auensis DSM 9187 7886291 YP_002893540.1 CDS gltX NC_012691.1 2581385 2582791 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2581385..2582791) Tolumonas auensis DSM 9187 7886292 YP_002893541.1 CDS Tola_2358 NC_012691.1 2583097 2583825 R KEGG: glo:Glov_2111 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2583097..2583825) Tolumonas auensis DSM 9187 7886294 YP_002893542.1 CDS Tola_2359 NC_012691.1 2583828 2584202 R KEGG: gsu:GSU1553 hypothetical protein; hypothetical protein complement(2583828..2584202) Tolumonas auensis DSM 9187 7886295 YP_002893543.1 CDS Tola_2360 NC_012691.1 2584212 2584760 R KEGG: pap:PSPA7_0251 hypothetical protein; hypothetical protein complement(2584212..2584760) Tolumonas auensis DSM 9187 7886296 YP_002893544.1 CDS Tola_2361 NC_012691.1 2584761 2586788 R PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; protein phosphatase 2C domain protein; KEGG: gsu:GSU1551 signal domain-containing protein; protein serine/threonine phosphatase complement(2584761..2586788) Tolumonas auensis DSM 9187 7886297 YP_002893545.1 CDS Tola_2362 NC_012691.1 2587273 2590152 D transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 2587273..2590152 Tolumonas auensis DSM 9187 7886299 YP_002893546.1 CDS Tola_2363 NC_012691.1 2590226 2590888 D PFAM: pseudouridine synthase; KEGG: asa:ASA_3427 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 2590226..2590888 Tolumonas auensis DSM 9187 7886300 YP_002893547.1 CDS Tola_2364 NC_012691.1 2590953 2591786 R PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: aha:AHA_0948 co-chaperone DjlA; heat shock protein DnaJ domain-containing protein complement(2590953..2591786) Tolumonas auensis DSM 9187 7886301 YP_002893548.1 CDS Tola_2365 NC_012691.1 2591788 2592456 R PFAM: Nucleotidyl transferase; KEGG: asa:ASA_3345 nucleotidyl transferase family protein; nucleotidyl transferase complement(2591788..2592456) Tolumonas auensis DSM 9187 7886302 YP_002893549.1 CDS Tola_2366 NC_012691.1 2592453 2593439 R PFAM: aminoglycoside phosphotransferase; KEGG: asa:ASA_3346 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2592453..2593439) Tolumonas auensis DSM 9187 7886303 YP_002893550.1 CDS Tola_2367 NC_012691.1 2593575 2595944 D PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: asa:ASA_3347 organic solvent tolerance protein; organic solvent tolerance protein 2593575..2595944 Tolumonas auensis DSM 9187 7886304 YP_002893551.1 CDS Tola_2368 NC_012691.1 2595960 2597270 D PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: aha:AHA_0944 peptidylprolyl cis-trans isomerase SurA; SurA domain-containing protein 2595960..2597270 Tolumonas auensis DSM 9187 7886305 YP_002893552.1 CDS Tola_2369 NC_012691.1 2597267 2598256 D KEGG: sgl:SG0425 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2597267..2598256 Tolumonas auensis DSM 9187 7886306 YP_002893553.1 CDS Tola_2370 NC_012691.1 2598253 2599059 D KEGG: aha:AHA_0942 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 2598253..2599059 Tolumonas auensis DSM 9187 7886307 YP_002893554.1 CDS Tola_2371 NC_012691.1 2599069 2599440 D PFAM: ApaG domain protein; KEGG: vvy:VV0477 ApaG; ApaG domain-containing protein 2599069..2599440 Tolumonas auensis DSM 9187 7886308 YP_002893555.1 CDS apaH NC_012691.1 2599509 2600339 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 2599509..2600339 Tolumonas auensis DSM 9187 7886309 YP_002893556.1 CDS Tola_2373 NC_012691.1 2600373 2600864 R PFAM: dihydrofolate reductase region; KEGG: aha:AHA_3377 dihydrofolate reductase; Dihydrofolate reductase complement(2600373..2600864) Tolumonas auensis DSM 9187 7886310 YP_002893557.1 CDS Tola_2374 NC_012691.1 2600869 2601333 R KEGG: asa:ASA_0931 hypothetical protein; hypothetical protein complement(2600869..2601333) Tolumonas auensis DSM 9187 7886311 YP_002893558.1 CDS Tola_2375 NC_012691.1 2601333 2602127 R PFAM: protein of unknown function DUF1212; KEGG: aha:AHA_3379 hypothetical protein; hypothetical protein complement(2601333..2602127) Tolumonas auensis DSM 9187 7886312 YP_002893559.1 CDS Tola_2376 NC_012691.1 2602195 2603289 R KEGG: sse:Ssed_0685 hypothetical protein; hypothetical protein complement(2602195..2603289) Tolumonas auensis DSM 9187 7886313 YP_002893560.1 CDS obgE NC_012691.1 2603332 2604513 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(2603332..2604513) Tolumonas auensis DSM 9187 7886314 YP_002893561.1 CDS Tola_2378 NC_012691.1 2604740 2604997 R TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: ypb:YPTS_0495 ribosomal protein L27; 50S ribosomal protein L27 complement(2604740..2604997) Tolumonas auensis DSM 9187 7886315 YP_002893562.1 CDS Tola_2379 NC_012691.1 2605015 2605326 R TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: amc:MADE_03731 50S ribosomal protein L21; 50S ribosomal protein L21 complement(2605015..2605326) Tolumonas auensis DSM 9187 7886316 YP_002893563.1 CDS Tola_2380 NC_012691.1 2605581 2606552 D PFAM: Polyprenyl synthetase; KEGG: asa:ASA_3364 octaprenyl-diphosphate synthase; Trans-hexaprenyltranstransferase 2605581..2606552 Tolumonas auensis DSM 9187 7886317 YP_002893564.1 CDS Tola_2381 NC_012691.1 2606663 2607961 R KEGG: vco:VC0395_A2180 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; adenylosuccinate synthetase complement(2606663..2607961) Tolumonas auensis DSM 9187 7886318 YP_002893565.1 CDS Tola_2382 NC_012691.1 2608097 2608987 R KEGG: aha:AHA_0927 HflC protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein complement(2608097..2608987) Tolumonas auensis DSM 9187 7886319 YP_002893566.1 CDS Tola_2383 NC_012691.1 2608987 2610159 R KEGG: asa:ASA_3367 HflK protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein complement(2608987..2610159) Tolumonas auensis DSM 9187 7886320 YP_002893567.1 CDS Tola_2384 NC_012691.1 2610212 2611501 R TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: aha:AHA_0925 GTP-binding protein HflX; GTP-binding proten HflX complement(2610212..2611501) Tolumonas auensis DSM 9187 7886321 YP_002893568.1 CDS Tola_2385 NC_012691.1 2611561 2611818 R TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: vvy:VV3071 RNA-binding protein Hfq; RNA chaperone Hfq complement(2611561..2611818) Tolumonas auensis DSM 9187 7886322 YP_002893569.1 CDS Tola_2386 NC_012691.1 2611892 2612824 R KEGG: aha:AHA_0923 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2611892..2612824) Tolumonas auensis DSM 9187 7886323 YP_002893570.1 CDS Tola_2387 NC_012691.1 2612817 2614601 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation; KEGG: asa:ASA_3371 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(2612817..2614601) Tolumonas auensis DSM 9187 7886324 YP_002893571.1 CDS Tola_2388 NC_012691.1 2614603 2616198 R KEGG: ppr:PBPRA3353 putative N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; N-acetylmuramoyl-L-alanine amidase complement(2614603..2616198) Tolumonas auensis DSM 9187 7885919 YP_002893572.1 CDS Tola_2389 NC_012691.1 2616195 2616662 R PFAM: protein of unknown function UPF0079; KEGG: asa:ASA_3373 hypothetical protein; hypothetical protein complement(2616195..2616662) Tolumonas auensis DSM 9187 7885920 YP_002893573.1 CDS Tola_2390 NC_012691.1 2616631 2618082 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: yjeF; uncharacterized protein YjeF; carbohydrate kinase complement(2616631..2618082) Tolumonas auensis DSM 9187 7885921 YP_002893574.1 CDS Tola_2391 NC_012691.1 2618162 2619289 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aha:AHA_0918 iron-sulfur cluster-binding protein; iron-sulfur cluster binding protein 2618162..2619289 Tolumonas auensis DSM 9187 7885922 YP_002893575.1 CDS Tola_2392 NC_012691.1 2619299 2620042 D PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein; ROK family protein 2619299..2620042 Tolumonas auensis DSM 9187 7885923 YP_002893576.1 CDS Tola_2393 NC_012691.1 2620089 2620994 R PFAM: band 7 protein; SMART: band 7 protein; KEGG: hflK; hydrolase serine protease transmembrane subunit K protein; hypothetical protein complement(2620089..2620994) Tolumonas auensis DSM 9187 7885924 YP_002893577.1 CDS Tola_2394 NC_012691.1 2621845 2622597 D KEGG: net:Neut_0126 hypothetical protein; hypothetical protein 2621845..2622597 Tolumonas auensis DSM 9187 7885926 YP_002893578.1 CDS Tola_2395 NC_012691.1 2622716 2622955 D PFAM: Prophage CP4-57 regulatory; KEGG: eba:ebD61 transcriptional regulator; phage transcriptional regulator, AlpA 2622716..2622955 Tolumonas auensis DSM 9187 7885927 YP_002893579.1 CDS Tola_2396 NC_012691.1 2622966 2623829 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpt:Bpet1290 hypothetical protein; Cobyrinic acid ac-diamide synthase 2622966..2623829 Tolumonas auensis DSM 9187 7885928 YP_002893580.1 CDS Tola_2397 NC_012691.1 2623813 2624073 D KEGG: bpt:ig_0609 hypothetical protein; hypothetical protein 2623813..2624073 Tolumonas auensis DSM 9187 7885929 YP_002893581.1 CDS Tola_2398 NC_012691.1 2624066 2625802 D KEGG: bpt:Bpet1291 hypothetical protein; hypothetical protein 2624066..2625802 Tolumonas auensis DSM 9187 7885930 YP_002893582.1 CDS Tola_2399 NC_012691.1 2625814 2626374 D KEGG: bpt:Bpet1292 hypothetical protein; hypothetical protein 2625814..2626374 Tolumonas auensis DSM 9187 7885931 YP_002893583.1 CDS Tola_2400 NC_012691.1 2626374 2627579 D KEGG: bpt:Bpet1293 hypothetical protein; hypothetical protein 2626374..2627579 Tolumonas auensis DSM 9187 7885932 YP_002893584.1 CDS Tola_2401 NC_012691.1 2627938 2628726 D PFAM: Domain of unknown function DUF1845; KEGG: mpt:Mpe_A2339 hypothetical protein; hypothetical protein 2627938..2628726 Tolumonas auensis DSM 9187 7885933 YP_002893585.1 CDS Tola_2402 NC_012691.1 2628723 2629253 D KEGG: net:Neut_0118 hypothetical protein; hypothetical protein 2628723..2629253 Tolumonas auensis DSM 9187 7885934 YP_002893586.1 CDS Tola_2403 NC_012691.1 2629327 2629728 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 2629327..2629728 Tolumonas auensis DSM 9187 7885935 YP_002893587.1 CDS Tola_2404 NC_012691.1 2630003 2632012 D KEGG: xca:xccb100_2412 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase III 2630003..2632012 Tolumonas auensis DSM 9187 7885936 YP_002893588.1 CDS Tola_2405 NC_012691.1 2632256 2632486 R hypothetical protein complement(2632256..2632486) Tolumonas auensis DSM 9187 7885937 YP_002893589.1 CDS Tola_2407 NC_012691.1 2632967 2634559 D KEGG: aav:Aave_0555 hypothetical protein; hypothetical protein 2632967..2634559 Tolumonas auensis DSM 9187 7885939 YP_002893590.1 CDS Tola_2408 NC_012691.1 2634921 2635484 D KEGG: bpt:Bpet1043 hypothetical protein; hypothetical protein 2634921..2635484 Tolumonas auensis DSM 9187 7885940 YP_002893591.1 CDS Tola_2410 NC_012691.1 2637424 2637636 D KEGG: har:HEAR1980 hypothetical protein; hypothetical protein 2637424..2637636 Tolumonas auensis DSM 9187 7885942 YP_002893592.1 CDS Tola_2411 NC_012691.1 2637660 2638052 D KEGG: dac:Daci_4153 hypothetical protein; hypothetical protein 2637660..2638052 Tolumonas auensis DSM 9187 7885943 YP_002893593.1 CDS Tola_2412 NC_012691.1 2638150 2638611 D KEGG: ppd:Ppro_0212 hypothetical protein; hypothetical protein 2638150..2638611 Tolumonas auensis DSM 9187 7885944 YP_002893594.1 CDS Tola_2413 NC_012691.1 2638711 2639373 D KEGG: bpt:Bpet1047 hypothetical protein; hypothetical protein 2638711..2639373 Tolumonas auensis DSM 9187 7885945 YP_002893595.1 CDS Tola_2414 NC_012691.1 2639494 2640237 D KEGG: ajs:Ajs_2229 hypothetical protein; hypothetical protein 2639494..2640237 Tolumonas auensis DSM 9187 7885946 YP_002893596.1 CDS Tola_2415 NC_012691.1 2640529 2641341 D KEGG: eba:ebA2454 hypothetical protein; hypothetical protein 2640529..2641341 Tolumonas auensis DSM 9187 7885947 YP_002893597.1 CDS Tola_2416 NC_012691.1 2641935 2642849 D KEGG: pla:Plav_3399 hypothetical protein; hypothetical protein 2641935..2642849 Tolumonas auensis DSM 9187 7885948 YP_002893598.1 CDS Tola_2417 NC_012691.1 2643003 2643830 D PFAM: protein of unknown function DUF932; KEGG: har:HEAR1987 hypothetical protein; hypothetical protein 2643003..2643830 Tolumonas auensis DSM 9187 7885949 YP_002893599.1 CDS Tola_2418 NC_012691.1 2643929 2644621 D KEGG: rme:Rmet_2322 hypothetical protein; hypothetical protein 2643929..2644621 Tolumonas auensis DSM 9187 7885950 YP_002893600.1 CDS Tola_2419 NC_012691.1 2644711 2645052 D KEGG: net:Neut_0108 hypothetical protein; hypothetical protein 2644711..2645052 Tolumonas auensis DSM 9187 7885951 YP_002893601.1 CDS Tola_2420 NC_012691.1 2645136 2645792 D KEGG: net:Neut_0107 hypothetical protein; hypothetical protein 2645136..2645792 Tolumonas auensis DSM 9187 7885952 YP_002893602.1 CDS Tola_2421 NC_012691.1 2645859 2646968 D KEGG: net:Neut_0106 hypothetical protein; hypothetical protein 2645859..2646968 Tolumonas auensis DSM 9187 7885953 YP_002893603.1 CDS Tola_2422 NC_012691.1 2647024 2647344 D KEGG: xcv:XCV2266 hypothetical protein; hypothetical protein 2647024..2647344 Tolumonas auensis DSM 9187 7885954 YP_002893604.1 CDS Tola_2423 NC_012691.1 2647431 2647739 D KEGG: bpt:Bpet4288 hypothetical protein; hypothetical protein 2647431..2647739 Tolumonas auensis DSM 9187 7885955 YP_002893605.1 CDS Tola_2424 NC_012691.1 2647836 2650121 D PFAM: helicase domain protein; SMART: DEAD-like helicase; KEGG: net:Neut_0104 helicase domain-containing protein; helicase domain-containing protein 2647836..2650121 Tolumonas auensis DSM 9187 7885956 YP_002893606.1 CDS Tola_2425 NC_012691.1 2650255 2651031 D KEGG: pla:Plav_3406 hypothetical protein; hypothetical protein 2650255..2651031 Tolumonas auensis DSM 9187 7885957 YP_002893607.1 CDS Tola_2426 NC_012691.1 2651101 2652915 R PFAM: UvrD/REP helicase; KEGG: pla:Plav_3407 UvrD/REP helicase; UvrD/REP helicase complement(2651101..2652915) Tolumonas auensis DSM 9187 7885958 YP_002893608.1 CDS Tola_2427 NC_012691.1 2652902 2654689 R KEGG: xca:xccb100_2436 hypothetical protein YbjD; hypothetical protein complement(2652902..2654689) Tolumonas auensis DSM 9187 7885959 YP_002893609.1 CDS Tola_2428 NC_012691.1 2654915 2655478 D KEGG: bxe:Bxe_A1200 hypothetical protein; hypothetical protein 2654915..2655478 Tolumonas auensis DSM 9187 7885960 YP_002893610.1 CDS Tola_2429 NC_012691.1 2655475 2656134 D KEGG: net:Neut_0102 hypothetical protein; hypothetical protein 2655475..2656134 Tolumonas auensis DSM 9187 7885961 YP_002893611.1 CDS Tola_2430 NC_012691.1 2656147 2656875 D KEGG: ajs:Ajs_1277 putative secreted protein; putative secreted protein 2656147..2656875 Tolumonas auensis DSM 9187 7885962 YP_002893612.1 CDS Tola_2431 NC_012691.1 2656857 2657447 D PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein; Lytic transglycosylase catalytic 2656857..2657447 Tolumonas auensis DSM 9187 7885963 YP_002893613.1 CDS Tola_2432 NC_012691.1 2657444 2657989 D KEGG: xcv:XCV2378 putative secreted protein; putative secreted protein 2657444..2657989 Tolumonas auensis DSM 9187 7885964 YP_002893614.1 CDS Tola_2433 NC_012691.1 2657994 2660183 D KEGG: har:HEAR2005 hypothetical protein; hypothetical protein 2657994..2660183 Tolumonas auensis DSM 9187 7885965 YP_002893615.1 CDS Tola_2434 NC_012691.1 2660180 2660929 D KEGG: pla:Plav_3415 hypothetical protein; hypothetical protein 2660180..2660929 Tolumonas auensis DSM 9187 7885966 YP_002893616.1 CDS Tola_2435 NC_012691.1 2660930 2662300 R KEGG: eba:ebA2418 hypothetical protein; hypothetical protein complement(2660930..2662300) Tolumonas auensis DSM 9187 7885967 YP_002893617.1 CDS Tola_2436 NC_012691.1 2662464 2662841 D KEGG: net:Neut_0094 hypothetical protein; hypothetical protein 2662464..2662841 Tolumonas auensis DSM 9187 7885968 YP_002893618.1 CDS Tola_2437 NC_012691.1 2662838 2663071 D KEGG: xcv:XCV2374 hypothetical protein; hypothetical protein 2662838..2663071 Tolumonas auensis DSM 9187 7885969 YP_002893619.1 CDS Tola_2438 NC_012691.1 2663088 2663450 D KEGG: bxe:Bxe_A1190 hypothetical protein; hypothetical protein 2663088..2663450 Tolumonas auensis DSM 9187 7885970 YP_002893620.1 CDS Tola_2439 NC_012691.1 2663461 2663859 D KEGG: har:HEAR2015 hypothetical protein; hypothetical protein 2663461..2663859 Tolumonas auensis DSM 9187 7885971 YP_002893621.1 CDS Tola_2440 NC_012691.1 2663856 2664536 D KEGG: net:Neut_0090 putative secreted protein; putative secreted protein 2663856..2664536 Tolumonas auensis DSM 9187 7885972 YP_002893622.1 CDS Tola_2441 NC_012691.1 2664533 2665435 D KEGG: ajs:Ajs_1401 putative secreted protein; putative secreted protein 2664533..2665435 Tolumonas auensis DSM 9187 7885973 YP_002893623.1 CDS Tola_2442 NC_012691.1 2665425 2666834 D KEGG: pla:Plav_3422 putative secreted protein; putative secreted protein 2665425..2666834 Tolumonas auensis DSM 9187 7885974 YP_002893624.1 CDS Tola_2443 NC_012691.1 2666815 2667249 D KEGG: net:Neut_0087 putative secreted protein; putative secreted protein 2666815..2667249 Tolumonas auensis DSM 9187 7885975 YP_002893625.1 CDS Tola_2444 NC_012691.1 2667249 2670125 D KEGG: ajs:Ajs_1398 hypothetical protein; hypothetical protein 2667249..2670125 Tolumonas auensis DSM 9187 7885976 YP_002893626.1 CDS Tola_2445 NC_012691.1 2670141 2670899 D KEGG: bcj:BCAL2522 DsbA-thioredoxin family protein; DsbA-thioredoxin family protein 2670141..2670899 Tolumonas auensis DSM 9187 7885977 YP_002893627.1 CDS Tola_2446 NC_012691.1 2671071 2671577 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: bpt:Bpet1083 DNA repair protein RadC-like protein; DNA repair protein RadC 2671071..2671577 Tolumonas auensis DSM 9187 7885978 YP_002893628.1 CDS Tola_2447 NC_012691.1 2671713 2672213 D PFAM: protein of unknown function DUF1525; KEGG: net:Neut_0077 hypothetical protein; hypothetical protein 2671713..2672213 Tolumonas auensis DSM 9187 7885979 YP_002893629.1 CDS Tola_2448 NC_012691.1 2672210 2673142 D PFAM: protein of unknown function DUF1527; KEGG: xcb:XC_1042 hypothetical protein; hypothetical protein 2672210..2673142 Tolumonas auensis DSM 9187 7885980 YP_002893630.1 CDS Tola_2449 NC_012691.1 2673153 2674550 D KEGG: pla:Plav_3429 hypothetical protein; hypothetical protein 2673153..2674550 Tolumonas auensis DSM 9187 7885981 YP_002893631.1 CDS Tola_2450 NC_012691.1 2674547 2674897 D KEGG: bxe:Bxe_A1178 hypothetical protein; hypothetical protein 2674547..2674897 Tolumonas auensis DSM 9187 7885982 YP_002893632.1 CDS Tola_2451 NC_012691.1 2674911 2676431 D KEGG: xcb:XC_2024 hypothetical protein; hypothetical protein 2674911..2676431 Tolumonas auensis DSM 9187 7885983 YP_002893633.1 CDS Tola_2452 NC_012691.1 2676442 2676807 R KEGG: pag:PLES_26451 hypothetical protein; hypothetical protein complement(2676442..2676807) Tolumonas auensis DSM 9187 7885984 YP_002893634.1 CDS Tola_2453 NC_012691.1 2676835 2677293 R KEGG: dac:Daci_4188 hypothetical protein; hypothetical protein complement(2676835..2677293) Tolumonas auensis DSM 9187 7885985 YP_002893635.1 CDS Tola_2454 NC_012691.1 2677293 2677610 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: dac:Daci_4189 AbrB family transcriptional regulator; transcriptional regulator, AbrB family complement(2677293..2677610) Tolumonas auensis DSM 9187 7885986 YP_002893636.1 CDS Tola_2455 NC_012691.1 2677917 2679773 D PFAM: Relaxase; protein of unknown function DUF1528; KEGG: har:HEAR2031 hypothetical protein; Relaxase 2677917..2679773 Tolumonas auensis DSM 9187 7885987 YP_002893637.1 CDS Tola_2457 NC_012691.1 2680241 2681149 R reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2680241..2681149) Tolumonas auensis DSM 9187 7885989 YP_002893638.1 CDS Tola_2458 NC_012691.1 2681151 2682152 R TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: dsh:Dshi_0433 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(2681151..2682152) Tolumonas auensis DSM 9187 7885990 YP_002893639.1 CDS Tola_2459 NC_012691.1 2682171 2683400 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(2682171..2683400) Tolumonas auensis DSM 9187 7885991 YP_002893640.1 CDS Tola_2460 NC_012691.1 2683425 2684870 R PFAM: C4-dicarboxylate anaerobic carrier; KEGG: dsh:Dshi_0431 C4-dicarboxylate anaerobic carrier; C4-dicarboxylate anaerobic carrier complement(2683425..2684870) Tolumonas auensis DSM 9187 7885992 YP_002893641.1 CDS Tola_2461 NC_012691.1 2685394 2687337 R PFAM: Protein of unknown function DUF676 hydrolase domain protein; KEGG: pla:Plav_3441 hypothetical protein; hypothetical protein complement(2685394..2687337) Tolumonas auensis DSM 9187 7885993 YP_002893642.1 CDS Tola_2462 NC_012691.1 2687334 2688377 R KEGG: pla:Plav_3442 hypothetical protein; hypothetical protein complement(2687334..2688377) Tolumonas auensis DSM 9187 7885994 YP_002893643.1 CDS Tola_2463 NC_012691.1 2688377 2689009 R PFAM: regulatory protein TetR; KEGG: rso:RS05643 putative transcription regulator protein; TetR family transcriptional regulator complement(2688377..2689009) Tolumonas auensis DSM 9187 7885995 YP_002893644.1 CDS Tola_2464 NC_012691.1 2689453 2690940 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pla:Plav_3444 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 2689453..2690940 Tolumonas auensis DSM 9187 7885996 YP_002893645.1 CDS Tola_2465 NC_012691.1 2690955 2692034 D PFAM: secretion protein HlyD family protein; KEGG: pla:Plav_3445 secretion protein HlyD family protein; secretion protein HlyD family protein 2690955..2692034 Tolumonas auensis DSM 9187 7885997 YP_002893646.1 CDS Tola_2466 NC_012691.1 2692038 2694806 D PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: pla:Plav_3446 ABC transporter related; ABC transporter 2692038..2694806 Tolumonas auensis DSM 9187 7885998 YP_002893647.1 CDS Tola_2467 NC_012691.1 2694808 2695938 D PFAM: ABC-2 type transporter; KEGG: pla:Plav_3447 ABC-2 type transporter; ABC transporter 2694808..2695938 Tolumonas auensis DSM 9187 7885999 YP_002893648.1 CDS Tola_2468 NC_012691.1 2695986 2696447 D KEGG: pla:Plav_3448 hypothetical protein; hypothetical protein 2695986..2696447 Tolumonas auensis DSM 9187 7885190 YP_002893649.1 CDS Tola_2469 NC_012691.1 2696437 2697183 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pla:Plav_3449 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 2696437..2697183 Tolumonas auensis DSM 9187 7885191 YP_002893650.1 CDS Tola_2470 NC_012691.1 2697269 2699773 D KEGG: pla:Plav_3450 hypothetical protein; hypothetical protein 2697269..2699773 Tolumonas auensis DSM 9187 7885192 YP_002893651.1 CDS Tola_2471 NC_012691.1 2699770 2701191 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: pla:Plav_3451 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2699770..2701191 Tolumonas auensis DSM 9187 7885193 YP_002893652.1 CDS Tola_2472 NC_012691.1 2701235 2701987 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pla:Plav_3452 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2701235..2701987 Tolumonas auensis DSM 9187 7885194 YP_002893653.1 CDS Tola_2473 NC_012691.1 2702064 2703305 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pla:Plav_3453 acetate kinase; acetate kinase 2702064..2703305 Tolumonas auensis DSM 9187 7885195 YP_002893654.1 CDS Tola_2474 NC_012691.1 2703302 2704507 D TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: pla:Plav_3454 sodium/glutamate symporter; sodium/glutamate symporter 2703302..2704507 Tolumonas auensis DSM 9187 7885196 YP_002893655.1 CDS Tola_2475 NC_012691.1 2704688 2706439 D PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: pla:Plav_3455 poly-beta-hydroxybutyrate polymerase domain-containing protein; Poly-beta-hydroxybutyrate polymerase domain-containing protein 2704688..2706439 Tolumonas auensis DSM 9187 7885197 YP_002893656.1 CDS Tola_2476 NC_012691.1 2706526 2707020 D PFAM: UspA domain protein; KEGG: pla:Plav_3456 UspA domain-containing protein; UspA domain-containing protein 2706526..2707020 Tolumonas auensis DSM 9187 7885198 YP_002893657.1 CDS Tola_2477 NC_012691.1 2707017 2708090 D KEGG: pla:Plav_3457 hypothetical protein; hypothetical protein 2707017..2708090 Tolumonas auensis DSM 9187 7885199 YP_002893658.1 CDS Tola_2478 NC_012691.1 2708090 2708221 D hypothetical protein 2708090..2708221 Tolumonas auensis DSM 9187 7885200 YP_002893659.1 CDS Tola_2479 NC_012691.1 2708294 2709190 D Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2708294..2709190 Tolumonas auensis DSM 9187 7885201 YP_002893660.1 CDS Tola_2480 NC_012691.1 2709229 2711607 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: pla:Plav_3459 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 2709229..2711607 Tolumonas auensis DSM 9187 7885202 YP_002893661.1 CDS Tola_2481 NC_012691.1 2711643 2713001 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: pla:Plav_3460 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 2711643..2713001 Tolumonas auensis DSM 9187 7885203 YP_002893662.1 CDS Tola_2482 NC_012691.1 2712998 2714515 D catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 2712998..2714515 Tolumonas auensis DSM 9187 7885204 YP_002893663.1 CDS Tola_2483 NC_012691.1 2714702 2715592 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pla:Plav_3462 LysR family transcriptional regulator; LysR family transcriptional regulator 2714702..2715592 Tolumonas auensis DSM 9187 7885205 YP_002893664.1 CDS Tola_2484 NC_012691.1 2715618 2715911 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bpt:Bpet1273 transcriptional regulator; XRE family transcriptional regulator complement(2715618..2715911) Tolumonas auensis DSM 9187 7885206 YP_002893665.1 CDS Tola_2485 NC_012691.1 2716014 2716655 D PFAM: LysR substrate-binding; KEGG: bpt:Bpet1274 LysR family transcriptional regulator; LysR family transcriptional regulator 2716014..2716655 Tolumonas auensis DSM 9187 7885207 YP_002893666.1 CDS Tola_2486 NC_012691.1 2716714 2718645 R PFAM: integrase family protein; KEGG: pla:Plav_3466 integrase family protein; integrase family protein complement(2716714..2718645) Tolumonas auensis DSM 9187 7885208 YP_002893667.1 CDS Tola_2487 NC_012691.1 2719255 2719800 R PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: aha:AHA_3459 oligoribonuclease; Exonuclease RNase T and DNA polymerase III complement(2719255..2719800) Tolumonas auensis DSM 9187 7885212 YP_002893668.1 CDS Tola_2488 NC_012691.1 2719878 2720912 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 2719878..2720912 Tolumonas auensis DSM 9187 7885213 YP_002893669.1 CDS Tola_2489 NC_012691.1 2720985 2721860 D KEGG: asa:ASA_0856 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 2720985..2721860 Tolumonas auensis DSM 9187 7885214 YP_002893670.1 CDS Tola_2490 NC_012691.1 2722212 2723981 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 2722212..2723981 Tolumonas auensis DSM 9187 7885215 YP_002893671.1 CDS Tola_2491 NC_012691.1 2723981 2724721 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 2723981..2724721 Tolumonas auensis DSM 9187 7885216 YP_002893672.1 CDS Tola_2492 NC_012691.1 2724724 2725128 D PFAM: fumarate reductase subunit C; KEGG: asa:ASA_1103 fumarate reductase, 15 kDa hydrophobic protein; fumarate reductase subunit C 2724724..2725128 Tolumonas auensis DSM 9187 7885217 YP_002893673.1 CDS Tola_2493 NC_012691.1 2725143 2725493 D PFAM: fumarate reductase D subunit; KEGG: asa:ASA_1102 fumarate reductase, 13 kDa hydrophobic protein; fumarate reductase D subunit 2725143..2725493 Tolumonas auensis DSM 9187 7885218 YP_002893674.1 CDS Tola_2494 NC_012691.1 2725604 2726647 D catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 2725604..2726647 Tolumonas auensis DSM 9187 7885219 YP_002893675.1 CDS Tola_2495 NC_012691.1 2726677 2727594 R PFAM: Auxin Efflux Carrier; KEGG: bce:BC2130 transporter; auxin efflux carrier family protein complement(2726677..2727594) Tolumonas auensis DSM 9187 7885220 YP_002893676.1 CDS Tola_2496 NC_012691.1 2727678 2728355 R KEGG: shm:Shewmr7_1917 radical activating enzyme; radical activating enzyme complement(2727678..2728355) Tolumonas auensis DSM 9187 7885221 YP_002893677.1 CDS Tola_2497 NC_012691.1 2728427 2728876 R TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: kpe:KPK_5071 ribosomal protein L9; 50S ribosomal protein L9 complement(2728427..2728876) Tolumonas auensis DSM 9187 7885222 YP_002893678.1 CDS rpsR NC_012691.1 2728916 2729146 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(2728916..2729146) Tolumonas auensis DSM 9187 7885223 YP_002893679.1 CDS rpsF NC_012691.1 2729174 2729548 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(2729174..2729548) Tolumonas auensis DSM 9187 7885224 YP_002893680.1 CDS Tola_2500 NC_012691.1 2729717 2730358 D KEGG: eca:ECA3597 methionine sulfoxide reductase A; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 2729717..2730358 Tolumonas auensis DSM 9187 7885225 YP_002893681.1 CDS Tola_2501 NC_012691.1 2730411 2731610 R KEGG: esa:ESA_01968 hypothetical protein; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase complement(2730411..2731610) Tolumonas auensis DSM 9187 7885226 YP_002893682.1 CDS Tola_2502 NC_012691.1 2731801 2733258 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2731801..2733258) Tolumonas auensis DSM 9187 7885227 YP_002893683.1 CDS Tola_2503 NC_012691.1 2733411 2733677 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: vfm:VFMJ11_0733 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 2733411..2733677 Tolumonas auensis DSM 9187 7885228 YP_002893684.1 CDS Tola_2504 NC_012691.1 2733678 2734568 D PFAM: Polyprenyl synthetase; KEGG: asa:ASA_0991 geranyltranstransferase; polyprenyl synthetase 2733678..2734568 Tolumonas auensis DSM 9187 7885229 YP_002893685.1 CDS Tola_2505 NC_012691.1 2734568 2736451 D TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: asa:ASA_0990 1-deoxyxylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 2734568..2736451 Tolumonas auensis DSM 9187 7885230 YP_002893686.1 CDS Tola_2506 NC_012691.1 2736532 2736957 R KEGG: efe:EFER_3499 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase complement(2736532..2736957) Tolumonas auensis DSM 9187 7885231 YP_002893687.1 CDS Tola_2507 NC_012691.1 2736980 2737288 R SMART: regulatory protein ArsR; KEGG: sea:SeAg_B2124 arsenic resistance transcriptional regulator; ArsR family transcriptional regulator complement(2736980..2737288) Tolumonas auensis DSM 9187 7885232 YP_002893688.1 CDS Tola_2508 NC_012691.1 2737358 2738293 R PFAM: Auxin Efflux Carrier; KEGG: eca:ECA4317 putative transporter; auxin efflux carrier family protein complement(2737358..2738293) Tolumonas auensis DSM 9187 7885233 YP_002893689.1 CDS Tola_2509 NC_012691.1 2738477 2739283 D KEGG: lpp:lpp1693 hypothetical protein; hypothetical protein 2738477..2739283 Tolumonas auensis DSM 9187 7885234 YP_002893690.1 CDS Tola_2510 NC_012691.1 2739364 2740299 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_0989 dipeptide transport system permease protein DppC; binding-protein-dependent transport system inner membrane protein complement(2739364..2740299) Tolumonas auensis DSM 9187 7885235 YP_002893691.1 CDS Tola_2511 NC_012691.1 2740301 2741278 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vco:VC0395_A2565 peptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(2740301..2741278) Tolumonas auensis DSM 9187 7885236 YP_002893692.1 CDS Tola_2512 NC_012691.1 2741347 2742903 R PFAM: extracellular solute-binding protein family 5; KEGG: vvu:VV1_1086 peptide ABC transporter, periplasmic peptide-binding protein; family 5 extracellular solute-binding protein complement(2741347..2742903) Tolumonas auensis DSM 9187 7885237 YP_002893693.1 CDS Tola_2513 NC_012691.1 2742922 2744673 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: asa:ASA_0986 dipeptide transport system ATP-binding protein DppD; ABC transporter complement(2742922..2744673) Tolumonas auensis DSM 9187 7885238 YP_002893694.1 CDS Tola_2514 NC_012691.1 2745082 2747196 R KEGG: aha:AHA_0696 putative type IV pilin; putative type IV pilin complement(2745082..2747196) Tolumonas auensis DSM 9187 7885239 YP_002893695.1 CDS Tola_2515 NC_012691.1 2747210 2748406 R KEGG: aha:AHA_0695 hypothetical protein; hypothetical protein complement(2747210..2748406) Tolumonas auensis DSM 9187 7885240 YP_002893696.1 CDS Tola_2516 NC_012691.1 2748393 2749127 R KEGG: aha:AHA_0694 putative type IV pilin; putative type IV pilin complement(2748393..2749127) Tolumonas auensis DSM 9187 7885241 YP_002893697.1 CDS Tola_2517 NC_012691.1 2749112 2749648 R KEGG: aha:AHA_0693 putative type IV pilin; putative type IV pilin complement(2749112..2749648) Tolumonas auensis DSM 9187 7885242 YP_002893698.1 CDS Tola_2518 NC_012691.1 2749743 2750129 D KEGG: aha:AHA_0692 type IV pilin; type IV pilin 2749743..2750129 Tolumonas auensis DSM 9187 7885243 YP_002893699.1 CDS Tola_2519 NC_012691.1 2750185 2750688 R PFAM: phosphatidylglycerophosphatase A; KEGG: asa:ASA_0985 phosphatidylglycerophosphatase A; Phosphatidylglycerophosphatase complement(2750185..2750688) Tolumonas auensis DSM 9187 7885244 YP_002893700.1 CDS Tola_2520 NC_012691.1 2750663 2751649 R KEGG: asa:ASA_0984 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(2750663..2751649) Tolumonas auensis DSM 9187 7885245 YP_002893701.1 CDS Tola_2521 NC_012691.1 2751743 2752159 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: asa:ASA_0983 antitermination protein NusB; NusB antitermination factor complement(2751743..2752159) Tolumonas auensis DSM 9187 7885246 YP_002893702.1 CDS Tola_2522 NC_012691.1 2752173 2752643 R KEGG: pmu:PM0731 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(2752173..2752643) Tolumonas auensis DSM 9187 7885247 YP_002893703.1 CDS Tola_2523 NC_012691.1 2752735 2753841 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: aha:AHA_3331 riboflavin biosynthesis protein RibA; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2752735..2753841) Tolumonas auensis DSM 9187 7885248 YP_002893704.1 CDS Tola_2524 NC_012691.1 2753859 2754518 R KEGG: ppr:PBPRA0798 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(2753859..2754518) Tolumonas auensis DSM 9187 7885249 YP_002893705.1 CDS Tola_2525 NC_012691.1 2754528 2755640 R KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(2754528..2755640) Tolumonas auensis DSM 9187 7885250 YP_002893706.1 CDS nrdR NC_012691.1 2755641 2756090 R PFAM: ATP-cone domain protein; KEGG: aha:AHA_3334 NrdR family transcriptional regulator; transcriptional regulator NrdR complement(2755641..2756090) Tolumonas auensis DSM 9187 7885251 YP_002893707.1 CDS Tola_2527 NC_012691.1 2756204 2757457 R PFAM: glycine hydroxymethyltransferase; Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; KEGG: shn:Shewana3_1094 serine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(2756204..2757457) Tolumonas auensis DSM 9187 7885252 YP_002893708.1 CDS Tola_2528 NC_012691.1 2757771 2758229 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2757771..2758229 Tolumonas auensis DSM 9187 7885253 YP_002893709.1 CDS Tola_2529 NC_012691.1 2758261 2758707 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: aha:AHA_3346 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 2758261..2758707 Tolumonas auensis DSM 9187 7885254 YP_002893710.1 CDS Tola_2530 NC_012691.1 2758719 2760059 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: asa:ASA_0964 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 2758719..2760059 Tolumonas auensis DSM 9187 7885255 YP_002893711.1 CDS Tola_2531 NC_012691.1 2760187 2761500 D KEGG: asa:ASA_0961 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific; hypothetical protein 2760187..2761500 Tolumonas auensis DSM 9187 7885256 YP_002893712.1 CDS prmA NC_012691.1 2761585 2762463 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 2761585..2762463 Tolumonas auensis DSM 9187 7885257 YP_002893713.1 CDS Tola_2533 NC_012691.1 2762633 2763601 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; NADH:flavin oxidoreductase/NADH oxidase; KEGG: asa:ASA_0808 tRNA-dihydrouridine synthase B; nifR3 family TIM-barrel protein 2762633..2763601 Tolumonas auensis DSM 9187 7885258 YP_002893714.1 CDS fis NC_012691.1 2763620 2763919 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 2763620..2763919 Tolumonas auensis DSM 9187 7885259 YP_002893715.1 CDS Tola_2535 NC_012691.1 2764299 2765921 D PFAM: sulfatase; KEGG: esa:ESA_02525 hypothetical protein; sulfatase 2764299..2765921 Tolumonas auensis DSM 9187 7885260 YP_002893716.1 CDS Tola_2536 NC_012691.1 2766061 2767512 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_1251 putative molybdenum transport ATP-binding protein ModF; ABC transporter 2766061..2767512 Tolumonas auensis DSM 9187 7885261 YP_002893717.1 CDS Tola_2537 NC_012691.1 2767514 2767996 R PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_2066 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2767514..2767996) Tolumonas auensis DSM 9187 7885262 YP_002893718.1 CDS Tola_2538 NC_012691.1 2768117 2768617 D KEGG: asa:ASA_3605 hypothetical protein; hypothetical protein 2768117..2768617 Tolumonas auensis DSM 9187 7885263 YP_002893719.1 CDS Tola_2539 NC_012691.1 2768703 2769305 R TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: vvu:VV1_0705 aromatic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2768703..2769305) Tolumonas auensis DSM 9187 7885264 YP_002893720.1 CDS Tola_2540 NC_012691.1 2769308 2770678 R TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aha:AHA_3549 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(2769308..2770678) Tolumonas auensis DSM 9187 7885265 YP_002893721.1 CDS Tola_2541 NC_012691.1 2770838 2771371 D PFAM: Inorganic pyrophosphatase; KEGG: asa:ASA_0770 inorganic pyrophosphatase; inorganic diphosphatase 2770838..2771371 Tolumonas auensis DSM 9187 7885266 YP_002893722.1 CDS Tola_2542 NC_012691.1 2771449 2771547 R hypothetical protein complement(2771449..2771547) Tolumonas auensis DSM 9187 7885267 YP_002893723.1 CDS Tola_2543 NC_012691.1 2771700 2772296 R KEGG: ppr:PBPRA3308 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase complement(2771700..2772296) Tolumonas auensis DSM 9187 7885268 YP_002893724.1 CDS cysN NC_012691.1 2772511 2773929 R may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 complement(2772511..2773929) Tolumonas auensis DSM 9187 7885269 YP_002893725.1 CDS Tola_2545 NC_012691.1 2773969 2774883 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2773969..2774883) Tolumonas auensis DSM 9187 7885270 YP_002893726.1 CDS Tola_2546 NC_012691.1 2774931 2776337 R TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aha:AHA_3568 siroheme synthase; uroporphyrin-III C-methyltransferase complement(2774931..2776337) Tolumonas auensis DSM 9187 7883397 YP_002893727.1 CDS Tola_2547 NC_012691.1 2776645 2777565 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: asa:ASA_3525 membrane protease; hypothetical protein 2776645..2777565 Tolumonas auensis DSM 9187 7883398 YP_002893728.1 CDS Tola_2548 NC_012691.1 2777568 2778038 D PFAM: protein of unknown function DUF107; KEGG: vpa:VP0804 hypothetical protein; hypothetical protein 2777568..2778038 Tolumonas auensis DSM 9187 7883399 YP_002893729.1 CDS Tola_2549 NC_012691.1 2778306 2779295 R oxidizes malate to oxaloacetate; malate dehydrogenase complement(2778306..2779295) Tolumonas auensis DSM 9187 7883400 YP_002893730.1 CDS Tola_2550 NC_012691.1 2779590 2780060 D regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 2779590..2780060 Tolumonas auensis DSM 9187 7883401 YP_002893731.1 CDS Tola_2551 NC_012691.1 2780132 2781742 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: yen:YE2505 sensory histidine kinase DcuS; signal transduction histidine kinase regulating citrate/malate metabolism complement(2780132..2781742) Tolumonas auensis DSM 9187 7883402 YP_002893732.1 CDS Tola_2552 NC_012691.1 2781960 2783609 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: cko:CKO_03749 hypothetical protein; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta complement(2781960..2783609) Tolumonas auensis DSM 9187 7883403 YP_002893733.1 CDS Tola_2553 NC_012691.1 2783724 2785235 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ent:Ent638_2559 anion transporter; anion transporter complement(2783724..2785235) Tolumonas auensis DSM 9187 7883404 YP_002893734.1 CDS Tola_2554 NC_012691.1 2786113 2788893 D TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpe:KPK_2907 oxidoreductase, FAD/FMN-binding/flavocytochrome c; flavocytochrome c 2786113..2788893 Tolumonas auensis DSM 9187 7883405 YP_002893735.1 CDS Tola_2555 NC_012691.1 2788898 2789929 D PFAM: ApbE family lipoprotein; KEGG: ent:Ent638_2557 ApbE family lipoprotein; ApbE family lipoprotein 2788898..2789929 Tolumonas auensis DSM 9187 7883406 YP_002893736.1 CDS Tola_2556 NC_012691.1 2789954 2790688 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eta:ETA_19240 response regulator in two-component regulatory system with DcuS; response regulator receiver complement(2789954..2790688) Tolumonas auensis DSM 9187 7883407 YP_002893737.1 CDS Tola_2557 NC_012691.1 2790796 2791830 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA3182 putative iron(III) ABC transporter, ATP-binding protein; ABC transporter complement(2790796..2791830) Tolumonas auensis DSM 9187 7883408 YP_002893738.1 CDS Tola_2558 NC_012691.1 2791827 2793461 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_0651 ABC-type iron(III) transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(2791827..2793461) Tolumonas auensis DSM 9187 7883409 YP_002893739.1 CDS Tola_2559 NC_012691.1 2793471 2794469 R PFAM: extracellular solute-binding protein family 1; KEGG: aha:AHA_0650 iron binding protein FbpA; extracellular solute-binding protein complement(2793471..2794469) Tolumonas auensis DSM 9187 7883410 YP_002893740.1 CDS Tola_2560 NC_012691.1 2794682 2795020 R PFAM: nitrogen regulatory protein P-II; KEGG: asa:ASA_0649 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2794682..2795020) Tolumonas auensis DSM 9187 7883411 YP_002893741.1 CDS Tola_2561 NC_012691.1 2795223 2795591 R PFAM: conserved hypothetical protein; KEGG: asa:ASA_0639 hypothetical protein; hypothetical protein complement(2795223..2795591) Tolumonas auensis DSM 9187 7883412 YP_002893742.1 CDS Tola_2562 NC_012691.1 2795783 2798380 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(2795783..2798380) Tolumonas auensis DSM 9187 7883413 YP_002893743.1 CDS Tola_2563 NC_012691.1 2798529 2798735 R KEGG: asa:ASA_0423 hypothetical protein; hypothetical protein complement(2798529..2798735) Tolumonas auensis DSM 9187 7883414 YP_002893744.1 CDS Tola_2564 NC_012691.1 2798998 2799381 D TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: net:Neut_1274 CrcB protein; CrcB protein 2798998..2799381 Tolumonas auensis DSM 9187 7883415 YP_002893745.1 CDS Tola_2565 NC_012691.1 2799406 2799723 D KEGG: rfr:Rfer_1947 hypothetical protein; hypothetical protein 2799406..2799723 Tolumonas auensis DSM 9187 7883416 YP_002893746.1 CDS Tola_2566 NC_012691.1 2799758 2801029 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2799758..2801029) Tolumonas auensis DSM 9187 7883417 YP_002893747.1 CDS Tola_2567 NC_012691.1 2801153 2801338 R KEGG: pde:Pden_4698 hypothetical protein; hypothetical protein complement(2801153..2801338) Tolumonas auensis DSM 9187 7883418 YP_002893748.1 CDS Tola_2568 NC_012691.1 2801539 2802567 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_2439 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 2801539..2802567 Tolumonas auensis DSM 9187 7883419 YP_002893749.1 CDS Tola_2569 NC_012691.1 2802557 2805718 D PFAM: acriflavin resistance protein; KEGG: spc:Sputcn32_2474 acriflavin resistance protein; acriflavin resistance protein 2802557..2805718 Tolumonas auensis DSM 9187 7883420 YP_002893750.1 CDS Tola_2570 NC_012691.1 2805755 2806966 R TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: eum:ECUMN_4818 putative chromate ion transporter; chromate ion transporter family chromate transporter complement(2805755..2806966) Tolumonas auensis DSM 9187 7883421 YP_002893751.1 CDS Tola_2571 NC_012691.1 2807084 2807500 D KEGG: aha:AHA_1743 hypothetical protein; hypothetical protein 2807084..2807500 Tolumonas auensis DSM 9187 7883422 YP_002893752.1 CDS Tola_2572 NC_012691.1 2807543 2808898 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: vsa:VSAL_I1306 putative HTH-type trancriptional regulator, GntR family; GntR family transcriptional regulator complement(2807543..2808898) Tolumonas auensis DSM 9187 7883423 YP_002893753.1 CDS Tola_2573 NC_012691.1 2809088 2809963 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: vfi:VF_A0173 3-hydroxyisobutyrate dehydrogenase; 2-hydroxy-3-oxopropionate reductase 2809088..2809963 Tolumonas auensis DSM 9187 7883424 YP_002893754.1 CDS Tola_2574 NC_012691.1 2810021 2811448 R E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2810021..2811448) Tolumonas auensis DSM 9187 7883425 YP_002893755.1 CDS Tola_2575 NC_012691.1 2811524 2813413 R KEGG: aha:AHA_3862 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(2811524..2813413) Tolumonas auensis DSM 9187 7883426 YP_002893756.1 CDS aceE NC_012691.1 2813425 2816097 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2813425..2816097) Tolumonas auensis DSM 9187 7883427 YP_002893757.1 CDS pdhR NC_012691.1 2816140 2816898 R activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR complement(2816140..2816898) Tolumonas auensis DSM 9187 7883428 YP_002893758.1 CDS Tola_2578 NC_012691.1 2817060 2818220 R regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR complement(2817060..2818220) Tolumonas auensis DSM 9187 7883429 YP_002893759.1 CDS Tola_2579 NC_012691.1 2818355 2819491 R KEGG: kpe:KPK_0993 putative glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase complement(2818355..2819491) Tolumonas auensis DSM 9187 7883430 YP_002893760.1 CDS garR NC_012691.1 2819597 2820487 R catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase complement(2819597..2820487) Tolumonas auensis DSM 9187 7883431 YP_002893761.1 CDS Tola_2581 NC_012691.1 2820575 2821345 R cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase complement(2820575..2821345) Tolumonas auensis DSM 9187 7883432 YP_002893762.1 CDS Tola_2582 NC_012691.1 2821397 2822734 R KEGG: eca:ECA3575 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase complement(2821397..2822734) Tolumonas auensis DSM 9187 7883433 YP_002893763.1 CDS Tola_2583 NC_012691.1 2822788 2824122 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3576 glucarate dehydratase; glucarate dehydratase complement(2822788..2824122) Tolumonas auensis DSM 9187 7883434 YP_002893764.1 CDS Tola_2584 NC_012691.1 2824154 2825494 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA3577 glucarate transporter; d-galactonate transporter complement(2824154..2825494) Tolumonas auensis DSM 9187 