NC_010741.1 upstream YP_001933009.1 D -79 3 GATAATCTACACCCACAAAGCAACGCGCGTATAACCTCTTCGTTTATTGCAGGCAAAATACAATAGGTTGTATCATAGGTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:-79:3:D YP_001933009.1|Treponema_pallidum_SS14_uid58977|dnaA NC_010741.1 upstream YP_001933010.1 D 1399 1640 GGCGTAGACACTGAATTCGATGGGGATAAGTGGTGGATAAAAGAATATAAATTAGTCATTACACTTTACTCACGAATATCCCCCTTTTTTTAGAGAAAAAATATACTTTCTTCACAAGCTTGTGTGCGGTTTTTGTTTGGTAATTCTCGAGACATAAGCACTTATCCAGATATTCACAGTTACTATTATGTGATACGACTACATTCTTTATACTTATAAGATTAATAAGGAGGAAACTAACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1399:1640:D YP_001933010.1|Treponema_pallidum_SS14_uid58977|dnaN NC_010741.1 upstream YP_001933011.1 D 2623 2622 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:2623:2622:D YP_001933011.1|Treponema_pallidum_SS14_uid58977|recF NC_010741.1 upstream YP_001933012.1 D 3827 3826 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:3827:3826:D YP_001933012.1|Treponema_pallidum_SS14_uid58977|TPASS_0004 NC_010741.1 upstream YP_001933013.1 D 4265 4390 TTTTGCGGATGGGATTCGACGGATCTGTTCAAAGTCCATAGGACTGCGGTTTTTCTTGCGTGCAGCCTATGCACGACTGTGTCTCTCCTTGAACGCAGTATGGCTTTGCGTTAGAATGCCCGCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:4265:4390:D YP_001933013.1|Treponema_pallidum_SS14_uid58977|gyrA NC_010741.1 upstream YP_001933014.1 D 6833 7013 TGGGCTCTGGGGTATATTTCTCCGTGAGTGGCTGTGTATATGTTGTGAGTATTGTGGATAATGTGCGTGCAGAAGTTGATGTTTCACGTGAAACGTGTGGGATGAGGAGTGGGATCAAATCTACCCTAATTCTGGAGGATTATTTGGGTTCACGTTCATGTAAACTTTATGGGGGTTGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:6833:7013:D YP_001933014.1|Treponema_pallidum_SS14_uid58977|TPASS_0006 NC_010741.1 upstream YP_001933015.1 D 7968 7990 ATTTAAATGCACAGGCATTTACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:7968:7990:D YP_001933015.1|Treponema_pallidum_SS14_uid58977|TPASS_0008 NC_010741.1 upstream YP_001933016.1 D 9837 10236 TATGCAGATTCGACCGAGTTTTCGGTGGACAAAGCGTCAGCGAGAAAAAGAGAGTACTGGAACTCCTAAAACCGTGTCTGCGATGACGGAAGCGATGATTGGGGTTCTCTCGCACAGTGCCGGTTGCCCCAAGCGGTGCTACGGGTGGCACGAAGTTCGCCTTCGCGCCTAAGTTAATGCCCCAAGTAAGACGAGTACTCCCCGAAATGGTGACGGCCGGGCTCGCGTGCAGACGCGATACGGTAGCGCGCCCTCGGAGTAAAAGTATAAAAATGCACGAGCCTAACACTAGACGCATGCATACAGTAGTGTACCGTGTTTTCACCACAGTTTAGTACAACGATGTCATGTGTCAGATCTAGCAGTATCTGTAATGTATGTTGGTGTACATTAGATATTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:9837:10236:D YP_001933016.1|Treponema_pallidum_SS14_uid58977|TPASS_0010 NC_010741.1 upstream YP_001933017.1 D 10363 10395 TCGTGTTTATGAAAGGGTCATAATGGCTGCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:10363:10395:D YP_001933017.1|Treponema_pallidum_SS14_uid58977|tprB NC_010741.1 upstream YP_001933018.1 D 12372 12371 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:12372:12371:D YP_001933018.1|Treponema_pallidum_SS14_uid58977|TPASS_0012 NC_010741.1 upstream YP_001933019.1 D 12542 12541 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:12542:12541:D YP_001933019.1|Treponema_pallidum_SS14_uid58977|TPASS_0013 NC_010741.1 upstream YP_001933020.1 D 13164 13163 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:13164:13163:D YP_001933020.1|Treponema_pallidum_SS14_uid58977|TPASS_0014 NC_010741.1 upstream YP_001933021.1 D 13773 13962 GCTCATGCCTTTGTGCGCACGGTACTTATGCCGTGCGCATATGAGCGCTCAGTTTAAGAGTGTTACGCGTATTATGACTAAAGTGTAGAGCACGTGTGCCGTGTAGTGGCATCCTCTGCAAAGACGGTGTGGTGGCTGGCCCTTGTGGTGTCCTTTTTTTGACCGTATACTGAGCACGGTCGGAGGGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:13773:13962:D YP_001933021.1|Treponema_pallidum_SS14_uid58977|pheT NC_010741.1 upstream YP_001933022.1 D 15740 15739 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:15740:15739:D YP_001933022.1|Treponema_pallidum_SS14_uid58977|lon1 NC_010741.1 upstream YP_001933023.1 D 18314 18400 CTCGTGTTTATTTACATAGCGTTGGTTTTGTTTTTGAAAAAGTACTTTCGTTGACGTGGCGCTTTGATACCGATACAATATCCCGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:18314:18400:D YP_001933023.1|Treponema_pallidum_SS14_uid58977|TPASS_0017 NC_010741.1 upstream YP_001933024.1 D 19349 19414 AAGTGAGGGTGAAGTAATGTCAGAACACATAGAACACGACGTTCGGGAAATGCTCAATGAAGAAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:19349:19414:D YP_001933024.1|Treponema_pallidum_SS14_uid58977|TPASS_0018 NC_010741.1 upstream YP_001933025.1 D 21389 21554 TCATTTGCTAGAACACTTCATGCTTTCGCACGATGTGGGAACTACTACCCGTCTTTACACGTTAATAAGTGATATCCAGGGGCTTGATCCAAAGTTAAAGGTCCATTTGCGCAATAAAATTATTGAGAAGTACAAGGATTTTAAGTTTTTTGATACTGAGGAACGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:21389:21554:D YP_001933025.1|Treponema_pallidum_SS14_uid58977|greA NC_010741.1 upstream YP_001933026.1 D 22043 22042 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:22043:22042:D YP_001933026.1|Treponema_pallidum_SS14_uid58977|TPASS_0020 NC_010741.1 upstream YP_001933027.1 D 24942 25103 GGACGCCCTTCCATCCTGCGTGTAAACGTTGCTCCTGTCAAGTCTTTGTACGAGCAGCATAAAAAAGTGGTACGTGTAGAAAACTTCCCTTCTGGGGAGAAGCTCTTAGAGAAGTAGCGTTTTTATGTTACGCTCCCCCTTGTAGCTTGAGTAGGGGAGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24942:25103:D YP_001933027.1|Treponema_pallidum_SS14_uid58977|TPASS_0021 NC_010741.1 upstream YP_001933028.1 D 25325 25324 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:25325:25324:D YP_001933028.1|Treponema_pallidum_SS14_uid58977|TPASS_0022 NC_010741.1 upstream YP_001933029.1 D 27494 27553 GTCTGTTCTGAAGGGGATCCTTTTGTCTCTTGTAAAAAGGAATAGACGAGCGGGTAGGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:27494:27553:D YP_001933029.1|Treponema_pallidum_SS14_uid58977|TPASS_0023 NC_010741.1 upstream YP_001933030.1 D 28886 29064 TGTGATGACGCGCAAAAGCGGCCAAACCCACAGTTGGGTAAATATATTCTTTGCAAATTGTCGACACAACCGTTGACGAGAGGGATCGCAGGTGGAGAGGTGTCGTGCCGGGGATATGTTGACACGTCCGTACTCCTCAGTTTGTGAGGCTCCAGTTATAGGAGGGGGGATAGCTACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:28886:29064:D YP_001933030.1|Treponema_pallidum_SS14_uid58977|TPASS_0024 NC_010741.1 upstream YP_001933031.1 R 32926 32953 CTTGCAAGAAGAGGAGTGAGAATCACCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:32926:32953:R YP_001933031.1|Treponema_pallidum_SS14_uid58977|TPASS_0025 NC_010741.1 upstream YP_001933032.1 R 33977 34201 CAGCAGCACTACCAACACACCGAACGCAGCGGAAACGGAAAGAACACTCACACGTAATTCCCCCGAAGGGCTAAAACACCAGAACCGAAGAGACAACGCCATACATCCTTGGACCCCTCCCCGCTGGGGGGGGGCACCTTTTAAGGTGCTCACGCCCTTGTGTCAAGAGCACACCCTCCACTACAATGAACTGCGTGTCCGGAGACCGCGCGGAGTCCTCTTTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:33977:34201:R YP_001933032.1|Treponema_pallidum_SS14_uid58977|fliG1 NC_010741.1 upstream YP_001933033.1 D 33977 34201 AGAAAGAGGACTCCGCGCGGTCTCCGGACACGCAGTTCATTGTAGTGGAGGGTGTGCTCTTGACACAAGGGCGTGAGCACCTTAAAAGGTGCCCCCCCCCAGCGGGGAGGGGTCCAAGGATGTATGGCGTTGTCTCTTCGGTTCTGGTGTTTTAGCCCTTCGGGGGAATTACGTGTGAGTGTTCTTTCCGTTTCCGCTGCGTTCGGTGTGTTGGTAGTGCTGCTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:33977:34201:D YP_001933033.1|Treponema_pallidum_SS14_uid58977|TPASS_0027 NC_010741.1 upstream YP_001933034.1 D 35426 35438 TAGGGAAGCGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:35426:35438:D YP_001933034.1|Treponema_pallidum_SS14_uid58977|TPASS_0028 NC_010741.1 upstream YP_001933035.1 D 36801 36907 CGCCTAAGTAAGTACACAGGATGGGGCCGTACTTTTGCGGTATTCGTGCAATTAAGTTGTATGTTGATCGGTGTTCTACAGGAATGTGTGCGCAAAGGGGTGAGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:36801:36907:D YP_001933035.1|Treponema_pallidum_SS14_uid58977|murA NC_010741.1 upstream YP_001933036.1 D 38186 38303 TCGTATTATGCGGTAATTTGATGAAAAGATGTGAAGTGTTGCCAAGAATCTTTTTTTTTAGTACCCTCGGGGACCGTTACATATGAGGTGTTAACCTTACATTTAAGGAGTGAGAAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:38186:38303:D YP_001933036.1|Treponema_pallidum_SS14_uid58977|groEL NC_010741.1 upstream YP_001933037.1 D 39939 40001 TCTAGTTAGCGCCGGTCGATTGGTCATACGTAAGGGCATGATCTCTTGAGATGAGCGTCTCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:39939:40001:D YP_001933037.1|Treponema_pallidum_SS14_uid58977|TPASS_0031 NC_010741.1 upstream YP_001933038.1 R 41078 41077 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:41078:41077:R YP_001933038.1|Treponema_pallidum_SS14_uid58977|TPASS_0032 NC_010741.1 upstream YP_001933039.1 R 41686 41785 CAACCGCTTTGCACATTATGCGTTTTTCTGTACACTCACCGCCATGTACTCTTGCTTAAGGAGGCTTTTTGGCATACGGGGCACGGGGACTCTGTGTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:41686:41785:R YP_001933039.1|Treponema_pallidum_SS14_uid58977|TPASS_0033 NC_010741.1 upstream YP_001933040.1 R 42737 42933 GGTTATACTCTATTTTTATGAATGCAACACTACTGTCTCTGAGAAAAAAGAGACCACAGCTGCACAATGCAAATTGTCTCTCTACCATGGTTTTCGAAGAAATTCCCGTTCAACATCCTAAAAAGGAATTGCATATTTTGCAGAGAGTGTGCGAGTACGCGCCCGTTTGGGGTGGAAGCCCCTTCAAAGGAGCCATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:42737:42933:R YP_001933040.1|Treponema_pallidum_SS14_uid58977|TPASS_0034 NC_010741.1 upstream YP_001933041.1 D 42737 42933 GATGGCTCCTTTGAAGGGGCTTCCACCCCAAACGGGCGCGTACTCGCACACTCTCTGCAAAATATGCAATTCCTTTTTAGGATGTTGAACGGGAATTTCTTCGAAAACCATGGTAGAGAGACAATTTGCATTGTGCAGCTGTGGTCTCTTTTTTCTCAGAGACAGTAGTGTTGCATTCATAAAAATAGAGTATAACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:42737:42933:D YP_001933041.1|Treponema_pallidum_SS14_uid58977|TPASS_0035 NC_010741.1 upstream YP_001933042.1 D 43650 43649 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:43650:43649:D YP_001933042.1|Treponema_pallidum_SS14_uid58977|TPASS_0036 NC_010741.1 upstream YP_001933043.1 R 45555 45650 ATATCCTATATGTTATGTGTTTCCGCCCAGGTCCTGCGTGAGATACGTGCAGAACGTGGGTAAGGAATGTTGTTTGCCTTACCAAGGAGGTGCGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:45555:45650:R YP_001933043.1|Treponema_pallidum_SS14_uid58977|TPASS_0037 NC_010741.1 upstream YP_001933044.1 R 46704 46751 ACTGGCTGCAGTCCGCGCCATTTTAAGTCTCTCCGTAAGGAGCGTCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:46704:46751:R YP_001933044.1|Treponema_pallidum_SS14_uid58977|pfoS/R NC_010741.1 upstream YP_001933045.1 D 46704 46751 GAGACGCTCCTTACGGAGAGACTTAAAATGGCGCGGACTGCAGCCAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:46704:46751:D YP_001933045.1|Treponema_pallidum_SS14_uid58977|TPASS_0039 NC_010741.1 upstream YP_001933046.1 D 47188 47587 GACCGTTCCCTCCCTGTGGACCAAACCGCGGGGCGCGGTTCAGATACCCGCTATTCAGGCGTATCCTCACTACGGATGTGCCACCTATACGCTGAAAATCTTGCTTCCCCCTCGCGCTCCGTCGCTTGCGCTGTCCTGCGATACGCTTAACTACGCAGCAAGAATCTACGCAAACGGGCATCTCTTAACAGAACTTGGTACCGTTGCGCGTAACCGAGCAGATGCCGTCCCCTACGTCCACCCTGCCGAAGTGTGGTTGCCAACGCACGAACCTGAAATTGACGTGTGCATTCAGGTAAGCAATTACCACAGTCTAAGACCGGGCATTGTTGGTGAAGTTCACTTGGGGTCTGTTTCGCGCGTTCGTACGCGCGTGCTGCGCAAGGACGTGCTTGAGGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:47188:47587:D YP_001933046.1|Treponema_pallidum_SS14_uid58977|mcp1 NC_010741.1 upstream YP_001933047.1 D 49382 49382 C Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:49382:49382:D YP_001933047.1|Treponema_pallidum_SS14_uid58977|TPASS_0041 NC_010741.1 upstream YP_001933048.1 D 49502 49501 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:49502:49501:D YP_001933048.1|Treponema_pallidum_SS14_uid58977|TPASS_0042 NC_010741.1 upstream YP_001933049.1 D 50415 50414 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:50415:50414:D YP_001933049.1|Treponema_pallidum_SS14_uid58977|TPASS_0043 NC_010741.1 upstream YP_001933050.1 D 52548 52586 TTGAAGCCTTTTGCACCTTTCTTCTATAATCCGCTGCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:52548:52586:D YP_001933050.1|Treponema_pallidum_SS14_uid58977|gidA NC_010741.1 upstream YP_001933051.1 R 55435 55795 TCGTTACACACGTAGCCTGTGTGGCGCACCTAAGTCGCTGCACCCACTCGTAACACCACACTCACATGTGCAGTGTGTTCGCGTGTACAACCGATGTGAGCGTGGTGGGGTTTGTTAGCAAGGGGACGTTGATCTGTTCGTGCTGCTGATTGTCTTTGTCCCGTCGTATAGAACACACTCGCAGGTTTCCCTGCCCAATACCATTACTTAGCCCACCTCCTCTAGGAAATTTTCGTAAATGCAGAACGTTTGGTAATACTTGATTTTTTATAAGTCTCCATTGAATATAGGAAACGAGTATACCCGTTAAAAGCATAGCATTGCTCGACATTATCTATTGTTTTACGCAAGAGGATGCAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:55435:55795:R YP_001933051.1|Treponema_pallidum_SS14_uid58977|TPASS_0045 NC_010741.1 upstream YP_001933052.1 R 56498 56514 CACTAAGGAAACTTATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:56498:56514:R YP_001933052.1|Treponema_pallidum_SS14_uid58977|TPASS_0046 NC_010741.1 upstream YP_001933053.1 R 57037 57041 AGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:57037:57041:R YP_001933053.1|Treponema_pallidum_SS14_uid58977|TPASS_0047 NC_010741.1 upstream YP_001933054.1 R 57474 57494 TGTCTCAACAGGATGGAATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:57474:57494:R YP_001933054.1|Treponema_pallidum_SS14_uid58977|TPASS_0048 NC_010741.1 upstream YP_001933055.1 R 58524 58815 CAGCACGGAAAAGTCCTCCCGCTTTTCCCTCAGCGCGGGGGCCAAGCCAGTGCTCGCTCCTGGCCAGGGTTGGGGCTCGTGTGCCCTCTTGGTCCTCTTTAAAGAAAAGAGCAAGTAGAACCGAAGCTTGGGTTGGGTGCCCGCGTCCTCGTGCTCAGACCGTCCCGTAGTTCCACGGTTTGACAGTATCTAACCGCGGTGATACCGTTTTCCCCGGAGAGGTCTTGCGCATGGCACGCATCCGAAGATACAAGCGTATTGAGTACGCGTTCGTTCGTTTTTGTATTGACCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:58524:58815:R YP_001933055.1|Treponema_pallidum_SS14_uid58977|TPASS_0049 NC_010741.1 upstream YP_001933056.1 R 59425 59574 GGGGGCCCTCGCGCAGGAGCATAAAATATTCAGGCGAAGCTTTCAACAAAGACAGTTCCAGGCCACGACACGAATAGAAAAAGAGCTTGCCATGATGCTAAAAAAGCATTAGATGTAGGGTGTTTTCGTGCTCGTGCAGGAGAGGCTAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:59425:59574:R YP_001933056.1|Treponema_pallidum_SS14_uid58977|TPASS_0050 NC_010741.1 upstream YP_001933057.1 D 59425 59574 GTTAGCCTCTCCTGCACGAGCACGAAAACACCCTACATCTAATGCTTTTTTAGCATCATGGCAAGCTCTTTTTCTATTCGTGTCGTGGCCTGGAACTGTCTTTGTTGAAAGCTTCGCCTGAATATTTTATGCTCCTGCGCGAGGGCCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:59425:59574:D YP_001933057.1|Treponema_pallidum_SS14_uid58977|prfA NC_010741.1 upstream YP_001933058.1 D 60600 60599 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:60600:60599:D YP_001933058.1|Treponema_pallidum_SS14_uid58977|hemK NC_010741.1 upstream YP_001933059.1 R 62791 62960 AACGGATTTCCTACGTCTCTGTTAGGTTTCCCCAAACCTACCCACAAAACAGGGACCACCACACAAGACACAGAGCCCTGCAGACAGACATTTTTACGCCCGCCGCAATTGAGAATTCAAAGTCCATCAAGTATACTACCCTGTGCCCGCACTCAGGAGGAGGTTTCATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:62791:62960:R YP_001933059.1|Treponema_pallidum_SS14_uid58977|nrdF NC_010741.1 upstream YP_001933060.1 D 62791 62960 GATGAAACCTCCTCCTGAGTGCGGGCACAGGGTAGTATACTTGATGGACTTTGAATTCTCAATTGCGGCGGGCGTAAAAATGTCTGTCTGCAGGGCTCTGTGTCTTGTGTGGTGGTCCCTGTTTTGTGGGTAGGTTTGGGGAAACCTAACAGAGACGTAGGAAATCCGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:62791:62960:D YP_001933060.1|Treponema_pallidum_SS14_uid58977|TPASS_0054 NC_010741.1 upstream YP_001933061.1 D 63921 64126 GAGTAGGGAAAGTAGACGGGTGTGAGGTATGGAACCTACAGCGCAATTGGTTTTGCAGTGCGTGTTGACGTGCGTCCGCGTGTGCCTCTGAGAACGCAGCCTGCTCTGTTGTCGCGTAGGAAAACTTGTAAAGAGCTTGCACAAAGCGTCTTTTTTTTTTACCCTCGACCCCGTTCGCCTGAATTCATCACGTAGGAGTTGCCCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:63921:64126:D YP_001933061.1|Treponema_pallidum_SS14_uid58977|TPASS_0055 NC_010741.1 upstream YP_001933062.1 D 64360 64359 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:64360:64359:D YP_001933062.1|Treponema_pallidum_SS14_uid58977|oadA NC_010741.1 upstream YP_001933063.1 D 66142 66152 AGGATGTGACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:66142:66152:D YP_001933063.1|Treponema_pallidum_SS14_uid58977|oadB NC_010741.1 upstream YP_001933064.1 R 68954 68953 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:68954:68953:R YP_001933064.1|Treponema_pallidum_SS14_uid58977|dnaB NC_010741.1 upstream YP_001933065.1 R 69165 69169 ACCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:69165:69169:R YP_001933065.1|Treponema_pallidum_SS14_uid58977|TPASS_0059 NC_010741.1 upstream YP_001933066.1 R 69641 69745 CGCTGGTATACAGCGGTTGTTTTTCCTAGTTCAGTAGAAGTTGCTGTGCATAGGCAGAGTGGCTCTGCGTGGACTTTTATTCCTGCGTAGGAGGGGACAAAACGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:69641:69745:R YP_001933066.1|Treponema_pallidum_SS14_uid58977|rplI NC_010741.1 upstream YP_001933067.1 R 70046 70161 GTCTCTTTCCCCACAAGGAGCATGCATAATGAATAAAAGTATGACCGAACCTGGCGTTCGCCTGGACCTCAGAAAGGAATTGGGCGTGCTAATTTTTCCACTTCTAGGAGCATATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:70046:70161:R YP_001933067.1|Treponema_pallidum_SS14_uid58977|rpsR NC_010741.1 upstream YP_001933068.1 R 70693 70700 GAGAAGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:70693:70700:R YP_001933068.1|Treponema_pallidum_SS14_uid58977|ssb NC_010741.1 upstream YP_001933069.1 R 70983 71123 CGGATAAAAGGACAAAAGACTTGATGCGGCACACAGATTTACGCTACGCTGGCGTCTCGCCGCGCGTTCTGCGCACGCTACTCCTCCTTGTCGGGTGAGTCTAGTGCAGCCTGATAAGGTGAGCCGTCCATAGGAGTTATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:70983:71123:R YP_001933069.1|Treponema_pallidum_SS14_uid58977|rpsF NC_010741.1 upstream YP_001933070.1 D 70983 71123 AATAACTCCTATGGACGGCTCACCTTATCAGGCTGCACTAGACTCACCCGACAAGGAGGAGTAGCGTGCGCAGAACGCGCGGCGAGACGCCAGCGTAGCGTAAATCTGTGTGCCGCATCAAGTCTTTTGTCCTTTTATCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:70983:71123:D YP_001933070.1|Treponema_pallidum_SS14_uid58977|TPASS_0064 NC_010741.1 upstream YP_001933071.1 D 71700 71772 GTAATCCGCTTGCTTGTTACAAGGCGCGACGTTTTGTGTACGGAGGTTGGCACGGGTGAGGATTACGGGGGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:71700:71772:D YP_001933071.1|Treponema_pallidum_SS14_uid58977|TPASS_0065 NC_010741.1 upstream YP_001933072.1 D 72344 72343 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:72344:72343:D YP_001933072.1|Treponema_pallidum_SS14_uid58977|TPASS_0066 NC_010741.1 upstream YP_001933073.1 D 72646 72645 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:72646:72645:D YP_001933073.1|Treponema_pallidum_SS14_uid58977|TPASS_0067 NC_010741.1 upstream YP_001933074.1 D 73828 74007 TTTCCCCCCTTTTTCTTCCTGGTAAGCTTGGGTATGGGTGGCGTTTGCCAAGTGTGAACGGCTCGTTGCGCAGGTGTGGCTGCGCGATGCCTGTCGATTCGGCGCTTTTTGTGTGGTGGTCGGGGTCCTCCTCTTCGTCGGAGGTGGTGCAGGACTTTGCGACGAGGGGGTGGAGCGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:73828:74007:D YP_001933074.1|Treponema_pallidum_SS14_uid58977|TPASS_0068 NC_010741.1 upstream YP_001933075.1 R 75617 75616 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:75617:75616:R YP_001933075.1|Treponema_pallidum_SS14_uid58977|TPASS_0069 NC_010741.1 upstream YP_001933076.1 R 75853 75902 GTGCATATTCAAATATGGCAATGTCATGCCACATGTAAGAGGAGACCATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:75853:75902:R YP_001933076.1|Treponema_pallidum_SS14_uid58977|TPASS_0070 NC_010741.1 upstream YP_001933077.1 R 78540 78742 ATTCCCAACCTCCCAACTCGCAGGAGCCTACTTCAAAACAAGAAAATATAAAAGGCTACGCCTTACCGCGGCCTGCCAAAGCGCACCGCATACCATGTACACCCCTGTTCTCCACCGCGACTACTCCCGTAAGTCCCCTGCAAGCGGTAGAAAAAACATACCGATGACGAGAAAAAAGCGTTCAAAAGACCTATAATCACGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:78540:78742:R YP_001933077.1|Treponema_pallidum_SS14_uid58977|clpB NC_010741.1 upstream YP_001933078.1 D 78540 78742 GGCGTGATTATAGGTCTTTTGAACGCTTTTTTCTCGTCATCGGTATGTTTTTTCTACCGCTTGCAGGGGACTTACGGGAGTAGTCGCGGTGGAGAACAGGGGTGTACATGGTATGCGGTGCGCTTTGGCAGGCCGCGGTAAGGCGTAGCCTTTTATATTTTCTTGTTTTGAAGTAGGCTCCTGCGAGTTGGGAGGTTGGGAAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:78540:78742:D YP_001933078.1|Treponema_pallidum_SS14_uid58977|TPASS_0072 NC_010741.1 upstream YP_001933079.1 R 80627 80930 