7883435 YP_002893765.1 CDS Tola_2585 NC_012691.1 2826059 2827624 D KEGG: eca:ECA3578 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 2826059..2827624 Tolumonas auensis DSM 9187 7883436 YP_002893766.1 CDS Tola_2586 NC_012691.1 2827625 2828185 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: asa:ASA_0417 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(2827625..2828185) Tolumonas auensis DSM 9187 7883437 YP_002893767.1 CDS Tola_2587 NC_012691.1 2828294 2829133 D KEGG: aha:AHA_3867 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2828294..2829133 Tolumonas auensis DSM 9187 7883438 YP_002893768.1 CDS Tola_2588 NC_012691.1 2829193 2830005 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: vfi:VF_A0956 hydrolase; cof family hydrolase complement(2829193..2830005) Tolumonas auensis DSM 9187 7883439 YP_002893769.1 CDS Tola_2589 NC_012691.1 2830552 2831925 D TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: asa:ASA_1257 sodium/alanine symporter; amino acid carrier protein 2830552..2831925 Tolumonas auensis DSM 9187 7883440 YP_002893770.1 CDS Tola_2590 NC_012691.1 2831988 2832263 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: asa:ASA_3644 DNA-binding protein HU alpha; histone family protein DNA-binding protein complement(2831988..2832263) Tolumonas auensis DSM 9187 7883441 YP_002893771.1 CDS Tola_2591 NC_012691.1 2832459 2833037 R PFAM: protein of unknown function DUF416; KEGG: asa:ASA_0564 hypothetical protein; hypothetical protein complement(2832459..2833037) Tolumonas auensis DSM 9187 7883442 YP_002893772.1 CDS Tola_2592 NC_012691.1 2833310 2834887 D PFAM: Peptidase M23; KEGG: aha:AHA_3724 metalloprotease opacity-associated protein A family; peptidase M23 2833310..2834887 Tolumonas auensis DSM 9187 7883443 YP_002893773.1 CDS Tola_2593 NC_012691.1 2834950 2836017 R KEGG: apl:APL_0112 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(2834950..2836017) Tolumonas auensis DSM 9187 7883444 YP_002893774.1 CDS Tola_2594 NC_012691.1 2836236 2836742 D binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 2836236..2836742 Tolumonas auensis DSM 9187 7883445 YP_002893775.1 CDS Tola_2595 NC_012691.1 2836814 2838178 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2836814..2838178) Tolumonas auensis DSM 9187 7883446 YP_002893776.1 CDS Tola_2596 NC_012691.1 2838366 2839364 R KEGG: asa:ASA_3650 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB complement(2838366..2839364) Tolumonas auensis DSM 9187 7883447 YP_002893777.1 CDS Tola_2597 NC_012691.1 2839447 2840157 R TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: aha:AHA_3687 purine nucleoside phosphorylase; purine nucleoside phosphorylase complement(2839447..2840157) Tolumonas auensis DSM 9187 7883448 YP_002893778.1 CDS Tola_2598 NC_012691.1 2840172 2841398 R KEGG: aha:AHA_3688 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein; phosphopentomutase complement(2840172..2841398) Tolumonas auensis DSM 9187 7883449 YP_002893779.1 CDS Tola_2599 NC_012691.1 2841406 2842737 R KEGG: aha:AHA_3689 thymidine phosphorylase; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; thymidine phosphorylase complement(2841406..2842737) Tolumonas auensis DSM 9187 7883450 YP_002893780.1 CDS Tola_2600 NC_012691.1 2842764 2843534 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2842764..2843534) Tolumonas auensis DSM 9187 7883451 YP_002893781.1 CDS Tola_2601 NC_012691.1 2843596 2844366 R PFAM: TatD-related deoxyribonuclease; KEGG: vha:VIBHAR_03379 hypothetical protein; TatD-related deoxyribonuclease complement(2843596..2844366) Tolumonas auensis DSM 9187 7883452 YP_002893782.1 CDS Tola_2602 NC_012691.1 2844424 2845233 R KEGG: hhe:HH1782 hypothetical protein; hypothetical protein complement(2844424..2845233) Tolumonas auensis DSM 9187 7883453 YP_002893783.1 CDS Tola_2603 NC_012691.1 2845436 2847022 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ses:SARI_03020 peptide chain release factor 3; peptide chain release factor 3 complement(2845436..2847022) Tolumonas auensis DSM 9187 7883454 YP_002893784.1 CDS Tola_2604 NC_012691.1 2847176 2847778 R PFAM: protein of unknown function DUF161; KEGG: asa:ASA_3337 hypothetical protein; hypothetical protein complement(2847176..2847778) Tolumonas auensis DSM 9187 7883455 YP_002893785.1 CDS Tola_2605 NC_012691.1 2848110 2848847 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: aha:AHA_0703 RNA methyltransferase; TrmH family RNA methyltransferase complement(2848110..2848847) Tolumonas auensis DSM 9187 7883456 YP_002893786.1 CDS Tola_2606 NC_012691.1 2848844 2851264 R KEGG: aha:AHA_0702 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; Ribonuclease R winged-helix domain protein; SMART: RNA binding S1 domain protein; Cold shock protein; ribonuclease R complement(2848844..2851264) Tolumonas auensis DSM 9187 7883457 YP_002893787.1 CDS Tola_2607 NC_012691.1 2851362 2852264 R Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR complement(2851362..2852264) Tolumonas auensis DSM 9187 7883458 YP_002893788.1 CDS Tola_2608 NC_012691.1 2852422 2852820 D PFAM: cytochrome b562; KEGG: ypb:YPTS_3725 cytochrome b562; cytochrome b562 2852422..2852820 Tolumonas auensis DSM 9187 7883459 YP_002893789.1 CDS Tola_2609 NC_012691.1 2852884 2853384 R KEGG: asa:ASA_0852 hypothetical protein; hypothetical protein complement(2852884..2853384) Tolumonas auensis DSM 9187 7883460 YP_002893790.1 CDS Tola_2610 NC_012691.1 2853482 2853706 R KEGG: asa:ASA_1132 hypothetical protein; hypothetical protein complement(2853482..2853706) Tolumonas auensis DSM 9187 7883461 YP_002893791.1 CDS Tola_2611 NC_012691.1 2853779 2854783 R KEGG: aha:AHA_3183 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase complement(2853779..2854783) Tolumonas auensis DSM 9187 7883462 YP_002893792.1 CDS Tola_2612 NC_012691.1 2854793 2855476 R TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vfi:VF_2287 phosphoglycolate phosphatase; phosphoglycolate phosphatase complement(2854793..2855476) Tolumonas auensis DSM 9187 7883463 YP_002893793.1 CDS Tola_2613 NC_012691.1 2855469 2856149 R KEGG: saz:Sama_3362 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2855469..2856149) Tolumonas auensis DSM 9187 7883464 YP_002893794.1 CDS Tola_2614 NC_012691.1 2856162 2857001 R KEGG: asa:ASA_1128 DNA adenine methyltransferase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(2856162..2857001) Tolumonas auensis DSM 9187 7883465 YP_002893795.1 CDS Tola_2615 NC_012691.1 2857098 2858654 R PFAM: Sporulation domain protein; KEGG: asa:ASA_1127 hypothetical protein; sporulation domain-containing protein complement(2857098..2858654) Tolumonas auensis DSM 9187 7883466 YP_002893796.1 CDS aroB NC_012691.1 2858657 2859733 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(2858657..2859733) Tolumonas auensis DSM 9187 7883467 YP_002893797.1 CDS Tola_2617 NC_012691.1 2859759 2860277 R PFAM: shikimate kinase; KEGG: aha:AHA_3189 shikimate kinase; shikimate kinase complement(2859759..2860277) Tolumonas auensis DSM 9187 7883468 YP_002893798.1 CDS Tola_2618 NC_012691.1 2860802 2861674 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: asa:ASA_0499 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2860802..2861674 Tolumonas auensis DSM 9187 7883469 YP_002893799.1 CDS Tola_2619 NC_012691.1 2861694 2862323 D TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_3798 CbbY family protein; beta-phosphoglucomutase family hydrolase 2861694..2862323 Tolumonas auensis DSM 9187 7883470 YP_002893800.1 CDS Tola_2620 NC_012691.1 2862402 2862746 R TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: asa:ASA_0503 putative Hfq family protein; RNA chaperone Hfq complement(2862402..2862746) Tolumonas auensis DSM 9187 7883471 YP_002893801.1 CDS Tola_2621 NC_012691.1 2862857 2864380 R PFAM: Ig domain protein group 1 domain protein; KEGG: swp:swp_0520 Ig-like, group 1; Ig domain-containing protein complement(2862857..2864380) Tolumonas auensis DSM 9187 7883472 YP_002893802.1 CDS Tola_2622 NC_012691.1 2864518 2867064 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: asa:ASA_1119 penicillin-binding protein 1A; penicillin-binding protein complement(2864518..2867064) Tolumonas auensis DSM 9187 7883473 YP_002893803.1 CDS Tola_2623 NC_012691.1 2867241 2868311 D TIGRFAM: type IV pilus assembly protein PilM; KEGG: aha:AHA_3194 type IV pilus biogenesis protein PilM; type IV pilus assembly protein PilM 2867241..2868311 Tolumonas auensis DSM 9187 7883474 YP_002893804.1 CDS Tola_2624 NC_012691.1 2868299 2868868 D PFAM: Fimbrial assembly family protein; KEGG: aha:AHA_3193 type IV pilus biogenesis PilN; fimbrial assembly family protein 2868299..2868868 Tolumonas auensis DSM 9187 7883475 YP_002893805.1 CDS Tola_2625 NC_012691.1 2868886 2869533 D PFAM: Pilus assembly protein PilO; KEGG: aha:AHA_3192 type IV pilus biogenesis protein PilO; Pilus assembly protein PilO 2868886..2869533 Tolumonas auensis DSM 9187 7883476 YP_002893806.1 CDS Tola_2626 NC_012691.1 2869530 2870075 D PFAM: Pilus assembly protein PilP; KEGG: asa:ASA_1123 type IV pilus biogenesis protein TapP; Pilus assembly protein PilP 2869530..2870075 Tolumonas auensis DSM 9187 7883477 YP_002893807.1 CDS Tola_2627 NC_012691.1 2870079 2872187 D TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: aha:AHA_3190 type IV pilus secretin PilQ; type IV pilus secretin PilQ 2870079..2872187 Tolumonas auensis DSM 9187 7885433 YP_002893808.1 CDS Tola_2628 NC_012691.1 2872274 2873326 D PFAM: methyltransferase small; Methyltransferase type 12; Methyltransferase small domain protein; KEGG: aha:AHA_3802 ribosomal RNA small subunit methyltransferase C (rRNA(guanine-N(2)-)-methyltransferase); rRNA (guanine-N(2)-)-methyltransferase 2872274..2873326 Tolumonas auensis DSM 9187 7885434 YP_002893809.1 CDS glgC NC_012691.1 2873679 2874893 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2873679..2874893 Tolumonas auensis DSM 9187 7885435 YP_002893810.1 CDS glgA NC_012691.1 2874897 2876345 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 2874897..2876345 Tolumonas auensis DSM 9187 7885436 YP_002893811.1 CDS Tola_2631 NC_012691.1 2876896 2878239 R TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM; KEGG: asa:ASA_3662 RNA methyltransferase; RNA methyltransferase, TrmA family complement(2876896..2878239) Tolumonas auensis DSM 9187 7885440 YP_002893812.1 CDS Tola_2632 NC_012691.1 2878345 2879325 R PFAM: Aldose 1-epimerase; KEGG: asa:ASA_0208 galactose mutarotase; aldose 1-epimerase complement(2878345..2879325) Tolumonas auensis DSM 9187 7885441 YP_002893813.1 CDS Tola_2633 NC_012691.1 2879339 2880493 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(2879339..2880493) Tolumonas auensis DSM 9187 7885442 YP_002893814.1 CDS Tola_2634 NC_012691.1 2880504 2881541 R KEGG: kpn:KPN_00772 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase complement(2880504..2881541) Tolumonas auensis DSM 9187 7885443 YP_002893815.1 CDS Tola_2635 NC_012691.1 2881545 2882558 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: asa:ASA_0211 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(2881545..2882558) Tolumonas auensis DSM 9187 7885444 YP_002893816.1 CDS Tola_2636 NC_012691.1 2882793 2883806 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: aha:AHA_4102 transcriptional regulator GalR; transcriptional regulator, LacI family 2882793..2883806 Tolumonas auensis DSM 9187 7885445 YP_002893817.1 CDS mglC NC_012691.1 2883993 2884994 R ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein complement(2883993..2884994) Tolumonas auensis DSM 9187 7885446 YP_002893818.1 CDS Tola_2638 NC_012691.1 2885011 2886531 R with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein complement(2885011..2886531) Tolumonas auensis DSM 9187 7885447 YP_002893819.1 CDS Tola_2639 NC_012691.1 2886607 2887596 R KEGG: yen:YE2815 galactose-binding protein; galactose-binding protein complement(2886607..2887596) Tolumonas auensis DSM 9187 7885448 YP_002893820.1 CDS Tola_2640 NC_012691.1 2888430 2888837 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2888430..2888837 Tolumonas auensis DSM 9187 7885449 YP_002893821.1 CDS Tola_2641 NC_012691.1 2888852 2889523 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2888852..2889523 Tolumonas auensis DSM 9187 7885450 YP_002893822.1 CDS Tola_2642 NC_012691.1 2889531 2891342 D NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2889531..2891342 Tolumonas auensis DSM 9187 7885451 YP_002893823.1 CDS Tola_2643 NC_012691.1 2891345 2891845 D TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: ent:Ent638_2829 NADH dehydrogenase subunit E; NADH-quinone oxidoreductase subunit E 2891345..2891845 Tolumonas auensis DSM 9187 7885452 YP_002893824.1 CDS Tola_2644 NC_012691.1 2891842 2893176 D KEGG: sgl:SG1597 NADH dehydrogenase I subunit F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 2891842..2893176 Tolumonas auensis DSM 9187 7885453 YP_002893825.1 CDS Tola_2645 NC_012691.1 2893231 2895957 D TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; ferredoxin; KEGG: asa:ASA_1731 NADH dehydrogenase subunit G; NADH-quinone oxidoreductase subunit G 2893231..2895957 Tolumonas auensis DSM 9187 7885454 YP_002893826.1 CDS Tola_2646 NC_012691.1 2895954 2896928 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2895954..2896928 Tolumonas auensis DSM 9187 7885455 YP_002893827.1 CDS Tola_2647 NC_012691.1 2896939 2897481 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2896939..2897481 Tolumonas auensis DSM 9187 7885456 YP_002893828.1 CDS Tola_2648 NC_012691.1 2897495 2898022 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ent:Ent638_2824 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 2897495..2898022 Tolumonas auensis DSM 9187 7885457 YP_002893829.1 CDS Tola_2649 NC_012691.1 2898019 2898327 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: asa:ASA_1727 NADH dehydrogenase I, K subunit; NADH-ubiquinone oxidoreductase chain 4L 2898019..2898327 Tolumonas auensis DSM 9187 7885458 YP_002893830.1 CDS Tola_2650 NC_012691.1 2898324 2900162 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2898324..2900162 Tolumonas auensis DSM 9187 7885459 YP_002893831.1 CDS Tola_2651 NC_012691.1 2900173 2901693 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eca:ECA3017 NADH dehydrogenase subunit M; proton-translocating NADH-quinone oxidoreductase subunit M 2900173..2901693 Tolumonas auensis DSM 9187 7885460 YP_002893832.1 CDS Tola_2652 NC_012691.1 2901703 2903172 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: son:SO_1009 NADH dehydrogenase subunit N; proton-translocating NADH-quinone oxidoreductase, chain N 2901703..2903172 Tolumonas auensis DSM 9187 7885461 YP_002893833.1 CDS Tola_2653 NC_012691.1 2903318 2903866 D PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA1849 GntR family transcriptional regulator; GntR family transcriptional regulator 2903318..2903866 Tolumonas auensis DSM 9187 7885462 YP_002893834.1 CDS Tola_2654 NC_012691.1 2904156 2905313 D PFAM: iron-containing alcohol dehydrogenase; KEGG: pin:Ping_2513 alcohol dehydrogenase, NAD(P)-dependent, iron-containing; iron-containing alcohol dehydrogenase 2904156..2905313 Tolumonas auensis DSM 9187 7885463 YP_002893835.1 CDS Tola_2655 NC_012691.1 2905425 2906753 R PFAM: glycoside hydrolase family 4; KEGG: kpn:KPN_04085 glycoside hydrolase family protein 4; maltose-6'-phosphate glucosidase complement(2905425..2906753) Tolumonas auensis DSM 9187 7885464 YP_002893836.1 CDS Tola_2656 NC_012691.1 2906821 2908404 R TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA1848 PTS system, alpha-glucoside-specific IIBC component; PTS system alpha-glucoside-specific transporter subunit IIBC complement(2906821..2908404) Tolumonas auensis DSM 9187 7885465 YP_002893837.1 CDS Tola_2657 NC_012691.1 2908715 2910211 R PFAM: Ppx/GppA phosphatase; KEGG: aha:AHA_0096 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Ppx/GppA phosphatase complement(2908715..2910211) Tolumonas auensis DSM 9187 7885466 YP_002893838.1 CDS Tola_2658 NC_012691.1 2910228 2911505 R enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB complement(2910228..2911505) Tolumonas auensis DSM 9187 7885467 YP_002893839.1 CDS Tola_2659 NC_012691.1 2911657 2911983 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: vvy:VV3182 thiol-disulfide isomerase and thioredoxin; thioredoxin 2911657..2911983 Tolumonas auensis DSM 9187 7885468 YP_002893840.1 CDS rho NC_012691.1 2912181 2913446 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2912181..2913446 Tolumonas auensis DSM 9187 7885469 YP_002893841.1 CDS Tola_2661 NC_012691.1 2913517 2915019 R PFAM: adenylate cyclase; KEGG: ppr:PBPRA0445 hypothetical protein; adenylate cyclase complement(2913517..2915019) Tolumonas auensis DSM 9187 7885470 YP_002893842.1 CDS Tola_2662 NC_012691.1 2915116 2915823 R KEGG: aha:AHA_3786 general secretion pathway protein B; general secretion pathway protein B complement(2915116..2915823) Tolumonas auensis DSM 9187 7885471 YP_002893843.1 CDS Tola_2663 NC_012691.1 2915823 2917451 R PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: asa:ASA_0515 general secretion pathway protein A; peptidoglycan-binding domain 1 protein complement(2915823..2917451) Tolumonas auensis DSM 9187 7885472 YP_002893844.1 CDS Tola_2664 NC_012691.1 2917553 2918785 D PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: asa:ASA_0516 multifunctional CCA protein; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 2917553..2918785 Tolumonas auensis DSM 9187 7885473 YP_002893845.1 CDS Tola_2665 NC_012691.1 2918790 2919278 R TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: aha:AHA_3848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2918790..2919278) Tolumonas auensis DSM 9187 7885474 YP_002893846.1 CDS Tola_2666 NC_012691.1 2919278 2919628 R TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: ppr:PBPRA0436 putative dihydroneopterin aldolase; dihydroneopterin aldolase complement(2919278..2919628) Tolumonas auensis DSM 9187 7885475 YP_002893847.1 CDS Tola_2667 NC_012691.1 2919734 2920345 D PFAM: protein of unknown function DUF205; KEGG: asa:ASA_0439 integral membrane protein; hypothetical protein 2919734..2920345 Tolumonas auensis DSM 9187 7885476 YP_002893848.1 CDS Tola_2668 NC_012691.1 2920325 2921344 R KEGG: aha:AHA_0831 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase complement(2920325..2921344) Tolumonas auensis DSM 9187 7885477 YP_002893849.1 CDS rpsU NC_012691.1 2921529 2921744 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2921529..2921744 Tolumonas auensis DSM 9187 7885478 YP_002893850.1 CDS Tola_2670 NC_012691.1 2921826 2923574 D KEGG: aha:AHA_0834 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase DnaG DnaB-binding; SMART: zinc finger CHC2-family protein; DNA primase DnaG DnaB-binding; Toprim sub domain protein; DNA primase 2921826..2923574 Tolumonas auensis DSM 9187 7885479 YP_002893851.1 CDS Tola_2671 NC_012691.1 2923811 2925664 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: aha:AHA_0835 RNA polymerase sigma factor RpoD; RNA polymerase sigma-70 subunit RpoD 2923811..2925664 Tolumonas auensis DSM 9187 7885480 YP_002893852.1 CDS Tola_2672 NC_012691.1 2926262 2926897 D hypothetical protein 2926262..2926897 Tolumonas auensis DSM 9187 7885482 YP_002893853.1 CDS Tola_2673 NC_012691.1 2927128 2927565 D KEGG: glo:Glov_0141 hypothetical protein; hypothetical protein 2927128..2927565 Tolumonas auensis DSM 9187 7885483 YP_002893854.1 CDS Tola_2674 NC_012691.1 2927593 2927721 D hypothetical protein 2927593..2927721 Tolumonas auensis DSM 9187 7885484 YP_002893855.1 CDS Tola_2675 NC_012691.1 2927705 2928226 R hypothetical protein complement(2927705..2928226) Tolumonas auensis DSM 9187 7885485 YP_002893856.1 CDS Tola_2676 NC_012691.1 2928748 2929116 R KEGG: spe:Spro_2664 hypothetical protein; hypothetical protein complement(2928748..2929116) Tolumonas auensis DSM 9187 7885486 YP_002893857.1 CDS Tola_2678 NC_012691.1 2930854 2933595 R PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: eta:ETA_24220 putative prophage primase; hypothetical protein complement(2930854..2933595) Tolumonas auensis DSM 9187 7885488 YP_002893858.1 CDS Tola_2679 NC_012691.1 2933592 2934305 R PFAM: AntA/AntB antirepressor domain protein; KEGG: eta:ETA_24290 putative phage anti-repressor protein; AntA/AntB antirepressor domain-containing protein complement(2933592..2934305) Tolumonas auensis DSM 9187 7885489 YP_002893859.1 CDS Tola_2680 NC_012691.1 2934315 2934491 R PFAM: Prophage CP4-57 regulatory; KEGG: ecw:EcE24377A_0279 prophage CP4-57 regulatory protein; phage transcriptional regulator, AlpA complement(2934315..2934491) Tolumonas auensis DSM 9187 7885490 YP_002893860.1 CDS Tola_2681 NC_012691.1 2934603 2934902 R hypothetical protein complement(2934603..2934902) Tolumonas auensis DSM 9187 7885491 YP_002893861.1 CDS Tola_2682 NC_012691.1 2935048 2936349 R PFAM: integrase family protein; KEGG: vha:VIBHAR_00841 integrase; integrase family protein complement(2935048..2936349) Tolumonas auensis DSM 9187 7885492 YP_002893862.1 CDS Tola_2683 NC_012691.1 2937074 2938615 D PFAM: Integrase catalytic region; KEGG: shn:Shewana3_1250 integrase catalytic subunit; integrase catalytic subunit 2937074..2938615 Tolumonas auensis DSM 9187 7885493 YP_002893863.1 CDS Tola_2684 NC_012691.1 2938627 2939382 D PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: asa:ASA_1464 transposase subunit 2; IstB domain-containing protein ATP-binding protein 2938627..2939382 Tolumonas auensis DSM 9187 7885494 YP_002893864.1 CDS Tola_2685 NC_012691.1 2945470 2945634 D KEGG: asa:ASA_1610 hypothetical protein; hypothetical protein 2945470..2945634 Tolumonas auensis DSM 9187 7885498 YP_002893865.1 CDS Tola_2686 NC_012691.1 2945704 2946444 R PFAM: MgtC/SapB transporter; KEGG: mag:amb2314 hypothetical protein; MgtC/SapB transporter complement(2945704..2946444) Tolumonas auensis DSM 9187 7885499 YP_002893866.1 CDS Tola_2687 NC_012691.1 2946730 2947923 R enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase complement(2946730..2947923) Tolumonas auensis DSM 9187 7885500 YP_002893867.1 CDS Tola_2688 NC_012691.1 2948104 2949558 D KEGG: aha:AHA_2624 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2948104..2949558 Tolumonas auensis DSM 9187 7885501 YP_002893868.1 CDS Tola_2689 NC_012691.1 2949731 2950945 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2949731..2950945 Tolumonas auensis DSM 9187 7885502 YP_002893869.1 CDS Tola_2690 NC_012691.1 2951027 2951644 D KEGG: asa:ASA_1886 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2951027..2951644 Tolumonas auensis DSM 9187 7885503 YP_002893870.1 CDS Tola_2691 NC_012691.1 2951641 2952195 R PFAM: nitroreductase; KEGG: aha:AHA_3356 nitroreductase family protein; nitroreductase complement(2951641..2952195) Tolumonas auensis DSM 9187 7885504 YP_002893871.1 CDS Tola_2692 NC_012691.1 2952351 2954201 D TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: aha:AHA_3358 signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type 2952351..2954201 Tolumonas auensis DSM 9187 7885505 YP_002893872.1 CDS ansA NC_012691.1 2954242 2955249 D converts asparagine to aspartate and ammonia; asparaginase 2954242..2955249 Tolumonas auensis DSM 9187 7885506 YP_002893873.1 