CCTGTCCGTTTTTCCCCTCACACCCCAGTCCTGATACATCAAACCAGCACGACACATAGCACCACACCAATCGACGCACGCCCCTACGCAGTCCTACAAAATCTTGCGACCTCAGTCGAGAAGGAGCGTATCCACCGCGCGCATCGCACCCCATATCGATACGGGAAAACAAAGATTACATGAGCACGTACAGTTTGCTCCCCCTTCAACCTAACGGGGCAGATTCTCGTACGCTTTTCTCCCCGTTGTCAACAAAGACATACACCGCACCCACACGCGTTTGCATTCTGGCACAGGGAAAGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:80627:80930:R YP_001933079.1|Treponema_pallidum_SS14_uid58977|TPASS_0073 NC_010741.1 upstream YP_001933080.1 D 80627 80930 AGCTTTCCCTGTGCCAGAATGCAAACGCGTGTGGGTGCGGTGTATGTCTTTGTTGACAACGGGGAGAAAAGCGTACGAGAATCTGCCCCGTTAGGTTGAAGGGGGAGCAAACTGTACGTGCTCATGTAATCTTTGTTTTCCCGTATCGATATGGGGTGCGATGCGCGCGGTGGATACGCTCCTTCTCGACTGAGGTCGCAAGATTTTGTAGGACTGCGTAGGGGCGTGCGTCGATTGGTGTGGTGCTATGTGTCGTGCTGGTTTGATGTATCAGGACTGGGGTGTGAGGGGAAAAACGGACAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:80627:80930:D YP_001933080.1|Treponema_pallidum_SS14_uid58977|y4oP NC_010741.1 upstream YP_001933081.1 D 82341 82458 AAAGTCTCTTCTTCTTGGGGGAAGAGAGGGCAGAAAAGATGCTGGATATGAGCGGAAACAGAATGACGTGTTCTATCTGTGGAGCGCGTTACGTTGGGTAGCGTAAGAGGGGGAGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:82341:82458:D YP_001933081.1|Treponema_pallidum_SS14_uid58977|y4oQ NC_010741.1 upstream YP_001933082.1 D 83350 83388 GGGTTGCGTACGGGTTAGATAAGAGCAGGAGCAGATAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:83350:83388:D YP_001933082.1|Treponema_pallidum_SS14_uid58977|y4oR NC_010741.1 upstream YP_001933083.1 D 84211 84250 AGGGATAAACACTCTGCGCGGGTGAGTACGTGCAGCAGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:84211:84250:D YP_001933083.1|Treponema_pallidum_SS14_uid58977|cap NC_010741.1 upstream YP_001933084.1 D 85868 85871 GAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:85868:85871:D YP_001933084.1|Treponema_pallidum_SS14_uid58977|spsC NC_010741.1 upstream YP_001933085.1 D 87038 87037 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:87038:87037:D YP_001933085.1|Treponema_pallidum_SS14_uid58977|TPASS_0079 NC_010741.1 upstream YP_001933086.1 D 89257 89256 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:89257:89256:D YP_001933086.1|Treponema_pallidum_SS14_uid58977|TPASS_0080 NC_010741.1 upstream YP_001933087.1 D 89725 89730 AACTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:89725:89730:D YP_001933087.1|Treponema_pallidum_SS14_uid58977|TPASS_0081 NC_010741.1 upstream YP_001933088.1 R 92429 92828 GGCTTACCCGTTTCATCAGGAAAATCGAGCACCGCGACCGCCTTAATCCCACTGCTGTTTGCATTACAGCCCAGATTTTGCCAAGTCCGTCCCCCATTTTTGCTGAGAAACACTGCGTCATTGGTAGCGGTAACCAAAACCGCTCCGTTATCCGGATGTACCTCAAGATCTTTCAATGGCTGCGGCTGAGACACAAAAACCTTTTCCCGATCGACTATCTTCTTCACTACCTTCTTTGGTAGTTGCTCACCCACGTGCGCGAAAGTCCTTAAGTCGCGCGAGGTCATGACACCTCGAGACGTAAGCAAGAACCAGTTCTCTCCCGCAGCAATAATCTTGCTAACCGAAACGCCAGAGAGCAGTACGTCTTGAGCGTAAGGAGTAATACGGTACAATCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:92429:92828:R YP_001933088.1|Treponema_pallidum_SS14_uid58977|fhlA NC_010741.1 upstream YP_001933089.1 D 92774 93173 GCAGTGGGATTAAGGCGGTCGCGGTGCTCGATTTTCCTGATGAAACGGGTAAGCCAGTGCTTACCGTGTTTGTTTCGCATTCCCTGCGTGGTATTGCGTGGATGCAGCCAGAGAAAGGTCGTTTTTGGACTGATATTAGCGCTACGCTTGCGCTTGGTCCTGAAGCCACTGAAGAAATCTCAGACATTGCGGTGCGCAGGAGCGTGCATGGCAATGAGCTTTTTGCAAGCTACACGTTCGTGCCCAAGATCGTACGCCTTAACTGGGCCAAAAAACGCTTTCAGGACGTACGTGTGTGGACGGCTGCGCTGAAAGATGCGCGCTGCATTGATGGATTGAGTGCGTCTGTCGTTCGCTCGTTGGGTGTCGGGATGGTAGTTTGTTTGAGATCCCCCTCATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:92774:93173:D YP_001933089.1|Treponema_pallidum_SS14_uid58977|TPASS_0083 NC_010741.1 upstream YP_001933090.1 R 94668 94780 CGGTCTTTTGCGTGTGCTGTGCGCCGAGTTGACTGAACTCGCGTAGCTTGTGCGGTATCGGTGCAGGGGGGGGGTGGTAAGCCCCAGACTGACGGAAACGGAGGGAGTTTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:94668:94780:R YP_001933090.1|Treponema_pallidum_SS14_uid58977|TPASS_0084 NC_010741.1 upstream YP_001933091.1 R 95228 95307 GATATCCTGGGAGCGGAAAGAGCGTGGGGAGCTTTTCCAAAAAGCTTGACTTTTCCTTTGAGAGTTTTTAGCTTGGGGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:95228:95307:R YP_001933091.1|Treponema_pallidum_SS14_uid58977|ptsN1 NC_010741.1 upstream YP_001933092.1 D 95228 95307 TCCCCCAAGCTAAAAACTCTCAAAGGAAAAGTCAAGCTTTTTGGAAAAGCTCCCCACGCTCTTTCCGCTCCCAGGATATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:95228:95307:D YP_001933092.1|Treponema_pallidum_SS14_uid58977|TPASS_0086 NC_010741.1 upstream YP_001933093.1 R 96795 96794 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:96795:96794:R YP_001933093.1|Treponema_pallidum_SS14_uid58977|TPASS_0087 NC_010741.1 upstream YP_001933094.1 R 97393 97421 ATGTATCCACACAAGGAGAGGAAAACGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:97393:97421:R YP_001933094.1|Treponema_pallidum_SS14_uid58977|TPASS_0088 NC_010741.1 upstream YP_001933095.1 R 98658 98739 GGCGGGCACCTGTGCACTGCAAGACGTACGGGTTGTCTTGTAAACAGAGCATAGAGCGACGATTAGGAAGGAGTGGGATACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:98658:98739:R YP_001933095.1|Treponema_pallidum_SS14_uid58977|TPASS_0089 NC_010741.1 upstream YP_001933096.1 R 99805 99985 GTGCGCCCCTTCGAAGTTTCTCCCAACCGGGCGCAGAACACGTGCGGACCACGCCCAGCCCCATTGTCGCGCAAACGCCTTTGCCCGCCTGCGCTTCAGTCTACCCTCCCTCGAAACGCAAAGAAGGCCAAGACCGCGCCATTGTAGCATAAGCGCGTGAAATCGTATATGTTTTCTGTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:99805:99985:R YP_001933096.1|Treponema_pallidum_SS14_uid58977|murB NC_010741.1 upstream YP_001933097.1 D 99805 99985 GGACAGAAAACATATACGATTTCACGCGCTTATGCTACAATGGCGCGGTCTTGGCCTTCTTTGCGTTTCGAGGGAGGGTAGACTGAAGCGCAGGCGGGCAAAGGCGTTTGCGCGACAATGGGGCTGGGCGTGGTCCGCACGTGTTCTGCGCCCGGTTGGGAGAAACTTCGAAGGGGCGCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:99805:99985:D YP_001933097.1|Treponema_pallidum_SS14_uid58977|cysS NC_010741.1 upstream YP_001933098.1 D 101549 101618 CATTTTGGGAGATACATTGTTGCATGAGCAGGAGCTTTTAAGAGCACAGGATGATGCAGATTTTAAGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:101549:101618:D YP_001933098.1|Treponema_pallidum_SS14_uid58977|rpoE NC_010741.1 upstream YP_001933099.1 D 102091 102090 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:102091:102090:D YP_001933099.1|Treponema_pallidum_SS14_uid58977|TPASS_0093 NC_010741.1 upstream YP_001933100.1 D 102739 102875 TCCAGGCAAATGTGTAGTAAAAATAATGCGCCCGCGCGGACGTGTTTCCTGTTCTTTTCAAACCGTTCTGATCGTTGGGTGTTCCTGTCTGCAAACTTGATTGACCTGCTTGTCAGGTAGCCATAAGGAGAATGTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:102739:102875:D YP_001933100.1|Treponema_pallidum_SS14_uid58977|pta NC_010741.1 upstream YP_001933101.1 D 103886 103885 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:103886:103885:D YP_001933101.1|Treponema_pallidum_SS14_uid58977|TPASS_0095 NC_010741.1 upstream YP_001933102.1 R 106269 106437 TGACCCTCCACGTGCACCGGACGCAACCTGCCGGGCAGAACATTGCCTTTTCCCTCCATCGTCCGTATAATGGACGGAGCGGTCCYTCCAGCAGTCTACGCTCTAGGTCGGGTGCTGTCAATCAGACTGGTGGGTGCCGGGTACGTTGTACCGCATACAGGAGTGTCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:106269:106437:R YP_001933102.1|Treponema_pallidum_SS14_uid58977|TPASS_0096 NC_010741.1 upstream YP_001933103.1 D 106269 106437 CTGACACTCCTGTATGCGGTACAACGTACCCGGCACCCACCAGTCTGATTGACAGCACCCGACCTAGAGCGTAGACTGCTGGARGGACCGCTCCGTCCATTATACGGACGATGGAGGGAAAAGGCAATGTTCTGCCCGGCAGGTTGCGTCCGGTGCACGTGGAGGGTCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:106269:106437:D YP_001933103.1|Treponema_pallidum_SS14_uid58977|infA NC_010741.1 upstream YP_001933104.1 R 107367 107369 ACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:107367:107369:R YP_001933104.1|Treponema_pallidum_SS14_uid58977|TPASS_0098 NC_010741.1 upstream YP_001933105.1 R 108126 108319 GCACAGAGAACACTCACTAGACTACGGAGATACAGTTTTTACGTCGGTTTTTGCACAGAATACAAGAACTAGGAGTCTGTGTCGCCCGTGTAGAACACTCCATCGCCCCGTGCACGCTGGGACGCAATGCCAGATACACACAGGGCCTGGATCCAAAGGGTCTCTTTGCGTTACGATGCCGGCGAGAGGGTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:108126:108319:R YP_001933105.1|Treponema_pallidum_SS14_uid58977|pyrH NC_010741.1 upstream YP_001933106.1 D 108126 108319 GAAACCCTCTCGCCGGCATCGTAACGCAAAGAGACCCTTTGGATCCAGGCCCTGTGTGTATCTGGCATTGCGTCCCAGCGTGCACGGGGCGATGGAGTGTTCTACACGGGCGACACAGACTCCTAGTTCTTGTATTCTGTGCAAAAACCGACGTAAAAACTGTATCTCCGTAGTCTAGTGAGTGTTCTCTGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:108126:108319:D YP_001933106.1|Treponema_pallidum_SS14_uid58977|TPASS_0100 NC_010741.1 upstream YP_001933107.1 D 108915 108914 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:108915:108914:D YP_001933107.1|Treponema_pallidum_SS14_uid58977|ccdA NC_010741.1 upstream YP_001933108.1 R 111721 111784 AGTCTATGCCCTTCCACATACGGATATTCTTTTTTCCGCCCTATTTTGCTACGCTTGTGCGTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:111721:111784:R YP_001933108.1|Treponema_pallidum_SS14_uid58977|rep NC_010741.1 upstream YP_001933109.1 D 111721 111784 AGACGCACAAGCGTAGCAAAATAGGGCGGAAAAAAGAATATCCGTATGTGGAAGGGCATAGACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:111721:111784:D YP_001933109.1|Treponema_pallidum_SS14_uid58977|TPASS_0103 NC_010741.1 upstream YP_001933110.1 D 113609 113854 CGATTCTGCGAGCAAATCGTATCTGCAGGAAAGCAAGAAGGATGGCGAGAACATACAGTTGCCTTGTATATTCCGCGAGTTACGCGCATTTTTATGGCCGAGTGGTTAGCATTACTTCTACAGGTTTTTTATGCAATTTTATATACTGAGCCGTCGTTCATGTGTCTCCGATACGGTGTGGTCTAGGTTCCGTACCGTGCGGGCACGGAACACATCGAGCGGACGCGTCTGTTCGTGGAGGATATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:113609:113854:D YP_001933110.1|Treponema_pallidum_SS14_uid58977|ushA NC_010741.1 upstream YP_001933111.1 D 115637 115802 TAGGAAGTAACTTACATTAGAGGCCTGTAAAGAACTACGTTCTTTACAGGCTGTGCCAATCTGCTTTTCCGGGAAAGACAAAGGGTATGCCACGTTAGGAGCGGAAAGAAGGGTGCTGCACATAACCTTATCTTTGCGATTGACCGTGGTATACTCCTTGCACCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:115637:115802:D YP_001933111.1|Treponema_pallidum_SS14_uid58977|polA NC_010741.1 upstream YP_001933112.1 R 120361 120360 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:120361:120360:R YP_001933112.1|Treponema_pallidum_SS14_uid58977|TPASS_0106 NC_010741.1 upstream YP_001933113.1 R 121919 122271 GAGAGCGAAGGATGCGCTCCTCACAGCTGTGTGCAGGAAGCGAGCAGGGGGGGGGGTGCTTTTTCCCCTGTTTTTTGCGTGCTTGACGGCGGGCGAACACGCCCGTACACTTCCTCAGTGTGGGGCGTCGTTTTTTCCAGATTTTTCAGCTTTTGCGCGATGCGCCTCGGCTTTGCCAGCGTGACATCGCCAAGGCGTTGCGCCTGTCCTTGGCTTACACCAATCGCCTTCTACACGCTATGGAGTCTGCAGGACTCCTTGAAACCCACGGGACCTTTGGTGCGCGGACGCGTTCTCTCACCCCCCTTGCACATAGTCAGTATCAGTCTTGCCGGGTTCATAATGCGGTAATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:121919:122271:R YP_001933113.1|Treponema_pallidum_SS14_uid58977|licC NC_010741.1 upstream YP_001933114.1 R 123658 123758 AAACACCCAGGGCATCTTCGCATCTTTAATTCATATTGCATCTTTCACCCCATTGCGTTAGCCTGAGGGAGTCTCTACGCACGCGGTACGCGGAGGACCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:123658:123758:R YP_001933114.1|Treponema_pallidum_SS14_uid58977|pfk NC_010741.1 upstream YP_001933115.1 R 124638 124896 GGGAGGCCCAGGCTAGTACGACACGTATTTTCTGTCAAGCAGATAACGAACACTCACTCAGATCAAAAACTTACCCGGTACCTCCACTTGACCGACGCAGACTGGCAGCTGCCATCAGCAGCCCCACAGCACACGCGCATTCCGGCAAAGACACACAACTGCACATTGCCGATACAATTGTGCAGTCGCTCCTTCCAGTCAGTAGCGCTATTGCAAAGCGCGCCTGGCTGCGATACAAGGAGGAGAACACTTACTCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:124638:124896:R YP_001933115.1|Treponema_pallidum_SS14_uid58977|TPASS_0109 NC_010741.1 upstream YP_001933116.1 D 125157 125177 TTGGGGTGTGTATTCCCCTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:125157:125177:D YP_001933116.1|Treponema_pallidum_SS14_uid58977|TPASS_0110 NC_010741.1 upstream YP_001933117.1 D 126912 126970 GCGTTTCGCTCCTTTTCTGTATTCCTTTCGTGGGATTGGTTTGCAGGGCACGTGGTGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:126912:126970:D YP_001933117.1|Treponema_pallidum_SS14_uid58977|rpoN NC_010741.1 upstream YP_001933118.1 R 129748 129888 CACGGCACCTTCCTACACACGCTCGTCTTTTCGCCCATCTTACGGGAAACATTTTCCTGTGACAACACTCACCGTATTCACACAGACTTCGTTGTAGACAGAATAAAAATTCTCACTCAGTATAAAAACACAGGAGGCATG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:129748:129888:R YP_001933118.1|Treponema_pallidum_SS14_uid58977|pepC NC_010741.1 upstream YP_001933119.1 D 129748 129888 CATGCCTCCTGTGTTTTTATACTGAGTGAGAATTTTTATTCTGTCTACAACGAAGTCTGTGTGAATACGGTGAGTGTTGTCACAGGAAAATGTTTCCCGTAAGATGGGCGAAAAGACGAGCGTGTGTAGGAAGGTGCCGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:129748:129888:D YP_001933119.1|Treponema_pallidum_SS14_uid58977|hflK NC_010741.1 upstream YP_001933120.1 D 130876 130879 GGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:130876:130879:D YP_001933120.1|Treponema_pallidum_SS14_uid58977|hflC NC_010741.1 upstream YP_001933121.1 R 132710 132859 GTGCTTCGCAGTATCGGTTATTACCATAGGATTTAAAAAATCTGTAGTACATGCTGTGCCTTTCCCTTTGATTTTGCTCTCTTAGAACCTCTGGTTGACAAACCACACCCATGGTGAATAGAGTGGACCCCGCTTAAGAGGAGGCACGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:132710:132859:R YP_001933121.1|Treponema_pallidum_SS14_uid58977|thiD NC_010741.1 upstream YP_001933122.1 D 132710 132859 AACGTGCCTCCTCTTAAGCGGGGTCCACTCTATTCACCATGGGTGTGGTTTGTCAACCAGAGGTTCTAAGAGAGCAAAATCAAAGGGAAAGGCACAGCATGTACTACAGATTTTTTAAATCCTATGGTAATAACCGATACTGCGAAGCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:132710:132859:D YP_001933122.1|Treponema_pallidum_SS14_uid58977|uvrB NC_010741.1 upstream YP_001933123.1 R 136695 136773 GTGCTCATGAGATAGAGCTCTCCGTGTCTTCTAGACGGGTGGGGGGGGGGTGAGGTAGAAGTGAGAGGAGGGGGAGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:136695:136773:R YP_001933123.1|Treponema_pallidum_SS14_uid58977|tprC NC_010741.1 upstream YP_001933124.1 R 138040 138136 TACCCCGCCAGAGTTAGGCAGGACGTCTGTCCTTGCATGGGTAAAGAGGGAGTGAGGTGCCCTGTACATACGCAGGGGAAGTGTTTACAATGCGGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:138040:138136:R YP_001933124.1|Treponema_pallidum_SS14_uid58977|TPASS_0118 NC_010741.1 upstream YP_001933125.1 R 138797 138796 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:138797:138796:R YP_001933125.1|Treponema_pallidum_SS14_uid58977|yaeE NC_010741.1 upstream YP_001933126.1 R 139606 139734 GGACCACGAGTGCGCATCCTACGGTAAAAATGCATGCGTGTACAAGTCACGCCGTGCACCGCACCCGTGCTGCAGGATCGCATACCGTAGTGTTGACACACGTACCTATTTGCAGAGACCCTGGTCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:139606:139734:R YP_001933126.1|Treponema_pallidum_SS14_uid58977|TPASS_0120 NC_010741.1 upstream YP_001933127.1 D 139606 139734 GGGGACCAGGGTCTCTGCAAATAGGTACGTGTGTCAACACTACGGTATGCGATCCTGCAGCACGGGTGCGGTGCACGGCGTGACTTGTACACGCATGCATTTTTACCGTAGGATGCGCACTCGTGGTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:139606:139734:D YP_001933127.1|Treponema_pallidum_SS14_uid58977|TPASS_0121 NC_010741.1 upstream YP_001933128.1 R 142879 142983 TCGGTTTGAAGAGGTCTTTTTTATTTACCTTTAGCGCGCTATACTTCTGGGGCGATACGTGCCTGGAATACCCGTGCAGCACGCTACGCACCAAGGAGCGGCGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:142879:142983:R YP_001933128.1|Treponema_pallidum_SS14_uid58977|pckA NC_010741.1 upstream YP_001933129.1 D 142879 142983 AACGCCGCTCCTTGGTGCGTAGCGTGCTGCACGGGTATTCCAGGCACGTATCGCCCCAGAAGTATAGCGCGCTAAAGGTAAATAAAAAAGACCTCTTCAAACCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:142879:142983:D YP_001933129.1|Treponema_pallidum_SS14_uid58977|TPASS_0123 NC_010741.1 upstream YP_001933130.1 D 145555 145567 AGCAGGGGGCACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:145555:145567:D YP_001933130.1|Treponema_pallidum_SS14_uid58977|TPASS_0124 NC_010741.1 upstream YP_001933131.1 D 146675 146750 AACACAGGCGCTCCGTTCCGTCTGTGCGCCGTGTGCGATACAGTGAGCCTTGATTCTGCGTTTGAAAGCAGGCACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:146675:146750:D YP_001933131.1|Treponema_pallidum_SS14_uid58977|exoA NC_010741.1 upstream YP_001933132.1 R 148485 148884 AGAACAGCAATGTAGTGATAGAGAAGAACGTGACGGAGCGTTGGCAATTCGTAGGGGCATGTCGCTTGATTTGGTAGAGAACGGCATGCCCGTCTATTACTTCGCAGCCCGAGCCCAACTCCCAGCCGTAGCCCCAGCCAATGACATCTTATGGGACGCAGGCGTACATGCCCGTCCATTGGAACGCCTTCACCCAAGCCCGAGCCCTGCCCGGAGCCCCAGTCCCAGCCATCTACTTCCCGGTTGTAGTTACAATTCCACGCTTTCTGGCGACTATGCCCGAGCCGCAGCCGCAGCCGGGGCTGGAGTCGACATCAACTTCCCGGTGTATGGGGGTGTCTTGCACGCATCGCAGGCTAGTAATGTATTTCAGGGTGTCTTTCTCACCGATACCACACCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:148485:148884:R YP_001933132.1|Treponema_pallidum_SS14_uid58977|TPASS_0126 NC_010741.1 upstream YP_001933133.1 D 149447 149846 GGGCGATACCCACAATATCCTGCCTTCCACTTCGTAAGAGCAGCAGCACCAGGAACTGCACCAGGGACCGCCCCAGGAACTGCACCAGGAGCAGCATCGTTTTTCTTGTTCGTACCGCGCCTGTGTGCCTTTGTGCGCGCAGCGCGTCCCTGCTGCTGGGGCGCCCGTGTTTGACTTGCCCTCCCAGTCGGTGTGAGGCAGGCCGCGTCTATCCCTCAGTGCGCATGTCCTCCCTGCTTGAGGGGTTGGGCGCCACCATTTTCATATGCAATGCCCCAGATGCAGTCGTCCTTCTGCATGGGTGTGGTGAGAAAGACACCCTGAAATACATTGCTCTACTTCGTACCAGGAACTGCAGCAGCAGGGGGAACAGGGACACCCTGGGTGAAAAGACTGCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:149447:149846:D YP_001933133.1|Treponema_pallidum_SS14_uid58977|TPASS_0127 NC_010741.1 upstream YP_001933134.1 D 150329 150728 TGGTGCGTGATCCGGCCCTTACCGCAGATTACCTGCTTTACGGTATGCAAAGCTGTTACGCAATTCCGCTCCATGTGGGGGTTTCGTATTACCTTGCCAAGCGCTGGGGTATTGAGTGTGCGCTTACGGCCTCACTTGGCATTTCAATGCGGACGGATGTGCGCGTCCCCTACGCGGTACGCATAGGGCCGGTATTCCGCGTGTAGGGCCTCCGGTGAGCCGCTCTCCTTCCCATAAGATGGCGTTGTTGGCTGGGGCTGGGGGTCGGGCTCGGGCCAGGGCTTTCCAATGGACGGGCATGTACGTACGGTCCTATGGAACTTCGTTGTGGGCTGCGGCTCCGGGTAGGGCTGGGACTCCGGCTGCGGCTCCGGCTGCTTGGGCATAGCCGCTAGACAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:150329:150728:D YP_001933134.1|Treponema_pallidum_SS14_uid58977|TPASS_0128 NC_010741.1 upstream YP_001933135.1 D 151061 151060 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:151061:151060:D YP_001933135.1|Treponema_pallidum_SS14_uid58977|TPASS_0129 NC_010741.1 upstream YP_001933136.1 R 152286 152356 AAGCGCGTGCACTCCCCGTGCGTTAGCGGCTATGCCACAGCCCGAGCCGGAGCCGACATCAACTTCCCGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:152286:152356:R YP_001933136.1|Treponema_pallidum_SS14_uid58977|TPASS_0130 NC_010741.1 upstream YP_001933137.1 R 154154 154330 TTTTGAAAAATCGAGCAGATTCTCAGTACAAAAAGAGGGTATAGGTGCGCCGGGTTCTGCGCGTACCGCTTTGCAGTTCAAATTGTTTTTGCTTTCCCGCCTCTTTTTTATTTTTACGTCACATATTCCCTAGACGGGTGGGGGGGGGTGAGGTAGAAGTGAGAGGAGGGGGAGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:154154:154330:R YP_001933137.1|Treponema_pallidum_SS14_uid58977|tprD NC_010741.1 upstream YP_001933138.1 R 154409 154408 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:154409:154408:R YP_001933138.1|Treponema_pallidum_SS14_uid58977|TPASS_0132 NC_010741.1 upstream YP_001933139.1 R 155626 155625 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:155626:155625:R YP_001933139.1|Treponema_pallidum_SS14_uid58977|TPASS_0133 NC_010741.1 upstream YP_001933140.1 R 156753 156752 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:156753:156752:R YP_001933140.1|Treponema_pallidum_SS14_uid58977|TPASS_0134 NC_010741.1 upstream YP_001933141.1 R 157646 157788 TGCGTATTGTTTTGGTATGCGACCGCGCGCGACGCACAAGCGCGCCGTGCACGCAGTGCCTGTACCGCCTTCCATGATACCCCGACACTGCGCGGCGCGCAACACGATGTACTGCATTCGGCGGCATGCCCAGGACTCGGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:157646:157788:R YP_001933141.1|Treponema_pallidum_SS14_uid58977|TPASS_0135 NC_010741.1 upstream YP_001933142.1 D 157862 157984 ACATGCAGCCGCGTTTCTGCTATCGGATAAAGGACGACTGGGCTGGCAGCGGGTGTGGGTTCCCACCTCCTGTTCGTGTCTTTTCAGGGTGTGTGCGCGTTCCGAGAAGAGGGCGTTTTGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:157862:157984:D YP_001933142.1|Treponema_pallidum_SS14_uid58977|TPASS_0136 NC_010741.1 upstream YP_001933143.1 D 159442 159441 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:159442:159441:D YP_001933143.1|Treponema_pallidum_SS14_uid58977|TPASS_0137 