CDS Tola_2694 NC_012691.1 2955309 2955692 R KEGG: aha:AHA_3614 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(2955309..2955692) Tolumonas auensis DSM 9187 7885507 YP_002893874.1 CDS Tola_2695 NC_012691.1 2955795 2957882 R KEGG: asa:ASA_0762 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(2955795..2957882) Tolumonas auensis DSM 9187 7885508 YP_002893875.1 CDS Tola_2696 NC_012691.1 2957936 2960119 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(2957936..2960119) Tolumonas auensis DSM 9187 7885509 YP_002893876.1 CDS malQ NC_012691.1 2960180 2962372 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(2960180..2962372) Tolumonas auensis DSM 9187 7885510 YP_002893877.1 CDS Tola_2698 NC_012691.1 2962675 2963685 D KEGG: vco:VC0395_A1586 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2962675..2963685 Tolumonas auensis DSM 9187 7885511 YP_002893878.1 CDS Tola_2699 NC_012691.1 2963757 2964641 D PFAM: Aldose 1-epimerase; KEGG: asa:ASA_0758 aldose 1-epimerase; aldose 1-epimerase 2963757..2964641 Tolumonas auensis DSM 9187 7885512 YP_002893879.1 CDS Tola_2700 NC_012691.1 2964714 2965775 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2964714..2965775) Tolumonas auensis DSM 9187 7885513 YP_002893880.1 CDS Tola_2701 NC_012691.1 2966863 2967651 R TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: aha:AHA_3636 TPR domain-containing protein; tol-pal system protein YbgF complement(2966863..2967651) Tolumonas auensis DSM 9187 7884710 YP_002893881.1 CDS Tola_2702 NC_012691.1 2967664 2968179 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: aha:AHA_3637 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(2967664..2968179) Tolumonas auensis DSM 9187 7884711 YP_002893882.1 CDS tolB NC_012691.1 2968207 2969502 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(2968207..2969502) Tolumonas auensis DSM 9187 7884712 YP_002893883.1 CDS Tola_2704 NC_012691.1 2969547 2970608 R TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: apa:APP7_0306 cell envelope integrity inner membrane protein TolA; protein TolA complement(2969547..2970608) Tolumonas auensis DSM 9187 7884713 YP_002893884.1 CDS Tola_2705 NC_012691.1 2970625 2971062 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slo:Shew_1525 biopolymer transport protein ExbD/TolR; protein TolR complement(2970625..2971062) Tolumonas auensis DSM 9187 7884714 YP_002893885.1 CDS Tola_2706 NC_012691.1 2971065 2971751 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: aha:AHA_3641 protein TolQ; protein TolQ complement(2971065..2971751) Tolumonas auensis DSM 9187 7884715 YP_002893886.1 CDS Tola_2707 NC_012691.1 2971738 2972151 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: asa:ASA_0741 Tol system-associated acyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(2971738..2972151) Tolumonas auensis DSM 9187 7884716 YP_002893887.1 CDS Tola_2708 NC_012691.1 2972286 2972399 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: aha:AHA_3644 cyd operon protein YbgT; cyd operon protein YbgT complement(2972286..2972399) Tolumonas auensis DSM 9187 7884717 YP_002893888.1 CDS Tola_2709 NC_012691.1 2972410 2973549 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: saz:Sama_2348 cytochrome bd-I oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II complement(2972410..2973549) Tolumonas auensis DSM 9187 7884718 YP_002893889.1 CDS Tola_2710 NC_012691.1 2973562 2975118 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: asa:ASA_0737 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(2973562..2975118) Tolumonas auensis DSM 9187 7884719 YP_002893890.1 CDS Tola_2711 NC_012691.1 2975554 2976567 R KEGG: asa:ASA_0736 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Holliday junction DNA helicase RuvB complement(2975554..2976567) Tolumonas auensis DSM 9187 7884720 YP_002893891.1 CDS Tola_2712 NC_012691.1 2976581 2977201 R KEGG: vpa:VP1051 Holliday junction DNA helicase motor protein; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA complement(2976581..2977201) Tolumonas auensis DSM 9187 7884721 YP_002893892.1 CDS Tola_2713 NC_012691.1 2977275 2977796 R KEGG: aha:AHA_1301 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC complement(2977275..2977796) Tolumonas auensis DSM 9187 7884722 YP_002893893.1 CDS Tola_2714 NC_012691.1 2977898 2978641 R PFAM: protein of unknown function DUF28; KEGG: asa:ASA_2843 hypothetical protein; hypothetical protein complement(2977898..2978641) Tolumonas auensis DSM 9187 7884723 YP_002893894.1 CDS Tola_2715 NC_012691.1 2978751 2980517 R TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: asa:ASA_2844 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase complement(2978751..2980517) Tolumonas auensis DSM 9187 7884724 YP_002893895.1 CDS Tola_2716 NC_012691.1 2980570 2980824 R TIGRFAM: regulatory protein, FmdB family; KEGG: pfo:Pfl01_4412 hypothetical protein; FmdB family regulatory protein complement(2980570..2980824) Tolumonas auensis DSM 9187 7884725 YP_002893896.1 CDS Tola_2717 NC_012691.1 2981032 2982462 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2981032..2982462 Tolumonas auensis DSM 9187 7884726 YP_002893897.1 CDS Tola_2718 NC_012691.1 2982515 2983561 D PFAM: PhoH family protein; KEGG: aha:AHA_3242 PhoH family protein; PhoH family protein 2982515..2983561 Tolumonas auensis DSM 9187 7884727 YP_002893898.1 CDS Tola_2719 NC_012691.1 2983558 2984025 D PFAM: protein of unknown function UPF0054; KEGG: asa:ASA_1072 hypothetical protein; hypothetical protein 2983558..2984025 Tolumonas auensis DSM 9187 7884728 YP_002893899.1 CDS Tola_2720 NC_012691.1 2984040 2984918 D PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: aha:AHA_3244 magnesium and cobalt efflux protein CorC; hypothetical protein 2984040..2984918 Tolumonas auensis DSM 9187 7884729 YP_002893900.1 CDS Tola_2721 NC_012691.1 2984905 2986458 D TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: asa:ASA_1070 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 2984905..2986458 Tolumonas auensis DSM 9187 7884730 YP_002893901.1 CDS Tola_2722 NC_012691.1 2986501 2987181 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: haloacid dehalogenase-like hydrolase family protein; HAD-superfamily hydrolase complement(2986501..2987181) Tolumonas auensis DSM 9187 7884731 YP_002893902.1 CDS Tola_2723 NC_012691.1 2987291 2987515 R KEGG: pha:PSHAa0191 hypothetical protein; hypothetical protein complement(2987291..2987515) Tolumonas auensis DSM 9187 7884732 YP_002893903.1 CDS Tola_2724 NC_012691.1 2987567 2988583 R TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: aha:AHA_3675 tRNA-dihydrouridine synthase A; yjbN family TIM-barrel protein complement(2987567..2988583) Tolumonas auensis DSM 9187 7884733 YP_002893904.1 CDS Tola_2725 NC_012691.1 2988801 2989043 D KEGG: asa:ASA_3638 hypothetical protein; hypothetical protein 2988801..2989043 Tolumonas auensis DSM 9187 7884734 YP_002893905.1 CDS Tola_2726 NC_012691.1 2989090 2990166 R KEGG: aha:AHA_1015 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(2989090..2990166) Tolumonas auensis DSM 9187 7884735 YP_002893906.1 CDS Tola_2727 NC_012691.1 2990176 2991570 R KEGG: aha:AHA_1012 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase complement(2990176..2991570) Tolumonas auensis DSM 9187 7884736 YP_002893907.1 CDS Tola_2728 NC_012691.1 2992324 2992518 R TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: ilo:IL1737 carbon storage regulatory protein; carbon storage regulator CsrA complement(2992324..2992518) Tolumonas auensis DSM 9187 7884742 YP_002893908.1 CDS alaS NC_012691.1 2992720 2995344 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2992720..2995344) Tolumonas auensis DSM 9187 7884743 YP_002893909.1 CDS Tola_2730 NC_012691.1 2995499 2995954 R PFAM: regulatory protein RecX; KEGG: hch:HCH_02189 hypothetical protein; regulatory protein RecX complement(2995499..2995954) Tolumonas auensis DSM 9187 7884744 YP_002893910.1 CDS recA NC_012691.1 2996004 2997086 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2996004..2997086) Tolumonas auensis DSM 9187 7884745 YP_002893911.1 CDS Tola_2732 NC_012691.1 2997160 2997645 R PFAM: CinA domain protein; KEGG: asa:ASA_3808 CinA-related protein; CinA domain-containing protein complement(2997160..2997645) Tolumonas auensis DSM 9187 7884746 YP_002893912.1 CDS Tola_2733 NC_012691.1 2997677 3000274 D KEGG: aha:AHA_3718 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 2997677..3000274 Tolumonas auensis DSM 9187 7884747 YP_002893913.1 CDS Tola_2734 NC_012691.1 3000330 3001304 R TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: aha:AHA_0830 RNA polymerase sigma factor RpoS; RpoD subfamily RNA polymerase sigma-70 subunit complement(3000330..3001304) Tolumonas auensis DSM 9187 7884748 YP_002893914.1 CDS Tola_2735 NC_012691.1 3001353 3002489 R PFAM: Peptidase M23; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: aha:AHA_0829 lipoprotein NlpD; peptidase M23 complement(3001353..3002489) Tolumonas auensis DSM 9187 7884749 YP_002893915.1 CDS Tola_2736 NC_012691.1 3002486 3003112 R KEGG: aha:AHA_0827 protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(3002486..3003112) Tolumonas auensis DSM 9187 7884750 YP_002893916.1 CDS surE NC_012691.1 3003114 3003860 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(3003114..3003860) Tolumonas auensis DSM 9187 7884751 YP_002893917.1 CDS Tola_2738 NC_012691.1 3003838 3004899 R PFAM: tRNA pseudouridine synthase D TruD; KEGG: aha:AHA_0825 tRNA pseudouridine synthase D; tRNA pseudouridine synthase D TruD complement(3003838..3004899) Tolumonas auensis DSM 9187 7884752 YP_002893918.1 CDS Tola_2739 NC_012691.1 3004892 3005374 R KEGG: asa:ASA_3472 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(3004892..3005374) Tolumonas auensis DSM 9187 7884753 YP_002893919.1 CDS Tola_2740 NC_012691.1 3005371 3006054 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ppr:PBPRA3077 putative 2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3005371..3006054) Tolumonas auensis DSM 9187 7884754 YP_002893920.1 CDS Tola_2741 NC_012691.1 3006058 3006375 R PFAM: Septum formation initiator; KEGG: asa:ASA_3474 cell division protein FtsB; septum formation initiator complement(3006058..3006375) Tolumonas auensis DSM 9187 7884755 YP_002893921.1 CDS eno NC_012691.1 3006473 3007774 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(3006473..3007774) Tolumonas auensis DSM 9187 7884756 YP_002893922.1 CDS pyrG NC_012691.1 3007863 3009500 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3007863..3009500) Tolumonas auensis DSM 9187 7884757 YP_002893923.1 CDS Tola_2744 NC_012691.1 3009642 3010439 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: aha:AHA_0819 MazG family protein; MazG family protein complement(3009642..3010439) Tolumonas auensis DSM 9187 7884758 YP_002893924.1 CDS Tola_2745 NC_012691.1 3010504 3012735 R KEGG: aha:AHA_0818 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA complement(3010504..3012735) Tolumonas auensis DSM 9187 7884759 YP_002893925.1 CDS rumA NC_012691.1 3012753 3014075 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(3012753..3014075) Tolumonas auensis DSM 9187 7884760 YP_002893926.1 CDS Tola_2747 NC_012691.1 3014172 3016898 D part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 3014172..3016898 Tolumonas auensis DSM 9187 7884761 YP_002893927.1 CDS Tola_2748 NC_012691.1 3016927 3018045 R PFAM: phospholipid/glycerol acyltransferase; KEGG: asa:ASA_3551 hypothetical protein; phospholipid/glycerol acyltransferase complement(3016927..3018045) Tolumonas auensis DSM 9187 7884762 YP_002893928.1 CDS Tola_2749 NC_012691.1 3018159 3018770 R KEGG: ppr:PBPRA0299 hypothetical protein; hypothetical protein complement(3018159..3018770) Tolumonas auensis DSM 9187 7884763 YP_002893929.1 CDS Tola_2750 NC_012691.1 3018895 3020283 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: aha:AHA_3592 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein; GntR family transcriptional regulator 3018895..3020283 Tolumonas auensis DSM 9187 7884764 YP_002893930.1 CDS Tola_2751 NC_012691.1 3020293 3020532 D PFAM: protein of unknown function UPF0270; KEGG: eca:ECA4061 hypothetical protein; hypothetical protein 3020293..3020532 Tolumonas auensis DSM 9187 7884765 YP_002893931.1 CDS Tola_2752 NC_012691.1 3020801 3021439 D complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 3020801..3021439 Tolumonas auensis DSM 9187 7884766 YP_002893932.1 CDS Tola_2753 NC_012691.1 3021543 3022760 R TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: asa:ASA_1134 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; succinylornithine transaminase family complement(3021543..3022760) Tolumonas auensis DSM 9187 7884767 YP_002893933.1 CDS Tola_2754 NC_012691.1 3022858 3023436 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: eta:ETA_31930 para-aminobenzoate synthase glutamine amidotransferase component II; glutamine amidotransferase of anthranilate synthase complement(3022858..3023436) Tolumonas auensis DSM 9187 7884768 YP_002893934.1 CDS Tola_2755 NC_012691.1 3023450 3023929 R PFAM: SEC-C motif domain protein; KEGG: gsu:GSU1048 SecC motif-containing protein; SEC-C motif domain-containing protein complement(3023450..3023929) Tolumonas auensis DSM 9187 7884769 YP_002893935.1 CDS Tola_2756 NC_012691.1 3024081 3024821 D PFAM: metallophosphoesterase; KEGG: esa:ESA_01411 hypothetical protein; metallophosphoesterase 3024081..3024821 Tolumonas auensis DSM 9187 7884770 YP_002893936.1 CDS Tola_2757 NC_012691.1 3024839 3026164 R PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: aha:AHA_0416 major facilitator transporter; major facilitator superfamily protein complement(3024839..3026164) Tolumonas auensis DSM 9187 7884771 YP_002893937.1 CDS Tola_2758 NC_012691.1 3026444 3026929 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 3026444..3026929 Tolumonas auensis DSM 9187 7884772 YP_002893938.1 CDS Tola_2759 NC_012691.1 3026973 3027182 R PFAM: protein of unknown function DUF904; KEGG: aha:AHA_0194 transcriptional regulator; hypothetical protein complement(3026973..3027182) Tolumonas auensis DSM 9187 7884773 YP_002893939.1 CDS Tola_2760 NC_012691.1 3027295 3028572 R KEGG: aha:AHA_0193 hypothetical protein; hypothetical protein complement(3027295..3028572) Tolumonas auensis DSM 9187 7884774 YP_002893940.1 CDS cysE NC_012691.1 3028610 3029401 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(3028610..3029401) Tolumonas auensis DSM 9187 7884775 YP_002893941.1 CDS Tola_2762 NC_012691.1 3029424 3030332 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: aha:AHA_0191 cation-efflux pump FieF; cation diffusion facilitator family transporter complement(3029424..3030332) Tolumonas auensis DSM 9187 7884776 YP_002893942.1 CDS Tola_2763 NC_012691.1 3030473 3031321 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1487 putrescine ABC transporter membrane protein; binding-protein-dependent transport system inner membrane protein complement(3030473..3031321) Tolumonas auensis DSM 9187 7884777 YP_002893943.1 CDS Tola_2764 NC_012691.1 3031318 3032244 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2675 putrescine ABC transporter membrane protein; putrescine ABC transporter membrane protein complement(3031318..3032244) Tolumonas auensis DSM 9187 7884778 YP_002893944.1 CDS potG NC_012691.1 3032241 3033374 R part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein complement(3032241..3033374) Tolumonas auensis DSM 9187 7884779 YP_002893945.1 CDS Tola_2766 NC_012691.1 3033437 3034537 R PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2677 putrescine ABC transporter periplasmic substrate-binding protein; extracellular solute-binding protein complement(3033437..3034537) Tolumonas auensis DSM 9187 7884780 YP_002893946.1 CDS Tola_2767 NC_012691.1 3034831 3035316 D PFAM: CreA family protein; KEGG: asa:ASA_0169 CreA; CreA family protein 3034831..3035316 Tolumonas auensis DSM 9187 7884781 YP_002893947.1 CDS Tola_2768 NC_012691.1 3035444 3035977 D KEGG: sse:Ssed_0675 hypothetical protein; hypothetical protein 3035444..3035977 Tolumonas auensis DSM 9187 7884782 YP_002893948.1 CDS Tola_2769 NC_012691.1 3041642 3044218 R KEGG: aha:AHA_4071 ATP-dependent chaperone protein ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(3041642..3044218) Tolumonas auensis DSM 9187 7885601 YP_002893949.1 CDS Tola_2770 NC_012691.1 3044316 3045053 R PFAM: protein of unknown function DUF152; KEGG: aha:AHA_4072 hypothetical protein; hypothetical protein complement(3044316..3045053) Tolumonas auensis DSM 9187 7885602 YP_002893950.1 CDS Tola_2771 NC_012691.1 3045044 3046024 R KEGG: asa:ASA_0244 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(3045044..3046024) Tolumonas auensis DSM 9187 7885603 YP_002893951.1 CDS Tola_2772 NC_012691.1 3046140 3046901 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: asa:ASA_0243 ComL family lipoprotein; outer membrane assembly lipoprotein YfiO 3046140..3046901 Tolumonas auensis DSM 9187 7885604 YP_002893952.1 CDS mgsA NC_012691.1 3046989 3047450 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(3046989..3047450) Tolumonas auensis DSM 9187 7885605 YP_002893953.1 CDS Tola_2774 NC_012691.1 3047569 3048753 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3047569..3048753) Tolumonas auensis DSM 9187 7885606 YP_002893954.1 CDS Tola_2775 NC_012691.1 3048819 3050921 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3048819..3050921) Tolumonas auensis DSM 9187 7885607 YP_002893955.1 CDS Tola_2776 NC_012691.1 3051003 3051473 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3051003..3051473) Tolumonas auensis DSM 9187 7885608 YP_002893956.1 CDS Tola_2777 NC_012691.1 3051557 3051931 R TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: hsm:HSM_1809 ribosomal protein S12; 30S ribosomal protein S12 complement(3051557..3051931) Tolumonas auensis DSM 9187 7885609 YP_002893957.1 CDS Tola_2778 NC_012691.1 3052115 3052387 R TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: aha:AHA_4022 hypothetical protein; sulfur relay protein TusB/DsrH complement(3052115..3052387) Tolumonas auensis DSM 9187 7885610 YP_002893958.1 CDS Tola_2779 NC_012691.1 3052395 3052751 R TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; KEGG: pmr:PMI2797 intracellular sulfur oxidation protein; sulfur relay protein TusC/DsrF complement(3052395..3052751) Tolumonas auensis DSM 9187 7885611 YP_002893959.1 CDS Tola_2780 NC_012691.1 3052759 3053151 R TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; KEGG: asa:ASA_0287 intracellular sulfur oxidation protein DsrE; sulfur relay protein TusD/DsrE complement(3052759..3053151) Tolumonas auensis DSM 9187 7885612 YP_002893960.1 CDS Tola_2781 NC_012691.1 3053153 3053539 R TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: asa:ASA_0286 putative translation initiation inhibitor; endoribonuclease L-PSP complement(3053153..3053539) Tolumonas auensis DSM 9187 7885613 YP_002893961.1 CDS Tola_2782 NC_012691.1 3053665 3057969 R KEGG: aha:AHA_4027 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(3053665..3057969) Tolumonas auensis DSM 9187 7885614 YP_002893962.1 CDS rpoB NC_012691.1 3058057 3062085 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3058057..3062085) Tolumonas auensis DSM 9187 7885615 YP_002893963.1 CDS Tola_2784 NC_012691.1 3062293 3062658 R TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: aha:AHA_4029 ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(3062293..3062658) Tolumonas auensis DSM 9187 7885616 YP_002893964.1 CDS rplJ NC_012691.1 3062719 3063222 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3062719..3063222) Tolumonas auensis DSM 9187 7885617 YP_002893965.1 CDS Tola_2786 NC_012691.1 3063455 3064159 R TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: eta:ETA_01520 50S ribosomal protein L1; 50S ribosomal protein L1 complement(3063455..3064159) Tolumonas auensis DSM 9187 7885618 YP_002893966.1 CDS rplK NC_012691.1 3064164 3064592 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3064164..3064592) Tolumonas auensis DSM 9187 7885619 YP_002893967.1 CDS Tola_2788 NC_012691.1 3064713 3065255 R KEGG: aha:AHA_4033 transcription termination/antitermination factor NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor complement(3064713..3065255) Tolumonas auensis DSM 9187 7885620 YP_002893968.1 CDS Tola_2789 NC_012691.1 3065259 3065642 R TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: asa:ASA_0277 preprotein translocase subunit SecE; Preprotein translocase subunit SecE complement(3065259..3065642) Tolumonas auensis DSM 9187 7885621 YP_002893969.1 CDS Tola_2790 NC_012691.1 3065827 3067011 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3065827..3067011) Tolumonas auensis DSM 9187 7885623 YP_002893970.1 CDS Tola_2791 NC_012691.1 3067513 3068460 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 3067513..3068460 Tolumonas auensis DSM 9187 7885626 YP_002893971.1 CDS Tola_2792 NC_012691.1 3068463 3069428 R KEGG: aha:AHA_4040 BirA bifunctional protein; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase complement(3068463..3069428) Tolumonas auensis DSM 9187 7885627 YP_002893972.1 CDS Tola_2793 NC_012691.1 3069425 3070465 R KEGG: asa:ASA_0270 UDP-N-acetylpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3069425..3070465) Tolumonas auensis DSM 9187 7885628 YP_002893973.1 CDS Tola_2794 NC_012691.1 3070528 3071901 R KEGG: aha:AHA_0665 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(3070528..3071901) Tolumonas auensis DSM 9187 7885629 YP_002893974.1 CDS Tola_2795 NC_012691.1 3072107 3072892 D PFAM: cytochrome c assembly protein; KEGG: asa:ASA_0664 ABC-type transporter, permease component; cytochrome c assembly protein 3072107..3072892 Tolumonas auensis DSM 9187 7885630 YP_002893975.1 CDS pntB NC_012691.1 3072976 3074472 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(3072976..3074472) Tolumonas auensis DSM 9187 7885631 YP_002893976.1 CDS pntA NC_012691.1 3074484 3076016 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(3074484..3076016) Tolumonas auensis DSM 9187 7885632 YP_002893977.1 CDS Tola_2798 NC_012691.1 3076355 3077260 R PFAM: Peptidase M23; KEGG: pmy:Pmen_0185 peptidase M23B; peptidase M23 complement(3076355..3077260) Tolumonas auensis DSM 9187 7885633 YP_002893978.1 CDS Tola_2799 NC_012691.1 3077281 3077727 R KEGG: pmu:PM0960 ribosomal-protein-alanine N-acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(3077281..3077727) Tolumonas auensis DSM 9187 7885634 YP_002893979.1 CDS Tola_2800 NC_012691.1 3077717 3078070 R hypothetical protein complement(3077717..3078070) Tolumonas auensis DSM 9187 7885635 YP_002893980.1 CDS Tola_2801 NC_012691.1 3078256 3079896 D PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: yen:YE0006 regulatory ATPase RavA; ATPase 3078256..3079896 Tolumonas auensis DSM 9187 7885636 YP_002893981.1 CDS yieM NC_012691.1 3079900 3081339 D contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 3079900..3081339 Tolumonas auensis DSM 9187 7885637 YP_002893982.1 CDS pyrB NC_012691.1 3081867 3082790 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3081867..3082790 Tolumonas auensis DSM 9187 7885639 YP_002893983.1 CDS Tola_2804 NC_012691.1 3082801 3083265 D involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 3082801..3083265 Tolumonas auensis DSM 9187 7885640 YP_002893984.1 CDS Tola_2805 NC_012691.1 3083418 3084560 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dde:Dde_0668 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 3083418..3084560 Tolumonas auensis DSM 9187 7885641 YP_002893985.1 CDS Tola_2806 NC_012691.1 3084578 3085771 D TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; KEGG: esa:ESA_02786 putative cation:proton antiport protein; potassium efflux system protein 3084578..3085771 Tolumonas auensis DSM 9187 7885642 YP_002893986.1 CDS Tola_2807 NC_012691.1 3085910 3086422 D PFAM: 17 kDa surface antigen; KEGG: sek:SSPA0337 putative outer membrane lipoprotein; 17 kDa surface antigen 3085910..3086422 Tolumonas auensis DSM 9187 7885643 YP_002893987.1 CDS Tola_2808 NC_012691.1 3086437 3086985 D KEGG: stt:t0350 hypothetical protein; hypothetical protein 3086437..3086985 Tolumonas auensis DSM 9187 7885644 YP_002893988.1 CDS Tola_2809 NC_012691.1 3087034 3087483 R PFAM: protein of unknown function DUF188; KEGG: saz:Sama_3557 hypothetical protein; hypothetical protein complement(3087034..3087483) Tolumonas auensis DSM 9187 7885645 YP_002893989.1 CDS Tola_2810 NC_012691.1 3087497 3089353 R PFAM: peptidase U32; KEGG: aha:AHA_1043 U32 family peptidase; peptidase U32 complement(3087497..3089353) Tolumonas auensis DSM 9187 7885646 YP_002893990.1 CDS Tola_2811 NC_012691.1 3089430 3091979 R KEGG: pae:PA1181 putative sensor protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; MASE1 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(3089430..3091979) Tolumonas auensis DSM 9187 7885647 YP_002893991.1 CDS Tola_2812 NC_012691.1 3092125 3092628 R KEGG: eba:ebA4070 T/U mismatch-specific DNA glycosylase; T/U mismatch-specific DNA glycosylase complement(3092125..3092628) Tolumonas auensis DSM 9187 7885648 YP_002893992.1 CDS groEL NC_012691.1 3092700 3094337 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3092700..3094337) Tolumonas auensis DSM 9187 7885649 YP_002893993.1 CDS groES NC_012691.1 3094378 3094671 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3094378..3094671) Tolumonas auensis DSM 9187 7885650 YP_002893994.1 CDS Tola_2815 NC_012691.1 3094811 3095323 R PFAM: FxsA cytoplasmic membrane protein; KEGG: aha:AHA_0857 protein FxsA; FxsA cytoplasmic membrane protein complement(3094811..3095323) Tolumonas auensis DSM 9187 7885651 YP_002893995.1 CDS Tola_2816 NC_012691.1 3095499 3095819 D PFAM: CutA1 divalent ion tolerance protein; KEGG: asa:ASA_3500 divalent cation tolerance protein CutA; CutA1 divalent ion tolerance protein 3095499..3095819 Tolumonas auensis DSM 9187 7885652 YP_002893996.1 CDS Tola_2817 NC_012691.1 3095816 3097546 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sek:SSPA3843 thiol:disulfide interchange protein DsbD; cytochrome c biogenesis protein transmembrane region 3095816..3097546 Tolumonas auensis DSM 9187 7885653 YP_002893997.1 CDS Tola_2818 NC_012691.1 3097522 3097818 D PFAM: Excinuclease ABC C subunit domain protein; KEGG: spe:Spro_0507 excinuclease ABC subunit C; excinuclease ABC subunit C 3097522..3097818 Tolumonas auensis DSM 9187 7885654 YP_002893998.1 CDS Tola_2819 NC_012691.1 3097921 3099270 D PFAM: sodium:neurotransmitter symporter; KEGG: rfr:Rfer_2107 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 3097921..3099270 Tolumonas auensis DSM 9187 7885655 YP_002893999.1 CDS Tola_2820 NC_012691.1 3099437 3099820 D hypothetical protein 3099437..3099820 Tolumonas auensis DSM 9187 7885656 YP_002894000.1 CDS Tola_2821 NC_012691.1 3099935 3101176 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: cvi:CV_3153 D-alanyl-D-alanine-endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 3099935..3101176 Tolumonas auensis DSM 9187 7885657 YP_002894001.1 CDS Tola_2822 NC_012691.1 3101239 3101739 R PFAM: protein of unknown function DUF1451; KEGG: asa:ASA_1069 hypothetical protein; hypothetical protein complement(3101239..3101739) Tolumonas auensis DSM 9187 7885658 YP_002894002.1 CDS leuS NC_012691.1 3101896 3104481 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3101896..3104481 Tolumonas auensis DSM 9187 7885659 YP_002894003.1 CDS Tola_2824 NC_012691.1 3104485 3104976 D PFAM: Rare lipoprotein B; KEGG: aha:AHA_3248 rare lipoprotein B; Rare lipoprotein B 3104485..3104976 Tolumonas auensis DSM 9187 7885660 YP_002894004.1 CDS Tola_2825 NC_012691.1 3104976 3106013 D KEGG: aha:AHA_3250 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 3104976..3106013 Tolumonas auensis DSM 9187 7885661 YP_002894005.1 CDS Tola_2826 NC_012691.1 3106083 3106418 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: esa:ESA_02690 hypothetical protein; iojap family protein 3106083..3106418 Tolumonas auensis DSM 9187 7885662 YP_002894006.1 CDS Tola_2827 NC_012691.1 3106422 3106892 D PFAM: protein of unknown function DUF163; KEGG: eca:ECA1304 SPOUT methyltransferase superfamily protein; hypothetical protein 3106422..3106892 Tolumonas auensis DSM 9187 7885663 YP_002894007.1 CDS Tola_2828 NC_012691.1 3106896 3108782 D KEGG: aha:AHA_3254 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3106896..3108782 Tolumonas auensis DSM 9187 7885664 YP_002894008.1 CDS Tola_2829 NC_012691.1 3108779 3109882 D TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: asa:ASA_1061 cell division membrane protein; rod shape-determining protein RodA 3108779..3109882 Tolumonas auensis DSM 9187 7885665 YP_002894009.1 CDS Tola_2830 NC_012691.1 3109894 3110865 D TIGRFAM: lytic murein transglycosylase B; KEGG: aha:AHA_3257 lytic murein transglycosylase B; lytic murein transglycosylase B 3109894..3110865 Tolumonas auensis DSM 9187 7885666 YP_002894010.1 CDS Tola_2831 NC_012691.1 3110855 3111625 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: shn:Shewana3_0992 rare lipoprotein A; rare lipoprotein A 3110855..3111625 Tolumonas auensis DSM 9187 7885667 YP_002894011.1 CDS Tola_2832 NC_012691.1 3111652 3112308 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: vfi:VF_0746 minor lipoprotein; rare lipoprotein A 3111652..3112308 Tolumonas auensis DSM 9187 7885668 YP_002894012.1 CDS Tola_2833 NC_012691.1 3112455 3113696 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: aha:AHA_3259 penicillin-binding protein; Beta-lactamase 3112455..3113696 Tolumonas auensis DSM 9187 7885669 YP_002894013.1 CDS Tola_2834 NC_012691.1 3113776 3114045 D PFAM: protein of unknown function DUF493; KEGG: aha:AHA_3260 hypothetical protein; hypothetical protein 3113776..3114045 Tolumonas auensis DSM 9187 7885670 YP_002894014.1 CDS Tola_2835 NC_012691.1 3114142 3114819 D KEGG: spc:Sputcn32_2875 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3114142..3114819 Tolumonas auensis DSM 9187 7885671 YP_002894015.1 CDS Tola_2836 NC_012691.1 3114812 3115777 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3114812..3115777 Tolumonas auensis DSM 9187 7885672 YP_002894016.1 CDS Tola_2837 NC_012691.1 3115895 3116578 D PFAM: protein of unknown function DUF218; KEGG: asa:ASA_3722 SanA protein; hypothetical protein 3115895..3116578 Tolumonas auensis DSM 9187 7885673 YP_002894017.1 CDS Tola_2838 NC_012691.1 3116637 3118202 D Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 3116637..3118202 Tolumonas auensis DSM 9187 7885674 YP_002894018.1 CDS Tola_2839 NC_012691.1 3118366 3121158 D KEGG: dvl:Dvul_2249 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3118366..3121158 Tolumonas auensis DSM 9187 7885675 YP_002894019.1 CDS Tola_2840 NC_012691.1 3121389 3123536 R PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: swp:swp_1596 hypothetical protein; hypothetical protein complement(3121389..3123536) Tolumonas auensis DSM 9187 7884540 YP_002894020.1 CDS Tola_2841 NC_012691.1 3123617 3124438 R KEGG: vvu:VV2_0388 hypothetical protein; hypothetical protein complement(3123617..3124438) Tolumonas auensis DSM 9187 7884541 YP_002894021.1 CDS Tola_2842 NC_012691.1 3124573 3125739 R KEGG: vha:VIBHAR_00706 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; nucleotide sugar dehydrogenase complement(3124573..3125739) Tolumonas auensis DSM 9187 7884542 YP_002894022.1 CDS Tola_2844 NC_012691.1 3125994 3126257 R TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; plasmid stabilization system; KEGG: eba:ebD102 hypothetical protein; Txe/YoeB family addiction module toxin complement(3125994..3126257) Tolumonas auensis DSM 9187 7884544 YP_002894023.1 CDS Tola_2845 NC_012691.1 3126254 3126496 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: tmz:Tmz1t_0044 prevent-host-death family protein; prevent-host-death family protein complement(3126254..3126496) Tolumonas auensis DSM 9187 7884545 YP_002894024.1 CDS Tola_2846 NC_012691.1 3126599 3126901 R PFAM: plasmid stabilization system; KEGG: vha:VIBHAR_02600 hypothetical protein; plasmid stabilization system complement(3126599..3126901) Tolumonas auensis DSM 9187 7884546 YP_002894025.1 CDS Tola_2847 NC_012691.1 3126889 3127146 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: vvu:VV1_2432 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein complement(3126889..3127146) Tolumonas auensis DSM 9187 7884547 YP_002894026.1 CDS Tola_2848 NC_012691.1 3127282 3127815 R PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_II0540 hypothetical protein, putative phage gene; N-acetyltransferase GCN5 complement(3127282..3127815) Tolumonas auensis DSM 9187 7884548 YP_002894027.1 CDS Tola_2849 NC_012691.1 3127812 3128081 R PFAM: Protein of unknown function DUF1778; KEGG: vco:VC0395_0760 hypothetical protein; hypothetical protein complement(3127812..3128081) Tolumonas auensis DSM 9187 7884549 YP_002894028.1 CDS Tola_2850 NC_012691.1 3128333 3128581 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: ppr:PBPRB1200 hypothetical protein; prevent-host-death family protein 3128333..3128581 Tolumonas auensis DSM 9187 7884550 YP_002894029.1 CDS Tola_2851 NC_012691.1 3128571 3128861 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: vsa:VSAL_I1469 putative plasmid stabilisation system protein; RelE/StbE family addiction module toxin 3128571..3128861 Tolumonas auensis DSM 9187 7884551 YP_002894030.1 CDS Tola_2852 NC_012691.1 3129086 3129304 R hypothetical protein complement(3129086..3129304) Tolumonas auensis DSM 9187 7884552 YP_002894031.1 CDS Tola_2853 NC_012691.1 3129451 3129915 R KEGG: pca:Pcar_0790 hypothetical protein; hypothetical protein complement(3129451..3129915) Tolumonas auensis DSM 9187 7884553 YP_002894032.1 CDS Tola_2854 NC_012691.1 3129919 3130323 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: glo:Glov_3491 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(3129919..3130323) Tolumonas auensis DSM 9187 7884554 YP_002894033.1 CDS Tola_2855 NC_012691.1 3131020 3132357 R KEGG: pmr:PMI3414 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucosamine mutase complement(3131020..3132357) Tolumonas auensis DSM 9187 7884555 YP_002894034.1 CDS Tola_2856 NC_012691.1 3132441 3133445 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: shm:Shewmr7_3979 UDP-glucuronate 5'-epimerase; NAD-dependent epimerase/dehydratase complement(3132441..3133445) Tolumonas auensis DSM 9187 7884556 YP_002894035.1 CDS Tola_2857 NC_012691.1 3133526 3133918 R PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: shn:Shewana3_1381 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(3133526..3133918) Tolumonas auensis DSM 9187 7884557 YP_002894036.1 CDS Tola_2858 NC_012691.1 3134197 3135066 R KEGG: bca:BCE_5388 hypothetical protein; hypothetical protein complement(3134197..3135066) Tolumonas auensis DSM 9187 7884558 YP_002894037.1 CDS Tola_2859 NC_012691.1 3135082 3136161 R KEGG: swd:Swoo_3259 hypothetical protein; putative capsule formation protein complement(3135082..3136161) Tolumonas auensis DSM 9187 7884559 YP_002894038.1 CDS Tola_2860 NC_012691.1 3136222 3137103 R PFAM: glycosyl transferase family 2; KEGG: ecl:EcolC_1610 glycosyl transferase family protein; family 2 glycosyl transferase complement(3136222..3137103) Tolumonas auensis DSM 9187 7884560 YP_002894039.1 CDS Tola_2861 NC_012691.1 3137128 3137997 R KEGG: rpi:Rpic_0629 rhamnosyltransferase; rhamnosyltransferase complement(3137128..3137997) Tolumonas auensis DSM 9187 7884561 YP_002894040.1 CDS Tola_2862 NC_012691.1 3138360 3139457 R PFAM: glycosyl transferase group 1; KEGG: pmr:PMI3190 glycosyl transferase; group 1 glycosyl transferase complement(3138360..3139457) Tolumonas auensis DSM 9187 7884562 YP_002894041.1 CDS Tola_2863 NC_012691.1 3139723 3140946 R KEGG: reu:Reut_B5348 hypothetical protein; hypothetical protein complement(3139723..3140946) Tolumonas auensis DSM 9187 7884563 YP_002894042.1 CDS Tola_2864 NC_012691.1 3140943 3142214 R PFAM: polysaccharide biosynthesis protein; KEGG: reu:Reut_B5347 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3140943..3142214) Tolumonas auensis DSM 9187 7884564 YP_002894043.1 CDS Tola_2865 NC_012691.1 3142713 3143768 R TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: sfr:Sfri_2824 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(3142713..3143768) Tolumonas auensis DSM 9187 7884565 YP_002894044.1 CDS Tola_2866 NC_012691.1 3143848 3146007 R KEGG: aha:AHA_2877 tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein complement(3143848..3146007) Tolumonas auensis DSM 9187 7884566 YP_002894045.1 CDS Tola_2867 NC_012691.1 3146024 3146461 R PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eca:ECA1418 protein-tyrosine-phosphatase; protein tyrosine phosphatase complement(3146024..3146461) Tolumonas auensis DSM 9187 7884567 YP_002894046.1 CDS Tola_2868 NC_012691.1 3146464 3147711 R PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein complement(3146464..3147711) Tolumonas auensis DSM 9187 7884568 YP_002894047.1 CDS Tola_2869 NC_012691.1 3148087 3148308 D KEGG: mmw:Mmwyl1_1398 hypothetical protein; hypothetical protein 3148087..3148308 Tolumonas auensis DSM 9187 7884569 YP_002894048.1 CDS Tola_2870 NC_012691.1 3148301 3148591 D TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: pca:Pcar_0528 hypothetical protein; RelE/StbE family addiction module toxin 3148301..3148591 Tolumonas auensis DSM 9187 7884570 YP_002894049.1 CDS Tola_2871 NC_012691.1 3148710 3149516 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ppg:PputGB1_1444 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 3148710..3149516 Tolumonas auensis DSM 9187 7884571 YP_002894050.1 CDS Tola_2872 NC_012691.1 3149589 3149834 D PFAM: Post-segregation antitoxin CcdA; KEGG: vfm:VFMJ11_A0650 CcdB antidote CcdA; Post-segregation antitoxin CcdA 3149589..3149834 Tolumonas auensis DSM 9187 7884572 YP_002894051.1 CDS Tola_2873 NC_012691.1 3149834 3150151 D PFAM: CcdB protein; KEGG: vfm:VFMJ11_A0651 CcdB; CcdB protein 3149834..3150151 Tolumonas auensis DSM 9187 7884573 YP_002894052.1 CDS Tola_2875 NC_012691.1 3150405 3151244 R KEGG: slo:Shew_1541 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase complement(3150405..3151244) Tolumonas auensis DSM 9187 7884575 YP_002894053.1 CDS Tola_2876 NC_012691.1 3151254 3152378 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(3151254..3152378) Tolumonas auensis DSM 9187 7884576 YP_002894054.1 CDS Tola_2877 NC_012691.1 3152615 3153493 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: maq:Maqu_2250 LysR family transcriptional regulator; LysR family transcriptional regulator 3152615..3153493 Tolumonas auensis DSM 9187 7884577 YP_002894055.1 CDS Tola_2878 NC_012691.1 3153626 3154081 D SMART: helix-turn-helix domain protein; KEGG: sbl:Sbal_1261 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 3153626..3154081 Tolumonas auensis DSM 9187 7884578 YP_002894056.1 CDS Tola_2879 NC_012691.1 3154377 3154973 D KEGG: saz:Sama_3586 membrane protein; membrane protein 3154377..3154973 Tolumonas auensis DSM 9187 7884579 YP_002894057.1 CDS Tola_2880 NC_012691.1 3155025 3155234 R KEGG: eca:ECA2804 hypothetical protein; hypothetical protein complement(3155025..3155234) Tolumonas auensis DSM 9187 7884580 YP_002894058.1 CDS Tola_2881 NC_012691.1 3155325 3155708 R PFAM: protein of unknown function DUF423; KEGG: vch:VC0897 hypothetical protein; hypothetical protein complement(3155325..3155708) Tolumonas auensis DSM 9187 7884581 YP_002894059.1 CDS Tola_2882 NC_012691.1 3155844 3157265 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(3155844..3157265) Tolumonas auensis DSM 9187 7884582 YP_002894060.1 CDS Tola_2883 NC_012691.1 3157290 3158765 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vvu:VV2_1069 mannitol-1-phosphate/altronate dehydrogenase; Mannitol dehydrogenase domain-containing protein complement(3157290..3158765) Tolumonas auensis DSM 9187 7884583 YP_002894061.1 CDS Tola_2884 NC_012691.1 3158890 3160071 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(3158890..3160071) Tolumonas auensis DSM 9187 7884584 YP_002894062.1 CDS Tola_2885 NC_012691.1 3160357 3161658 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1967 putative hexuronate transporter; major facilitator superfamily protein 3160357..3161658 Tolumonas auensis DSM 9187 7884585 YP_002894063.1 CDS Tola_2886 NC_012691.1 3161688 3164054 D PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 putative glycosyl hydrolase; glucan 1,3-beta-glucosidase 3161688..3164054 Tolumonas auensis DSM 9187 7884586 YP_002894064.1 CDS Tola_2887 NC_012691.1 3164147 3164884 D PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: vpa:VPA1701 putative transcriptional regulatory protein; GntR family transcriptional regulator 3164147..3164884 Tolumonas auensis DSM 9187 7884587 YP_002894065.1 CDS Tola_2890 NC_012691.1 3167740 3169029 R PFAM: outer membrane porin; KEGG: ecc:c2007 putative outer membrane porin protein; putative outer membrane porin protein complement(3167740..3169029) Tolumonas auensis DSM 9187 7884590 YP_002894066.1 CDS Tola_2891 NC_012691.1 3169722 3171143 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: ect:ECIAI39_1442 glucuronide transporter; glucuronide transporter 3169722..3171143 Tolumonas auensis DSM 9187 7884591 YP_002894067.1 CDS Tola_2892 NC_012691.1 3171329 3171694 D hypothetical protein 3171329..3171694 Tolumonas auensis DSM 9187 7884592 YP_002894068.1 CDS Tola_2893 NC_012691.1 3171768 3172496 D KEGG: ppw:PputW619_5164 hypothetical protein; hypothetical protein 3171768..3172496 Tolumonas auensis DSM 9187 7884593 YP_002894069.1 CDS Tola_2894 NC_012691.1 3172509 3173162 D KEGG: pmy:Pmen_2239 hypothetical protein; hypothetical protein 3172509..3173162 Tolumonas auensis DSM 9187 7884594 YP_002894070.1 CDS Tola_2895 NC_012691.1 3173230 3174585 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A3314 glucuronide carrier protein; glucuronide transporter complement(3173230..3174585) Tolumonas auensis DSM 9187 7884595 YP_002894071.1 CDS Tola_2896 NC_012691.1 3174588 3176402 R PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: eum:ECUMN_1906 beta-D-glucuronidase; beta-D-glucuronidase complement(3174588..3176402) Tolumonas auensis DSM 9187 7884596 YP_002894072.1 CDS Tola_2897 NC_012691.1 3176558 3177484 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A3313 LysR family transcriptional regulator; LysR family transcriptional regulator 3176558..3177484 Tolumonas auensis DSM 9187 7884597 YP_002894073.1 CDS Tola_2898 NC_012691.1 3177543 3179345 R TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: tgr:Tgr7_3090 allophanate hydrolase; allophanate hydrolase complement(3177543..3179345) Tolumonas auensis DSM 9187 7884598 YP_002894074.1 CDS Tola_2899 NC_012691.1 3179348 3182950 R KEGG: cja:CJA_2723 UreA amidolyase homolog; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase complement(3179348..3182950) Tolumonas auensis DSM 9187 7884599 YP_002894075.1 CDS Tola_2900 NC_012691.1 3183065 3183703 R TIGRFAM: urea carboxylase-associated protein 1; KEGG: abo:ABO_1891 hypothetical protein; urea carboxylase-associated protein 1 complement(3183065..3183703) Tolumonas auensis DSM 9187 7884600 YP_002894076.1 CDS Tola_2901 NC_012691.1 3183714 3184436 R TIGRFAM: urea carboxylase-associated protein 2; KEGG: gbe:GbCGDNIH1_1747 hypothetical cytosolic protein; urea carboxylase-associated protein 2 complement(3183714..3184436) Tolumonas auensis DSM 9187 7884601 YP_002894077.1 CDS Tola_2902 NC_012691.1 3184438 3185241 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cja:CJA_2720 ABC transporter, ATP-binding protein; ABC transporter complement(3184438..3185241) Tolumonas auensis DSM 9187 7884602 YP_002894078.1 CDS Tola_2903 NC_012691.1 3185238 3186068 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cja:CJA_2719 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(3185238..3186068) Tolumonas auensis DSM 9187 7884603 YP_002894079.1 CDS Tola_2904 NC_012691.1 3186093 3187169 R TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: abo:ABO_1887 sulfonate ABC transporter periplasmic-binding protein; ABC transporter substrate-binding protein complement(3186093..3187169) Tolumonas auensis DSM 9187 7884604 YP_002894080.1 CDS Tola_2905 NC_012691.1 3187933 3188625 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cja:CJA_0286 CbbY; HAD-superfamily hydrolase complement(3187933..3188625) Tolumonas auensis DSM 9187 7884606 YP_002894081.1 CDS Tola_2906 NC_012691.1 3189383 3189961 D PFAM: regulatory protein TetR; KEGG: aha:AHA_0023 TetR family transcriptional regulator; TetR family transcriptional regulator 3189383..3189961 Tolumonas auensis DSM 9187 7884611 YP_002894082.1 CDS Tola_2907 NC_012691.1 3190003 3191124 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: asa:ASA_0024 membrane-fusion protein; RND family efflux transporter MFP subunit 3190003..3191124 Tolumonas auensis DSM 9187 7884612 YP_002894083.1 CDS Tola_2908 NC_012691.1 3191136 3194210 D PFAM: acriflavin resistance protein; KEGG: vvy:VV0037 putative multidrug resistance protein; acriflavin resistance protein 3191136..3194210 Tolumonas auensis DSM 9187 7884613 YP_002894084.1 CDS Tola_2909 NC_012691.1 3194463 3195884 D TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: aha:AHA_3139 amino acid carrier protein; amino acid carrier protein 3194463..3195884 Tolumonas auensis DSM 9187 7884614 YP_002894085.1 CDS lacZ NC_012691.1 3195936 3199013 R forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase complement(3195936..3199013) Tolumonas auensis DSM 9187 7884615 YP_002894086.1 CDS Tola_2911 NC_012691.1 3199216 3202119 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3199216..3202119) Tolumonas auensis DSM 9187 7884616 YP_002894087.1 CDS Tola_2912 NC_012691.1 3202358 3202789 R KEGG: pat:Patl_0247 ferric uptake regulator family protein; ferric uptake regulator family protein complement(3202358..3202789) Tolumonas auensis DSM 9187 7884617 YP_002894088.1 CDS Tola_2913 NC_012691.1 3203070 3203813 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0642 putative manganese transport system, ATP-asa protein; ABC transporter 3203070..3203813 Tolumonas auensis DSM 9187 7884618 YP_002894089.1 CDS Tola_2914 NC_012691.1 3203813 3204691 D PFAM: ABC-3 protein; KEGG: rru:Rru_A3703 ABC-3 transporter component; ABC transporter 3203813..3204691 Tolumonas auensis DSM 9187 7884619 YP_002894090.1 CDS Tola_2915 NC_012691.1 3204701 3205645 D PFAM: periplasmic solute