NC_010741.1 upstream YP_001933144.1 R 160454 160460 GCGTTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:160454:160460:R YP_001933144.1|Treponema_pallidum_SS14_uid58977|TPASS_0138 NC_010741.1 upstream YP_001933145.1 R 161154 161192 TGCGCGTAACGTGTGCATGCGCGACGTGAAAGGAACATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:161154:161192:R YP_001933145.1|Treponema_pallidum_SS14_uid58977|TPASS_0139 NC_010741.1 upstream YP_001933146.1 R 162921 163091 TGCCTGTCTCTCTCCCCCTCCACGAACACAGATATCCTCGTTTTTCAAAGAAAAACTACATCTGATCTTTACGACCTATGTGTTCTTATCGTGTTCGTATATGCGTACGAGCTCGCTCGTGCACCCTCCCTATACAGACAGAGACTTGAGCTCTCCTGAAAAATAGCTATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:162921:163091:R YP_001933146.1|Treponema_pallidum_SS14_uid58977|ntpJ NC_010741.1 upstream YP_001933147.1 D 162921 163091 TATAGCTATTTTTCAGGAGAGCTCAAGTCTCTGTCTGTATAGGGAGGGTGCACGAGCGAGCTCGTACGCATATACGAACACGATAAGAACACATAGGTCGTAAAGATCAGATGTAGTTTTTCTTTGAAAAACGAGGATATCTGTGTTCGTGGAGGGGGAGAGAGACAGGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:162921:163091:D YP_001933147.1|Treponema_pallidum_SS14_uid58977|dat NC_010741.1 upstream YP_001933148.1 R 164239 164238 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:164239:164238:R YP_001933148.1|Treponema_pallidum_SS14_uid58977|TPASS_0142 NC_010741.1 upstream YP_001933149.1 R 166013 166012 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:166013:166012:R YP_001933149.1|Treponema_pallidum_SS14_uid58977|TPASS_0143 NC_010741.1 upstream YP_001933150.1 R 166978 167086 GCGGGCGAGTGTACCGAATGCACTCCCTTTGAGCAAGACAGCAGCACTGTACCCCTCACCCTGGATAGGAGCTCTAGAGCTATGCTATAGTCCCCGGCGGGGAGAGGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:166978:167086:R YP_001933150.1|Treponema_pallidum_SS14_uid58977|TPASS_0144 NC_010741.1 upstream YP_001933151.1 D 166978 167086 AGCCTCTCCCCGCCGGGGACTATAGCATAGCTCTAGAGCTCCTATCCAGGGTGAGGGGTACAGTGCTGCTGTCTTGCTCAAAGGGAGTGCATTCGGTACACTCGCCCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:166978:167086:D YP_001933151.1|Treponema_pallidum_SS14_uid58977|TPASS_0145 NC_010741.1 upstream YP_001933152.1 R 172322 172321 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:172322:172321:R YP_001933152.1|Treponema_pallidum_SS14_uid58977|TPASS_0147 NC_010741.1 upstream YP_001933153.1 R 172897 172896 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:172897:172896:R YP_001933153.1|Treponema_pallidum_SS14_uid58977|TPASS_0148 NC_010741.1 upstream YP_001933154.1 R 173484 173483 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:173484:173483:R YP_001933154.1|Treponema_pallidum_SS14_uid58977|TPASS_0149 NC_010741.1 upstream YP_001933155.1 R 173944 173943 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:173944:173943:R YP_001933155.1|Treponema_pallidum_SS14_uid58977|TPASS_0150 NC_010741.1 upstream YP_001933156.1 R 174947 174946 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:174947:174946:R YP_001933156.1|Treponema_pallidum_SS14_uid58977|TPASS_0151 NC_010741.1 upstream YP_001933157.1 R 176478 176552 GTCTCCGGTGGACGTGCATGCAATGCGGCGGACCCCTCCACACAGAGGAAGAGGCGGTGCTGTGCGCGTTCTCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:176478:176552:R YP_001933157.1|Treponema_pallidum_SS14_uid58977|rnfC NC_010741.1 upstream YP_001933158.1 R 177045 177268 ATGCACAGTGTGGGGAACGTTAGACGAGACCCACCTTTTCACGCGACGAACACCTACTTTCATACACGGTGCGTCCCCGTGCCGGATACCAGTTGCTCCTCCCAAACGTCCTCCCCGTCTTTCCCAGTACGACACCACAGCCCATGGCGGGTACAGCCGCCCCAGTATAGCGCACACAACGCTCCCTTGACAAAGGTTTAGAGAGTATAGGAGACTGCCCCGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:177045:177268:R YP_001933158.1|Treponema_pallidum_SS14_uid58977|TPASS_0153 NC_010741.1 upstream YP_001933159.1 D 177045 177268 CGCGGGGCAGTCTCCTATACTCTCTAAACCTTTGTCAAGGGAGCGTTGTGTGCGCTATACTGGGGCGGCTGTACCCGCCATGGGCTGTGGTGTCGTACTGGGAAAGACGGGGAGGACGTTTGGGAGGAGCAACTGGTATCCGGCACGGGGACGCACCGTGTATGAAAGTAGGTGTTCGTCGCGTGAAAAGGTGGGTCTCGTCTAACGTTCCCCACACTGTGCAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:177045:177268:D YP_001933159.1|Treponema_pallidum_SS14_uid58977|TPASS_0154 NC_010741.1 upstream YP_001933160.1 D 178307 178311 CCGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:178307:178311:D YP_001933160.1|Treponema_pallidum_SS14_uid58977|TPASS_0155 NC_010741.1 upstream YP_001933161.1 R 179873 179872 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:179873:179872:R YP_001933161.1|Treponema_pallidum_SS14_uid58977|TPASS_0156 NC_010741.1 upstream YP_001933162.1 R 180772 180771 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:180772:180771:R YP_001933162.1|Treponema_pallidum_SS14_uid58977|TPASS_0157 NC_010741.1 upstream YP_001933163.1 R 181455 181457 AAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:181455:181457:R YP_001933163.1|Treponema_pallidum_SS14_uid58977|TPASS_0158 NC_010741.1 upstream YP_001933164.1 R 182487 182601 GAACGGGAATGCCGGAGCGGGATCCAGCGCATGCAGTGCTGAGACCTGCGCATAATAGCACAGTGTACGGCACCCGTGGTTTAGAAAAAAATGACGAAGGAGAAAAGGAAAAACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:182487:182601:R YP_001933164.1|Treponema_pallidum_SS14_uid58977|TPASS_0159 NC_010741.1 upstream YP_001933165.1 R 184456 184457 AG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:184456:184457:R YP_001933165.1|Treponema_pallidum_SS14_uid58977|proS NC_010741.1 upstream YP_001933166.1 R 184551 184566 CAAAGATGCGGACACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:184551:184566:R YP_001933166.1|Treponema_pallidum_SS14_uid58977|TPASS_0161 NC_010741.1 upstream YP_001933167.1 R 185620 185793 GTGACACTCCTTGGGTGAATTTTGATGCATCAAAGTAGCGGATCACGCAGGAAACGTCAATTTTTCAGTACCCTTTCAGGAAAAGAAAACGGCACTCTGGCGCGGACCTCTCGAGCTACATGATAAAGAAGCATTTGATCTTCCTCGCATAAGCAGCTACAGTTGCGCCCTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:185620:185793:R YP_001933167.1|Treponema_pallidum_SS14_uid58977|ruvB NC_010741.1 upstream YP_001933168.1 D 185620 185793 AAGAGGGCGCAACTGTAGCTGCTTATGCGAGGAAGATCAAATGCTTCTTTATCATGTAGCTCGAGAGGTCCGCGCCAGAGTGCCGTTTTCTTTTCCTGAAAGGGTACTGAAAAATTGACGTTTCCTGCGTGATCCGCTACTTTGATGCATCAAAATTCACCCAAGGAGTGTCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:185620:185793:D YP_001933168.1|Treponema_pallidum_SS14_uid58977|troA NC_010741.1 upstream YP_001933169.1 D 186721 186867 CGTGGAATGTAGAGTTGAGTGGGTAGAAGAGCCGTTGGTGGTCGGCTGTACGGCAGCGCCTGTTCACGACGTGGTGATTAGTGAAGGAGGTGGCGCGCTCACCGCTGACGGCTCTTACCCGATTGAGCGAAAAGAAGGGAGCAGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:186721:186867:D YP_001933169.1|Treponema_pallidum_SS14_uid58977|troB NC_010741.1 upstream YP_001933170.1 D 187640 187639 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:187640:187639:D YP_001933170.1|Treponema_pallidum_SS14_uid58977|troC NC_010741.1 upstream YP_001933171.1 D 188537 188539 AAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:188537:188539:D YP_001933171.1|Treponema_pallidum_SS14_uid58977|troD NC_010741.1 upstream YP_001933172.1 D 189644 189652 GCTGAGTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:189644:189652:D YP_001933172.1|Treponema_pallidum_SS14_uid58977|troR NC_010741.1 upstream YP_001933173.1 D 190115 190193 TCTTTTTGTATGGGGTGAGGATGCGCCTTTTGTCAGATAAAAGGGGATGTGCAAAACGTATTGTTGAGAGGAGAGGGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:190115:190193:D YP_001933173.1|Treponema_pallidum_SS14_uid58977|gpmA NC_010741.1 upstream YP_001933174.1 D 191148 191172 TATTCCGTTCATTTATCGGTGTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:191148:191172:D YP_001933174.1|Treponema_pallidum_SS14_uid58977|TPASS_0169 NC_010741.1 upstream YP_001933175.1 D 191268 191267 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:191268:191267:D YP_001933175.1|Treponema_pallidum_SS14_uid58977|pfs NC_010741.1 upstream YP_001933176.1 D 192078 192176 TGGTCGGGAGTAAGACAGTGGGCTGAGCAGTCGGGCGATGCTGTGGGGGGCTTGTGTAGGTGTATACCCAGTTGTTATACTGCGGCACTCGGAGGTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:192078:192176:D YP_001933176.1|Treponema_pallidum_SS14_uid58977|tpp15 NC_010741.1 upstream YP_001933177.1 R 193281 193314 AACTCATGGGCAGGACCTTGCTTCTAAGGAGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:193281:193314:R YP_001933177.1|Treponema_pallidum_SS14_uid58977|TPASS_0172 NC_010741.1 upstream YP_001933178.1 R 193999 193998 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:193999:193998:R YP_001933178.1|Treponema_pallidum_SS14_uid58977|TPASS_0173 NC_010741.1 upstream YP_001933179.1 R 194810 194809 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:194810:194809:R YP_001933179.1|Treponema_pallidum_SS14_uid58977|TPASS_0174 NC_010741.1 upstream YP_001933180.1 R 195192 195221 AAAAATTTCGTCACGCATGCTGCGCGGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:195192:195221:R YP_001933180.1|Treponema_pallidum_SS14_uid58977|TPASS_0175 NC_010741.1 upstream YP_001933181.1 R 195489 195488 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:195489:195488:R YP_001933181.1|Treponema_pallidum_SS14_uid58977|TPASS_0176 NC_010741.1 upstream YP_001933182.1 R 196796 196888 ACCTCCACTCAAAATATAACCCAAGAAGGGAGGCGGAGCGTTTTGTCGCTGCGATCCTAGAAGGTCGCCGCATTGTGGTAATAACAGAGCCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:196796:196888:R YP_001933182.1|Treponema_pallidum_SS14_uid58977|TPASS_0177 NC_010741.1 upstream YP_001933183.1 R 197816 197815 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:197816:197815:R YP_001933183.1|Treponema_pallidum_SS14_uid58977|TPASS_0178 NC_010741.1 upstream YP_001933184.1 R 199699 199698 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:199699:199698:R YP_001933184.1|Treponema_pallidum_SS14_uid58977|TPASS_0179 NC_010741.1 upstream YP_001933185.1 R 199799 199798 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:199799:199798:R YP_001933185.1|Treponema_pallidum_SS14_uid58977|TPASS_0180 NC_010741.1 upstream YP_001933186.1 D 199791 199790 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:199791:199790:D YP_001933186.1|Treponema_pallidum_SS14_uid58977|TPASS_0181 NC_010741.1 upstream YP_001933187.1 D 200074 200073 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:200074:200073:D YP_001933187.1|Treponema_pallidum_SS14_uid58977|TPASS_0182 NC_010741.1 upstream YP_001933188.1 R 201702 201705 TCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:201702:201705:R YP_001933188.1|Treponema_pallidum_SS14_uid58977|TPASS_0183 NC_010741.1 upstream YP_001933189.1 R 202171 202257 AAAACGGCGTCCCTCCCAGACACGGCAGCCTAACACGGCGATAATCGAATTGACAAGGGAAGTGCCTATCCGGTAGCATCCGGCGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:202171:202257:R YP_001933189.1|Treponema_pallidum_SS14_uid58977|smpB NC_010741.1 upstream YP_001933190.1 D 202171 202257 GGCGCCGGATGCTACCGGATAGGCACTTCCCTTGTCAATTCGATTATCGCCGTGTTAGGCTGCCGTGTCTGGGAGGGACGCCGTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:202171:202257:D YP_001933190.1|Treponema_pallidum_SS14_uid58977|sip NC_010741.1 upstream YP_001933191.1 D 202966 203019 TGTGTAGGCGCCGCATTTGTGGTGCGTGCTGCGCATCGTGCTGTTCCTTTTATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:202966:203019:D YP_001933191.1|Treponema_pallidum_SS14_uid58977|TPASS_0186 NC_010741.1 upstream YP_001933192.1 D 204202 204264 GTGGTCGTGAGAATGGGTACGCCGTGTACTATTTGAATTCGGGTATATTTCCTTTGGAAGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:204202:204264:D YP_001933192.1|Treponema_pallidum_SS14_uid58977|tuf NC_010741.1 upstream YP_001933193.1 D 205753 205823 GCGTTTGCGGCGCGGAGTGTGTTTGGAGTTATTTTGCAAGGTGGGTGCGGTTTTAGGCTGATGGAGGGGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:205753:205823:D YP_001933193.1|Treponema_pallidum_SS14_uid58977|rpsJ NC_010741.1 upstream YP_001933194.1 D 206133 206178 GGCGTGTGTGTTTTGTCTGTGCGTTGCGATACGGAAGAGGTAGGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:206133:206178:D YP_001933194.1|Treponema_pallidum_SS14_uid58977|rplC NC_010741.1 upstream YP_001933195.1 D 206806 206818 GGGTGTATACGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:206806:206818:D YP_001933195.1|Treponema_pallidum_SS14_uid58977|rplD NC_010741.1 upstream YP_001933196.1 D 207456 207455 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:207456:207455:D YP_001933196.1|Treponema_pallidum_SS14_uid58977|rplW NC_010741.1 upstream YP_001933197.1 D 207741 207795 CGGTAAGCTGCGGTAGCTGCGTAAGGTGCCAGAGCGGTGACCGAAGGAGACGGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:207741:207795:D YP_001933197.1|Treponema_pallidum_SS14_uid58977|rplB NC_010741.1 upstream YP_001933198.1 D 208618 208626 GGGGGGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:208618:208626:D YP_001933198.1|Treponema_pallidum_SS14_uid58977|rpsS NC_010741.1 upstream YP_001933199.1 D 208915 208922 GTGAACTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:208915:208922:D YP_001933199.1|Treponema_pallidum_SS14_uid58977|rplV NC_010741.1 upstream YP_001933200.1 D 209281 209280 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:209281:209280:D YP_001933200.1|Treponema_pallidum_SS14_uid58977|rpsC NC_010741.1 upstream YP_001933201.1 D 210025 210027 GGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:210025:210027:D YP_001933201.1|Treponema_pallidum_SS14_uid58977|rplP NC_010741.1 upstream YP_001933202.1 D 210448 210461 AGGGGAGCTGTAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:210448:210461:D YP_001933202.1|Treponema_pallidum_SS14_uid58977|rpmC NC_010741.1 upstream YP_001933203.1 D 210681 210694 TGGAGCAGTGTACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:210681:210694:D YP_001933203.1|Treponema_pallidum_SS14_uid58977|rpsQ NC_010741.1 upstream YP_001933204.1 D 210950 210961 GGGATTTGTGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:210950:210961:D YP_001933204.1|Treponema_pallidum_SS14_uid58977|rplN NC_010741.1 upstream YP_001933205.1 D 211331 211341 AGGGGAAAGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:211331:211341:D YP_001933205.1|Treponema_pallidum_SS14_uid58977|rplX NC_010741.1 upstream YP_001933206.1 D 211650 211649 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:211650:211649:D YP_001933206.1|Treponema_pallidum_SS14_uid58977|rplE NC_010741.1 upstream YP_001933207.1 D 212208 212218 GAGAGGATTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:212208:212218:D YP_001933207.1|Treponema_pallidum_SS14_uid58977|rpsN NC_010741.1 upstream YP_001933208.1 D 212405 212419 GAAAGGAGGGAGAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:212405:212419:D YP_001933208.1|Treponema_pallidum_SS14_uid58977|rpsH NC_010741.1 upstream YP_001933209.1 D 212819 212827 GGGGCTGTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:212819:212827:D YP_001933209.1|Treponema_pallidum_SS14_uid58977|rplF NC_010741.1 upstream YP_001933210.1 D 213368 213375 AGGTACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:213368:213375:D YP_001933210.1|Treponema_pallidum_SS14_uid58977|rplR NC_010741.1 upstream YP_001933211.1 D 213739 213746 GAGAGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:213739:213746:D YP_001933211.1|Treponema_pallidum_SS14_uid58977|rpsE NC_010741.1 upstream YP_001933212.1 D 214266 214267 GC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:214266:214267:D YP_001933212.1|Treponema_pallidum_SS14_uid58977|rpmD NC_010741.1 upstream YP_001933213.1 D 214453 214452 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:214453:214452:D YP_001933213.1|Treponema_pallidum_SS14_uid58977|rplO NC_010741.1 upstream YP_001933214.1 D 214915 214921 GCGGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:214915:214921:D YP_001933214.1|Treponema_pallidum_SS14_uid58977|secY NC_010741.1 upstream YP_001933215.1 D 216275 216278 GTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:216275:216278:D YP_001933215.1|Treponema_pallidum_SS14_uid58977|rpmJ NC_010741.1 upstream YP_001933216.1 D 216393 216407 GGGGGTAGACGAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:216393:216407:D YP_001933216.1|Treponema_pallidum_SS14_uid58977|rpsM NC_010741.1 upstream YP_001933217.1 D 216774 216790 GGGATCAGGAGGGCATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:216774:216790:D YP_001933217.1|Treponema_pallidum_SS14_uid58977|rpsK NC_010741.1 upstream YP_001933218.1 D 217172 217185 TAAAAGGAGTGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:217172:217185:D YP_001933218.1|Treponema_pallidum_SS14_uid58977|rpoA NC_010741.1 upstream YP_001933219.1 D 218231 218230 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:218231:218230:D YP_001933219.1|Treponema_pallidum_SS14_uid58977|rplQ NC_010741.1 upstream YP_001933220.1 D 218726 218748 CAGTTGGGCAATGGAGGGGTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:218726:218748:D YP_001933220.1|Treponema_pallidum_SS14_uid58977|TPASS_0214 NC_010741.1 upstream YP_001933221.1 D 218947 219151 TCGCGCATCCTCGTGATATGAGGTTCCGTCCCAAGGACGTTAGGTGGTTGTCCGTTTCTGTGCTTGGCAGTTACCATTGGGATGCAGGTCGCATCGTGGTCGGTGTAGTCAGACGGTAAATAGGTGTTTTCTTGACCGAGGGCGGCGTCTCTCGTTACTTTTACGGCATTACCGCGAGGGTGTTATGGCAAAAAAGGAGAAGAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:218947:219151:D YP_001933221.1|Treponema_pallidum_SS14_uid58977|grpE NC_010741.1 upstream YP_001933222.1 D 219815 219929 CAGGCAGGGTATGCTGAGAGGTCAGGATGGAGTTCTGGAGCACCGGTGCTAGGTAACGGCTATACTGCGCGCCCTGCAGGCAGGGCGGGTATCCTATACAGAGGAGTTGAGGGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:219815:219929:D YP_001933222.1|Treponema_pallidum_SS14_uid58977|dnaK NC_010741.1 upstream YP_001933223.1 D 222984 223383 CGCAGCAGGTGCGGGTTCCGGCCGGCACGCAGGGAGGTGCGCTTTTGCGTGTTAAGGGTATGGGGGTCCCACTGGCGCGCGGGGCGGGGGATTTGTACGTAAAGGTATTGGTGCGTATTCCAACTACGCTTTCTGCACGGTCGCGTGCGCTCTTAGCGGAGATTTCTCAAGAGGAAGGGGAAAACGCCCATCCGCCGTTGCTTGAACTTTCAAGTCTCAAGTAGGCTACAGAAAGGGGCGCGTGGGGTAAAAGGATTATTCTCGCGTGCGTGGTGTTTCTTTCTCGTGTGTCGCAGGATGAGTTGGCTTCATCGTGATGGGTGCGTGTGCTATCTGAGTTTTCTTCCCACAGTTTAAAAGACAACGTGTTTTTGAAGCAGCCATACAAAGGGAACGGTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:222984:223383:D YP_001933223.1|Treponema_pallidum_SS14_uid58977|TPASS_0218 NC_010741.1 upstream YP_001933224.1 D 224854 224856 GTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:224854:224856:D YP_001933224.1|Treponema_pallidum_SS14_uid58977|TPASS_0219 NC_010741.1 upstream YP_001933225.1 D 227005 227032 GAAATGAGGAAAAGTTCGGGAGCGCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:227005:227032:D YP_001933225.1|Treponema_pallidum_SS14_uid58977|spoIIAA1 NC_010741.1 upstream YP_001933226.1 D 227360 227359 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:227360:227359:D YP_001933226.1|Treponema_pallidum_SS14_uid58977|TPASS_0221 NC_010741.1 upstream YP_001933227.1 D 228143 228151 GGAGACCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:228143:228151:D YP_001933227.1|Treponema_pallidum_SS14_uid58977|TPASS_0222 NC_010741.1 upstream YP_001933228.1 D 228599 228865 CGGTGTTTGTGTAACCATTTGCCGCAGGAAGCTCATCCGTGTGGCTGCGCGGGCTTGTGTGCTCTGAAGTCGGGCTGTCGATTCACTGGGGTGCATAAATTGACAGGGTCAGGGGGCGTGTCTACACTGTGAGACATGGACCTCTCTGAAGGCGCGCGTGCGTTAAACGCTGCTCTTGAAGGAACGGTGGTGCACGCGCTGTTATCTCCTCTTGGTTTGCGCGCGTATTTTCCCCACGGGATTGTTGCACAGAATGCAGAGGCGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:228599:228865:D YP_001933228.1|Treponema_pallidum_SS14_uid58977|TPASS_0223 NC_010741.1 upstream YP_001933229.1 D 230174 230209 TTTTACCGGCGAGGTATGGAGTCCCTGTAGGAGACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:230174:230209:D YP_001933229.1|Treponema_pallidum_SS14_uid58977|TPASS_0224 NC_010741.1 upstream YP_001933230.1 D 230315 230359 GTGTTAGTTTTTGGCTCGTGTTGATTTAAAAAGGAGGACGAAATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:230315:230359:D YP_001933230.1|Treponema_pallidum_SS14_uid58977|TPASS_0225 NC_010741.1 upstream YP_001933231.1 R 236939 236990 GTAGCGACATGCATGCAGTACTTCCACCTGCTAGGAGGAGTCAAGGAAATGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:236939:236990:R YP_001933231.1|Treponema_pallidum_SS14_uid58977|TPASS_0226 NC_010741.1 upstream YP_001933232.1 R 237759 237824 TGCCATAGTATTCGCGTGTCGCGGGTGTGTACGCGCCACAGGGCACGGTGCATCTTCTGTGGACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:237759:237824:R YP_001933232.1|Treponema_pallidum_SS14_uid58977|TPASS_0227 NC_010741.1 upstream YP_001933233.1 R 238641 238640 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:238641:238640:R YP_001933233.1|Treponema_pallidum_SS14_uid58977|TPASS_0228 NC_010741.1 upstream YP_001933234.1 D 238584 238583 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:238584:238583:D YP_001933234.1|Treponema_pallidum_SS14_uid58977|TPASS_0229 NC_010741.1 upstream YP_001933235.1 D 239418 239421 AATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:239418:239421:D YP_001933235.1|Treponema_pallidum_SS14_uid58977|priA NC_010741.1 upstream YP_001933236.1 D 241396 241495 GGCGAGTAGATGTACTCCGTGTTATCCTGCTGTTTGCGTGTTTGGTTGACCGGTAGTATGCGGTGCCTGGTATAGGTGCGGGACGGAAAGGAGAGAGGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:241396:241495:D YP_001933236.1|Treponema_pallidum_SS14_uid58977|TPASS_0231 NC_010741.1 upstream YP_001933237.1 D 242147 242245 TTGCCTGTAGCAGGGCATTCTGGTAGGCGGTGTGTGGTTTTGAGTTCTGCCGGTAACAGAAAGAGTGTCGTGTGAATTTCAATAGTTTTTCTCTAGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:242147:242245:D YP_001933237.1|Treponema_pallidum_SS14_uid58977|TPASS_0232 NC_010741.1 upstream YP_001933238.1 D 242363 242392 AGTGTGCGAAACCGCTAGTGGGGATGGCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:242363:242392:D YP_001933238.1|Treponema_pallidum_SS14_uid58977|TPASS_0233 NC_010741.1 upstream YP_001933239.1 D 243145 243172 TCCGTCTGTGGATGTGAGGAGGGGTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:243145:243172:D YP_001933239.1|Treponema_pallidum_SS14_uid58977|rpmG NC_010741.1 upstream YP_001933240.1 D 243471 243492 AGTGCTTTCGAAAAGGTGTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:243471:243492:D YP_001933240.1|Treponema_pallidum_SS14_uid58977|secE NC_010741.1 upstream YP_001933241.1 D 243673 243681 GGGGATAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:243673:243681:D YP_001933241.1|Treponema_pallidum_SS14_uid58977|nusG NC_010741.1 upstream YP_001933242.1 D 244240 244345 TTTTCTTCTTCCAGGGTGGAGAGTGTTGCAATGCGCATGATTGCCTGCCGCTTACGCGTTGGTTTCGGGTGTTTTGTTGTTTTTTACGTCATAAGGAGAGGCCAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:244240:244345:D YP_001933242.1|Treponema_pallidum_SS14_uid58977|rplK NC_010741.1 upstream YP_001933243.1 D 244783 244782 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:244783:244782:D YP_001933243.1|Treponema_pallidum_SS14_uid58977|rplA NC_010741.1 upstream YP_001933244.1 D 245464 245464 T Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:245464:245464:D YP_001933244.1|Treponema_pallidum_SS14_uid58977|rplJ NC_010741.1 upstream YP_001933245.1 D 246008 246115 GCGGTTGTTGTAACTTAGTTACGGGGTATGTGTTAGGCGGTCAGGCTTCTGGGGTGCTGTCTTCCTGTCCGTTTATAGGGGTTATTTCGCATACAAGGAGAAGATAAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:246008:246115:D YP_001933245.1|Treponema_pallidum_SS14_uid58977|rplL NC_010741.1 upstream YP_001933246.1 D 246506 246767 TGTCTGGTTTTTTTTGCATGCGTCCGGCGCGTCGTTGTGTGCCTCTGACACCCTTTCGTGTGGGAGGGCGTCGCGCTTTTGAGTAGAGCGTGGGCTTCTATTTCTTTTCATACTTGTTCTCGGCATTTTGGCATGCGGGTTGGGTCGCGTTCTCCTCACTTGAGTGGAGGGGACGGCGTCTCCCCTGTGTGGGGAGTATTACGGTAGAGCGTGTGGTATAGGGAGCACCGTGTCGGTTCGGTGCAGCTTGAGGGGGGAGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:246506:246767:D YP_001933246.1|Treponema_pallidum_SS14_uid58977|rpoB NC_010741.1 upstream YP_001933247.1 D 250305 250316 GGGGTGCAGGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:250305:250316:D YP_001933247.1|Treponema_pallidum_SS14_uid58977|rpoC NC_010741.1 upstream YP_001933248.1 D 254568 254669 TGGATTGACCTGGTTTGGCTATTCTGAGTATCCTAGCCGCGTGTGCTGTGTGCGGCAAGGTTTACGGTGTTGAGGATTTTTTTGGGGAAGTGAGCGAAAAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:254568:254669:D YP_001933248.1|Treponema_pallidum_SS14_uid58977|rpsL NC_010741.1 upstream YP_001933249.1 D 255045 255065 GGGCTGGGGAGAGGAGTTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:255045:255065:D YP_001933249.1|Treponema_pallidum_SS14_uid58977|rpsG NC_010741.1 upstream YP_001933250.1 D 255537 255559 ATACGCGTCTCTTCCTGGGGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:255537:255559:D YP_001933250.1|Treponema_pallidum_SS14_uid58977|TPASS_0245 NC_010741.1 upstream YP_001933251.1 D 259016 259160 ATGTGATGCGAAGCGTGCGCAAGAGAATTTTGCGCGTTTTTTTTCCGCTGAAGCACGGAATATCGCCACCTTTGCGGGGGATGCGCATTTTCGTTGTGTACCTATTTTACAAGCTGATCGGTTTGTGTTTGTTCCGCAGGAGGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:259016:259160:D YP_001933251.1|Treponema_pallidum_SS14_uid58977|TPASS_0246 NC_010741.1 upstream YP_001933252.1 D 260955 261004 TGTGGTGCGTGGACGTATGTGCTTATTGTGAGTAGGGAGAGGGGACAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:260955:261004:D YP_001933252.1|Treponema_pallidum_SS14_uid58977|amiA NC_010741.1 upstream YP_001933253.1 D 262079 262144 TAGGGGATGGGGCAGCATTGTACGGTGTAGTGAGGGCGGTGTGTTGGACTCTCTTGCTAATAATTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:262079:262144:D YP_001933253.1|Treponema_pallidum_SS14_uid58977|TPASS_0248 NC_010741.1 upstream YP_001933254.1 D 262550 262627 ATGCAGGGGTGTTGACAAAATAGGCGGTGAGCGTATACTCGAAGAGTGGTTATCTTATTGTGCGAAAGGAGCGTTTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:262550:262627:D YP_001933254.1|Treponema_pallidum_SS14_uid58977|flaA1 NC_010741.1 upstream YP_001933255.1 D 263681 263730 TGCAGTAGTCTTCCTAGGGAGAGGGGGCGGTGGGGTTCTAGGCGCGGGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:263681:263730:D YP_001933255.1|Treponema_pallidum_SS14_uid58977|TPASS_0250a NC_010741.1 upstream YP_001933256.1 D 263793 263792 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:263793:263792:D YP_001933256.1|Treponema_pallidum_SS14_uid58977|rpsT NC_010741.1 upstream YP_001933257.1 D 264081 264111 GGCGGCTGTTTGCCCGCGTGTGTTTCTTGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:264081:264111:D YP_001933257.1|Treponema_pallidum_SS14_uid58977|TPASS_0251 NC_010741.1 upstream YP_001933258.1 D 264419 264418 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:264419:264418:D YP_001933258.1|Treponema_pallidum_SS14_uid58977|TPASS_0252 NC_010741.1 upstream YP_001933259.1 D 266050 266049 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:266050:266049:D YP_001933259.1|Treponema_pallidum_SS14_uid58977|TPASS_0253 NC_010741.1 upstream YP_001933260.1 D 266464 266699 CGTAGATATGGTTGGGTCTTGACTGAATGCCTAAAAGAGGCGCACAGTTCCTGTATACACCACGTGAAGTTAAGGGTGTCGTCTTCTGTTTTCCTGGTGTTCTAGTCTTTAGCCAATTTAGGTGAGAGTGTTCTTGGGCGTGTACTCGTTGGACGTCGGTTTTTCTTTCCAGGGTTGTAGCGTGCACGGTGCTGCGTGCTGTTCAAACCGGTGTCGGTAATCTCGGTGTGTAAGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:266464:266699:D YP_001933260.1|Treponema_pallidum_SS14_uid58977|rho NC_010741.1 upstream YP_001933261.1 D 268260 268377 GTAAGGAGACTGGAACGTGTGTCGGTTACACCCGGCGTGTACGAGCCTTCTGGAAGAGGGTGGATGTAACCTTTTTAAGGGCGCGGCGCGCTGTAGAATGGGGAAAGGAGCGATTCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:268260:268377:D YP_001933261.1|Treponema_pallidum_SS14_uid58977|rpmE NC_010741.1 upstream YP_001933262.1 D 268582 268625 GAGTACACCTGTGGTGTACCATTACGTCTTTCCCCTAGGTGAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:268582:268625:D YP_001933262.1|Treponema_pallidum_SS14_uid58977|pgsA NC_010741.1 upstream YP_001933263.1 D 269277 269372 AACTGAAGGTAGGATCAGCGCTCAGTGGAGATATGCGGCGTGCTACTATGCACGGTGACGATCTGTGCATTCTATAACAGGGGAGGAGAGAAGTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:269277:269372:D YP_001933263.1|Treponema_pallidum_SS14_uid58977|glpQ NC_010741.1 upstream YP_001933264.1 R 271220 271297 GCCACCTCATGGGGAAAATCATACGGCATACTCTTAGCAAGCGCACACACCGTCCTTCCCACCTCTGCCGGGAGCAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:271220:271297:R YP_001933264.1|Treponema_pallidum_SS14_uid58977|TPASS_0258 NC_010741.1 upstream YP_001933265.1 D 271220 271297 GCTGCTCCCGGCAGAGGTGGGAAGGACGGTGTGTGCGCTTGCTAAGAGTATGCCGTATGATTTTCCCCATGAGGTGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:271220:271297:D YP_001933265.1|Treponema_pallidum_SS14_uid58977|TPASS_0259 NC_010741.1 upstream YP_001933266.1 R 273387 273500 GGTACATTTTCGATAGAACGGTCATGCACTTAAGTCTTTTTCCAGAATTCACGTCACGCGCTCCTGCGCGCACACCTGCAGAGATCGTTCGCACGCCTTTTCCAGGAAAGGTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:273387:273500:R YP_001933266.1|Treponema_pallidum_SS14_uid58977|TPASS_0260 NC_010741.1 upstream YP_001933267.1 D 273387 273500 CCACCTTTCCTGGAAAAGGCGTGCGAACGATCTCTGCAGGTGTGCGCGCAGGAGCGCGTGACGTGAATTCTGGAAAAAGACTTAAGTGCATGACCGTTCTATCGAAAATGTACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:273387:273500:D YP_001933267.1|Treponema_pallidum_SS14_uid58977|TPASS_0261 NC_010741.1 upstream YP_001933268.1 D 274522 274521 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:274522:274521:D YP_001933268.1|Treponema_pallidum_SS14_uid58977|crp NC_010741.1 upstream YP_001933269.1 D 275197 275210 ACCGTTGTAGCGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:275197:275210:D YP_001933269.1|Treponema_pallidum_SS14_uid58977|TPASS_0263 NC_010741.1 upstream YP_001933270.1 D 276996 276999 TGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:276996:276999:D YP_001933270.1|Treponema_pallidum_SS14_uid58977|deoC NC_010741.1 upstream YP_001933271.1 R 279456 279505 CCCTATTCACATACAAACGCTGCCCCGGCAAAATACTCCCAGGAGGAATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:279456:279505:R YP_001933271.1|Treponema_pallidum_SS14_uid58977|braC NC_010741.1 upstream YP_001933272.1 D 279456 279505 GATTCCTCCTGGGAGTATTTTGCCGGGGCAGCGTTTGTATGTGAATAGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:279456:279505:D YP_001933272.1|Treponema_pallidum_SS14_uid58977|TPASS_0266 NC_010741.1 upstream YP_001933273.1 D 284609 284739 TCCCGAACACGGAAGTCAAGCTCTCCTACGCCGATGATACTGCTCCTTCGCGGGAAAGTAGGTAGTAGCCAGGCTCCCCTTTGCCCATCACTCGCTTGACAAAATATTATCCGAAACCTTAAAGTCCGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:284609:284739:D YP_001933273.1|Treponema_pallidum_SS14_uid58977|TPASS_0267 NC_010741.1 upstream YP_001933274.1 D 285102 285101 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:285102:285101:D YP_001933274.1|Treponema_pallidum_SS14_uid58977|TPASS_0268 NC_010741.1 upstream YP_001933275.1 D 285756 285764 GTTTTCTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:285756:285764:D YP_001933275.1|Treponema_pallidum_SS14_uid58977|TPASS_0269 NC_010741.1 upstream YP_001933276.1 D 287214 287286 GTTTCTGATTCGCAGTGGAGATTCATTGTTGTTAGAAAAAAACGAGCATGCAGTAGAGCGTGAGGAAGGGTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:287214:287286:D YP_001933276.1|Treponema_pallidum_SS14_uid58977|pcnA NC_010741.1 upstream YP_001933277.1 R 289695 289694 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:289695:289694:R YP_001933277.1|Treponema_pallidum_SS14_uid58977|parB NC_010741.1 upstream YP_001933278.1 R 290443 290574 AGTTCATCGTATCACTCTAGCTTTTGCACACCGTATCTCCTTACCAGGATTTACCCCATCGCATAGCTTCCCATTCAGACGCGCTTTCGAAGTCCTTTTATTTATTTAGAAAGTGGAGTACACTCCGGCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:290443:290574:R YP_001933278.1|Treponema_pallidum_SS14_uid58977|parA NC_010741.1 upstream YP_001933279.1 D 290443 290574 GGTGCCGGAGTGTACTCCACTTTCTAAATAAATAAAAGGACTTCGAAAGCGCGTCTGAATGGGAAGCTATGCGATGGGGTAAATCCTGGTAAGGAGATACGGTGTGCAAAAGCTAGAGTGATACGATGAACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:290443:290574:D YP_001933279.1|Treponema_pallidum_SS14_uid58977|TPASS_0273 NC_010741.1 upstream YP_001933280.1 R 291905 291992 GCGATGTTTAAACTCACCCGCCAGAGTGTGCTGCGCACCGCAGCACAAGGGCATGTGCATCTTTAAGGGAAAAAGGGAGCATACGATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:291905:291992:R YP_001933280.1|Treponema_pallidum_SS14_uid58977|TPASS_0274 NC_010741.1 upstream YP_001933281.1 R 292743 292742 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:292743:292742:R YP_001933281.1|Treponema_pallidum_SS14_uid58977|TPASS_0275 NC_010741.1 upstream YP_001933282.1 R 293606 293777 ACGTCCAGTTCGCTACGCGTGCGCCCTTGTTATACCCCTTGCAAAGACTTGGTGAGTGTGGCCCTTATCAGGTCGGTCCCGCTGCCCAGGCTATGGGAGCCAGACTGTGCGTGCTCGGCGCCGCACTACTTTCAGATATGTATAGGGTTTACGGTGAGAGAAGTTCCTTACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:293606:293777:R YP_001933282.1|Treponema_pallidum_SS14_uid58977|TPASS_0276 NC_010741.1 upstream YP_001933283.1 R 295125 295251 TCCATCATCCGCCCATGAGTGTTCTGAGACTGTTTGCGCTCCTCGTCTGTTGTCTGATCACCAGCGCACTCCCTTCCCCACATGGACTGCCGCTTATTTGCCACAGTCTTCCGAGGAAGACGAGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:295125:295251:R YP_001933283.1|Treponema_pallidum_SS14_uid58977|ctp NC_010741.1 upstream YP_001933284.1 D 295125 295251 GCGCTCGTCTTCCTCGGAAGACTGTGGCAAATAAGCGGCAGTCCATGTGGGGAAGGGAGTGCGCTGGTGATCAGACAACAGACGAGGAGCGCAAACAGTCTCAGAACACTCATGGGCGGATGATGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:295125:295251:D YP_001933284.1|Treponema_pallidum_SS14_uid58977|TPASS_0278 NC_010741.1 upstream YP_001933285.1 D 295381 295425 CTTCCGTTTTCTGCCCTGTACTTCCCTTCTTCGTTTTTCACCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:295381:295425:D YP_001933285.1|Treponema_pallidum_SS14_uid58977|rpsA NC_010741.1 upstream YP_001933286.1 D 298014 298013 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:298014:298013:D YP_001933286.1|Treponema_pallidum_SS14_uid58977|TPASS_0280 NC_010741.1 upstream YP_001933287.1 D 298143 298158 GTGCCCGAGCCTCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:298143:298158:D YP_001933287.1|Treponema_pallidum_SS14_uid58977|TPASS_0281 NC_010741.1 upstream YP_001933288.1 D 298280 298279 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:298280:298279:D YP_001933288.1|Treponema_pallidum_SS14_uid58977|TPASS_0282 NC_010741.1 upstream YP_001933289.1 D 299000 299176 GAGGAGAAGCGTTCGCGCCGTGCGGTGCGCACGTTGTGTAGCTAGGAAGCGTAGAGAGCTCGCGTGAACACCGATTTTCCGCGAGGAGTTGACGGAGTGGGTGCGAATATAAATAGTGCTGCCTGTTTTTTGTGTAGTTCGCCGCATGTTCCTGAACAACGTGAGGGGTTGCCGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:299000:299176:D YP_001933289.1|Treponema_pallidum_SS14_uid58977|kdtB NC_010741.1 upstream YP_001933290.1 D 299657 299760 ATTGCATGAGCTGAGTATGTGATGATTCTTTTTCTCACTCGGTTGAGTGATCTTCGGGGCTGTGCTTTTAAAGTTCAGAAAAGTTTTGAGCAAGGTTCTCCTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:299657:299760:D YP_001933290.1|Treponema_pallidum_SS14_uid58977|TPASS_0284 NC_010741.1 upstream YP_001933291.1 D 300360 300359 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:300360:300359:D YP_001933291.1|Treponema_pallidum_SS14_uid58977|TPASS_0285 NC_010741.1 upstream YP_001933292.1 D 301411 301410 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:301411:301410:D YP_001933292.1|Treponema_pallidum_SS14_uid58977|TPASS_0286 NC_010741.1 upstream YP_001933293.1 D 301743 301742 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:301743:301742:D YP_001933293.1|Treponema_pallidum_SS14_uid58977|TPASS_0287 NC_010741.1 upstream YP_001933294.1 D 302366 302365 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:302366:302365:D YP_001933294.1|Treponema_pallidum_SS14_uid58977|spsF NC_010741.1 upstream YP_001933295.1 D 303314 303335 ATTACTTCAGCGTACTGCACCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:303314:303335:D YP_001933295.1|Treponema_pallidum_SS14_uid58977|TPASS_0289 NC_010741.1 upstream YP_001933296.1 D 304941 304994 AGTTGCCGTGTTGTTTTTTGGGTGTGCACTTGTTCAAGTTCAGAGGTGATGTTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:304941:304994:D YP_001933296.1|Treponema_pallidum_SS14_uid58977|TPASS_0290 NC_010741.1 upstream YP_001933297.1 D 305829 305864 AGAGGGCAGTGCTTTTTTAGGGAAAAGGAAGATCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:305829:305864:D YP_001933297.1|Treponema_pallidum_SS14_uid58977|TPASS_0291 NC_010741.1 upstream YP_001933298.1 D 306737 306736 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:306737:306736:D YP_001933298.1|Treponema_pallidum_SS14_uid58977|tpn50 NC_010741.1 upstream YP_001933299.1 D 307991 308001 AGTGTTGCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:307991:308001:D YP_001933299.1|Treponema_pallidum_SS14_uid58977|TPASS_0293 NC_010741.1 upstream YP_001933300.1 D 308156 308155 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:308156:308155:D YP_001933300.1|Treponema_pallidum_SS14_uid58977|prs NC_010741.1 upstream YP_001933301.1 D 309422 309439 GGTAGCGTCGCAACGGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:309422:309439:D YP_001933301.1|Treponema_pallidum_SS14_uid58977|xylB NC_010741.1 upstream YP_001933302.1 D 310685 310769 TCAGCGCAAGATACGCAGGAATATCGGGTGTTCAGCACATTCTGAACACTTGAGGACGGTGCGTGTTTGACGTTACGCTCTCGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:310685:310769:D YP_001933302.1|Treponema_pallidum_SS14_uid58977|TPASS_0296 NC_010741.1 upstream YP_001933303.1 D 311369 311368 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:311369:311368:D YP_001933303.1|Treponema_pallidum_SS14_uid58977|TPASS_0297 NC_010741.1 upstream YP_001933304.1 D 312182 312313 TCTTTCTCCTTCTCTCTGGGTGGTGCAATGCGTTTGGGGGCAGGGGTGAGGAGTAGTGCTCTGGTCTTTTCAGGCTGTGGGTGCCGGTAGGGTGCACCCTACGCGAGAGAGGGATTTTTGGGGGGAGGTGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:312182:312313:D YP_001933304.1|Treponema_pallidum_SS14_uid58977|tpn38b NC_010741.1 upstream YP_001933305.1 D 313342 313341 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:313342:313341:D YP_001933305.1|Treponema_pallidum_SS14_uid58977|TPASS_0299 NC_010741.1 upstream YP_001933306.1 D 313551 313550 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:313551:313550:D YP_001933306.1|Treponema_pallidum_SS14_uid58977|rbsA1 NC_010741.1 upstream YP_001933307.1 D 315098 315097 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:315098:315097:D YP_001933307.1|Treponema_pallidum_SS14_uid58977|TPASS_0301 NC_010741.1 upstream YP_001933308.1 D 316222 316221 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:316222:316221:D YP_001933308.1|Treponema_pallidum_SS14_uid58977|TPASS_0302 NC_010741.1 upstream YP_001933309.1 R 319097 319108 GAAGGTTCCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:319097:319108:R YP_001933309.1|Treponema_pallidum_SS14_uid58977|mutL NC_010741.1 upstream YP_001933310.1 R 322226 322225 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:322226:322225:R YP_001933310.1|Treponema_pallidum_SS14_uid58977|TPASS_0304 NC_010741.1 upstream YP_001933311.1 D 322152 322151 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:322152:322151:D YP_001933311.1|Treponema_pallidum_SS14_uid58977|pyrG NC_010741.1 upstream