binding protein; KEGG: ppr:PBPRB0544 hypothetical protein; periplasmic solute binding protein 3204701..3205645 Tolumonas auensis DSM 9187 7884620 YP_002894091.1 CDS Tola_2916 NC_012691.1 3205839 3206681 D PFAM: Pirin domain protein; KEGG: cvi:CV_1920 pirin-like protein; Pirin domain-containing protein 3205839..3206681 Tolumonas auensis DSM 9187 7884459 YP_002894092.1 CDS Tola_2917 NC_012691.1 3206754 3207101 R PFAM: protein of unknown function DUF1260; KEGG: aha:AHA_3470 hypothetical protein; hypothetical protein complement(3206754..3207101) Tolumonas auensis DSM 9187 7884460 YP_002894093.1 CDS Tola_2918 NC_012691.1 3207176 3207685 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(3207176..3207685) Tolumonas auensis DSM 9187 7884461 YP_002894094.1 CDS Tola_2919 NC_012691.1 3207710 3208291 R KEGG: aha:AHA_0699 transcriptional regulatory protein; transcriptional regulatory protein complement(3207710..3208291) Tolumonas auensis DSM 9187 7884462 YP_002894095.1 CDS Tola_2920 NC_012691.1 3208369 3208707 R PFAM: nitrogen regulatory protein P-II; KEGG: asa:ASA_0695 nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(3208369..3208707) Tolumonas auensis DSM 9187 7884463 YP_002894096.1 CDS Tola_2921 NC_012691.1 3208926 3209318 R PFAM: ribosomal protein S9; KEGG: asa:ASA_0334 30S ribosomal subunit protein S9; 30S ribosomal protein S9 complement(3208926..3209318) Tolumonas auensis DSM 9187 7884464 YP_002894097.1 CDS Tola_2922 NC_012691.1 3209333 3209761 R TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: vvy:VV0594 50S ribosomal protein L13; 50S ribosomal protein L13 complement(3209333..3209761) Tolumonas auensis DSM 9187 7884465 YP_002894098.1 CDS Tola_2923 NC_012691.1 3210128 3210526 D PFAM: protein of unknown function DUF1043; KEGG: aha:AHA_3907 hypothetical protein; hypothetical protein 3210128..3210526 Tolumonas auensis DSM 9187 7884466 YP_002894099.1 CDS Tola_2924 NC_012691.1 3210601 3211965 D KEGG: aha:AHA_3908 serine peptidase DegQ; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 3210601..3211965 Tolumonas auensis DSM 9187 7884467 YP_002894100.1 CDS Tola_2925 NC_012691.1 3212054 3213154 D KEGG: aha:AHA_3909 periplasmic serine peptidase DegS; TIGRFAM: periplasmic serine protease DegS; PFAM: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; periplasmic serine protease DegS 3212054..3213154 Tolumonas auensis DSM 9187 7884468 YP_002894101.1 CDS Tola_2926 NC_012691.1 3213200 3214459 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3213200..3214459) Tolumonas auensis DSM 9187 7884469 YP_002894102.1 CDS Tola_2927 NC_012691.1 3214511 3214765 R PFAM: BolA family protein; KEGG: sgl:SG0210 hypothetical protein; BolA family protein complement(3214511..3214765) Tolumonas auensis DSM 9187 7884470 YP_002894103.1 CDS Tola_2928 NC_012691.1 3214779 3215039 R KEGG: aha:AHA_3933 anti-anti-sigma factor family protein; anti-anti-sigma factor family protein complement(3214779..3215039) Tolumonas auensis DSM 9187 7884471 YP_002894104.1 CDS Tola_2929 NC_012691.1 3215036 3215674 R PFAM: toluene tolerance family protein; KEGG: asa:ASA_0306 toluene tolerance protein Ttg2D; toluene tolerance family protein complement(3215036..3215674) Tolumonas auensis DSM 9187 7884472 YP_002894105.1 CDS Tola_2930 NC_012691.1 3215695 3216210 R PFAM: Mammalian cell entry related domain protein; KEGG: aha:AHA_3931 Mce family protein; mammalian cell entry domain-containing protein complement(3215695..3216210) Tolumonas auensis DSM 9187 7884473 YP_002894106.1 CDS Tola_2931 NC_012691.1 3216216 3216995 R PFAM: protein of unknown function DUF140; KEGG: aha:AHA_3930 putative ABC transporter, permease protein; hypothetical protein complement(3216216..3216995) Tolumonas auensis DSM 9187 7884474 YP_002894107.1 CDS Tola_2932 NC_012691.1 3216996 3217784 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_3929 ABC transporter, ATP-binding protein; ABC transporter complement(3216996..3217784) Tolumonas auensis DSM 9187 7884475 YP_002894108.1 CDS Tola_2933 NC_012691.1 3217955 3218929 D KEGG: asa:ASA_0310 sugar phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; KpsF/GutQ family protein 3217955..3218929 Tolumonas auensis DSM 9187 7884476 YP_002894109.1 CDS Tola_2934 NC_012691.1 3218926 3219483 D TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: vvy:VV0452 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3218926..3219483 Tolumonas auensis DSM 9187 7884477 YP_002894110.1 CDS Tola_2935 NC_012691.1 3219480 3220043 D PFAM: protein of unknown function DUF1239; KEGG: asa:ASA_0312 hypothetical protein; hypothetical protein 3219480..3220043 Tolumonas auensis DSM 9187 7884478 YP_002894111.1 CDS Tola_2936 NC_012691.1 3220018 3220536 D TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: aha:AHA_3925 protein YhbN; lipopolysaccharide transport periplasmic protein LptA 3220018..3220536 Tolumonas auensis DSM 9187 7884479 YP_002894112.1 CDS Tola_2937 NC_012691.1 3220541 3221266 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_0314 ABC-type transporter, ATP binding protein; ABC transporter 3220541..3221266 Tolumonas auensis DSM 9187 7884480 YP_002894113.1 CDS Tola_2938 NC_012691.1 3221365 3222819 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: aha:AHA_3923 RNA polymerase sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 3221365..3222819 Tolumonas auensis DSM 9187 7884481 YP_002894114.1 CDS Tola_2939 NC_012691.1 3222841 3223128 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: asa:ASA_0316 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 3222841..3223128 Tolumonas auensis DSM 9187 7884482 YP_002894115.1 CDS Tola_2940 NC_012691.1 3223131 3223577 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: asa:ASA_0317 nitrogen regulatory IIA protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3223131..3223577 Tolumonas auensis DSM 9187 7884483 YP_002894116.1 CDS Tola_2941 NC_012691.1 3223584 3224450 D PFAM: conserved hypothetical protein; KEGG: asa:ASA_0318 hypothetical protein; hypothetical protein 3223584..3224450 Tolumonas auensis DSM 9187 7884484 YP_002894117.1 CDS Tola_2942 NC_012691.1 3224437 3224712 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: shw:Sputw3181_3462 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 3224437..3224712 Tolumonas auensis DSM 9187 7884485 YP_002894118.1 CDS Tola_2943 NC_012691.1 3224723 3225610 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_02300 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(3224723..3225610) Tolumonas auensis DSM 9187 7884486 YP_002894119.1 CDS Tola_2944 NC_012691.1 3225720 3227993 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3225720..3227993 Tolumonas auensis DSM 9187 7884487 YP_002894120.1 CDS Tola_2945 NC_012691.1 3228121 3228897 D TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: swd:Swoo_3859 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 3228121..3228897 Tolumonas auensis DSM 9187 7884488 YP_002894121.1 CDS Tola_2946 NC_012691.1 3229012 3229515 D KEGG: asa:ASA_0693 putative type IV pilus biogenesis protein; putative type IV pilus biogenesis protein 3229012..3229515 Tolumonas auensis DSM 9187 7884489 YP_002894122.1 CDS Tola_2947 NC_012691.1 3229527 3231509 R KEGG: asa:ASA_0692 type IV pilin biogenesis protein; type IV pilin biogenesis protein complement(3229527..3231509) Tolumonas auensis DSM 9187 7884490 YP_002894123.1 CDS Tola_2948 NC_012691.1 3231532 3231954 R KEGG: asa:ASA_0691 hypothetical protein; hypothetical protein complement(3231532..3231954) Tolumonas auensis DSM 9187 7884491 YP_002894124.1 CDS Tola_2949 NC_012691.1 3231954 3232964 R KEGG: asa:ASA_0690 type IV pilus assembly protein; type IV pilus assembly protein complement(3231954..3232964) Tolumonas auensis DSM 9187 7884492 YP_002894125.1 CDS Tola_2950 NC_012691.1 3232961 3233533 R TIGRFAM: type IV pilus modification protein PilV; KEGG: asa:ASA_0689 type IV pilus assembly protein; type IV pilus modification protein PilV complement(3232961..3233533) Tolumonas auensis DSM 9187 7884493 YP_002894126.1 CDS Tola_2951 NC_012691.1 3233540 3233944 R KEGG: cps:CPS_1217 type IV pilus biogenesis protein PilE; type IV pilus biogenesis protein PilE complement(3233540..3233944) Tolumonas auensis DSM 9187 7884494 YP_002894127.1 CDS Tola_2952 NC_012691.1 3234123 3235055 R KEGG: aha:AHA_0685 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(3234123..3235055) Tolumonas auensis DSM 9187 7884495 YP_002894128.1 CDS Tola_2953 NC_012691.1 3235132 3235626 R KEGG: asa:ASA_0685 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(3235132..3235626) Tolumonas auensis DSM 9187 7884496 YP_002894129.1 CDS Tola_2954 NC_012691.1 3235623 3238439 R TIGRFAM: isoleucyl-tRNA synthetase; KEGG: aha:AHA_0682 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(3235623..3238439) Tolumonas auensis DSM 9187 7884497 YP_002894130.1 CDS Tola_2955 NC_012691.1 3238445 3239398 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: aha:AHA_0681 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF complement(3238445..3239398) Tolumonas auensis DSM 9187 7884498 YP_002894131.1 CDS Tola_2956 NC_012691.1 3239459 3241024 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: aha:AHA_0680 integral membrane protein MviN; integral membrane protein MviN complement(3239459..3241024) Tolumonas auensis DSM 9187 7884499 YP_002894132.1 CDS rpsT NC_012691.1 3241217 3241480 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3241217..3241480 Tolumonas auensis DSM 9187 7884500 YP_002894133.1 CDS Tola_2958 NC_012691.1 3241553 3241849 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: aha:AHA_0678 nodulation protein NolR; ArsR family transcriptional regulator complement(3241553..3241849) Tolumonas auensis DSM 9187 7884501 YP_002894134.1 CDS nhaR NC_012691.1 3241929 3242825 R Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR complement(3241929..3242825) Tolumonas auensis DSM 9187 7884502 YP_002894135.1 CDS Tola_2960 NC_012691.1 3242806 3244002 R TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; KEGG: aha:AHA_0676 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(3242806..3244002) Tolumonas auensis DSM 9187 7884503 YP_002894136.1 CDS thyA NC_012691.1 3244438 3245289 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 3244438..3245289 Tolumonas auensis DSM 9187 7884504 YP_002894137.1 CDS Tola_2962 NC_012691.1 3245371 3247635 R KEGG: asa:ASA_0674 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; GAF domain protein; SMART: GAF domain protein; protein PtsP complement(3245371..3247635) Tolumonas auensis DSM 9187 7884505 YP_002894138.1 CDS Tola_2963 NC_012691.1 3247666 3248190 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(3247666..3248190) Tolumonas auensis DSM 9187 7884506 YP_002894139.1 CDS Tola_2964 NC_012691.1 3248400 3249059 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3248400..3249059 Tolumonas auensis DSM 9187 7884507 YP_002894140.1 CDS Tola_2965 NC_012691.1 3249207 3249533 D KEGG: asa:ASA_0670 hypothetical protein; hypothetical protein 3249207..3249533 Tolumonas auensis DSM 9187 7884508 YP_002894141.1 CDS rplS NC_012691.1 3249586 3249933 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(3249586..3249933) Tolumonas auensis DSM 9187 7884509 YP_002894142.1 CDS trmD NC_012691.1 3249965 3250714 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(3249965..3250714) Tolumonas auensis DSM 9187 7884510 YP_002894143.1 CDS rimM NC_012691.1 3250745 3251266 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(3250745..3251266) Tolumonas auensis DSM 9187 7884511 YP_002894144.1 CDS rpsP NC_012691.1 3251293 3251541 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3251293..3251541) Tolumonas auensis DSM 9187 7884512 YP_002894145.1 CDS Tola_2970 NC_012691.1 3257187 3257744 D PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: cps:CPS_0338 RNA-binding protein; RNP-1 like RNA-binding protein 3257187..3257744 Tolumonas auensis DSM 9187 7884517 YP_002894146.1 CDS Tola_2971 NC_012691.1 3257730 3258554 R KEGG: aha:AHA_0075 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(3257730..3258554) Tolumonas auensis DSM 9187 7884518 YP_002894147.1 CDS Tola_2972 NC_012691.1 3258593 3259573 R PFAM: aminoglycoside phosphotransferase; KEGG: pat:Patl_3574 serine/threonine protein kinase; aminoglycoside phosphotransferase complement(3258593..3259573) Tolumonas auensis DSM 9187 7884519 YP_002894148.1 CDS Tola_2973 NC_012691.1 3259581 3259847 R PFAM: protein of unknown function DUF1040; KEGG: aha:AHA_4219 hypothetical protein; hypothetical protein complement(3259581..3259847) Tolumonas auensis DSM 9187 7884520 YP_002894149.1 CDS Tola_2974 NC_012691.1 3259898 3260929 R PFAM: Squalene/phytoene synthase; KEGG: neu:NE1958 squalene and phytoene synthase; squalene/phytoene synthase complement(3259898..3260929) Tolumonas auensis DSM 9187 7884521 YP_002894150.1 CDS Tola_2975 NC_012691.1 3261051 3262520 D TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: aha:AHA_0101 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 3261051..3262520 Tolumonas auensis DSM 9187 7884522 YP_002894151.1 CDS fre NC_012691.1 3262562 3263260 D NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 3262562..3263260 Tolumonas auensis DSM 9187 7884523 YP_002894152.1 CDS Tola_2977 NC_012691.1 3263319 3263573 R PFAM: protein of unknown function DUF526; KEGG: aha:AHA_0103 hypothetical protein; hypothetical protein complement(3263319..3263573) Tolumonas auensis DSM 9187 7884524 YP_002894153.1 CDS Tola_2978 NC_012691.1 3263627 3265441 R KEGG: aha:AHA_4129 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: HRDC domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicase; ATP-dependent DNA helicase RecQ complement(3263627..3265441) Tolumonas auensis DSM 9187 7884525 YP_002894154.1 CDS Tola_2979 NC_012691.1 3265705 3266238 D KEGG: aha:AHA_4131 hypothetical protein; hypothetical protein 3265705..3266238 Tolumonas auensis DSM 9187 7884526 YP_002894155.1 CDS Tola_2980 NC_012691.1 3266362 3267240 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_0241 RarD protein; RarD protein, DMT superfamily transporter 3266362..3267240 Tolumonas auensis DSM 9187 7884527 YP_002894156.1 CDS Tola_2981 NC_012691.1 3267384 3267689 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB 3267384..3267689 Tolumonas auensis DSM 9187 7884528 YP_002894157.1 CDS Tola_2982 NC_012691.1 3267754 3269058 D KEGG: spe:Spro_4223 PTS system lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 3267754..3269058 Tolumonas auensis DSM 9187 7884529 YP_002894158.1 CDS Tola_2983 NC_012691.1 3269087 3269422 D PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: vsa:VSAL_I0707 phosphotransferase system (PTS) component IIA; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 3269087..3269422 Tolumonas auensis DSM 9187 7884530 YP_002894159.1 CDS Tola_2984 NC_012691.1 3269424 3270827 D KEGG: spe:Spro_4221 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase 3269424..3270827 Tolumonas auensis DSM 9187 7884531 YP_002894160.1 CDS Tola_2985 NC_012691.1 3270885 3271145 D PFAM: MtN3 and saliva related transmembrane protein; KEGG: pol:Bpro_4623 hypothetical protein; MtN3 and saliva related transmembrane protein 3270885..3271145 Tolumonas auensis DSM 9187 7884532 YP_002894161.1 CDS Tola_2986 NC_012691.1 3271269 3272291 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: kpn:KPN_03251 putative transcriptional regulator; transcriptional regulator, LacI family 3271269..3272291 Tolumonas auensis DSM 9187 7884533 YP_002894162.1 CDS Tola_2987 NC_012691.1 3272315 3275425 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: psa:PST_3361 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(3272315..3275425) Tolumonas auensis DSM 9187 7884534 YP_002894163.1 CDS Tola_2988 NC_012691.1 3275428 3276801 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: psa:PST_3362 heavy metal RND efflux membrane fusion protein, CzcB family; RND family efflux transporter MFP subunit complement(3275428..3276801) Tolumonas auensis DSM 9187 7884535 YP_002894164.1 CDS Tola_2989 NC_012691.1 3276882 3277253 R KEGG: ppu:PP_5388 hypothetical protein; hypothetical protein complement(3276882..3277253) Tolumonas auensis DSM 9187 7884536 YP_002894165.1 CDS Tola_2990 NC_012691.1 3277361 3277783 R hypothetical protein complement(3277361..3277783) Tolumonas auensis DSM 9187 7884537 YP_002894166.1 CDS Tola_2991 NC_012691.1 3277880 3278719 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(3277880..3278719) Tolumonas auensis DSM 9187 7884538 YP_002894167.1 CDS Tola_2992 NC_012691.1 3278958 3279263 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB 3278958..3279263 Tolumonas auensis DSM 9187 7884539 YP_002894168.1 CDS Tola_2993 NC_012691.1 3279606 3280949 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 3279606..3280949 Tolumonas auensis DSM 9187 7885514 YP_002894169.1 CDS Tola_2994 NC_012691.1 3280953 3282188 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 3280953..3282188 Tolumonas auensis DSM 9187 7885515 YP_002894170.1 CDS Tola_2995 NC_012691.1 3282181 3282954 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding domain protein; KEGG: aha:AHA_1138 Na(+)-translocating NADH-quinone reductase subunit C; NADH:ubiquinone oxidoreductase subunit C 3282181..3282954 Tolumonas auensis DSM 9187 7885516 YP_002894171.1 CDS Tola_2996 NC_012691.1 3282947 3283594 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit D; PFAM: RnfA-Nqr electron transport subunit; KEGG: kpe:KPK_4490 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NADH:ubiquinone oxidoreductase subunit D 3282947..3283594 Tolumonas auensis DSM 9187 7885517 YP_002894172.1 CDS Tola_2997 NC_012691.1 3283598 3284194 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit E; PFAM: RnfA-Nqr electron transport subunit; KEGG: aha:AHA_1140 Na(+)-translocating NADH-quinone reductase subunit E; NADH:ubiquinone oxidoreductase subunit E 3283598..3284194 Tolumonas auensis DSM 9187 7885518 YP_002894173.1 CDS Tola_2998 NC_012691.1 3284205 3285431 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 3284205..3285431 Tolumonas auensis DSM 9187 7885519 YP_002894174.1 CDS Tola_2999 NC_012691.1 3285494 3285709 D PFAM: protein of unknown function DUF539; KEGG: ppr:PBPRA0830 hypothetical protein; hypothetical protein 3285494..3285709 Tolumonas auensis DSM 9187 7885520 YP_002894175.1 CDS Tola_3000 NC_012691.1 3285716 3286465 R PFAM: protein of unknown function DUF548; KEGG: asa:ASA_4298 hypothetical protein; hypothetical protein complement(3285716..3286465) Tolumonas auensis DSM 9187 7885521 YP_002894176.1 CDS Tola_3001 NC_012691.1 3286578 3288617 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: aha:AHA_0092 oligopeptidase A; oligopeptidase A complement(3286578..3288617) Tolumonas auensis DSM 9187 7885522 YP_002894177.1 CDS Tola_3002 NC_012691.1 3288802 3290595 D PFAM: peptidase M24; creatinase; KEGG: asa:ASA_3769 aminopeptidase P; Xaa-Pro aminopeptidase 3288802..3290595 Tolumonas auensis DSM 9187 7885523 YP_002894178.1 CDS pssA NC_012691.1 3290715 3292067 D catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 3290715..3292067 Tolumonas auensis DSM 9187 7885524 YP_002894179.1 CDS Tola_3004 NC_012691.1 3292265 3292831 D hypothetical protein 3292265..3292831 Tolumonas auensis DSM 9187 7885525 YP_002894180.1 CDS Tola_3005 NC_012691.1 3292893 3294407 R TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pau:PA14_54150 sodium/proline symporter PutP; sodium/proline symporter complement(3292893..3294407) Tolumonas auensis DSM 9187 7885526 YP_002894181.1 CDS Tola_3006 NC_012691.1 3294693 3296114 D TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; KEGG: aha:AHA_0856 aspartate ammonia-lyase; aspartate ammonia-lyase 3294693..3296114 Tolumonas auensis DSM 9187 7885527 YP_002894182.1 CDS Tola_3007 NC_012691.1 3296156 3297034 R PFAM: Spermine synthase; KEGG: neu:NE0347 spermidine synthase; spermine synthase complement(3296156..3297034) Tolumonas auensis DSM 9187 7885528 YP_002894183.1 CDS Tola_3008 NC_012691.1 3297163 3297300 D PFAM: Entericidin EcnAB; KEGG: har:HEAR2414 putative bacteriolytic lipoprotein entericidin B. (partial match); entericidin EcnAB 3297163..3297300 Tolumonas auensis DSM 9187 7885529 YP_002894184.1 CDS Tola_3009 NC_012691.1 3297376 3298038 R PFAM: carbonic anhydrase; KEGG: aha:AHA_0375 carbonic anhydrase; Carbonate dehydratase complement(3297376..3298038) Tolumonas auensis DSM 9187 7885530 YP_002894185.1 CDS Tola_3010 NC_012691.1 3298110 3298964 R TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: asa:ASA_3958 RNA polymerase sigma-32 factor; RNA polymerase sigma-32 subunit RpoH complement(3298110..3298964) Tolumonas auensis DSM 9187 7885531 YP_002894186.1 CDS Tola_3011 NC_012691.1 3299285 3300253 R PFAM: protein of unknown function DUF214; KEGG: aha:AHA_0373 cell division membrane protein; hypothetical protein complement(3299285..3300253) Tolumonas auensis DSM 9187 7885532 YP_002894187.1 CDS Tola_3012 NC_012691.1 3300243 3300923 R KEGG: aha:AHA_0372 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE complement(3300243..3300923) Tolumonas auensis DSM 9187 7885533 YP_002894188.1 CDS Tola_3013 NC_012691.1 3300927 3302234 R KEGG: eum:ECUMN_3926 fused signal recognition particle (SRP) receptor: membrane binding protein ; conserved hypothetical protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(3300927..3302234) Tolumonas auensis DSM 9187 7885534 YP_002894189.1 CDS Tola_3014 NC_012691.1 3302349 3302963 D KEGG: aha:AHA_0370 methyltransferase, putative; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; methyltransferase 3302349..3302963 Tolumonas auensis DSM 9187 7885535 YP_002894190.1 CDS Tola_3015 NC_012691.1 3302960 3303280 D PFAM: protein of unknown function DUF1145; KEGG: asa:ASA_3963 hypothetical protein; hypothetical protein 3302960..3303280 Tolumonas auensis DSM 9187 7885536 YP_002894191.1 CDS Tola_3016 NC_012691.1 3303319 3305379 R Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II complement(3303319..3305379) Tolumonas auensis DSM 9187 7885537 YP_002894192.1 CDS Tola_3017 NC_012691.1 3305458 3306876 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: aha:AHA_3965 sensor histidine kinase; histidine kinase complement(3305458..3306876) Tolumonas auensis DSM 9187 7885538 YP_002894193.1 CDS Tola_3018 NC_012691.1 3306866 3307591 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: aha:AHA_3966 DNA-binding response regulator; two component transcriptional regulator, winged helix family complement(3306866..3307591) Tolumonas auensis DSM 9187 7885539 YP_002894194.1 CDS Tola_3019 NC_012691.1 3307777 3308142 D KEGG: aha:AHA_3968 hypothetical protein; hypothetical protein 3307777..3308142 Tolumonas auensis DSM 9187 7885540 YP_002894195.1 CDS Tola_3020 NC_012691.1 3308173 3310248 R PFAM: protein of unknown function DUF699 ATPase putative; domain of unknown function DUF1726; KEGG: aha:AHA_3837 hypothetical protein; hypothetical protein complement(3308173..3310248) Tolumonas auensis DSM 9187 7885541 YP_002894196.1 CDS Tola_3021 NC_012691.1 3310382 3310939 D TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: asa:ASA_0294 D,D-heptose 1,7-bisphosphate phosphatase; D,D-heptose 1,7-bisphosphate phosphatase 3310382..3310939 Tolumonas auensis DSM 9187 7885542 YP_002894197.1 CDS Tola_3022 NC_012691.1 3311352 3311960 D PFAM: DSBA oxidoreductase; KEGG: aha:AHA_4216 thiol:disulfide interchange protein DsbA; DSBA oxidoreductase 3311352..3311960 Tolumonas auensis DSM 9187 7885543 YP_002894198.1 CDS Tola_3023 NC_012691.1 3312054 3312818 R regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR complement(3312054..3312818) Tolumonas auensis DSM 9187 7885544 YP_002894199.1 CDS Tola_3024 NC_012691.1 3312954 3314246 R PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rpi:Rpic_4445 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3312954..3314246) Tolumonas auensis DSM 9187 7885545 YP_002894200.1 CDS Tola_3025 NC_012691.1 3314709 3316121 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3314709..3316121 Tolumonas auensis DSM 9187 7885546 YP_002894201.1 CDS Tola_3026 NC_012691.1 3316178 3317641 D catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 3316178..3317641 Tolumonas auensis DSM 9187 7885547 YP_002894202.1 CDS Tola_3027 NC_012691.1 3317651 3319138 D PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: eca:ECA0647 altronate hydrolase; altronate dehydratase 3317651..3319138 Tolumonas auensis DSM 9187 7885548 YP_002894203.1 CDS Tola_3028 NC_012691.1 3319138 3319683 D KEGG: vvu:VV2_1073 hypothetical protein; hypothetical protein 3319138..3319683 Tolumonas auensis DSM 9187 7885549 YP_002894204.1 CDS Tola_3029 NC_012691.1 3319803 3320294 D PFAM: protein of unknown function DUF523; KEGG: aha:AHA_4208 hypothetical protein; hypothetical protein 3319803..3320294 Tolumonas auensis DSM 9187 7885550 YP_002894205.1 CDS Tola_3030 NC_012691.1 3320337 3321440 R KEGG: pst:PSPTO_3548 hypothetical protein; hypothetical protein complement(3320337..3321440) Tolumonas auensis DSM 9187 7885551 YP_002894206.1 CDS Tola_3031 NC_012691.1 3321834 3322202 R hypothetical protein complement(3321834..3322202) Tolumonas auensis DSM 9187 7885553 YP_002894207.1 CDS Tola_3032 NC_012691.1 3322189 3323025 R KEGG: ses:SARI_02589 hypothetical protein; hypothetical protein complement(3322189..3323025) Tolumonas auensis DSM 9187 7885554 YP_002894208.1 CDS Tola_3033 NC_012691.1 3323022 3323522 R PFAM: PAAR repeat-containing protein; KEGG: pst:PSPTO_5430 hypothetical protein; PAAR repeat-containing protein complement(3323022..3323522) Tolumonas auensis DSM 9187 7885555 YP_002894209.1 CDS Tola_3034 NC_012691.1 3323693 3324175 R KEGG: vvy:VV0274 hypothetical protein; hypothetical protein complement(3323693..3324175) Tolumonas auensis DSM 9187 7885556 YP_002894210.1 CDS Tola_3035 NC_012691.1 3324156 3325223 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: pen:PSEEN4650 hypothetical protein; helix-turn-helix domain-containing protein complement(3324156..3325223) Tolumonas auensis DSM 9187 7885557 YP_002894211.1 CDS Tola_3036 NC_012691.1 3325326 3325793 D hypothetical protein 3325326..3325793 Tolumonas auensis DSM 9187 7885558 YP_002894212.1 CDS Tola_3037 NC_012691.1 3326008 3327045 D PFAM: fatty acid hydroxylase; KEGG: psa:PST_1622 sterol desaturase; fatty acid hydroxylase 3326008..3327045 Tolumonas auensis DSM 9187 7885559 YP_002894213.1 CDS Tola_3038 NC_012691.1 3327248 3328027 D PFAM: protein of unknown function DUF81; KEGG: bvi:Bcep1808_3205 hypothetical protein; hypothetical protein 3327248..3328027 Tolumonas auensis DSM 9187 7885560 YP_002894214.1 CDS Tola_3039 NC_012691.1 3328262 3329161 R PFAM: NERD domain protein; KEGG: asa:ASA_2404 hypothetical protein; NERD domain-containing protein complement(3328262..3329161) Tolumonas auensis DSM 9187 7885561 YP_002894215.1 CDS Tola_3040 NC_012691.1 3329240 3331018 R PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: she:Shewmr4_1722 methyltransferase type 12; type 12 methyltransferase complement(3329240..3331018) Tolumonas auensis DSM 9187 7885562 YP_002894216.1 CDS Tola_3041 NC_012691.1 3331213 3332328 D PFAM: peptidase M24; creatinase; KEGG: sat:SYN_01769 Xaa-pro dipeptidase; peptidase M24 3331213..3332328 Tolumonas auensis DSM 9187 7885563 YP_002894217.1 CDS Tola_3042 NC_012691.1 3332467 3332682 D hypothetical protein 3332467..3332682 Tolumonas auensis DSM 9187 7885564 YP_002894218.1 CDS Tola_3043 NC_012691.1 3332770 3333777 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(3332770..3333777) Tolumonas auensis DSM 9187 7885565 YP_002894219.1 CDS Tola_3044 NC_012691.1 3333955 3334437 R PFAM: conserved hypothetical protein; KEGG: eca:ECA3766 hypothetical protein; hypothetical protein complement(3333955..3334437) Tolumonas auensis DSM 9187 7885566 YP_002894220.1 CDS Tola_3045 NC_012691.1 3334671 3335465 R PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: kpe:KPK_1947 transcriptional regulator KdgR; transcriptional regulator, IclR family complement(3334671..3335465) Tolumonas auensis DSM 9187 7885567 YP_002894221.1 CDS Tola_3046 NC_012691.1 3335713 3336648 D PFAM: PfkB domain protein; KEGG: ypy:YPK_0101 ribokinase-like domain-containing protein; PfkB domain-containing protein 3335713..3336648 Tolumonas auensis DSM 9187 7885568 YP_002894222.1 CDS Tola_3047 NC_012691.1 3336672 3337295 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 3336672..3337295 Tolumonas auensis DSM 9187 7885569 YP_002894223.1 CDS Tola_3048 NC_012691.1 3337592 3338428 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 3337592..3338428 Tolumonas auensis DSM 9187 7885570 YP_002894224.1 CDS Tola_3049 NC_012691.1 3338553 3339314 D TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: esa:ESA_00452 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase 3338553..3339314 Tolumonas auensis DSM 9187 7885571 YP_002894225.1 CDS Tola_3050 NC_012691.1 3339436 3340344 D PFAM: oxidoreductase domain protein; KEGG: spe:Spro_2793 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 3339436..3340344 Tolumonas auensis DSM 9187 7885572 YP_002894226.1 CDS Tola_3051 NC_012691.1 3340360 3341244 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: aha:AHA_4209 phosphate acyltransferase family protein; putative acyltransferase complement(3340360..3341244) Tolumonas auensis DSM 9187 7885573 YP_002894227.1 CDS Tola_3052 NC_012691.1 3341512 3342417 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pin:Ping_2370 MoxR-like ATPase; ATPase 3341512..3342417 Tolumonas auensis DSM 9187 7885574 YP_002894228.1 CDS Tola_3053 NC_012691.1 3342414 3343388 D PFAM: protein of unknown function DUF58; KEGG: swd:Swoo_2624 hypothetical protein; hypothetical protein 3342414..3343388 Tolumonas auensis DSM 9187 7885575 YP_002894229.1 CDS Tola_3054 NC_012691.1 3343375 3345375 D PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: slo:Shew_2128 transglutaminase domain-containing protein; transglutaminase domain-containing protein 3343375..3345375 Tolumonas auensis DSM 9187 7885576 YP_002894230.1 CDS Tola_3055 NC_012691.1 3345376 3345735 R PFAM: protein of unknown function DUF486; KEGG: aha:AHA_2738 transmembrane signal peptide protein; hypothetical protein complement(3345376..3345735) Tolumonas auensis DSM 9187 7885577 YP_002894231.1 CDS Tola_3056 NC_012691.1 3345948 3347366 D KEGG: aha:AHA_2791 alkaline phosphatase, placental type; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 3345948..3347366 Tolumonas auensis DSM 9187 7885578 YP_002894232.1 CDS Tola_3057 NC_012691.1 3347388 3348761 D KEGG: asa:ASA_1538 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 3347388..3348761 Tolumonas auensis DSM 9187 7885579 YP_002894233.1 CDS Tola_3058 NC_012691.1 3348836 3349522 D KEGG: aha:AHA_2793 hypothetical protein; hypothetical protein 3348836..3349522 Tolumonas auensis DSM 9187 7885580 YP_002894234.1 CDS Tola_3059 NC_012691.1 3349560 3351080 R KEGG: asa:ASA_0118 ComM-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(3349560..3351080) Tolumonas auensis DSM 9187 7885581 YP_002894235.1 CDS Tola_3060 NC_012691.1 3351285 3352181 D KEGG: bpe:BP2606 hypothetical protein; hypothetical protein 3351285..3352181 Tolumonas auensis DSM 9187 7885582 YP_002894236.1 CDS Tola_3061 NC_012691.1 3352265 3353227 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpe:BP2605 AraC family transcriptional regulator; AraC family transcriptional regulator 3352265..3353227 Tolumonas auensis DSM 9187 7885583 YP_002894237.1 CDS Tola_3062 NC_012691.1 3353349 3354104 R negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR complement(3353349..3354104) Tolumonas auensis DSM 9187 7885584 YP_002894238.1 CDS Tola_3063 NC_012691.1 3354195 3355067 R L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase complement(3354195..3355067) Tolumonas auensis DSM 9187 7885585 YP_002894239.1 CDS Tola_3064 NC_012691.1 3355084 3355908 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: ppr:PBPRB0270 hypothetical protein; cof family hydrolase complement(3355084..3355908) Tolumonas auensis DSM 9187 7885586 YP_002894240.1 CDS Tola_3065 NC_012691.1 3356029 3357096 R KEGG: ppr:PBPRB0271 putative L-ascorbate 6-phosphate lactonase; putative L-ascorbate 6-phosphate lactonase complement(3356029..3357096) Tolumonas auensis DSM 9187 7885587 YP_002894241.1 CDS Tola_3066 NC_012691.1 3357619 3359385 D PFAM: putative sugar-specific permease SgaT/UlaA; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB0273 ascorbate-specific PTS system enzyme IIC/IIB; PTS system ascorbate-specific transporter subunits IICB 3357619..3359385 Tolumonas auensis DSM 9187 7885588 YP_002894242.1 CDS Tola_3067 NC_012691.1 3359434 3359913 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRB0274 phosphotransferase system mannitol/fructose-specific IIA component; putative PTS IIA-like nitrogen-regulatory protein PtsN 3359434..3359913 Tolumonas auensis DSM 9187 7885589 YP_002894243.1 CDS araD NC_012691.1 3359952 3360650 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 3359952..3360650 Tolumonas auensis DSM 9187 7885590 YP_002894244.1 CDS ulaD NC_012691.1 3360785 3361429 D catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 3360785..3361429 Tolumonas auensis DSM 9187 7885591 YP_002894245.1 CDS Tola_3070 NC_012691.1 3361487 3362440 D KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 3361487..3362440 Tolumonas auensis DSM 9187 7885592 YP_002894246.1 CDS Tola_3071 NC_012691.1 3362692 3364692 D TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: vvu:VV2_0553 transketolase; transketolase 3362692..3364692 Tolumonas auensis DSM 9187 7885593 YP_002894247.1 CDS Tola_3072 NC_012691.1 3364854 3365873 R KEGG: son:SO_4578 transposase, putative; transposase complement(3364854..3365873) Tolumonas auensis DSM 9187 7885594 YP_002894248.1 CDS Tola_3073 NC_012691.1 3366124 3366279 R hypothetical protein complement(3366124..3366279) Tolumonas auensis DSM 9187 7885271 YP_002894249.1 CDS Tola_3074 NC_012691.1 3366384 3367445 R KEGG: nmu:Nmul_B2808 peptidase C39, bacteriocin processing; hypothetical protein complement(3366384..3367445) Tolumonas auensis DSM 9187 7885272 YP_002894250.1 CDS Tola_3075 NC_012691.1 3367598 3367975 R hypothetical protein complement(3367598..3367975) Tolumonas auensis DSM 9187 7885273 YP_002894251.1 CDS Tola_3076 NC_012691.1 3367972 3370350 R TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: nmu:Nmul_B2808 peptidase C39, bacteriocin processing; YD repeat protein complement(3367972..3370350) Tolumonas auensis DSM 9187 7885274 YP_002894252.1 CDS Tola_3077 NC_012691.1 3370405 3370908 R KEGG: rso:RS02969 putative rhs-related protein; putative rhs-related protein complement(3370405..3370908) Tolumonas auensis DSM 9187 7885275 YP_002894253.1 CDS Tola_3078 NC_012691.1 3371079 3371444 R hypothetical protein complement(3371079..3371444) Tolumonas auensis DSM 9187 7885276 YP_002894254.1 CDS Tola_3079 NC_012691.1 3371517 3372908 R PFAM: peptidase C39 bacteriocin processing; KEGG: rso:RS00354 putative rhs-related transmembrane protein; peptidase C39 bacteriocin processing complement(3371517..3372908) Tolumonas auensis DSM 9187 7885277 YP_002894255.1 CDS Tola_3080 NC_012691.1 3373125 3373856 D PFAM: protein of unknown function DUF1566; KEGG: shw:Sputw3181_0674 hypothetical protein; hypothetical protein 3373125..3373856 Tolumonas auensis DSM 9187 7885278 YP_002894256.1 CDS Tola_3081 NC_012691.1 3373858 3374379 D PFAM: protein of unknown function DUF1566; KEGG: sde:Sde_1186 hypothetical protein; hypothetical protein 3373858..3374379 Tolumonas auensis DSM 9187 7885279 YP_002894257.1 CDS Tola_3082 NC_012691.1 3374500 3374952 D PFAM: protein of unknown function DUF1332; KEGG: ppr:PBPRA1752 hypothetical protein; hypothetical protein 3374500..3374952 Tolumonas auensis DSM 9187 7885280 YP_002894258.1 CDS Tola_3083 NC_012691.1 3374997 3375947 R PFAM: putative sugar-binding domain protein; KEGG: ypb:YPTS_2319 DeoR family transcriptional regulator; Cro/CI family transcriptional regulator complement(3374997..3375947) Tolumonas auensis DSM 9187 7885281 YP_002894259.1 CDS Tola_3084 NC_012691.1 3376136 3377539 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ypi:YpsIP31758_1812 putative D-arabinitol 4-dehydrogenase; Mannitol dehydrogenase domain-containing protein 3376136..3377539 Tolumonas auensis DSM 9187 7885282 YP_002894260.1 CDS Tola_3085 NC_012691.1 3377551 3379020 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: efe:EFER_2175 xylulose kinase (xylulokinase); xylulokinase 3377551..3379020 Tolumonas auensis DSM 9187 7885283 YP_002894261.1 CDS Tola_3086 NC_012691.1 3379110 3380402 D PFAM: major facilitator superfamily MFS_1; KEGG: ecg:E2348C_2228 D-arabitol membrane transporter; major facilitator superfamily protein 3379110..3380402 Tolumonas auensis DSM 9187 7885284 YP_002894262.1 CDS Tola_3087 NC_012691.1 3380468 3381421 D KEGG: mfa:Mfla_1655 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 3380468..3381421 Tolumonas auensis DSM 9187 7885285 YP_002894263.1 CDS Tola_3088 NC_012691.1 3381654 3383654 D TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: vvu:VV1_1537 transketolase; transketolase 3381654..3383654 Tolumonas auensis DSM 9187 7885286 YP_002894264.1 CDS Tola_3089 NC_012691.1 3383734 3384261 R PFAM: protein of unknown function DUF785; KEGG: psa:PST_2865 hypothetical protein; hypothetical protein complement(3383734..3384261) Tolumonas auensis DSM 9187 7885287 YP_002894265.1 CDS Tola_3090 NC_012691.1 3384798 3386447 D catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 3384798..3386447 Tolumonas auensis DSM 9187 7885288 YP_002894266.1 CDS Tola_3091 NC_012691.1 3386444 3386710 D PFAM: amino acid-binding ACT domain protein; KEGG: kpn:KPN_04268 acetolactate synthase 2 regulatory subunit; amino acid-binding ACT domain-containing protein 3386444..3386710 Tolumonas auensis DSM 9187 7885289 YP_002894267.1 CDS Tola_3092 NC_012691.1 3386723 3387646 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3386723..3387646 Tolumonas auensis DSM 9187 7885290 YP_002894268.1 CDS Tola_3093 NC_012691.1 3387798 3389648 D KEGG: vvu:VV1_1029 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3387798..3389648 Tolumonas auensis DSM 9187 7885291 YP_002894269.1 CDS Tola_3094 NC_012691.1 3389651 3391186 D threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 3389651..3391186 Tolumonas auensis DSM 9187 7885292 YP_002894270.1 CDS Tola_3095 NC_012691.1 3391372 3391962 D KEGG: mpt:Mpe_A1732 hypothetical protein; hypothetical protein 3391372..3391962 Tolumonas auensis DSM 9187 7885293 YP_002894271.1 CDS Tola_3096 NC_012691.1 3391949 3392584 D PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family; TetR family transcriptional regulator 3391949..3392584 Tolumonas auensis DSM 9187 7885294 YP_002894272.1 CDS Tola_3098 NC_012691.1 3393133 3394086 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cvi:CV_1079 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3393133..3394086) Tolumonas auensis DSM 9187 7885296 YP_002894273.1 CDS Tola_3099 NC_012691.1 3394162 3395634 D PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV_1078 multidrug resistence transmembrane protein; major facilitator superfamily protein 3394162..3395634 Tolumonas auensis DSM 9187 7885297 YP_002894274.1 CDS Tola_3100 NC_012691.1 3395647 3396675 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: spe:Spro_3834 LacI family transcription regulator; transcriptional regulator, LacI family complement(3395647..3396675) Tolumonas auensis DSM 9187 7885298 YP_002894275.1 CDS Tola_3101 NC_012691.1 3396887 3398293 R PFAM: glycoside hydrolase family 1; KEGG: bsu:BSU39260 beta-glucosidase; glycoside hydrolase family 1 complement(3396887..3398293) Tolumonas auensis DSM 9187 7885299 YP_002894276.1 CDS Tola_3102 NC_012691.1 3398403 3398732 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: kpn:KPN_01823 putative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit complement(3398403..3398732) Tolumonas auensis DSM 9187 7885300 YP_002894277.1 CDS Tola_3103 NC_012691.1 3398768 3400072 R KEGG: spe:Spro_4223 PTS system lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC complement(3398768..3400072) Tolumonas auensis DSM 9187 7885301 YP_002894278.1 CDS Tola_3104 NC_012691.1 3400097 3400402 R PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB complement(3400097..3400402) Tolumonas auensis DSM 9187 7885302 YP_002894279.1 CDS Tola_3105 NC_012691.1 3400665 3402074 R PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1451 glycosyl hydrolase; glycoside hydrolase family 1 complement(3400665..3402074) Tolumonas auensis DSM 9187 7885303 YP_002894280.1 CDS Tola_3106 NC_012691.1 3402137 3403534 R PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA4388 PTS system, IIABC component; PTS system transporter subunit IIC complement(3402137..3403534) Tolumonas auensis DSM 9187 7885304 YP_002894281.1 CDS Tola_3107 NC_012691.1 3403782 3405380 D PFAM: Carboxylesterase type B; KEGG: bcj:BCAM2119 carboxylesterase; Carboxylesterase 3403782..3405380 Tolumonas auensis DSM 9187 7885305 YP_002894282.1 CDS Tola_3108 NC_012691.1 3405408 3406094 R PFAM: glutamine amidotransferase class-I; KEGG: mms:mma_3646 GMP synthase (glutamine-hydrolyzing); glutamine amidotransferase complement(3405408..3406094) Tolumonas auensis DSM 9187 7885306 YP_002894283.1 CDS Tola_3109 NC_012691.1 3406209 3406676 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: swd:Swoo_3607 bacterioferritin; bacterioferritin complement(3406209..3406676) Tolumonas auensis DSM 9187 7885307 YP_002894284.1 CDS Tola_3110 NC_012691.1 3406686 3407150 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: spc:Sputcn32_0948 bacterioferritin; bacterioferritin complement(3406686..3407150) Tolumonas auensis DSM 9187 7885308 YP_002894285.1 CDS Tola_3111 NC_012691.1 3407344 3407541 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cps:CPS_1169 bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein 3407344..3407541 Tolumonas auensis DSM 9187 7885309 YP_002894286.1 CDS Tola_3112 NC_012691.1 3407724 3409985 D KEGG: tmz:Tmz1t_1354 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3407724..3409985 Tolumonas auensis DSM 9187 7885310 YP_002894287.1 CDS Tola_3113 NC_012691.1 3410051 3413191 D PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: maq:Maqu_1910 type III restriction enzyme, res subunit; type III restriction protein res subunit 3410051..3413191 Tolumonas auensis DSM 9187 7885311 YP_002894288.1 CDS Tola_3114 NC_012691.1 3413318 3413569 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: asa:ASA_P4G111 transcriptional regulator; helix-turn-helix domain-containing protein 3413318..3413569 Tolumonas auensis DSM 9187 7885312 YP_002894289.1 CDS Tola_3115 NC_012691.1 3413573 3414871 D TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: asa:ASA_P4G110 HipA protein, DNA binding regulator; HipA N-terminal domain-containing protein 3413573..3414871 Tolumonas auensis DSM 9187 7885313 YP_002894290.1 CDS Tola_3116 NC_012691.1 3414916 3416208 R PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: pfl:PFL_4430 cobyrinic acid a,c-diamide synthase; CobB/CobQ domain-containing protein glutamine amidotransferase complement(3414916..3416208) Tolumonas auensis DSM 9187 7885314 YP_002894291.1 CDS Tola_3117 NC_012691.1 3416198 3417688 R TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: ppr:PBPRB0991 cobyric acid synthase; cobyric acid synthase CobQ complement(3416198..3417688) Tolumonas auensis DSM 9187 7885315 YP_002894292.1 CDS Tola_3118 NC_012691.1 3417906 3418190 D TIGRFAM: addiction module antidote protein; KEGG: bpy:Bphyt_4548 putative transcriptional regulator; addiction module antidote protein 3417906..3418190 Tolumonas auensis DSM 9187 7885316 YP_002894293.1 CDS Tola_3119 NC_012691.1 3418193 3419122 R TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: asa:ASA_3682 tyrosine recombinase XerC; tyrosine recombinase XerC complement(3418193..3419122) Tolumonas auensis DSM 9187 7885317 YP_002894294.1 CDS Tola_3120 NC_012691.1 3419115 3419801 R PFAM: protein of unknown function DUF484; KEGG: aha:AHA_0475 hypothetical protein; hypothetical protein complement(3419115..3419801) Tolumonas auensis DSM 9187 7885318 YP_002894295.1 CDS dapF NC_012691.1 3419810 3420640 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(3419810..3420640) Tolumonas auensis DSM 9187 7885319 YP_002894296.1 CDS Tola_3122 NC_012691.1 3420656 3421906 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: asa:ASA_3679 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(3420656..3421906) Tolumonas auensis DSM 9187 7885320 YP_002894297.1 CDS Tola_3123 NC_012691.1 3422158 3422472 D TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: aha:AHA_0472 protein CyaY; iron donor protein CyaY 3422158..3422472 Tolumonas auensis DSM 9187 7885321 YP_002894298.1 CDS Tola_3124 NC_012691.1 3422478 3422762 D TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: vpa:VP0817 selenoprotein W-related protein; hypothetical protein 3422478..3422762 Tolumonas auensis DSM 9187 7885322 YP_002894299.1 CDS Tola_3125 NC_012691.1 3422812 3423171 R KEGG: hypothetical protein; hypothetical protein complement(3422812..3423171) Tolumonas auensis DSM 9187 7885323 YP_002894300.1 CDS cyaA NC_012691.1 3423292 3425784 R catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase complement(3423292..3425784) Tolumonas auensis DSM 9187 7885324 YP_002894301.1 CDS Tola_3127 NC_012691.1 3425966 3426892 D KEGG: asa:ASA_3875 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 3425966..3426892 Tolumonas auensis DSM 9187 7885325 YP_002894302.1 CDS Tola_3128 NC_012691.1 3426889 3427614 D PFAM: Uroporphyrinogen III synthase HEM4; KEGG: aha:AHA_0468 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 3426889..3427614 Tolumonas auensis DSM 9187 7885326 YP_002894303.1 CDS Tola_3129 NC_012691.1 3427632 3428702 D PFAM: protein of unknown function DUF513 hemX; KEGG: asa:ASA_3877 uroporphyrin-III C-methyltransferase; Uroporphyrinogen-III C-methyltransferase 3427632..3428702 Tolumonas auensis DSM 9187 7885327 YP_002894304.1 CDS Tola_3130 NC_012691.1 3428714 3429883 D PFAM: HemY domain protein; KEGG: aha:AHA_0466 HemY protein; HemY domain-containing protein 3428714..3429883 Tolumonas auensis DSM 9187 7885328 YP_002894305.1 CDS Tola_3131 NC_012691.1 3430217 3431431 D PFAM: Rh family protein/ammonium transporter; KEGG: ppr:PBPRB0379 putative ammonium permease; Rh family protein/ammonium transporter 3430217..3431431 Tolumonas auensis DSM 9187 