YP_001933312.1 D 323886 324049 CGCGCGCAGGTATTTTTTCTAGACTCCTCTGTCCTTCTCAGCCGGTTGAAAGAGCTTTGTGTGGGCGTGCGGGTTTTGTTTGCGCGCGCTCCGATGCGGTTGCAGGTTTGAGGGAGTGGATATCCGTTTTGTGGGGAGGGATGCGGCATGCAGGGAGTTATGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:323886:324049:D YP_001933312.1|Treponema_pallidum_SS14_uid58977|rpsD NC_010741.1 upstream YP_001933313.1 D 324665 324750 GATCCTTTGCCACTTTAGCTGGCGTTGCTCAATTATCTCCCAAGTCTTACCAGGGACTTTGGGGCGTGGAAGGATGGCGGCGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:324665:324750:D YP_001933313.1|Treponema_pallidum_SS14_uid58977|TPASS_0307 NC_010741.1 upstream YP_001933314.1 D 325754 325753 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:325754:325753:D YP_001933314.1|Treponema_pallidum_SS14_uid58977|hisJ NC_010741.1 upstream YP_001933315.1 D 326720 326784 AGGTGCAAGGCAGCGGTGCGTTTTTTGCACTGCGCTTTTTTTGCGTGTGTGCAGGGGTGGGGGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:326720:326784:D YP_001933315.1|Treponema_pallidum_SS14_uid58977|TPASS_0309 NC_010741.1 upstream YP_001933316.1 D 327572 327571 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:327572:327571:D YP_001933316.1|Treponema_pallidum_SS14_uid58977|TPASS_0310 NC_010741.1 upstream YP_001933317.1 R 328078 328077 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:328078:328077:R YP_001933317.1|Treponema_pallidum_SS14_uid58977|TPASS_0311 NC_010741.1 upstream YP_001933318.1 D 328061 328060 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:328061:328060:D YP_001933318.1|Treponema_pallidum_SS14_uid58977|TPASS_0312 NC_010741.1 upstream YP_001933319.1 D 329075 329164 GCAGGTGCAAGGAGTGGTGAGTTTTTGCGTGTGTGCAGGTGGCAGGGTGAGGGGGCTACTAGACAGGGCCGGGGGGGGGGGTGAGGTAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:329075:329164:D YP_001933319.1|Treponema_pallidum_SS14_uid58977|tprE NC_010741.1 upstream YP_001933320.1 R 331657 331678 AGGGGTCTGTCAGAACTATGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:331657:331678:R YP_001933320.1|Treponema_pallidum_SS14_uid58977|TPASS_0314 NC_010741.1 upstream YP_001933321.1 R 332327 332726 ACCAGGCGCCGGCTTCCGCTTCTCCTTCGCCCTCGACGCCGGTAACCAACACCAGGACCCTGCCGATGCAGGTAATCGCCTTCTGGCAACGGGGAGCTCACGGGAGAAGTTTGACAGCGCGTTCGATGCCCTCAGGGTGGAGCAATACCGTGTAAAGGATAAGTATCTTGAATTTTTGCTGGGACAGATGGCGGAGTCCTCGATTCTCGAGCGGGTGGGGCTTGCCCTCACGCTGCAGGACGGTACGCTCGTCTCTACGCTGACGAAGGTTGCCACTGATAGTGGAGCTCAGCGCCCAGTGGGAACAGGGGGTGCTTGCTGACGCTCCTTACATGGGTATTGCCGAGAGTATGTGGTCTGAGCGTTACTTTGGCACGTTTATCTGTGGGGTGAAGGTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:332327:332726:R YP_001933321.1|Treponema_pallidum_SS14_uid58977|TPASS_0315 NC_010741.1 upstream YP_001933322.1 R 335844 335843 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:335844:335843:R YP_001933322.1|Treponema_pallidum_SS14_uid58977|tprG NC_010741.1 upstream YP_001933323.1 R 335975 336002 AAGAATCCTCCCCCCTTTATCGACAAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:335975:336002:R YP_001933323.1|Treponema_pallidum_SS14_uid58977|TPASS_0318 NC_010741.1 upstream YP_001933324.1 D 335975 336002 GTTTGTCGATAAAGGGGGGAGGATTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:335975:336002:D YP_001933324.1|Treponema_pallidum_SS14_uid58977|tmpC NC_010741.1 upstream YP_001933325.1 D 337065 337073 GGGGGAGAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:337065:337073:D YP_001933325.1|Treponema_pallidum_SS14_uid58977|TPASS_0320 NC_010741.1 upstream YP_001933326.1 D 337230 337304 AGTGGGGCGTGTGTCTCGACCCGCCCGTGGTCAGTGGGTATGGGGACGTCCAGTAATGAACTTGAGGGAGGGGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:337230:337304:D YP_001933326.1|Treponema_pallidum_SS14_uid58977|rbsA2 NC_010741.1 upstream YP_001933327.1 D 338816 338815 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:338816:338815:D YP_001933327.1|Treponema_pallidum_SS14_uid58977|rbsC1 NC_010741.1 upstream YP_001933328.1 D 340015 340014 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:340015:340014:D YP_001933328.1|Treponema_pallidum_SS14_uid58977|rbsC2 NC_010741.1 upstream YP_001933329.1 D 340966 341068 TTTTTGGAAGAAGGGTGAGTTGGGTGGCACCTATTCTTTGCAATGAGCACCCGGGTAGGGGGTTCTGTATTCCGGGCGCGTTTTTTGCTACACTTAGCGGGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:340966:341068:D YP_001933329.1|Treponema_pallidum_SS14_uid58977|TPASS_0324 NC_010741.1 upstream YP_001933330.1 D 342508 342507 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:342508:342507:D YP_001933330.1|Treponema_pallidum_SS14_uid58977|TPASS_0325 NC_010741.1 upstream YP_001933331.1 D 345456 345455 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:345456:345455:D YP_001933331.1|Treponema_pallidum_SS14_uid58977|TPASS_0326 NC_010741.1 upstream YP_001933332.1 D 348018 348073 CGTTCCGTGCCCGTTTTGAAACGGTCCGGGGCTGCGTCCACCAGGCAAGGAGTGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:348018:348073:D YP_001933332.1|Treponema_pallidum_SS14_uid58977|ompH NC_010741.1 upstream YP_001933333.1 D 348593 348647 TGCACCGTGAGCACCGCGTCTCCTGCCTCCTACGTGTTGGCCCAGGAGCGTCCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:348593:348647:D YP_001933333.1|Treponema_pallidum_SS14_uid58977|mutS NC_010741.1 upstream YP_001933334.1 D 351351 351467 TGGTATGTTCCCCTGTTACGCACGACGGGTATCGGGCATGCGGCGCGCGGCGTTTTGTCCATTCTTTGCGCTAGAAACAGAGCGAACAATATTCTGCCTACCTGAGGAGAGAAAAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:351351:351467:D YP_001933334.1|Treponema_pallidum_SS14_uid58977|glyA NC_010741.1 upstream YP_001933335.1 R 354963 355026 TTCCTCCCTACCTCGTTGATTTTTCTGTTCTATACGCGCTATACTCGCCCCTCGGAGGGGTAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:354963:355026:R YP_001933335.1|Treponema_pallidum_SS14_uid58977|TPASS_0330 NC_010741.1 upstream YP_001933336.1 R 356659 356673 GCAGAGGAGGCACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:356659:356673:R YP_001933336.1|Treponema_pallidum_SS14_uid58977|gnd NC_010741.1 upstream YP_001933337.1 D 356659 356673 GCGTGCCTCCTCTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:356659:356673:D YP_001933337.1|Treponema_pallidum_SS14_uid58977|TPASS_0332 NC_010741.1 upstream YP_001933338.1 D 356800 356836 TTGACTTTTATTGCACGTTGTGCTCTGCTTGCCCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:356800:356836:D YP_001933338.1|Treponema_pallidum_SS14_uid58977|TPASS_0333 NC_010741.1 upstream YP_001933339.1 D 357530 357553 CCGCTGCCCCCAAAGGACGTGACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:357530:357553:D YP_001933339.1|Treponema_pallidum_SS14_uid58977|TPASS_0334 NC_010741.1 upstream YP_001933340.1 R 359311 359310 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:359311:359310:R YP_001933340.1|Treponema_pallidum_SS14_uid58977|TPASS_0335 NC_010741.1 upstream YP_001933341.1 D 359153 359152 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:359153:359152:D YP_001933341.1|Treponema_pallidum_SS14_uid58977|TPASS_0336 NC_010741.1 upstream YP_001933342.1 D 360834 360833 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:360834:360833:D YP_001933342.1|Treponema_pallidum_SS14_uid58977|ksgA NC_010741.1 upstream YP_001933343.1 D 361692 361708 TCCGGTGTGGGTGTTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:361692:361708:D YP_001933343.1|Treponema_pallidum_SS14_uid58977|TPASS_0338 NC_010741.1 upstream YP_001933344.1 D 362198 362208 AGGTGCACAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:362198:362208:D YP_001933344.1|Treponema_pallidum_SS14_uid58977|TPASS_0339 NC_010741.1 upstream YP_001933345.1 R 364663 364680 GGGCGGATTTTAGCTCAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:364663:364680:R YP_001933345.1|Treponema_pallidum_SS14_uid58977|folC NC_010741.1 upstream YP_001933346.1 D 364663 364680 TTGAGCTAAAATCCGCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:364663:364680:D YP_001933346.1|Treponema_pallidum_SS14_uid58977|murC NC_010741.1 upstream YP_001933347.1 D 366127 366246 AGTTCGGTTGCGGTTTCGCCAACATGGTGGTGGTGCCGGCTGTGGATCTGGTGGATATAGGGTGAAGTGAGACAGGCTGCGAATGGATGGTGATGCAAAGAGCGGAGTGCGGAGGGGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:366127:366246:D YP_001933347.1|Treponema_pallidum_SS14_uid58977|cmk NC_010741.1 upstream YP_001933348.1 D 366801 366800 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:366801:366800:D YP_001933348.1|Treponema_pallidum_SS14_uid58977|TPASS_0343 NC_010741.1 upstream YP_001933349.1 R 371062 371213 CAACTACTACCGGTGCTCCTTCCTGTTCTCCTCCCTTGCCCTCTCCTGCTGCATCCTTCTCGCTCAGGGACTAGCACAAGGCACAGTGCTCCGTTACACTCGGCCGTGTGTCAACACGCGCTCAAGAAATGCACGCTCGTACCCAGGAGCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:371062:371213:R YP_001933349.1|Treponema_pallidum_SS14_uid58977|trcF NC_010741.1 upstream YP_001933350.1 D 371062 371213 AGGCTCCTGGGTACGAGCGTGCATTTCTTGAGCGCGTGTTGACACACGGCCGAGTGTAACGGAGCACTGTGCCTTGTGCTAGTCCCTGAGCGAGAAGGATGCAGCAGGAGAGGGCAAGGGAGGAGAACAGGAAGGAGCACCGGTAGTAGTTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:371062:371213:D YP_001933350.1|Treponema_pallidum_SS14_uid58977|mraY NC_010741.1 upstream YP_001933351.1 D 372306 372461 AGGGAGGGCACCCCTTGCGGGGCACGCCGGGCCGAGCGAGGGCGACGGTGCGGAGTATCCGGCGCCTTGACGTGCGTTTATTTCTTTTGCTAGCCTGCCCCTAATTGCTTTCCGTTTCCGGAATGATGGTAGAGGAGACAGGGCGGAAGGCGTGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:372306:372461:D YP_001933351.1|Treponema_pallidum_SS14_uid58977|TPASS_0346 NC_010741.1 upstream YP_001933352.1 D 373132 373131 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:373132:373131:D YP_001933352.1|Treponema_pallidum_SS14_uid58977|TPASS_0347 NC_010741.1 upstream YP_001933353.1 R 375106 375105 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:375106:375105:R YP_001933353.1|Treponema_pallidum_SS14_uid58977|TPASS_0348 NC_010741.1 upstream YP_001933354.1 R 375606 375818 AATGGGGTATCTCACTTAAGGCTTAAGAGAAAATTTTACTCGAACGCGACGCCCCCTCTTTTACCGCACAGCACCGCGCAAGAGGGCAAGAAGTGGACCACACGCTCCCAACACCTCGCCCGGCTTATCCCCTATAACGGCGATTCTGTCAAGGGCACACGGCACAGAAACTGCCCTTGCCGTGAGTATCTTGCCTGTGCTAGCATGCCGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:375606:375818:R YP_001933354.1|Treponema_pallidum_SS14_uid58977|slyD NC_010741.1 upstream YP_001933355.1 D 375606 375818 GCGCGGCATGCTAGCACAGGCAAGATACTCACGGCAAGGGCAGTTTCTGTGCCGTGTGCCCTTGACAGAATCGCCGTTATAGGGGATAAGCCGGGCGAGGTGTTGGGAGCGTGTGGTCCACTTCTTGCCCTCTTGCGCGGTGCTGTGCGGTAAAAGAGGGGGCGTCGCGTTCGAGTAAAATTTTCTCTTAAGCCTTAAGTGAGATACCCCATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:375606:375818:D YP_001933355.1|Treponema_pallidum_SS14_uid58977|proA NC_010741.1 upstream YP_001933356.1 D 377102 377101 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:377102:377101:D YP_001933356.1|Treponema_pallidum_SS14_uid58977|proB NC_010741.1 upstream YP_001933357.1 D 377993 378123 AGAGCGACGTGGGTATGCGCAAGTGCACGCATTGTGCCCTATAATGCGCGGCGTGCGGTCAATTTCTGACGTGTAATTTTTCTCGGTGGGGCGACGTCTCCGTCTGTCTGTTAATTCGGTGGTGTGTTTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:377993:378123:D YP_001933357.1|Treponema_pallidum_SS14_uid58977|TPASS_0352 NC_010741.1 upstream YP_001933358.1 R 378888 379149 CTGTGCCCTCTCCGTGTTAGCTTTCCTCTAAAAACAGTGCAGCATGTACACCCGAGGAGAAAGTGCAACGCGCACGTGTACACCGCCTTGCAGAATAAGACAGCGTACCGCAAAAACCAAACCGTCGTCCCGCGTACCAAAGTTCCTGCACAATCCGTGCGCGCCTCATTCTCCCTCCTTGCGAAAATATCTTCGCTCCATCACCAACTGTCGGACCAATACATTGTCCCCACGGCGCAAAACTGTTACCGTAGGCGCGACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:378888:379149:R YP_001933358.1|Treponema_pallidum_SS14_uid58977|rnhA NC_010741.1 upstream YP_001933359.1 D 378888 379149 AGTCGCGCCTACGGTAACAGTTTTGCGCCGTGGGGACAATGTATTGGTCCGACAGTTGGTGATGGAGCGAAGATATTTTCGCAAGGAGGGAGAATGAGGCGCGCACGGATTGTGCAGGAACTTTGGTACGCGGGACGACGGTTTGGTTTTTGCGGTACGCTGTCTTATTCTGCAAGGCGGTGTACACGTGCGCGTTGCACTTTCTCCTCGGGTGTACATGCTGCACTGTTTTTAGAGGAAAGCTAACACGGAGAGGGCACAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:378888:379149:D YP_001933359.1|Treponema_pallidum_SS14_uid58977|tmk NC_010741.1 upstream YP_001933360.1 R 380127 380330 ACGGAGGAGGTTTCGCGAGACTCTTAACGGTGCTATGGGAGTGTCTTATGCATCACACGCGGCCAGAAAAGAATAGTCACGCTTGGTGGATCCTAACATGGCAACCAGACCCCGTCAAGCATCTATCTATATGGCCCGTTCACGCGCCGTACACGCAACAGTGAAGACACACAGACGAAAGGAAGCGTCAATAGCCTGTACCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:380127:380330:R YP_001933360.1|Treponema_pallidum_SS14_uid58977|TPASS_0355 NC_010741.1 upstream YP_001933361.1 D 380127 380330 GGGGTACAGGCTATTGACGCTTCCTTTCGTCTGTGTGTCTTCACTGTTGCGTGTACGGCGCGTGAACGGGCCATATAGATAGATGCTTGACGGGGTCTGGTTGCCATGTTAGGATCCACCAAGCGTGACTATTCTTTTCTGGCCGCGTGTGATGCATAAGACACTCCCATAGCACCGTTAAGAGTCTCGCGAAACCTCCTCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:380127:380330:D YP_001933361.1|Treponema_pallidum_SS14_uid58977|TPASS_0356 NC_010741.1 upstream YP_001933362.1 D 380649 380749 TGGAGGATGGGGAGGACTTTCCATCGTGGCGCATGTTTTTGGCGTAAGGTGCTTTCGCGTGCGTTATCTCATTTCTCGTCGTCTTTTGGTTCTCCCCGTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:380649:380749:D YP_001933362.1|Treponema_pallidum_SS14_uid58977|birA NC_010741.1 upstream YP_001933363.1 R 383076 383086 GTGGGACCTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:383076:383086:R YP_001933363.1|Treponema_pallidum_SS14_uid58977|TPASS_0358 NC_010741.1 upstream YP_001933364.1 R 383723 383932 ACCTCCTAGTAGCTCGCTCGCCAGGCTGCATCACATTGTCCTTTTGGTCAAGCGTATGGCGAATTCTAGGGGGAAGACACGACACTCGCCCCGCCTACCGGCGGTACGTACTCTCTGCATCGCGATATAGAACCGTGGAATGAGAAAAAATGGCCTCATATTGACAGAGATTTTTCCTGTTCCCATAATGGCACCCTGGGTGGGGTAGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:383723:383932:R YP_001933364.1|Treponema_pallidum_SS14_uid58977|TPASS_0359 NC_010741.1 upstream YP_001933365.1 D 383723 383932 GCCTACCCCACCCAGGGTGCCATTATGGGAACAGGAAAAATCTCTGTCAATATGAGGCCATTTTTTCTCATTCCACGGTTCTATATCGCGATGCAGAGAGTACGTACCGCCGGTAGGCGGGGCGAGTGTCGTGTCTTCCCCCTAGAATTCGCCATACGCTTGACCAAAAGGACAATGTGATGCAGCCTGGCGAGCGAGCTACTAGGAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:383723:383932:D YP_001933365.1|Treponema_pallidum_SS14_uid58977|TPASS_0360 NC_010741.1 upstream YP_001933366.1 R 384955 385029 CGTTCATGTCTCCGCCGCCGATGATAAAGAAAAGGTCCGCCAGAGTAAAGGCGCGCACGCGCGCTTTATGGCATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:384955:385029:R YP_001933366.1|Treponema_pallidum_SS14_uid58977|TPASS_0361 NC_010741.1 upstream YP_001933367.1 D 384955 385029 TATGCCATAAAGCGCGCGTGCGCGCCTTTACTCTGGCGGACCTTTTCTTTATCATCGGCGGCGGAGACATGAACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:384955:385029:D YP_001933367.1|Treponema_pallidum_SS14_uid58977|rpmB NC_010741.1 upstream YP_001933368.1 D 385358 385757 GTCGCCGCGGACCAGAGAACGACGGGGGCTATCCACATCGTGCTGTCGTCTCTGAAGGTGCGCACGTCCCGAACGGTCAAGAGCACCGCGCCGAGGAAGAGGCTGGCGTGTCCGCCAATCGATACCCAAGACGACCGCGCGTGGGTAGAAAGCTGCGAGAGGGTCTGGTTTTGATAAAAGTGGATCCAAACGTAGACCCCCACCGCTCGGTAGAGGAGTAGGACCAGTCCCGCGGCATACAAGGAGTAACCACCGAGGGCGAGAAACCGACCTGACAAACGTACCTGCGCGCGGGCCATGGCGGAGTCTATTCTCGGCTGATGGAAGTGTCAAGGGATGCAGCGGGTGGCGGGGTCTTTTGGACGTTGCCTTGACCAAAGGCTGAGAATGCGGGAAGATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:385358:385757:D YP_001933368.1|Treponema_pallidum_SS14_uid58977|cheA NC_010741.1 upstream YP_001933369.1 D 388190 388189 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:388190:388189:D YP_001933369.1|Treponema_pallidum_SS14_uid58977|cheW1 NC_010741.1 upstream YP_001933370.1 D 389558 389578 TTAGCGCATGAGGAGTGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:389558:389578:D YP_001933370.1|Treponema_pallidum_SS14_uid58977|cheX NC_010741.1 upstream YP_001933371.1 D 390044 390055 GAGGGAGGAAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:390044:390055:D YP_001933371.1|Treponema_pallidum_SS14_uid58977|cheY NC_010741.1 upstream YP_001933372.1 D 390491 390793 GGGCGGATGTGTCCTGCGGGCTGTCTCGTACGGTTTGCCCGCTTGCGTGTGTGGATGGTTTCTTGAGGTTTTTGCCTTCGCGCGCGGAGTGCCCGTCTCTCTGCGTGCGTGTTTTCTGTGTGTGTGCCGCAAGAGGAGAAGTGGTGTCTCCCTCAGCCCTTTGCTCGGGGCCCTGTGGTGCCTTTCCTGCGGTGTAGTTTCTATACTCCTTCGTAGTTCCTAGTTGGTTTGGTTGGAAAGGGTTCGGTTCGATTTTGAAGAGGTGCACACGTTGTATTGTGCGCATGAAAGAGGGAGCGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:390491:390793:D YP_001933372.1|Treponema_pallidum_SS14_uid58977|TPASS_0367 NC_010741.1 upstream YP_001933373.1 D 393619 393618 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:393619:393618:D YP_001933373.1|Treponema_pallidum_SS14_uid58977|TPASS_0368 NC_010741.1 upstream YP_001933374.1 D 393951 393950 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:393951:393950:D YP_001933374.1|Treponema_pallidum_SS14_uid58977|TPASS_0369 NC_010741.1 upstream YP_001933375.1 R 395986 395985 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:395986:395985:R YP_001933375.1|Treponema_pallidum_SS14_uid58977|TPASS_0370 NC_010741.1 upstream YP_001933376.1 D 395959 395958 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:395959:395958:D YP_001933376.1|Treponema_pallidum_SS14_uid58977|TPASS_0371 NC_010741.1 upstream YP_001933377.1 D 396916 396955 TTTGCGGCGTGTTCGCTTTCTGTGCATGGAGGATTGGATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:396916:396955:D YP_001933377.1|Treponema_pallidum_SS14_uid58977|ctc NC_010741.1 upstream YP_001933378.1 D 397547 397605 ATGGTGCGCGGTGTAACGCGCGCGGTGCGGCACACTGTGCAGCGTGCCCGTCTTTATAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:397547:397605:D YP_001933378.1|Treponema_pallidum_SS14_uid58977|TPASS_0373 NC_010741.1 upstream YP_001933379.1 D 398975 398974 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:398975:398974:D YP_001933379.1|Treponema_pallidum_SS14_uid58977|TPASS_0374 NC_010741.1 upstream YP_001933380.1 D 401351 401507 GGCCCGGCGATCCCTCTGCTGGGGACTCAGTCCGGTGCGATCACGATTTGCCAGTTTCGATATAACTGTAGGGGTGTACTTTGAAATGCCGAAGTAGTGGGAGACCCTGTCTTCCGCGCGTGTAATGAGAAACGCCCCTATCTGGCTGAGAAAGTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:401351:401507:D YP_001933380.1|Treponema_pallidum_SS14_uid58977|TPASS_0375 NC_010741.1 upstream YP_001933381.1 R 402939 403006 TCACTGCACAGCGATAAAGACTTGCTTGACAGCACCCTTGTACCCTCGTACACTGGGGGCGGGCATGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:402939:403006:R YP_001933381.1|Treponema_pallidum_SS14_uid58977|TPASS_0376 NC_010741.1 upstream YP_001933382.1 D 402939 403006 CCATGCCCGCCCCCAGTGTACGAGGGTACAAGGGTGCTGTCAAGCAAGTCTTTATCGCTGTGCAGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:402939:403006:D YP_001933382.1|Treponema_pallidum_SS14_uid58977|TPASS_0377 NC_010741.1 upstream YP_001933383.1 D 403129 403128 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:403129:403128:D YP_001933383.1|Treponema_pallidum_SS14_uid58977|TPASS_0378 NC_010741.1 upstream YP_001933384.1 R 406335 406440 AGGATACTCCGTGCAGAGTCCTCCCTGTGTGTGTGAGGGGGGGGGGAGGAGGGGGTGACCGTGCGGTCTCCCTTGTTTTTTTGGTTCAAGACCGCTACAGTACTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:406335:406440:R YP_001933384.1|Treponema_pallidum_SS14_uid58977|secA NC_010741.1 upstream YP_001933385.1 R 408262 408398 CTGCTCGCTGTGGTTCCATCGGACCCTTCTGCCAAGGCAGAGGGCACGCGTGCCGTTGGGACATCGTGGTGGAGTTGCAGCGCGCTTGCGTCACACGGCCTTACTCCGCGGTCAACGCGAACGTATAATGGTGCGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:408262:408398:R YP_001933385.1|Treponema_pallidum_SS14_uid58977|TPASS_0380 NC_010741.1 upstream YP_001933386.1 R 409116 409198 CCTATCGCAAAAATTTACTGGACAACCGGCAACGGTATGGGTGACAATGTTCTTTTTCTCGTCGGGGGGGGGGGGGTGGACGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:409116:409198:R YP_001933386.1|Treponema_pallidum_SS14_uid58977|TPASS_0381 NC_010741.1 upstream YP_001933387.1 D 409116 409198 ACGTCCACCCCCCCCCCCCCGACGAGAAAAAGAACATTGTCACCCATACCGTTGCCGGTTGTCCAGTAAATTTTTGCGATAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:409116:409198:D YP_001933387.1|Treponema_pallidum_SS14_uid58977|TPASS_0382 NC_010741.1 upstream YP_001933388.1 D 409322 409348 GAAAAATATAGGGGAAGGTAGGAAATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:409322:409348:D YP_001933388.1|Treponema_pallidum_SS14_uid58977|TPASS_0383 NC_010741.1 upstream YP_001933389.1 D 409795 409794 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:409795:409794:D YP_001933389.1|Treponema_pallidum_SS14_uid58977|TPASS_0384 NC_010741.1 upstream YP_001933390.1 D 410935 410946 GAGACTGGGCTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:410935:410946:D YP_001933390.1|Treponema_pallidum_SS14_uid58977|TPASS_0385 NC_010741.1 upstream YP_001933391.1 D 411305 411304 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:411305:411304:D YP_001933391.1|Treponema_pallidum_SS14_uid58977|murF NC_010741.1 upstream YP_001933392.1 D 412681 412680 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:412681:412680:D YP_001933392.1|Treponema_pallidum_SS14_uid58977|ftsW NC_010741.1 upstream YP_001933393.1 D 413813 413812 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:413813:413812:D YP_001933393.1|Treponema_pallidum_SS14_uid58977|ftsQ NC_010741.1 upstream YP_001933394.1 D 414629 414640 AAGAGGAAAGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:414629:414640:D YP_001933394.1|Treponema_pallidum_SS14_uid58977|ftsA NC_010741.1 upstream YP_001933395.1 D 415886 415930 ACCGCGCACAGCATGCGGCACGCGGTGTAGGGGAATGGGAGGGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:415886:415930:D YP_001933395.1|Treponema_pallidum_SS14_uid58977|ftsZ NC_010741.1 upstream YP_001933396.1 D 417184 417183 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:417184:417183:D YP_001933396.1|Treponema_pallidum_SS14_uid58977|codV NC_010741.1 upstream YP_001933397.1 D 417887 417886 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:417887:417886:D YP_001933397.1|Treponema_pallidum_SS14_uid58977|TPASS_0392 NC_010741.1 upstream YP_001933398.1 D 418843 418842 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:418843:418842:D YP_001933398.1|Treponema_pallidum_SS14_uid58977|smf NC_010741.1 upstream YP_001933399.1 D 419752 419783 GACAGTTTCGGTAAGCATAGGGGGCGGAAAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:419752:419783:D YP_001933399.1|Treponema_pallidum_SS14_uid58977|topA NC_010741.1 upstream YP_001933400.1 D 421972 421971 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:421972:421971:D YP_001933400.1|Treponema_pallidum_SS14_uid58977|xprB NC_010741.1 upstream YP_001933401.1 D 422866 423012 GGGGTAGGAACGGAGCGTCCAAACGATGCGGGGAAGCGAGCTGCAGAGAATGTACACCAGTGCGAAGTGCTTTTTTCTGAGACTTTTTTGAAGAAGACTTTCTTAAGCTCGCTTTTTTTTGGTCGACAATGGGTCGGGGGTAGTCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:422866:423012:D YP_001933401.1|Treponema_pallidum_SS14_uid58977|flgB NC_010741.1 upstream YP_001933402.1 D 423424 423507 GCGTATGGAGAAGCGTGATGGGTTTGTTTAGTGGTATCAATATTGCCGCGACGGGTATGAGCGCGCAGCGCTTGGCGGGCCGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:423424:423507:D YP_001933402.1|Treponema_pallidum_SS14_uid58977|flgC NC_010741.1 upstream YP_001933403.1 D 423898 423952 GTGTGTTGCGCGTACAGTCTGTGAAGATGTCTGTGCTGTGTGAGGGGAGGATACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:423898:423952:D YP_001933403.1|Treponema_pallidum_SS14_uid58977|fliE NC_010741.1 upstream YP_001933404.1 D 424328 424443 GGTTTACAAGGCCGGGCTGTTCTGCAAAAAGAGTACCGACGGTATATCAGGTGAAAAGAGGGTGGGACGCGCTTAGTGCGCATTGGCTCGTTCTATAGTGAGGGGAGGGGACACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:424328:424443:D YP_001933404.1|Treponema_pallidum_SS14_uid58977|fliF NC_010741.1 upstream YP_001933405.1 D 426148 426151 TACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:426148:426151:D YP_001933405.1|Treponema_pallidum_SS14_uid58977|fliG NC_010741.1 upstream YP_001933406.1 D 427211 427257 ATGTTGTTCCTGATAAGCGATATGGGGTTCGAAAGGAAGCAGACAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:427211:427257:D YP_001933406.1|Treponema_pallidum_SS14_uid58977|fliH NC_010741.1 upstream YP_001933407.1 D 428188 428214 TAGAGAAAGAGGCGTGGGTGTGCGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:428188:428214:D YP_001933407.1|Treponema_pallidum_SS14_uid58977|fliI NC_010741.1 upstream YP_001933408.1 D 429559 429586 ATCTGCAAGAGCAGAGGAGATAGCGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:429559:429586:D YP_001933408.1|Treponema_pallidum_SS14_uid58977|TPASS_0403 NC_010741.1 upstream YP_001933409.1 R 430570 430569 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:430570:430569:R YP_001933409.1|Treponema_pallidum_SS14_uid58977|TPASS_0404 NC_010741.1 upstream YP_001933410.1 R 431016 431205 AGACATCATCCTAGCCTGTTCTTTGAAAAATTTCACAGGAACCGTGTTATCCCCAGGTCCTGCACACCGCATACATTGACACCACACCCGTCCAGCCCGTATAAGCTTTGCGCGCATGTTCGAACCCACACCGTATTGCTCTACGTCGGACTTTGCTAAGCTCATGCATACGTCAACACACATACACGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:431016:431205:R YP_001933410.1|Treponema_pallidum_SS14_uid58977|TPASS_0405 NC_010741.1 upstream YP_001933411.1 D 431016 431205 GCCGTGTATGTGTGTTGACGTATGCATGAGCTTAGCAAAGTCCGACGTAGAGCAATACGGTGTGGGTTCGAACATGCGCGCAAAGCTTATACGGGCTGGACGGGTGTGGTGTCAATGTATGCGGTGTGCAGGACCTGGGGATAACACGGTTCCTGTGAAATTTTTCAAAGAACAGGCTAGGATGATGTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:431016:431205:D YP_001933411.1|Treponema_pallidum_SS14_uid58977|murI NC_010741.1 upstream YP_001933412.1 D 432013 432139 ACACGGCACTGGATATCGGGTGCGTGCACTGTGTGTGTTTGTGTGGAGGCGGTAGATAAGAGAGGCTGATAGACAGCGCGGTGCTGCGTGCGTACAATGGGCCATGGGGAAGCCGAGGTTTCGTGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:432013:432139:D YP_001933412.1|Treponema_pallidum_SS14_uid58977|gph1 NC_010741.1 upstream YP_001933413.1 D 432815 432892 TCTGCCGAACCCCACACGTCCAGCGTGGCGCCCGCGGGTACCCGCTGTGCGTCGCGTGAAGACGAAGGTGAGTGGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:432815:432892:D YP_001933413.1|Treponema_pallidum_SS14_uid58977|TPASS_0408 NC_010741.1 upstream YP_001933414.1 D 436148 436186 GATTAATGCAGCGCACGCGCGCGTTGGTAAAGAAGAGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:436148:436186:D YP_001933414.1|Treponema_pallidum_SS14_uid58977|TPASS_0409 NC_010741.1 upstream YP_001933415.1 D 436373 436636 TCTGCGGGAACAGAAAAGGACGCAGGCTCTTATTAAGAACATAAAAAAGGGTGATCCTGTCGTTACTATCGGCGGTATCCACGGGGTGGTAAGCGTGGTGCGGGAGCACAGCCTTGTCATAAAGGTGAATGAGCATGGCACGCTCGAAGTCAGCCGCAGTGCGATTGCGCGCATAAACGACAGGAGAGGTGTTTCGAATCCTAAGACAGATTGCGATTCGAAGCCCGGCGTGCCCCTGACAGGTGTGGACAAGGAGATCGCCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:436373:436636:D YP_001933415.1|Treponema_pallidum_SS14_uid58977|secD NC_010741.1 upstream YP_001933416.1 D 438385 438384 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:438385:438384:D YP_001933416.1|Treponema_pallidum_SS14_uid58977|secF NC_010741.1 upstream YP_001933417.1 R 440029 440046 GCAGAAGGAAGGTACAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:440029:440046:R YP_001933417.1|Treponema_pallidum_SS14_uid58977|TPASS_0412 NC_010741.1 upstream YP_001933418.1 R 441946 442047 TCCTACCTCTCCCCCGCCCCTACACCCGACCACACCTGATTTCATCCTGTCAAGACCACCACCTCCCTTGCACTTCCTTCACCCGCGCCCTATCCTCCGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:441946:442047:R YP_001933418.1|Treponema_pallidum_SS14_uid58977|TPASS_0413 NC_010741.1 upstream YP_001933419.1 D 441946 442047 GCGCGGAGGATAGGGCGCGGGTGAAGGAAGTGCAAGGGAGGTGGTGGTCTTGACAGGATGAAATCAGGTGTGGTCGGGTGTAGGGGCGGGGGAGAGGTAGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:441946:442047:D YP_001933419.1|Treponema_pallidum_SS14_uid58977|dagA NC_010741.1 upstream YP_001933420.1 D 443384 443383 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:443384:443383:D YP_001933420.1|Treponema_pallidum_SS14_uid58977|TPASS_0415 NC_010741.1 upstream YP_001933421.1 R 445223 445222 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:445223:445222:R YP_001933421.1|Treponema_pallidum_SS14_uid58977|ffh NC_010741.1 upstream YP_001933422.1 R 446895 446920 AAATGCTTTTCTGGCAGGGGAAAGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:446895:446920:R YP_001933422.1|Treponema_pallidum_SS14_uid58977|lnt NC_010741.1 upstream YP_001933423.1 D 446895 446920 AACTTTCCCCTGCCAGAAAAGCATTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:446895:446920:D YP_001933423.1|Treponema_pallidum_SS14_uid58977|TPASS_0418 NC_010741.1 upstream YP_001933424.1 D 448111 448110 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:448111:448110:D YP_001933424.1|Treponema_pallidum_SS14_uid58977|TPASS_0419 NC_010741.1 upstream YP_001933425.1 D 448655 448654 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:448655:448654:D YP_001933425.1|Treponema_pallidum_SS14_uid58977|TPASS_0420 NC_010741.1 upstream YP_001933426.1 D 448883 449015 GGATAGGGCGTGGTGTGCGTCTGTTCGAGGTAGTCTCTTTGTCTTGGCCTGCGTGCTCCTTTTTTCTCTCTGCTTTTTGTTTGTGCACCTTTTGTGAGCTTTCTGGAGAAAGAAGAGACTGCGCTGAAAGGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:448883:449015:D YP_001933426.1|Treponema_pallidum_SS14_uid58977|TPASS_0421 NC_010741.1 upstream YP_001933427.1 D 451051 451050 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:451051:451050:D YP_001933427.1|Treponema_pallidum_SS14_uid58977|TPASS_0422 NC_010741.1 upstream YP_001933428.1 D 452077 452100 CTGTCATGGGGAAAGCGAATTTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:452077:452100:D YP_001933428.1|Treponema_pallidum_SS14_uid58977|TPASS_0423 NC_010741.1 upstream YP_001933429.1 D 452908 453109 GAGAGCGATGACAGGAGAGGCAGTAGTTTGTCCCGTAGCGTGTGGAGCCGGATGGTCGAAGTGTGTTATGCTTGTCCCGGTGGGGACTTTTTAGTATACTCGGAGGGCTGCGAGGAGAACGTATAGTGGAGATTCAACTGCAAGATCTGATTGACCGAATTAAGCGCGAAGCGTTGCCTCTTCCGAGGAGCAGGCGTCTCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:452908:453109:D YP_001933429.1|Treponema_pallidum_SS14_uid58977|TPASS_0424 NC_010741.1 upstream YP_001933430.1 D 453786 453785 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:453786:453785:D YP_001933430.1|Treponema_pallidum_SS14_uid58977|TPASS_0425 NC_010741.1 upstream YP_001933431.1 D 454047 454187 GCCGCTTGACCCGTTTTCCTCAGAGGCAGTGTTTTTGTACGGGCTGCAGCTGATGTTGCTTACGCATCGGTCGCGTTTCACAATGCAGGCGGGGTCCAAAGCATACGCAGCTCTTTATTATACAATTCTTGGAGCATATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:454047:454187:D YP_001933431.1|Treponema_pallidum_SS14_uid58977|atpA1 NC_010741.1 upstream YP_001933432.1 D 455958 455960 ACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:455958:455960:D YP_001933432.1|Treponema_pallidum_SS14_uid58977|atpB1 NC_010741.1 upstream YP_001933433.1 D 457254 457264 GGTGGTGACCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:457254:457264:D YP_001933433.1|Treponema_pallidum_SS14_uid58977|atpD1 NC_010741.1 upstream YP_001933434.1 D 457882 457881 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:457882:457881:D YP_001933434.1|Treponema_pallidum_SS14_uid58977|atpI1 NC_010741.1 upstream YP_001933435.1 D 459751 459786 CATAGAAAGAGGTAGAAAAAGAGTGGAGGGCTCGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:459751:459786:D YP_001933435.1|Treponema_pallidum_SS14_uid58977|atpK1 NC_010741.1 upstream YP_001933436.1 D 460210 460242 ATGTGGTGAACGTTGTGGTATAGCGCTTCGACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:460210:460242:D YP_001933436.1|Treponema_pallidum_SS14_uid58977|TPASS_0431 NC_010741.1 upstream YP_001933437.1 D 461065 461106 GGAAACTGTTATCCGCGCTCCCCATCTTCCGATACTGGATCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:461065:461106:D YP_001933437.1|Treponema_pallidum_SS14_uid58977|TPASS_0432 NC_010741.1 upstream YP_001933438.1 D 461659 461712 AAAATAGGGAATACGTAAGGTGTCTGCAGCGTCGCTTCAGCTGGGAGGAGTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:461659:461712:D YP_001933438.1|Treponema_pallidum_SS14_uid58977|arp NC_010741.1 upstream YP_001933439.1 R 464095 464224 ACCCCACGTTTGCCCCGCGTGCGCGGTGGCCTGCGCTCTTCTCTCACTTTTGGCAAGAGGGAGCGTAACTTTTGCATCGTTGGGCTTTTCTCCCCTGAGTCTTACAGACGTGACAAGGGGGTTTTCTGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:464095:464224:R YP_001933439.1|Treponema_pallidum_SS14_uid58977|tpp17 NC_010741.1 upstream YP_001933440.1 R 465308 465307 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:465308:465307:R YP_001933440.1|Treponema_pallidum_SS14_uid58977|TPASS_0436 NC_010741.1 upstream YP_001933441.1 R 465804 465832 TTTTCACGGCGCAGTTACCTGCAAGGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:465804:465832:R YP_001933441.1|Treponema_pallidum_SS14_uid58977|TPASS_0437 NC_010741.1 upstream YP_001933442.1 D 465804 465832 GCTCCTTGCAGGTAACTGCGCCGTGAAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:465804:465832:D YP_001933442.1|Treponema_pallidum_SS14_uid58977|TPASS_0438 NC_010741.1 upstream YP_001933443.1 D 466643 466728 TGCTCTGCAAGGTGCGTGAGCGAACGGAGTGCAGGACACGCGCTTGACTGCAGCTGAGAGGAGGGATTGTACGAAGACGATGTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:466643:466728:D YP_001933443.1|Treponema_pallidum_SS14_uid58977|cheW2 NC_010741.1 upstream YP_001933444.1 D 467242 467330 TGCCCCACCGCTGTCTGTCTCCTGCCTGCAGCTCCAAGCGCCGTGCGGGGTCCATCCCCGTCCACAGCCCCGCCATCCGAAGGTCCGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:467242:467330:D YP_001933444.1|Treponema_pallidum_SS14_uid58977|TPASS_0440 NC_010741.1 upstream YP_001933445.1 D 468479 468478 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:468479:468478:D YP_001933445.1|Treponema_pallidum_SS14_uid58977|TPASS_0441 NC_010741.1 upstream YP_001933446.1 D 469389 469388 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:469389:469388:D YP_001933446.1|Treponema_pallidum_SS14_uid58977|recN NC_010741.1 upstream YP_001933447.1 D 471052 471051 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:471052:471051:D YP_001933447.1|Treponema_pallidum_SS14_uid58977|TPASS_0443 NC_010741.1 upstream YP_001933448.1 D 471907 471911 GGTTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:471907:471911:D YP_001933448.1|Treponema_pallidum_SS14_uid58977|TPASS_0444 NC_010741.1 upstream YP_001933449.1 D 472941 473075 TTCTTCTATCCTAAGGTAGTGCTGCGCTCGCGGGGCGCACGGCTAGTACGTCGCTTTTGAACGGAGGACGATTATCCGTAGTCTGTGTGCGCGGGGTTGCACTGTTGCTGTAAGAACAGGTACGGGGGTGTTGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:472941:473075:D YP_001933449.1|Treponema_pallidum_SS14_uid58977|thiJ NC_010741.1 upstream YP_001933450.1 D 473706 473746 ATCAGAGGGACGAGCGTGCTGCGCGGCAGCCAGAGGAAAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:473706:473746:D YP_001933450.1|Treponema_pallidum_SS14_uid58977|gcpE NC_010741.1 upstream YP_001933451.1 D 474958 474957 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:474958:474957:D YP_001933451.1|Treponema_pallidum_SS14_uid58977|TPASS_0447 NC_010741.1 upstream YP_001933452.1 D 476083 476139 GTGGTGTAGGGTATAGCACACGCGCGAGGAACGTGAATTGGGGGATGAGGAGTTTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:476083:476139:D YP_001933452.1|Treponema_pallidum_SS14_uid58977|TPASS_0448 NC_010741.1 upstream YP_001933453.1 D 477223 477225 CTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:477223:477225:D YP_001933453.1|Treponema_pallidum_SS14_uid58977|TPASS_0449 NC_010741.1 upstream YP_001933454.1 D 477817 477952 TTTGTCACTGAATGCGCGTGCGGTGTAGCGTGCACTGTTTTACGTTTTAGGTATTCTCTTTCCCGCTGCTATGATGGTGGGGAGTAGTCCTGTGCACTGTTTTTTATCCGTACAGGTACGTGATAAAGAGGAAGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:477817:477952:D YP_001933454.1|Treponema_pallidum_SS14_uid58977|fusA1 NC_010741.1 upstream YP_001933455.1 R 480176 480453 ACAACCTCCGTTGCTCAGAATCGCATAAGGAGCGTAAGGCATTATATCATTTTCGTCCTTCCTTTTCCCCATACGTCTTATGACCGGCGCCACACCTTTCCCCACCTGCACCAGATACCCCACGTGTGCGTAATCGCACGTGCTCTGCCAATTACTGCATTGAGTATTACGTATGCAATAATGCCCCACATTACACCTTCTGCAATCGAATACGAAAAAGGCATCATCAGAACTGCGACGAAGGCAGGAAACCCTTCCCCACATCTTGAAAATCCACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:480176:480453:R YP_001933455.1|Treponema_pallidum_SS14_uid58977|TPASS_0451 NC_010741.1 upstream YP_001933456.1 D 480176 480453 TGTGGATTTTCAAGATGTGGGGAAGGGTTTCCTGCCTTCGTCGCAGTTCTGATGATGCCTTTTTCGTATTCGATTGCAGAAGGTGTAATGTGGGGCATTATTGCATACGTAATACTCAATGCAGTAATTGGCAGAGCACGTGCGATTACGCACACGTGGGGTATCTGGTGCAGGTGGGGAAAGGTGTGGCGCCGGTCATAAGACGTATGGGGAAAAGGAAGGACGAAAATGATATAATGCCTTACGCTCCTTATGCGATTCTGAGCAACGGAGGTTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:480176:480453:D YP_001933456.1|Treponema_pallidum_SS14_uid58977|ileS NC_010741.1 upstream YP_001933457.1 D 483716 483715 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:483716:483715:D YP_001933457.1|Treponema_pallidum_SS14_uid58977|TPASS_0453 NC_010741.1 upstream YP_001933458.1 R 485619 485618 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:485619:485618:R YP_001933458.1|Treponema_pallidum_SS14_uid58977|TPASS_0454 NC_010741.1 upstream YP_001933459.1 R 486620 486675 ACGCTCCCGGGAGCCTGCTCTATGTCCTACAAATTCTGTAAGGACCCCCACGTCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:486620:486675:R YP_001933459.1|Treponema_pallidum_SS14_uid58977|TPASS_0455 NC_010741.1 upstream YP_001933460.1 R 487993 488059 CCTGCTGTGCTAGGGTGCGCCCGCCTTGCACCCTGCAGCTGTCCTGTGTTAAGGAAGTCAAGATACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:487993:488059:R YP_001933460.1|Treponema_pallidum_SS14_uid58977|TPASS_0456 NC_010741.1 upstream YP_001933461.1 D 487993 488059 GGTATCTTGACTTCCTTAACACAGGACAGCTGCAGGGTGCAAGGCGGGCGCACCCTAGCACAGCAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:487993:488059:D YP_001933461.1|Treponema_pallidum_SS14_uid58977|TPASS_0457 NC_010741.1 upstream YP_001933462.1 D 489842 489931 CGGAAGTCAGACAGGCGGGTGCCGTCTTCCCTGTCGTTAGATTGCATTGGGTGCTTGTAGGAGGGAGGGAAAGAGCGTAGCATCGGCAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:489842:489931:D YP_001933462.1|Treponema_pallidum_SS14_uid58977|TPASS_0458 NC_010741.1 upstream YP_001933463.1 D 490511 490538 GCCGGGTGAACAGAGGGTGCAGGGGAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:490511:490538:D YP_001933463.1|Treponema_pallidum_SS14_uid58977|TPASS_0459 NC_010741.1 upstream YP_001933464.1 D 491325 491366 CAGGGACGTGGTTTTGACTGGCTGGGGGGAGGGTGACTGAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:491325:491366:D YP_001933464.1|Treponema_pallidum_SS14_uid58977|TPASS_0460 NC_010741.1 upstream YP_001933465.1 D 492075 492074 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:492075:492074:D YP_001933465.1|Treponema_pallidum_SS14_uid58977|TPASS_0461 NC_010741.1 upstream YP_001933466.1 D 492435 492638 CGGCCTCGGGGGGCTGCAGTGTGCTTTGTTTTTGGTAGGGGGGTCTCTGTGCCTGTGATAGGAGCGGGGACGTGCCACGTCTGCATGAGGGCAGTAATAGGGGGGAACAATGGAAAGGATTGGAAAGAGCTGTAGTCCAAGCAGGTGGAGGCTGTGCGCGCGGCGAAGGCGTGCCGCGCGCACACAGACGGCGCAAGCCGCGTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:492435:492638:D YP_001933466.1|Treponema_pallidum_SS14_uid58977|TPASS_0462 NC_010741.1 upstream YP_001933467.1 D 493482 493485 GTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:493482:493485:D YP_001933467.1|Treponema_pallidum_SS14_uid58977|TPASS_0463 NC_010741.1 upstream YP_001933468.1 R 494630 494629 