7885329 YP_002894306.1 CDS atpC NC_012691.1 3431568 3431990 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3431568..3431990) Tolumonas auensis DSM 9187 7885330 YP_002894307.1 CDS Tola_3133 NC_012691.1 3432008 3433396 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3432008..3433396) Tolumonas auensis DSM 9187 7885331 YP_002894308.1 CDS Tola_3134 NC_012691.1 3433429 3434292 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3433429..3434292) Tolumonas auensis DSM 9187 7885332 YP_002894309.1 CDS Tola_3135 NC_012691.1 3434337 3435878 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3434337..3435878) Tolumonas auensis DSM 9187 7885333 YP_002894310.1 CDS Tola_3136 NC_012691.1 3435893 3436426 R TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: asa:ASA_4353 F0F1 ATP synthase subunit delta; ATP synthase F1 subunit delta complement(3435893..3436426) Tolumonas auensis DSM 9187 7885334 YP_002894311.1 CDS Tola_3137 NC_012691.1 3436441 3436911 R TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: eca:ECA4516 F0F1 ATP synthase subunit B; ATP synthase F0 subunit B complement(3436441..3436911) Tolumonas auensis DSM 9187 7885335 YP_002894312.1 CDS Tola_3138 NC_012691.1 3436951 3437178 R TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: eta:ETA_34800 ATP synthase, F0 complex, C subunit; ATP synthase F0 subunit C complement(3436951..3437178) Tolumonas auensis DSM 9187 7885336 YP_002894313.1 CDS Tola_3139 NC_012691.1 3437223 3438002 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3437223..3438002) Tolumonas auensis DSM 9187 7885337 YP_002894314.1 CDS Tola_3140 NC_012691.1 3438011 3438400 R PFAM: ATP synthase I chain; KEGG: asa:ASA_4357 F0F1 ATP synthase subunit I; ATP synthase I chain complement(3438011..3438400) Tolumonas auensis DSM 9187 7885338 YP_002894315.1 CDS Tola_3141 NC_012691.1 3438606 3439514 R KEGG: aha:AHA_4270 chromosome partitioning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein complement(3438606..3439514) Tolumonas auensis DSM 9187 7885339 YP_002894316.1 CDS Tola_3142 NC_012691.1 3439526 3440317 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aha:AHA_4271 Soj protein; Cobyrinic acid ac-diamide synthase complement(3439526..3440317) Tolumonas auensis DSM 9187 7885340 YP_002894317.1 CDS Tola_3143 NC_012691.1 3440329 3440958 R TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: aha:AHA_4272 methyltransferase GidB; methyltransferase GidB complement(3440329..3440958) Tolumonas auensis DSM 9187 7885341 YP_002894318.1 CDS Tola_3144 NC_012691.1 3440963 3442852 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3440963..3442852) Tolumonas auensis DSM 9187 7885342 YP_002894319.1 CDS Tola_3145 NC_012691.1 3442996 3443133 R hypothetical protein complement(3442996..3443133) Tolumonas auensis DSM 9187 7885343 YP_002894320.1 CDS Tola_3146 NC_012691.1 3443404 3443859 R PFAM: flavodoxin/nitric oxide synthase; KEGG: asa:ASA_4362 protein MioC, involved in modulation of initiation of chromosome replication at OriC; flavodoxin/nitric oxide synthase complement(3443404..3443859) Tolumonas auensis DSM 9187 7885344 YP_002894321.1 CDS Tola_3147 NC_012691.1 3443922 3444485 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(3443922..3444485) Tolumonas auensis DSM 9187 7885345 YP_002894322.1 CDS Tola_3148 NC_012691.1 3444520 3445686 R KEGG: sbl:Sbal_4517 hypothetical protein; hypothetical protein complement(3444520..3445686) Tolumonas auensis DSM 9187 7885346 YP_002894323.1 CDS Tola_3149 NC_012691.1 3445782 3446663 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_3991 transporter; hypothetical protein 3445782..3446663 Tolumonas auensis DSM 9187 7885347 YP_002894324.1 CDS Tola_3150 NC_012691.1 3446692 3447762 D PFAM: protein of unknown function UPF0118; KEGG: bpy:Bphyt_1381 protein of unknown function UPF0118; hypothetical protein 3446692..3447762 Tolumonas auensis DSM 9187 7885348 YP_002894325.1 CDS Tola_3151 NC_012691.1 3447766 3448677 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azo:azo2867 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3447766..3448677) Tolumonas auensis DSM 9187 7885349 YP_002894326.1 CDS Tola_3152 NC_012691.1 3448848 3449159 D KEGG: tbd:Tbd_1332 hypothetical protein; hypothetical protein 3448848..3449159 Tolumonas auensis DSM 9187 7885350 YP_002894327.1 CDS Tola_3153 NC_012691.1 3449243 3449461 D KEGG: pag:PLES_14231 hypothetical protein; hypothetical protein 3449243..3449461 Tolumonas auensis DSM 9187 7885351 YP_002894328.1 CDS Tola_3154 NC_012691.1 3449642 3449947 D SMART: regulatory protein ArsR; KEGG: bmj:BMULJ_04608 ArsR family transcriptional regulator; ArsR family transcriptional regulator 3449642..3449947 Tolumonas auensis DSM 9187 7883377 YP_002894329.1 CDS Tola_3155 NC_012691.1 3449967 3451016 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bvi:Bcep1808_5285 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3449967..3451016 Tolumonas auensis DSM 9187 7883378 YP_002894330.1 CDS Tola_3156 NC_012691.1 3451083 3453092 R TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: ypb:YPTS_3330 transketolase; transketolase complement(3451083..3453092) Tolumonas auensis DSM 9187 7883379 YP_002894331.1 CDS Tola_3157 NC_012691.1 3453116 3454069 R KEGG: spe:Spro_3479 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase A complement(3453116..3454069) Tolumonas auensis DSM 9187 7883380 YP_002894332.1 CDS Tola_3158 NC_012691.1 3454104 3454562 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(3454104..3454562) Tolumonas auensis DSM 9187 7883381 YP_002894333.1 CDS Tola_3159 NC_012691.1 3454639 3455607 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(3454639..3455607) Tolumonas auensis DSM 9187 7883382 YP_002894334.1 CDS Tola_3160 NC_012691.1 3455747 3457462 R PFAM: Sorbitol phosphotransferase protein II domain protein; type III effector Hrp-dependent outers; KEGG: kpe:KPK_3431 sorbitol phosphotransferase enzyme II; Protein-N(pi)-phosphohistidine--sugar phosphotransferase complement(3455747..3457462) Tolumonas auensis DSM 9187 7883383 YP_002894335.1 CDS pdxA NC_012691.1 3457501 3458508 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(3457501..3458508) Tolumonas auensis DSM 9187 7883384 YP_002894336.1 CDS Tola_3162 NC_012691.1 3458797 3459582 D TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: kpe:KPK_3433 triosephosphate isomerase; triosephosphate isomerase 3458797..3459582 Tolumonas auensis DSM 9187 7883385 YP_002894337.1 CDS Tola_3163 NC_012691.1 3459634 3460596 D PFAM: putative sugar-binding domain protein; KEGG: kpe:KPK_3434 putative sugar-binding domain protein; Cro/CI family transcriptional regulator 3459634..3460596 Tolumonas auensis DSM 9187 7883386 YP_002894338.1 CDS Tola_3164 NC_012691.1 3460875 3461687 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vfm:VFMJ11_A0422 NADH oxidase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3460875..3461687 Tolumonas auensis DSM 9187 7883387 YP_002894339.1 CDS Tola_3165 NC_012691.1 3461924 3462619 D KEGG: rpi:Rpic_1497 mucin-associated surface protein; mucin-associated surface protein 3461924..3462619 Tolumonas auensis DSM 9187 7883388 YP_002894340.1 CDS trmE NC_012691.1 3462689 3464050 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3462689..3464050) Tolumonas auensis DSM 9187 7883389 YP_002894341.1 CDS Tola_3167 NC_012691.1 3464160 3465809 R PFAM: 60 kDa inner membrane insertion protein; KEGG: aha:AHA_4281 membrane protein OxaA; 60 kDa inner membrane insertion protein complement(3464160..3465809) Tolumonas auensis DSM 9187 7883390 YP_002894342.1 CDS Tola_3168 NC_012691.1 3465812 3466069 R PFAM: protein of unknown function DUF37; KEGG: asa:ASA_4383 hypothetical protein; hypothetical protein complement(3465812..3466069) Tolumonas auensis DSM 9187 7883391 YP_002894343.1 CDS rnpA NC_012691.1 3466036 3466395 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3466036..3466395) Tolumonas auensis DSM 9187 7883392 YP_002894344.1 CDS Tola_3170 NC_012691.1 3466395 3466532 R TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: pmr:PMI3131 50S ribosomal protein L34; 50S ribosomal protein L34 complement(3466395..3466532) Tolumonas auensis DSM 9187 7883393 YP_002894345.1 CDS Tola_3171 NC_012691.1 3466787 3470257 R PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: sde:Sde_3531 2-acyl-glycerophospho-ethanolamine acyltransferase; 2-acylglycerophosphoethanolamine acyltransferase complement(3466787..3470257) Tolumonas auensis DSM 9187 7883394 YP_002894346.1 CDS Tola_3172 NC_012691.1 3470397 3471152 D SMART: helix-turn-helix domain protein; KEGG: sde:Sde_3530 hypothetical protein; helix-turn-helix domain-containing protein 3470397..3471152 Tolumonas auensis DSM 9187 7883395 Tola_R0002 tRNA Tola_R0002 NC_012691.1 27896 27972 D tRNA-Ile 27896..27972 Tolumonas auensis DSM 9187 7883898 Tola_R0003 tRNA Tola_R0003 NC_012691.1 27984 28059 D tRNA-Ala 27984..28059 Tolumonas auensis DSM 9187 7883899 Tola_R0006 tRNA Tola_R0006 NC_012691.1 31457 31533 D tRNA-Asp 31457..31533 Tolumonas auensis DSM 9187 7883902 Tola_R0008 tRNA Tola_R0008 NC_012691.1 170398 170474 D tRNA-Ile 170398..170474 Tolumonas auensis DSM 9187 7886151 Tola_R0009 tRNA Tola_R0009 NC_012691.1 170486 170561 D tRNA-Ala 170486..170561 Tolumonas auensis DSM 9187 7886152 Tola_R0012 tRNA Tola_R0012 NC_012691.1 173959 174035 D tRNA-Asp 173959..174035 Tolumonas auensis DSM 9187 7886155 Tola_R0015 tRNA Tola_R0015 NC_012691.1 207055 207130 D tRNA-Glu 207055..207130 Tolumonas auensis DSM 9187 7885701 Tola_R0019 tRNA Tola_R0019 NC_012691.1 367070 367145 D tRNA-Glu 367070..367145 Tolumonas auensis DSM 9187 7884140 Tola_R0022 tRNA Tola_R0022 NC_012691.1 370474 370550 D tRNA-Asp 370474..370550 Tolumonas auensis DSM 9187 7884143 Tola_R0024 tRNA Tola_R0024 NC_012691.1 615849 615934 R tRNA-Leu complement(615849..615934) Tolumonas auensis DSM 9187 7883363 Tola_R0025 tRNA Tola_R0025 NC_012691.1 690899 690974 D tRNA-Ala 690899..690974 Tolumonas auensis DSM 9187 7886478 Tola_R0026 tRNA Tola_R0026 NC_012691.1 691011 691086 D tRNA-Ala 691011..691086 Tolumonas auensis DSM 9187 7886479 Tola_R0027 tRNA Tola_R0027 NC_012691.1 829640 829716 R tRNA-Pro complement(829640..829716) Tolumonas auensis DSM 9187 7885795 Tola_R0029 tRNA Tola_R0029 NC_012691.1 911795 911870 D tRNA-Glu 911795..911870 Tolumonas auensis DSM 9187 7883845 Tola_R0032 tRNA Tola_R0032 NC_012691.1 915170 915245 D tRNA-Thr 915170..915245 Tolumonas auensis DSM 9187 7883848 Tola_R0033 tRNA Tola_R0033 NC_012691.1 988087 988171 R tRNA-Tyr complement(988087..988171) Tolumonas auensis DSM 9187 7884891 Tola_R0034 tRNA Tola_R0034 NC_012691.1 988205 988289 R tRNA-Tyr complement(988205..988289) Tolumonas auensis DSM 9187 7884892 Tola_R0036 tRNA Tola_R0036 NC_012691.1 1040482 1040557 R tRNA-Phe complement(1040482..1040557) Tolumonas auensis DSM 9187 7884056 Tola_R0037 tRNA Tola_R0037 NC_012691.1 1040569 1040644 R tRNA-Thr complement(1040569..1040644) Tolumonas auensis DSM 9187 7884057 Tola_R0038 tRNA Tola_R0038 NC_012691.1 1040691 1040766 R tRNA-Phe complement(1040691..1040766) Tolumonas auensis DSM 9187 7884058 Tola_R0039 tRNA Tola_R0039 NC_012691.1 1215582 1215657 R tRNA-Asn complement(1215582..1215657) Tolumonas auensis DSM 9187 7886163 Tola_R0040 tRNA Tola_R0040 NC_012691.1 1215662 1215737 R tRNA-Asn complement(1215662..1215737) Tolumonas auensis DSM 9187 7886164 Tola_R0041 tRNA Tola_R0041 NC_012691.1 1215753 1215828 R tRNA-Asn complement(1215753..1215828) Tolumonas auensis DSM 9187 7886165 Tola_R0042 tRNA Tola_R0042 NC_012691.1 1216276 1216351 R tRNA-Asn complement(1216276..1216351) Tolumonas auensis DSM 9187 7886166 Tola_R0043 tRNA Tola_R0043 NC_012691.1 1236372 1236447 D tRNA-Thr 1236372..1236447 Tolumonas auensis DSM 9187 7886190 Tola_R0044 tRNA Tola_R0044 NC_012691.1 1328268 1328358 D tRNA-Ser 1328268..1328358 Tolumonas auensis DSM 9187 7884002 Tola_R0045 tRNA Tola_R0045 NC_012691.1 1355782 1355857 R tRNA-Arg complement(1355782..1355857) Tolumonas auensis DSM 9187 7884027 Tola_R0046 tRNA Tola_R0046 NC_012691.1 1478456 1478532 D tRNA-Met 1478456..1478532 Tolumonas auensis DSM 9187 7885106 Tola_R0047 tRNA Tola_R0047 NC_012691.1 1478747 1478823 D tRNA-Met 1478747..1478823 Tolumonas auensis DSM 9187 7885107 Tola_R0048 tRNA Tola_R0048 NC_012691.1 1530592 1530667 D tRNA-Gly 1530592..1530667 Tolumonas auensis DSM 9187 7884334 Tola_R0049 tRNA Tola_R0049 NC_012691.1 1530674 1530747 D tRNA-Cys 1530674..1530747 Tolumonas auensis DSM 9187 7884335 Tola_R0050 tRNA Tola_R0050 NC_012691.1 1569028 1569104 R tRNA-Met complement(1569028..1569104) Tolumonas auensis DSM 9187 7884370 Tola_R0051 tRNA Tola_R0051 NC_012691.1 1716951 1717026 D tRNA-Gly 1716951..1717026 Tolumonas auensis DSM 9187 7885151 Tola_R0052 tRNA Tola_R0052 NC_012691.1 1717033 1717106 D tRNA-Cys 1717033..1717106 Tolumonas auensis DSM 9187 7885152 Tola_R0053 tRNA Tola_R0053 NC_012691.1 1717113 1717199 D tRNA-Leu 1717113..1717199 Tolumonas auensis DSM 9187 7885153 Tola_R0054 tRNA Tola_R0054 NC_012691.1 1748733 1748809 D tRNA-Val 1748733..1748809 Tolumonas auensis DSM 9187 7885188 Tola_R0055 tRNA Tola_R0055 NC_012691.1 1748839 1748915 D tRNA-Val 1748839..1748915 Tolumonas auensis DSM 9187 7885189 Tola_R0056 tRNA Tola_R0056 NC_012691.1 2050957 2051041 R tRNA-Leu complement(2050957..2051041) Tolumonas auensis DSM 9187 7884247 Tola_R0057 tRNA Tola_R0057 NC_012691.1 2051058 2051133 R tRNA-His complement(2051058..2051133) Tolumonas auensis DSM 9187 7884248 Tola_R0058 tRNA Tola_R0058 NC_012691.1 2051185 2051260 R tRNA-Ser complement(2051185..2051260) Tolumonas auensis DSM 9187 7884249 Tola_R0059 tRNA Tola_R0059 NC_012691.1 2094028 2094112 R tRNA-Leu complement(2094028..2094112) Tolumonas auensis DSM 9187 7884286 Tola_R0060 tRNA Tola_R0060 NC_012691.1 2094129 2094204 R tRNA-His complement(2094129..2094204) Tolumonas auensis DSM 9187 7884287 Tola_R0061 tRNA Tola_R0061 NC_012691.1 2094256 2094332 R tRNA-Arg complement(2094256..2094332) Tolumonas auensis DSM 9187 7884288 Tola_R0062 tRNA Tola_R0062 NC_012691.1 2094345 2094421 R tRNA-Pro complement(2094345..2094421) Tolumonas auensis DSM 9187 7884289 Tola_R0063 tRNA Tola_R0063 NC_012691.1 2112309 2112396 D tRNA-Ser 2112309..2112396 Tolumonas auensis DSM 9187 7883220 Tola_R0064 tRNA Tola_R0064 NC_012691.1 2283130 2283205 D tRNA-Thr 2283130..2283205 Tolumonas auensis DSM 9187 7883661 Tola_R0065 tRNA Tola_R0065 NC_012691.1 2283216 2283291 D tRNA-Phe 2283216..2283291 Tolumonas auensis DSM 9187 7883662 Tola_R0067 tRNA Tola_R0067 NC_012691.1 2468299 2468375 R tRNA-Met complement(2468299..2468375) Tolumonas auensis DSM 9187 7886013 Tola_R0068 tRNA Tola_R0068 NC_012691.1 2468425 2468509 R tRNA-Leu complement(2468425..2468509) Tolumonas auensis DSM 9187 7886014 Tola_R0070 tRNA Tola_R0070 NC_012691.1 2532169 2532245 D tRNA-Met 2532169..2532245 Tolumonas auensis DSM 9187 7886077 Tola_R0071 tRNA Tola_R0071 NC_012691.1 2532250 2532324 D tRNA-Gln 2532250..2532324 Tolumonas auensis DSM 9187 7886078 Tola_R0072 tRNA Tola_R0072 NC_012691.1 2532346 2532420 D tRNA-Gln 2532346..2532420 Tolumonas auensis DSM 9187 7886079 Tola_R0073 tRNA Tola_R0073 NC_012691.1 2532441 2532515 D tRNA-Gln 2532441..2532515 Tolumonas auensis DSM 9187 7886080 Tola_R0074 tRNA Tola_R0074 NC_012691.1 2532527 2532603 D tRNA-Met 2532527..2532603 Tolumonas auensis DSM 9187 7886244 Tola_R0075 tRNA Tola_R0075 NC_012691.1 2582935 2583009 R tRNA-Gly complement(2582935..2583009) Tolumonas auensis DSM 9187 7886293 Tola_R0076 tRNA Tola_R0076 NC_012691.1 2586921 2586994 R tRNA-Gly complement(2586921..2586994) Tolumonas auensis DSM 9187 7886298 Tola_R0077 tRNA Tola_R0077 NC_012691.1 2621056 2621131 R tRNA-Gly complement(2621056..2621131) Tolumonas auensis DSM 9187 7885925 Tola_R0078 tRNA Tola_R0078 NC_012691.1 2718872 2718947 R tRNA-Gly complement(2718872..2718947) Tolumonas auensis DSM 9187 7885209 Tola_R0079 tRNA Tola_R0079 NC_012691.1 2718975 2719050 R tRNA-Gly complement(2718975..2719050) Tolumonas auensis DSM 9187 7885210 Tola_R0080 tRNA Tola_R0080 NC_012691.1 2719076 2719151 R tRNA-Gly complement(2719076..2719151) Tolumonas auensis DSM 9187 7885211 Tola_R0081 tRNA Tola_R0081 NC_012691.1 2876444 2876528 D tRNA-Leu 2876444..2876528 Tolumonas auensis DSM 9187 7885437 Tola_R0082 tRNA Tola_R0082 NC_012691.1 2876570 2876654 D tRNA-Leu 2876570..2876654 Tolumonas auensis DSM 9187 7885438 Tola_R0083 tRNA Tola_R0083 NC_012691.1 2876701 2876785 D tRNA-Leu 2876701..2876785 Tolumonas auensis DSM 9187 7885439 Tola_R0084 tRNA Tola_R0084 NC_012691.1 2925756 2925831 D tRNA-Met 2925756..2925831 Tolumonas auensis DSM 9187 7885481 Tola_R0088 tRNA Tola_R0088 NC_012691.1 2965963 2966038 R tRNA-Lys complement(2965963..2966038) Tolumonas auensis DSM 9187 7884702 Tola_R0089 tRNA Tola_R0089 NC_012691.1 2966060 2966135 R tRNA-Val complement(2966060..2966135) Tolumonas auensis DSM 9187 7884703 Tola_R0090 tRNA Tola_R0090 NC_012691.1 2966146 2966221 R tRNA-Lys complement(2966146..2966221) Tolumonas auensis DSM 9187 7884704 Tola_R0091 tRNA Tola_R0091 NC_012691.1 2966241 2966316 R tRNA-Val complement(2966241..2966316) Tolumonas auensis DSM 9187 7884705 Tola_R0092 tRNA Tola_R0092 NC_012691.1 2966364 2966439 R tRNA-Val complement(2966364..2966439) Tolumonas auensis DSM 9187 7884706 Tola_R0093 tRNA Tola_R0093 NC_012691.1 2966457 2966532 R tRNA-Lys complement(2966457..2966532) Tolumonas auensis DSM 9187 7884707 Tola_R0094 tRNA Tola_R0094 NC_012691.1 2966554 2966629 R tRNA-Val complement(2966554..2966629) Tolumonas auensis DSM 9187 7884708 Tola_R0095 tRNA Tola_R0095 NC_012691.1 2966640 2966715 R tRNA-Lys complement(2966640..2966715) Tolumonas auensis DSM 9187 7884709 Tola_R0096 tRNA Tola_R0096 NC_012691.1 2991666 2991742 R tRNA-Arg complement(2991666..2991742) Tolumonas auensis DSM 9187 7884737 Tola_R0097 tRNA Tola_R0097 NC_012691.1 2991771 2991847 R tRNA-Arg complement(2991771..2991847) Tolumonas auensis DSM 9187 7884738 Tola_R0098 tRNA Tola_R0098 NC_012691.1 2991876 2991952 R tRNA-Arg complement(2991876..2991952) Tolumonas auensis DSM 9187 7884739 Tola_R0099 tRNA Tola_R0099 NC_012691.1 2991981 2992057 R tRNA-Arg complement(2991981..2992057) Tolumonas auensis DSM 9187 7884740 Tola_R0100 tRNA Tola_R0100 NC_012691.1 2992068 2992160 R tRNA-Ser complement(2992068..2992160) Tolumonas auensis DSM 9187 7884741 Tola_R0101 tRNA Tola_R0101 NC_012691.1 3036070 3036145 R tRNA-Thr complement(3036070..3036145) Tolumonas auensis DSM 9187 7885595 Tola_R0104 tRNA Tola_R0104 NC_012691.1 3039514 3039589 R tRNA-Ala complement(3039514..3039589) Tolumonas auensis DSM 9187 7885598 Tola_R0105 tRNA Tola_R0105 NC_012691.1 3039601 3039677 R tRNA-Ile complement(3039601..3039677) Tolumonas auensis DSM 9187 7885599 Tola_R0107 tRNA Tola_R0107 NC_012691.1 3065696 3065772 R tRNA-Trp complement(3065696..3065772) Tolumonas auensis DSM 9187 7885622 Tola_R0108 tRNA Tola_R0108 NC_012691.1 3067106 3067180 R tRNA-Gly complement(3067106..3067180) Tolumonas auensis DSM 9187 7885624 Tola_R0109 tRNA Tola_R0109 NC_012691.1 3067206 3067290 R tRNA-Tyr complement(3067206..3067290) Tolumonas auensis DSM 9187 7885625 Tola_R0110 tRNA Tola_R0110 NC_012691.1 3081395 3081471 R tRNA-Trp complement(3081395..3081471) Tolumonas auensis DSM 9187 7885638 Tola_R0111 tRNA Tola_R0111 NC_012691.1 3187683 3187759 R tRNA-Pro complement(3187683..3187759) Tolumonas auensis DSM 9187 7884605 Tola_R0112 tRNA Tola_R0112 NC_012691.1 3188777 3188853 R tRNA-Pro complement(3188777..3188853) Tolumonas auensis DSM 9187 7884607 Tola_R0113 tRNA Tola_R0113 NC_012691.1 3188878 3188962 R tRNA-Leu complement(3188878..3188962) Tolumonas auensis DSM 9187 7884608 Tola_R0114 tRNA Tola_R0114 NC_012691.1 3188987 3189062 R tRNA-His complement(3188987..3189062) Tolumonas auensis DSM 9187 7884609 Tola_R0115 tRNA Tola_R0115 NC_012691.1 3189104 3189180 R tRNA-Arg complement(3189104..3189180) Tolumonas auensis DSM 9187 7884610 Tola_R0118 tRNA Tola_R0118 NC_012691.1 3255005 3255080 R tRNA-Glu complement(3255005..3255080) Tolumonas auensis DSM 9187 7884515 Tola_R0120 tRNA Tola_R0120 NC_012691.1 3321648 3321738 D tRNA-Ser 3321648..3321738 Tolumonas auensis DSM 9187 7885552 Tola_R0001 rRNA Tola_R0001 NC_012691.1 26293 27826 D 16S ribosomal RNA 26293..27826 Tolumonas auensis DSM 9187 7883897 Tola_R0004 rRNA Tola_R0004 NC_012691.1 28266 31152 D 23S ribosomal RNA 28266..31152 Tolumonas auensis DSM 9187 7883900 Tola_R0005 rRNA Tola_R0005 NC_012691.1 31281 31394 D 5S ribosomal RNA 31281..31394 Tolumonas auensis DSM 9187 7883901 Tola_R0007 rRNA Tola_R0007 NC_012691.1 168795 170328 D 16S ribosomal RNA 168795..170328 Tolumonas auensis DSM 9187 7886150 Tola_R0010 rRNA Tola_R0010 NC_012691.1 170768 173654 D 23S ribosomal RNA 170768..173654 Tolumonas auensis DSM 9187 7886153 Tola_R0011 rRNA Tola_R0011 NC_012691.1 173783 173896 D 5S ribosomal RNA 173783..173896 Tolumonas auensis DSM 9187 7886154 Tola_R0013 rRNA Tola_R0013 NC_012691.1 174093 174206 D 5S ribosomal RNA 174093..174206 Tolumonas auensis DSM 9187 7886156 Tola_R0014 rRNA Tola_R0014 NC_012691.1 205472 207005 D 16S ribosomal RNA 205472..207005 Tolumonas auensis DSM 9187 7885700 Tola_R0016 rRNA Tola_R0016 NC_012691.1 207268 210154 D 23S ribosomal RNA 207268..210154 Tolumonas auensis DSM 9187 7885702 Tola_R0017 rRNA Tola_R0017 NC_012691.1 210283 210396 D 5S ribosomal RNA 210283..210396 Tolumonas auensis DSM 9187 7885703 Tola_R0018 rRNA Tola_R0018 NC_012691.1 365487 367020 D 16S ribosomal RNA 365487..367020 Tolumonas auensis DSM 9187 7884139 Tola_R0020 rRNA Tola_R0020 NC_012691.1 367283 370169 D 23S ribosomal RNA 367283..370169 Tolumonas auensis DSM 9187 7884141 Tola_R0021 rRNA Tola_R0021 NC_012691.1 370298 370411 D 5S ribosomal RNA 370298..370411 Tolumonas auensis DSM 9187 7884142 Tola_R0028 rRNA Tola_R0028 NC_012691.1 910212 911745 D 16S ribosomal RNA 910212..911745 Tolumonas auensis DSM 9187 7883844 Tola_R0030 rRNA Tola_R0030 NC_012691.1 912009 914895 D 23S ribosomal RNA 912009..914895 Tolumonas auensis DSM 9187 7883846 Tola_R0031 rRNA Tola_R0031 NC_012691.1 915023 915136 D 5S ribosomal RNA 915023..915136 Tolumonas auensis DSM 9187 7883847 Tola_R0085 rRNA Tola_R0085 NC_012691.1 2939779 2939892 R 5S ribosomal RNA complement(2939779..2939892) Tolumonas auensis DSM 9187 7885495 Tola_R0086 rRNA Tola_R0086 NC_012691.1 2940021 2942907 R 23S ribosomal RNA complement(2940021..2942907) Tolumonas auensis DSM 9187 7885496 Tola_R0087 rRNA Tola_R0087 NC_012691.1 2943214 2944747 R 16S ribosomal RNA complement(2943214..2944747) Tolumonas auensis DSM 9187 7885497 Tola_R0102 rRNA Tola_R0102 NC_012691.1 3036179 3036292 R 5S ribosomal RNA complement(3036179..3036292) Tolumonas auensis DSM 9187 7885596 Tola_R0103 rRNA Tola_R0103 NC_012691.1 3036421 3039307 R 23S ribosomal RNA complement(3036421..3039307) Tolumonas auensis DSM 9187 7885597 Tola_R0106 rRNA Tola_R0106 NC_012691.1 3039747 3041280 R 16S ribosomal RNA complement(3039747..3041280) Tolumonas auensis DSM 9187 7885600 Tola_R0116 rRNA Tola_R0116 NC_012691.1 3251739 3251852 R 5S ribosomal RNA complement(3251739..3251852) Tolumonas auensis DSM 9187 7884513 Tola_R0117 rRNA Tola_R0117 NC_012691.1 3251981 3254867 R 23S ribosomal RNA complement(3251981..3254867) Tolumonas auensis DSM 9187 7884514 Tola_R0119 rRNA Tola_R0119 NC_012691.1 3255130 3256663 R 16S ribosomal RNA complement(3255130..3256663) Tolumonas auensis DSM 9187 7884516