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:494630:494629:R YP_001933468.1|Treponema_pallidum_SS14_uid58977|TPASS_0464 NC_010741.1 upstream YP_001933469.1 R 495499 495498 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:495499:495498:R YP_001933469.1|Treponema_pallidum_SS14_uid58977|TPASS_0465 NC_010741.1 upstream YP_001933470.1 R 496601 496600 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:496601:496600:R YP_001933470.1|Treponema_pallidum_SS14_uid58977|TPASS_0466 NC_010741.1 upstream YP_001933471.1 D 496591 496590 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:496591:496590:D YP_001933471.1|Treponema_pallidum_SS14_uid58977|TPASS_0467 NC_010741.1 upstream YP_001933472.1 R 498762 498761 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:498762:498761:R YP_001933472.1|Treponema_pallidum_SS14_uid58977|TPASS_0468 NC_010741.1 upstream YP_001933473.1 R 499696 499695 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:499696:499695:R YP_001933473.1|Treponema_pallidum_SS14_uid58977|TPASS_0470 NC_010741.1 upstream YP_001933474.1 D 499687 499686 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:499687:499686:D YP_001933474.1|Treponema_pallidum_SS14_uid58977|TPASS_0471 NC_010741.1 upstream YP_001933475.1 R 503185 503258 AACCAAAATAAGCCGGCATGCTTCTGCGCGTGACAGGAAAAACAGTTTCACGATTCTTGGTGGGGGCATGACCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:503185:503258:R YP_001933475.1|Treponema_pallidum_SS14_uid58977|uvrC NC_010741.1 upstream YP_001933476.1 R 503904 503967 AGCGGCGCACTTTTGATGGGCGAACGCATACCCGCGGTGATCTTTCGCCGTATGCGGTGCCCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:503904:503967:R YP_001933476.1|Treponema_pallidum_SS14_uid58977|TPASS_0473 NC_010741.1 upstream YP_001933477.1 R 504706 504845 GTCTGTGCTTCTTAAGCCCGCGGTAATTACGCGGGCCGTGCAATATGCGCCAGCGGGACTTGGAGAAAAGCGCACACCGTGCTAGCATCAGGCGCCCGCGTTCCGGTACGTACATTTTCGGGCATTAGGGGAAAGATCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:504706:504845:R YP_001933477.1|Treponema_pallidum_SS14_uid58977|TPASS_0474 NC_010741.1 upstream YP_001933478.1 R 506454 506516 AACAGCCGGCGATATGTCTGTAGGTAAACCCTACGGGGTAGAACGATAAAAGGAGAACGCGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:506454:506516:R YP_001933478.1|Treponema_pallidum_SS14_uid58977|pgi NC_010741.1 upstream YP_001933479.1 R 507864 507929 GAAAGTGGCGCATTTTGCGTGTATGCTACGGTGTCCGAGAAATTACCAAAACGGTGGAGGTGTATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:507864:507929:R YP_001933479.1|Treponema_pallidum_SS14_uid58977|ack NC_010741.1 upstream YP_001933480.1 R 508656 508715 CGGTAATGCCGAGCCTTGAACGACACTAGAACGTAGCGGGAGAGAGGAGGATGTTCGCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:508656:508715:R YP_001933480.1|Treponema_pallidum_SS14_uid58977|TPASS_0477 NC_010741.1 upstream YP_001933481.1 R 510264 510335 TGCCTTAGGGAGCGGAGAGTCTGCCTGCGGCACATCCGGTGTAGGTCGCACCGTTGAAAGAAGGGGCGGTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:510264:510335:R YP_001933481.1|Treponema_pallidum_SS14_uid58977|zwf NC_010741.1 upstream YP_001933482.1 R 511011 511121 GAGCTCCTCCTTTTTCTAAAGGCTGCGAGGCAATTATTAGGCGTTTAGCGCGCGCCGTCAAGTTTTTCTCACCGTTTGGCATACTCCTCTTCGCAAGGAAGGGGGGAGGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:511011:511121:R YP_001933482.1|Treponema_pallidum_SS14_uid58977|TPASS_0479 NC_010741.1 upstream YP_001933483.1 D 511011 511121 GCCCTCCCCCCTTCCTTGCGAAGAGGAGTATGCCAAACGGTGAGAAAAACTTGACGGCGCGCGCTAAACGCCTAATAATTGCCTCGCAGCCTTTAGAAAAAGGAGGAGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:511011:511121:D YP_001933483.1|Treponema_pallidum_SS14_uid58977|TPASS_0480 NC_010741.1 upstream YP_001933484.1 D 511611 511641 AGAAGATACTCAGCGTCAGGGAGAGGTTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:511611:511641:D YP_001933484.1|Treponema_pallidum_SS14_uid58977|TPASS_0481 NC_010741.1 upstream YP_001933485.1 D 513042 513041 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:513042:513041:D YP_001933485.1|Treponema_pallidum_SS14_uid58977|TPASS_0482 NC_010741.1 upstream YP_001933486.1 R 515081 515080 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:515081:515080:R YP_001933486.1|Treponema_pallidum_SS14_uid58977|TPASS_0483 NC_010741.1 upstream YP_001933487.1 R 517083 517082 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:517083:517082:R YP_001933487.1|Treponema_pallidum_SS14_uid58977|TPASS_0484 NC_010741.1 upstream YP_001933488.1 R 518821 518820 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:518821:518820:R YP_001933488.1|Treponema_pallidum_SS14_uid58977|TPASS_0485 NC_010741.1 upstream YP_001933489.1 R 520413 520500 TGGGGCTTTGATGACGCAGGAAGGTTGGGATCTCAGGTGTCTAGGCGTGCGGTATTCAAAAACAAAGGTGTAGAAGGGGGAGAGGGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:520413:520500:R YP_001933489.1|Treponema_pallidum_SS14_uid58977|TPASS_0486 NC_010741.1 upstream YP_001933490.1 R 522079 522305 GCCGGAAACAAGGATTCCTCCTGGAGTGTGGTCCTTGCAGGGCAGAACGTAACACAGCCGGTGCGTTACGATTCGCTCATCTATACATTTAGCGCAGATCGCGCCCTCAACTGCGTAAACTCCAAAGGATCCTTCGTGTGGCGCAGAAACTGCCCCGTAGTCGGCACTCCCTTTCTCAGCGTTTCTGACGATGGACTCGTGTACGTAAGCGAGGTTAGCGGACGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:522079:522305:R YP_001933490.1|Treponema_pallidum_SS14_uid58977|TPASS_0487 NC_010741.1 upstream YP_001933491.1 D 522079 522305 ACGCGTCCGCTAACCTCGCTTACGTACACGAGTCCATCGTCAGAAACGCTGAGAAAGGGAGTGCCGACTACGGGGCAGTTTCTGCGCCACACGAAGGATCCTTTGGAGTTTACGCAGTTGAGGGCGCGATCTGCGCTAAATGTATAGATGAGCGAATCGTAACGCACCGGCTGTGTTACGTTCTGCCCTGCAAGGACCACACTCCAGGAGGAATCCTTGTTTCCGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:522079:522305:D YP_001933491.1|Treponema_pallidum_SS14_uid58977|mcp2 NC_010741.1 upstream YP_001933492.1 D 525122 525290 CTTTCGTCTTCCGTTTGCTTTTGGGTAGTGTCTGACTTGTCTTTCCCTGGCGTTTCGTTCCAGGCGTTTTTGCTAGCTGCTGTGCCTCTTGTCACTTTCTTGAGTGCAGGATGTTCTTTTCGTGCGCGTGCGCGCGGTGCGGAAGGATTTCAGTGGCGGAGGAGGGGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:525122:525290:D YP_001933492.1|Treponema_pallidum_SS14_uid58977|TPASS_0489 NC_010741.1 upstream YP_001933493.1 D 526256 526255 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:526256:526255:D YP_001933493.1|Treponema_pallidum_SS14_uid58977|TPASS_0490 NC_010741.1 upstream YP_001933494.1 D 526445 526450 GCAGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:526445:526450:D YP_001933494.1|Treponema_pallidum_SS14_uid58977|TPASS_0491 NC_010741.1 upstream YP_001933495.1 D 527486 527508 AGAAAAATACGGGAATGTAGGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:527486:527508:D YP_001933495.1|Treponema_pallidum_SS14_uid58977|dnaG NC_010741.1 upstream YP_001933496.1 D 529323 529322 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:529323:529322:D YP_001933496.1|Treponema_pallidum_SS14_uid58977|rpoD NC_010741.1 upstream YP_001933497.1 D 531159 531167 GGGTATGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:531159:531167:D YP_001933497.1|Treponema_pallidum_SS14_uid58977|TPASS_0494 NC_010741.1 upstream YP_001933498.1 D 531990 532318 AGAGGTTGGTAAATGGGGTGACAGAGAACTGCAGATAGTCGCTGCGGGTTTCTCGCAGAGGAAAGTCCGGACTCCTTCGGAAATGATGCTAGTTAATTACTAGGCAGCGGCTCTCTGCAGTGCCGCTGACAGCAAGCGCCACAGAAAATATACCGCCTTTGGGTAAGGGTGAAAGGGCGAGGTAAGAGCTCACCGCGTTTTGGCGACAAAACGGCACGGCAAGCCTCATCAGGAGCAAGATCGAGCAGCAAAGGATATTCCGATCCTGTTTTGCGGGTTGATTGCATAAATTTATATAGCGATATATAAAGTGAGACAGATGATTATCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:531990:532318:D YP_001933498.1|Treponema_pallidum_SS14_uid58977|TPASS_0496 NC_010741.1 upstream YP_001933499.1 D 533309 533320 CTTGGAGGTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:533309:533320:D YP_001933499.1|Treponema_pallidum_SS14_uid58977|mreB NC_010741.1 upstream YP_001933500.1 D 534356 534359 TTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:534356:534359:D YP_001933500.1|Treponema_pallidum_SS14_uid58977|mreC NC_010741.1 upstream YP_001933501.1 D 535220 535219 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:535220:535219:D YP_001933501.1|Treponema_pallidum_SS14_uid58977|mreD NC_010741.1 upstream YP_001933502.1 D 535727 535726 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:535727:535726:D YP_001933502.1|Treponema_pallidum_SS14_uid58977|pbp1 NC_010741.1 upstream YP_001933503.1 D 537598 537597 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:537598:537597:D YP_001933503.1|Treponema_pallidum_SS14_uid58977|rodA NC_010741.1 upstream YP_001933504.1 D 538900 538924 ATAGAGTAAGGAAAGGACATTTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:538900:538924:D YP_001933504.1|Treponema_pallidum_SS14_uid58977|TPASS_0502 NC_010741.1 upstream YP_001933505.1 D 539800 539799 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:539800:539799:D YP_001933505.1|Treponema_pallidum_SS14_uid58977|TPASS_0503 NC_010741.1 upstream YP_001933506.1 D 540345 540344 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:540345:540344:D YP_001933506.1|Treponema_pallidum_SS14_uid58977|TPASS_0504 NC_010741.1 upstream YP_001933507.1 R 541829 542187 GTCCTCCGACACCCTCCCCCCAGGATCACATATCATGCAAAAAGGATCAAGATGAATCGTATCGTCGCGTCCCACGCACCTCCTCTTTTCGCTCAACATTTCCTTCAATCAGTCCAAACCTCTAGGAAGATATCCAAGTCGCCGAACACAACAGGGGCGTAGTAGGGGATTGACTGTGCAGTCACTGGGTCCGTCGGGTTCACCCTACAAGGAACACTCCGTTTGCCGTACTCGTTCCGCATAGGCCCTGTCTTTAGGTATAAACTCCCTGCCCCATACGCCGGCACCCCTTTTTTGCAGGAACGGTTTCCTAAACGAGCTATCCGTGCTACCCTGGCAGCCGACCAGGGAGGGCGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:541829:542187:R YP_001933507.1|Treponema_pallidum_SS14_uid58977|hxk NC_010741.1 upstream YP_001933508.1 D 542483 542562 TTTTCAGCGCTTTGCTGCATCCTGCTTGGACCGTGCGAGGCGTTGCGGACGTAGGTATTTCTTCCTAAGGATCTGGGCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:542483:542562:D YP_001933508.1|Treponema_pallidum_SS14_uid58977|tig NC_010741.1 upstream YP_001933509.1 D 543884 543883 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:543884:543883:D YP_001933509.1|Treponema_pallidum_SS14_uid58977|clpP NC_010741.1 upstream YP_001933510.1 D 544482 544481 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:544482:544481:D YP_001933510.1|Treponema_pallidum_SS14_uid58977|clpX NC_010741.1 upstream YP_001933511.1 D 545730 545825 TGGTGTGGTGACCCGGGGGATACGTGTGAAAGACTTTACTTTTCCCCGTTTGTTTCCTATAGTTTGCGCTAGAGTGCGAACGTTTGGGAGGTTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:545730:545825:D YP_001933511.1|Treponema_pallidum_SS14_uid58977|ahpC NC_010741.1 upstream YP_001933512.1 R 548391 548432 AACACAAAGAACGTGTAGACTGGCGCACCCTTTTGTACTACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:548391:548432:R YP_001933512.1|Treponema_pallidum_SS14_uid58977|lepA NC_010741.1 upstream YP_001933513.1 D 548391 548432 AGTAGTACAAAAGGGTGCGCCAGTCTACACGTTCTTTGTGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:548391:548432:D YP_001933513.1|Treponema_pallidum_SS14_uid58977|carD NC_010741.1 upstream YP_001933514.1 D 549056 549055 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:549056:549055:D YP_001933514.1|Treponema_pallidum_SS14_uid58977|TPASS_0512 NC_010741.1 upstream YP_001933515.1 D 550304 550376 GTGGCAGGCGTTGTGCGCCGTGTTCTGCGCGCTGGCCATGCAAAAAAATTTCGTGCTACTATGGCCTTCGGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:550304:550376:D YP_001933515.1|Treponema_pallidum_SS14_uid58977|trkA NC_010741.1 upstream YP_001933516.1 D 551778 551890 TGCGGTCTGCCGCGAAGGGAGTGGAATTGCATAAAGCATAAAAATTGCGCATAGTCTGCCCTCTTATGGATGGGGATCGCGTAGAAAGGGAGAACGTGTCGCAGGACGTTCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:551778:551890:D YP_001933516.1|Treponema_pallidum_SS14_uid58977|uvrA NC_010741.1 upstream YP_001933517.1 D 554770 554769 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:554770:554769:D YP_001933517.1|Treponema_pallidum_SS14_uid58977|TPASS_0515 NC_010741.1 upstream YP_001933518.1 R 559340 559339 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:559340:559339:R YP_001933518.1|Treponema_pallidum_SS14_uid58977|mviN NC_010741.1 upstream YP_001933519.1 R 559927 559926 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:559927:559926:R YP_001933519.1|Treponema_pallidum_SS14_uid58977|ruvC NC_010741.1 upstream YP_001933520.1 R 560601 560600 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:560601:560600:R YP_001933520.1|Treponema_pallidum_SS14_uid58977|TPASS_0518 NC_010741.1 upstream YP_001933521.1 R 561974 562373 CATACGAGGCGATGAACACCTGCTAAGACAGGCATTGGTAAACATTATCACTAATGCTAAAGAAGCCATGCAAAGAGGAGGGGCCCTTGAAGTCTTTGTCCATAAACAAACTGACCACATCAGTATCAGTATTTCGGATACAGGAGAGGGAATTGATGCCCGAAATATTCACAATATTTTTGAGCCGTACTTCACTACTAAAACTGAAGGTACGGGGTTAGGGTTAACCTTAACGTTTAAGGTGATTAAAGAACATGGCGGTGACATCAGTGTGTCCTCTACTGTTGGACGGGGTACGTGTTTTACTCTCCTTTTACCCATAGATAAATTGGGACGATCGCTTTTACAAGAAAAAATATCCACCCACCTAAGACATACGAGTAAAGAATAAGGAAATGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:561974:562373:R YP_001933521.1|Treponema_pallidum_SS14_uid58977|atoC NC_010741.1 upstream YP_001933522.1 R 564440 564449 GCGCGTTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:564440:564449:R YP_001933522.1|Treponema_pallidum_SS14_uid58977|TPASS_0521 NC_010741.1 upstream YP_001933523.1 R 564930 564929 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:564930:564929:R YP_001933523.1|Treponema_pallidum_SS14_uid58977|TPASS_0522 NC_010741.1 upstream YP_001933524.1 R 566081 566083 CGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:566081:566083:R YP_001933524.1|Treponema_pallidum_SS14_uid58977|murG NC_010741.1 upstream YP_001933525.1 R 568730 568864 GTAATTCCTCTCTTATCTCCTAGTAAACGTCTTGCACGACCTGCGGGGGCGCAGTATACCGCGCAGGTATATTTTTTAAAAGGCCTCGAATGGAGGCATTGACTTTTCGTCCCTTGCCTGGATACTAGGCGCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:568730:568864:R YP_001933525.1|Treponema_pallidum_SS14_uid58977|lon2 NC_010741.1 upstream YP_001933526.1 D 568730 568864 AGGGCGCCTAGTATCCAGGCAAGGGACGAAAAGTCAATGCCTCCATTCGAGGCCTTTTAAAAAATATACCTGCGCGGTATACTGCGCCCCCGCAGGTCGTGCAAGACGTTTACTAGGAGATAAGAGAGGAATTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:568730:568864:D YP_001933526.1|Treponema_pallidum_SS14_uid58977|efp NC_010741.1 upstream YP_001933527.1 D 569429 569575 CGCTTGGTCGCTCCGTCTTTCTGTACTCTCAGCACCGTCCGCGCAGTGCGCGTGCGGACGCTCCCTACCGCCCGTTCGCACCACTCCCACTTCTGGTTCTTTTTTCTATCCTGTCCTATCCACACGCAGTAAGAGGAGCTTGCAATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:569429:569575:D YP_001933527.1|Treponema_pallidum_SS14_uid58977|hrpA NC_010741.1 upstream YP_001933528.1 R 572260 572353 AGACCATGTGTCCTATAAGGCTCTTGGAGAAGGGTGATTTCTTTGCGGCGCTCCCTTGCTGTGTGTCTTGGCCACGCAGGGAGAGGATACAGAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:572260:572353:R YP_001933528.1|Treponema_pallidum_SS14_uid58977|atpD2 NC_010741.1 upstream YP_001933529.1 R 573797 573796 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:573797:573796:R YP_001933529.1|Treponema_pallidum_SS14_uid58977|atpB2 NC_010741.1 upstream YP_001933530.1 R 575611 575610 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:575611:575610:R YP_001933530.1|Treponema_pallidum_SS14_uid58977|atpA2 NC_010741.1 upstream YP_001933531.1 R 576234 576238 ACTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:576234:576238:R YP_001933531.1|Treponema_pallidum_SS14_uid58977|TPASS_0530 NC_010741.1 upstream YP_001933532.1 R 576578 576977 TTCAAGCGGTTCGGCTGCAATACTACGAGTTTTTTTCAAAGTTTTTTACCAAAAGTGGGAGCGTCTTCGCACCGTTTAGGTTTGGATATCAGGAGGATTAGTATGGGTTGGAAAAGAGCATGGTTTACGGGTGTGTTTGCTGGCTTGTGCGTGCTTCTTAACGCGGAGAGTCAGCCGCCCTCTCATGTAGATGGCGGCTTAAAATGCATTGCCGCAGGACTCGCGGTGGGGCTCGCTTGCGTTGGGGGAGGCCTTGCAGTAGGTAAAATCGGGGCTGCAGCGATGGGGGCAATGAGTGAGGATCCTGAAATTTCAGGAAAGGCACTTCCCTTTATCGGTCTTGCAGAAGGCATTTGTCTGTGGGGTTTTTTGGTCGCATTGCTTATCATCTTGCTTTGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:576578:576977:R YP_001933532.1|Treponema_pallidum_SS14_uid58977|TPASS_0531 NC_010741.1 upstream YP_001933533.1 R 578562 578561 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:578562:578561:R YP_001933533.1|Treponema_pallidum_SS14_uid58977|atpI2 NC_010741.1 upstream YP_001933534.1 R 579580 579582 TGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:579580:579582:R YP_001933534.1|Treponema_pallidum_SS14_uid58977|TPASS_0534 NC_010741.1 upstream YP_001933535.1 R 579796 579935 GGTACGGGAGTAGGTCGATGTGCTCGCTGAGTGTCGGCCGCGTGGGTTGGTAATATGGATAAAGGGGTGATGGTCCGCCTAGCGGAGGTGGAGGATGCGGCCGCTGTCCTCGTGGAGAAGGCGCAGGAGCAGGCGCACGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:579796:579935:R YP_001933535.1|Treponema_pallidum_SS14_uid58977|TPASS_0535 NC_010741.1 upstream YP_001933536.1 R 580338 580486 AGAGTAGTAAAGGATTCTGGGTGGTGTGCGGTATTGCGTAAGCAGGTTTCTTTTTTTGTGCCGTTCACATGGTCGTTTTTCTGTTCTCGGGACAGGGAGTGAAAGGTTGAAGTCCTTGTTTTTGCGCACGCTTTGGTGTAGCATGAGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:580338:580486:R YP_001933536.1|Treponema_pallidum_SS14_uid58977|secG NC_010741.1 upstream YP_001933537.1 R 581237 581386 GATATAGTGGTGCCGTGAGATTTTCCCTTGGGTTGGGGCGAGATCTCCTGGCGAGGGTATGTCTCTGCGGTGGCTCTATAGAACAGTTTCTCGTGGAGCTATCGGCGGGGTGTTTGTGGTGTGAACGAAAGGATGTGCTAAGGAGGGGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:581237:581386:R YP_001933537.1|Treponema_pallidum_SS14_uid58977|tpiA NC_010741.1 upstream YP_001933538.1 R 582647 582646 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:582647:582646:R YP_001933538.1|Treponema_pallidum_SS14_uid58977|pgk NC_010741.1 upstream YP_001933539.1 D 582618 582617 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:582618:582617:D YP_001933539.1|Treponema_pallidum_SS14_uid58977|TPASS_0539 NC_010741.1 upstream YP_001933540.1 D 582934 583119 TGATGTTTTTGGTTCTTTCAGTTAAGAATTCTCATGGAAGGTGGTGTGTCTTTCACGGGTTGTGGCCCCTTGGGGGCAGTGAGCAGTACTTCCAGCTTTTTTAGAATGGGCCGTGCAGCGTCCCGTGGGTCTGTGTGCGCCTGGTTTCTATCGGAAAAATGCGGGGCTTGGTGCCCATGAGAGTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:582934:583119:D YP_001933540.1|Treponema_pallidum_SS14_uid58977|spoIIAA2 NC_010741.1 upstream YP_001933541.1 D 583492 583620 GTTTTTCCTCGTCATGGGTTGAACCCTCCCACGCGCGGGAGGGTTAGATATCCCACAGCTTTTTGCTGCCGCGTGCCGCTGCACGGACTGCAGTGGTAGCGTCTTTCCTTTATACTCAGCACTGTGCAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:583492:583620:D YP_001933541.1|Treponema_pallidum_SS14_uid58977|era NC_010741.1 upstream YP_001933542.1 R 586299 586357 GTTGTGGGGGTGCGGCGGTGCGGTCGTGCTATTTTTCGTATATGAAGGAGTAATCATCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:586299:586357:R YP_001933542.1|Treponema_pallidum_SS14_uid58977|TPASS_0542 NC_010741.1 upstream YP_001933543.1 R 587042 587082 CGTAGTGTTCGCTTCAGTGCGCCACACATAAAGAGGAGATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:587042:587082:R YP_001933543.1|Treponema_pallidum_SS14_uid58977|ruvA NC_010741.1 upstream YP_001933544.1 R 588958 588981 TACACTGCGCGTGAGGAGTGTCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:588958:588981:R YP_001933544.1|Treponema_pallidum_SS14_uid58977|TPASS_0544 NC_010741.1 upstream YP_001933545.1 R 590047 590130 TTTCTATATTCCTCGCGCGGGTATCAGGGTGTGAGGGGAAAGAAGTGTCAAATCAGAATGCGCTGGTGAACATGAGGAGGAAAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:590047:590130:R YP_001933545.1|Treponema_pallidum_SS14_uid58977|mglB1 NC_010741.1 upstream YP_001933546.1 R 592132 592131 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:592132:592131:R YP_001933546.1|Treponema_pallidum_SS14_uid58977|TPASS_0546 NC_010741.1 upstream YP_001933547.1 R 592974 593116 TCGCGCAGGAAAAGCAACGTGTCTTTTTCAAAATAAATAAAAGAAGAAGAACTCACCACCACGCCGCGCCCTTGCATGACCTGGGTGCCTTTGGTACACTCGGCGCGCCAGTTTTCGTCCGGTTTAGTGCCCCAGTGAGTGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:592974:593116:R YP_001933547.1|Treponema_pallidum_SS14_uid58977|lytB NC_010741.1 upstream YP_001933548.1 D 592974 593116 ATCACTCACTGGGGCACTAAACCGGACGAAAACTGGCGCGCCGAGTGTACCAAAGGCACCCAGGTCATGCAAGGGCGCGGCGTGGTGGTGAGTTCTTCTTCTTTTATTTATTTTGAAAAAGACACGTTGCTTTTCCTGCGCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:592974:593116:D YP_001933548.1|Treponema_pallidum_SS14_uid58977|TPASS_0548 NC_010741.1 upstream YP_001933549.1 D 594434 594530 CCTGCCGTGGCGCACCCCTGCTTTGCTCCACGCCGCGCTCTTTACGTTCCCCGCACACATGCGCTACACTCCCCGCCACCGCCGCAGGGAGGGCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:594434:594530:D YP_001933549.1|Treponema_pallidum_SS14_uid58977|clpC NC_010741.1 upstream YP_001933550.1 R 598504 598506 CTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:598504:598506:R YP_001933550.1|Treponema_pallidum_SS14_uid58977|trmE NC_010741.1 upstream YP_001933551.1 R 599596 599607 GGATAGGACACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:599596:599607:R YP_001933551.1|Treponema_pallidum_SS14_uid58977|TPASS_0551 NC_010741.1 upstream YP_001933552.1 R 600142 600216 TCGTTCGGCCTGCGCGTGTCTTGGCGGGTGCTTCTCTCTTTTCCCAGTTTTGTATTGTCACGGAGTTTGCGTTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:600142:600216:R YP_001933552.1|Treponema_pallidum_SS14_uid58977|TPASS_0552 NC_010741.1 upstream YP_001933553.1 D 600289 600384 GAGGACCCCTCAGGCTAACAAAAAAAGACGCAATCGTTCAAGGGTAAACCAACCGATACTCCAGGCACGCTGTGACCTTGCGCAAAGGGGATTACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:600289:600384:D YP_001933553.1|Treponema_pallidum_SS14_uid58977|TPASS_0553 NC_010741.1 upstream YP_001933554.1 D 601597 601630 GGATATCTTGCTGCTCGGCGCCCTTTTTATTACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:601597:601630:D YP_001933554.1|Treponema_pallidum_SS14_uid58977|gph2 NC_010741.1 upstream YP_001933555.1 R 603554 603775 GTGAACCGTAGTGGGAGTAAGCTGGGTTGTTGCATAGGGGTGCGCTCCGCCCCGGCATGCAACCCGTCGGTGCGTCTTTCCTGCATAGTTCTTGGGAGGTGCGGGTTCGATCTGTTTTGCCTCGCCTTCGAGGTTGGTTCTATGACATAAAAAGACCGCTGACCTGTTATCAGAGGATAGTCTTTTTGGTATACTGCCGGCGCGTGTGCGGAGGAGGACGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:603554:603775:R YP_001933555.1|Treponema_pallidum_SS14_uid58977|TPASS_0555 NC_010741.1 upstream YP_001933556.1 R 604769 604872 ACCACCTCCCTGCTGTCAGATTACTTGAGTATTGCACTACACCGCCACCCTATTAAATAATGCGTGCACAGTTTACTCAACAAGGTAAAAGGTTGGCGTTAACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:604769:604872:R YP_001933556.1|Treponema_pallidum_SS14_uid58977|asnA NC_010741.1 upstream YP_001933557.1 D 604769 604872 AGTTAACGCCAACCTTTTACCTTGTTGAGTAAACTGTGCACGCATTATTTAATAGGGTGGCGGTGTAGTGCAATACTCAAGTAATCTGACAGCAGGGAGGTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:604769:604872:D YP_001933557.1|Treponema_pallidum_SS14_uid58977|TPASS_0557 NC_010741.1 upstream YP_001933558.1 D 605587 605615 GGTCCTTTTCCAAGGGGAGTTGAGAGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:605587:605615:D YP_001933558.1|Treponema_pallidum_SS14_uid58977|TPASS_0558 NC_010741.1 upstream YP_001933559.1 D 606525 606585 AAGGAGAATGTACCTCCGCTATCTAGGTGACACTGCCTGGATAAAACCATATACCTAACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:606525:606585:D YP_001933559.1|Treponema_pallidum_SS14_uid58977|TPASS_0559 NC_010741.1 upstream YP_001933560.1 R 609830 609939 CTGCTCCTAGCACAGCACGGTTTCTTTTTCTGTACGGGCAGTCTCTCTTGGAAGAGGTGTATCTATAGTGTGCTCGGTGACGCACGGGAAAAGCATAAGGAGTGAGAACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:609830:609939:R YP_001933560.1|Treponema_pallidum_SS14_uid58977|tktA NC_010741.1 upstream YP_001933561.1 R 610792 610961 GGGGCATTGTACGCCAAACGCGTGATTGGTGTATAGCTTTCCTGATCGGTAGGCAATCCTTGCCGTGGTTTGTATGGGTAAGAGGCAGGTGCTAAGATAGTGTGCGCTTGTCAGACATCTATTTTTGCAGTACCGTCGTGTCGGCCCTGCGGGTGCCGAGGATGAACGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:610792:610961:R YP_001933561.1|Treponema_pallidum_SS14_uid58977|TPASS_0561 NC_010741.1 upstream YP_001933562.1 D 610792 610961 GCCGTTCATCCTCGGCACCCGCAGGGCCGACACGACGGTACTGCAAAAATAGATGTCTGACAAGCGCACACTATCTTAGCACCTGCCTCTTACCCATACAAACCACGGCAAGGATTGCCTACCGATCAGGAAAGCTATACACCAATCACGCGTTTGGCGTACAATGCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:610792:610961:D YP_001933562.1|Treponema_pallidum_SS14_uid58977|spsE NC_010741.1 upstream YP_001933563.1 D 612089 612088 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:612089:612088:D YP_001933563.1|Treponema_pallidum_SS14_uid58977|TPASS_0563 NC_010741.1 upstream YP_001933564.1 D 612499 612498 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:612499:612498:D YP_001933564.1|Treponema_pallidum_SS14_uid58977|TPASS_0564 NC_010741.1 upstream YP_001933565.1 R 615638 615647 CGAAGGGGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:615638:615647:R YP_001933565.1|Treponema_pallidum_SS14_uid58977|TPASS_0565 NC_010741.1 upstream YP_001933566.1 R 617136 617166 GCGGTTTATACCAACTTGATAAAGTGCTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:617136:617166:R YP_001933566.1|Treponema_pallidum_SS14_uid58977|algI NC_010741.1 upstream YP_001933567.1 R 617788 617865 GGGGTGGTGGCTCAAACGTTGTCTTTCTCAGAGAGGGCACGTATACTGCCGGCGGCACTCAGGTGCGGGAGGTAACTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:617788:617865:R YP_001933567.1|Treponema_pallidum_SS14_uid58977|TPASS_0567 NC_010741.1 upstream YP_001933568.1 R 618499 618619 CGTTTTCCTGTTGATTGGTGTTATACGCAGATCTTGATTTTTGATCATAAAGGACATTAGCTTAGGCGGGTGCACTGCATGTGGTGTCTGAAAAGATGTCCGCGGGCAAGAGGAGGGAATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:618499:618619:R YP_001933568.1|Treponema_pallidum_SS14_uid58977|eda NC_010741.1 upstream YP_001933569.1 R 620945 620968 AATTGAATCGGTGTTCTGCGTAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:620945:620968:R YP_001933569.1|Treponema_pallidum_SS14_uid58977|TPASS_0569 NC_010741.1 upstream YP_001933570.1 R 621815 621840 GTGTGTGCGTTGCCGCGCCAAGAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:621815:621840:R YP_001933570.1|Treponema_pallidum_SS14_uid58977|TPASS_0570 NC_010741.1 upstream YP_001933571.1 R 622507 622523 ATCTAAGAAGAGCGGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:622507:622523:R YP_001933571.1|Treponema_pallidum_SS14_uid58977|TPASS_0571 NC_010741.1 upstream YP_001933572.1 R 623607 623606 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:623607:623606:R YP_001933572.1|Treponema_pallidum_SS14_uid58977|TPASS_0572 NC_010741.1 upstream YP_001933573.1 D 623597 623596 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:623597:623596:D YP_001933573.1|Treponema_pallidum_SS14_uid58977|TPASS_0573 NC_010741.1 upstream YP_001933574.1 R 625021 625420 CGTCGGCCAGCATTTCTGCTTGGCCACTGAGCACGGCATACTCGGGTGCAGGCTCGTCTCCGGATGCTTTTGCGCGCACTGAATCGAGCAGGTTCTGCAGCGAGGCGCGCGCATATGAAAGTGCGTTGCGCAAGCGGGCAATTTCCTGCGATGGGGGGCGCAGGCGGGATCCGCCAGGGCGGGAGCGGGTAGGTAGCAGGGTATCGAAGCAAAAGACTGGACCGATGGCGCATCCTGCTGAGGCAATAATGCCGGTGATAGGGGGAATGGTGCGCATGGCTCTGAGCATAGCGGATCCTCCCAAAAAGAGGAAGGACGCGCCTGTGTGTGCTCTGCATAAGACGTTGACAATCCCTGTGGGGCGTGCCTATACTCAGGCCCTCTATACGGAGGTGTAATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:625021:625420:R YP_001933574.1|Treponema_pallidum_SS14_uid58977|TPASS_0574 NC_010741.1 upstream YP_001933575.1 D 626852 627251 TGCGCACAGACATCTGCGGCAACGTCCCGGTATTTCTTTTGGAGAACAGGGAATCGGACGCGTGGTCATGTGCGGCGCCATGGCTGAAGATGAAACTGCGCTCTTTCTTCTGGCGGGGCTCGGCCTGCGAGCGTTGAGTGTGCCTTCTTCACGCATCGAGACGCTGCACACGTTCTTATCACGCATTTCAGTCTCTGATGCAGAGCACTGTGCACGTGCAGCCGTGCAGCTTTCAGATGCGCAGTCAGTCCGCACACTCATCGAAGAACATCTGCGCACCGCAGGTATTACGCTTGAGAAAGACGAGGAAGAACCCTCACCCCCTCGATCCCCATAGCGGAGGAGGCCTCAGGCGTTTTCTCCATACACAGAAAGGAAAAGGCAATGGAAATCGAAGAAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:626852:627251:D YP_001933575.1|Treponema_pallidum_SS14_uid58977|prfB NC_010741.1 upstream YP_001933576.1 D 628250 628249 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:628250:628249:D YP_001933576.1|Treponema_pallidum_SS14_uid58977|TPASS_0577 NC_010741.1 upstream YP_001933577.1 D 630095 630100 AGGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:630095:630100:D YP_001933577.1|Treponema_pallidum_SS14_uid58977|ftsY NC_010741.1 upstream YP_001933578.1 D 630985 630984 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:630985:630984:D YP_001933578.1|Treponema_pallidum_SS14_uid58977|TPASS_0579 NC_010741.1 upstream YP_001933579.1 D 631754 631753 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:631754:631753:D YP_001933579.1|Treponema_pallidum_SS14_uid58977|TPASS_0580 NC_010741.1 upstream YP_001933580.1 D 633036 633035 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:633036:633035:D YP_001933580.1|Treponema_pallidum_SS14_uid58977|TPASS_0581 NC_010741.1 upstream YP_001933581.1 D 633713 633712 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:633713:633712:D YP_001933581.1|Treponema_pallidum_SS14_uid58977|TPASS_0582 NC_010741.1 upstream YP_001933582.1 R 635310 635309 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:635310:635309:R YP_001933582.1|Treponema_pallidum_SS14_uid58977|TPASS_0583 NC_010741.1 upstream YP_001933583.1 D 635296 635295 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:635296:635295:D YP_001933583.1|Treponema_pallidum_SS14_uid58977|TPASS_0584 NC_010741.1 upstream YP_001933584.1 D 636698 636697 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:636698:636697:D YP_001933584.1|Treponema_pallidum_SS14_uid58977|oppA NC_010741.1 upstream YP_001933585.1 D 638342 638429 AGGGGCTGCAACCCGTGCACACCCAGGTGTACCTTGCAACGTAGATGTACCGGCGTGTACAATGCCCTCTGCATACACAGAGGGGATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:638342:638429:D YP_001933585.1|Treponema_pallidum_SS14_uid58977|leuS NC_010741.1 upstream YP_001933586.1 R 641277 641302 AGCGCTATGGGTTCACTTCTCGGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:641277:641302:R YP_001933586.1|Treponema_pallidum_SS14_uid58977|TPASS_0587 NC_010741.1 upstream YP_001933587.1 R 642068 642154 ATACGCTCTTACGTGTTAGAACGCCTGTGTTTGTGCTCTTTGCGTGATAGGGGTACTGTACACTGAGATAGGGAAGGGGCAGAAGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:642068:642154:R YP_001933587.1|Treponema_pallidum_SS14_uid58977|TPASS_0588 NC_010741.1 upstream YP_001933588.1 R 642422 642421 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:642422:642421:R YP_001933588.1|Treponema_pallidum_SS14_uid58977|ptsH NC_010741.1 upstream YP_001933589.1 R 642510 642509 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:642510:642509:R YP_001933589.1|Treponema_pallidum_SS14_uid58977|TPASS_0590 NC_010741.1 upstream YP_001933590.1 R 643426 643603 GTGTGCCCCACACCCGGGCGCCGTCAGCAGACACCAGTTGTATGTAAAAGTCAAGAGTTCCTGTACGGACTTGTGGCTCTCTTGAAGAGAGGCTCTCACTGCGGTGGGCTCGTTTACGGGTCCTGGCTTTTGTGCTACAGTAGCGGCCGTGGGTGCTCCTCTTTTTACCGTTCTCGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:643426:643603:R YP_001933590.1|Treponema_pallidum_SS14_uid58977|ptsK NC_010741.1 upstream YP_001933591.1 D 644029 644187 AAAAAACCCCCGACCGCACACCACCGCCATCCTATCCCTTTTTTTTACACTCTGACAAGTCCTGCCTTCCCCCTGCCTCCCCGTGCTTGACGCAAGAAACAATAAAATTGCTGCCTATGATTTCTTTAGCCGCGCGTATAATGCGCCGAGACACCGGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:644029:644187:D YP_001933591.1|Treponema_pallidum_SS14_uid58977|TPASS_0592 NC_010741.1 upstream YP_001933592.1 D 645627 645626 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:645627:645626:D YP_001933592.1|Treponema_pallidum_SS14_uid58977|TPASS_0593 NC_010741.1 upstream YP_001933593.1 R 648356 648382 GCTCGATGTATGTGGGGGGTGCGTCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:648356:648382:R YP_001933593.1|Treponema_pallidum_SS14_uid58977|TPASS_0594 NC_010741.1 upstream YP_001933594.1 R 649019 649041 GAAGATAAGGTGGAGTTTGTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:649019:649041:R YP_001933594.1|Treponema_pallidum_SS14_uid58977|adk NC_010741.1 upstream YP_001933595.1 R 650155 650261 ACGGGTACACAAGGTGCGGTGTATTTTGTAATTCGGCACGGTGGTATGAATGCTTCCTAGTTGGTCTTGACAGGGAGCTCCTTCTCGGGGGAGGATGGGCGGGGTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:650155:650261:R YP_001933595.1|Treponema_pallidum_SS14_uid58977|pcnB NC_010741.1 upstream YP_001933596.1 R 652326 652361 CSCCGCACAGCGAGCAGCATCTGGTGTGCGTGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:652326:652361:R YP_001933596.1|Treponema_pallidum_SS14_uid58977|TPASS_0598 NC_010741.1 upstream YP_001933597.1 R 653019 653024 GAGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:653019:653024:R YP_001933597.1|Treponema_pallidum_SS14_uid58977|TPASS_0599 NC_010741.1 upstream YP_001933598.1 R 654378 654377 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:654378:654377:R YP_001933598.1|Treponema_pallidum_SS14_uid58977|TPASS_0600 NC_010741.1 upstream YP_001933599.1 R 655526 655525 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:655526:655525:R YP_001933599.1|Treponema_pallidum_SS14_uid58977|dxr NC_010741.1 upstream YP_001933600.1 R 656365 656364 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:656365:656364:R YP_001933600.1|Treponema_pallidum_SS14_uid58977|cdsA NC_010741.1 upstream YP_001933601.1 R 657048 657052 GTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:657048:657052:R YP_001933601.1|Treponema_pallidum_SS14_uid58977|TPASS_0603 NC_010741.1 upstream YP_001933602.1 R 657605 657707 GTGGGAAGCACGGATAGATCCTGCCACCCTGCAGGATGGGGAGCAAGCAGGCGTGGGGGAGCTCGTGCTTCTCTCTTGCCGCACTGTGTTGTGAGGGGAAAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:657605:657707:R YP_001933602.1|Treponema_pallidum_SS14_uid58977|frr NC_010741.1 upstream YP_001933603.1 R 658581 658670 GTGTGCCCTCCGCGGTCTCTTTTGGGATGTGTGTCTGGGTAGGCATGTTTGCATCGAAGTCTGATCGGAAAATGCTGTCAGGAGGGGTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:658581:658670:R YP_001933603.1|Treponema_pallidum_SS14_uid58977|tsf NC_010741.1 upstream YP_001933604.1 R 659547 659546 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:659547:659546:R YP_001933604.1|Treponema_pallidum_SS14_uid58977|rpsB NC_010741.1 upstream YP_001933605.1 R 659662 659743 CTGCTCTGTAACCTGCTGCGGGCCTGGGAAGGTCCACAGAAGAGGCGGGCAACCGTATTCCATACGTCTGATTTTAGTCAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:659662:659743:R YP_001933605.1|Treponema_pallidum_SS14_uid58977|TPASS_0607 NC_010741.1 upstream YP_001933606.1 R 660802 661118 TCTAACGCTTTTACCCTCTTTGTGGAAGGGCGTGGACCGGCAAGCAGCTGTGACGCCACGGCGCACGCCCTGCGCGGCATCTGCATGGAACGCCGCGCAGGACTGGGGAGAGCGAACCGTGCGAAAAAGCGTCGTTTCATTTCCAGGGAACTTACTCTCTAGATGAGGAGCGGCCGAGGCGCGGTCTTCTGTGACCGGGACCACGCCGTACGACATAGAAAACCAGATGCAAGTAGAGTATCAGAAACACTCCCGCAGAAAGGACGCGCGGGTGAACGATTACCGCGCCTATAAGACTCCACAGGTGCACCCTTTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:660802:661118:R YP_001933606.1|Treponema_pallidum_SS14_uid58977|TPASS_0608 NC_010741.1 upstream YP_001933607.1 D 660802 661118 GGAAAGGGTGCACCTGTGGAGTCTTATAGGCGCGGTAATCGTTCACCCGCGCGTCCTTTCTGCGGGAGTGTTTCTGATACTCTACTTGCATCTGGTTTTCTATGTCGTACGGCGTGGTCCCGGTCACAGAAGACCGCGCCTCGGCCGCTCCTCATCTAGAGAGTAAGTTCCCTGGAAATGAAACGACGCTTTTTCGCACGGTTCGCTCTCCCCAGTCCTGCGCGGCGTTCCATGCAGATGCCGCGCAGGGCGTGCGCCGTGGCGTCACAGCTGCTTGCCGGTCCACGCCCTTCCACAAAGAGGGTAAAAGCGTTAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:660802:661118:D YP_001933607.1|Treponema_pallidum_SS14_uid58977|asnC NC_010741.1 upstream YP_001933608.1 D 662691 662699 GATGGAGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:662691:662699:D YP_001933608.1|Treponema_pallidum_SS14_uid58977|tprH NC_010741.1 upstream YP_001933609.1 D 664782 664922 AACGCCAAGGTAGGACATACACTGCGCACGGTATTAAACCTGTATGTGTTTCCTGTGCAGGATGCGTGGTCTCTTTCCCTTGCAACATACATTCGAATGTACGTATACTCCTGCTCAGTTTACTCCTTGCAGGAGCCGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:664782:664922:D YP_001933609.1|Treponema_pallidum_SS14_uid58977|TPASS_0611 NC_010741.1 upstream YP_001933610.1 D 665703 665782 AAAAAGTAAGTTATCCTTTTGTGGAGGCGCGCTGCCCCCACGCCAGCAGACCGCATATCCACCGCTTAGAGGAAGCGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:665703:665782:D YP_001933610.1|Treponema_pallidum_SS14_uid58977|TPASS_0612 NC_010741.1 upstream YP_001933611.1 D 667223 667248 CTCCCTTCCTGAGGGCGCACAGCAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:667223:667248:D YP_001933611.1|Treponema_pallidum_SS14_uid58977|TPASS_0613 NC_010741.1 upstream YP_001933612.1 D 668394 668393 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:668394:668393:D YP_001933612.1|Treponema_pallidum_SS14_uid58977|nifS1 NC_010741.1 upstream YP_001933613.1 D 669609 669658 GCCAGTGCGCCTTCCTGGCATTCGCTGCCTTTCTCTAAGGAGATCTCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:669609:669658:D YP_001933613.1|Treponema_pallidum_SS14_uid58977|nifU NC_010741.1 upstream YP_001933614.1 D 670103 670122 GTGCACTTGTGGAAAAAGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:670103:670122:D YP_001933614.1|Treponema_pallidum_SS14_uid58977|rpiA NC_010741.1 upstream YP_001933615.1 R 671193 671287 ATACGTATCTGTCGGTAGCGGCGGGTTTTGAGTGCACTGCGCTCATCTACGACAGCTACCATTACATCACCATCCAGGCCCCCAATGAGGGTTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:671193:671287:R YP_001933615.1|Treponema_pallidum_SS14_uid58977|TPASS_0617 NC_010741.1 upstream YP_001933616.1 R 671648 671702 GGGAGGCGCCGGGAGGAACGGGTCCTGTCGAAGAATTGCGGGGAGGAGTGAAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:671648:671702:R YP_001933616.1|Treponema_pallidum_SS14_uid58977|TPASS_0618 NC_010741.1 upstream YP_001933617.1 R 672516 672515 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:672516:672515:R YP_001933617.1|Treponema_pallidum_SS14_uid58977|TPASS_0619 NC_010741.1 upstream YP_001933618.1 R 674342 674398 TCACACGCGGCTAGACGGGTGGGGGGGGTGAGGTAGAAGTGAGAGGAGGGGGAGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:674342:674398:R YP_001933618.1|Treponema_pallidum_SS14_uid58977|tprI NC_010741.1 upstream YP_001933619.1 R 676676 676734 TGTTAGAAAAGAAGGGTGAGGGGGCTACTAGACAGGGCCGGGGGGGGGGGTGAGGTAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:676676:676734:R YP_001933619.1|Treponema_pallidum_SS14_uid58977|tprJ NC_010741.1 upstream YP_001933620.1 R 678517 678516 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:678517:678516:R YP_001933620.1|Treponema_pallidum_SS14_uid58977|TPASS_0622 NC_010741.1 upstream YP_001933621.1 D 677933 677932 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:677933:677932:D YP_001933621.1|Treponema_pallidum_SS14_uid58977|dniR NC_010741.1 upstream YP_001933622.1 D 680273 680275 GGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:680273:680275:D YP_001933622.1|Treponema_pallidum_SS14_uid58977|TPASS_0624 NC_010741.1 upstream YP_001933623.1 D 681706 681705 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:681706:681705:D YP_001933623.1|Treponema_pallidum_SS14_uid58977|TPASS_0625 NC_010741.1 upstream YP_001933624.1 D 682455 682454 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:682455:682454:D YP_001933624.1|Treponema_pallidum_SS14_uid58977|TPASS_0626 NC_010741.1 upstream YP_001933625.1 D 683627 683626 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:683627:683626:D YP_001933625.1|Treponema_pallidum_SS14_uid58977|sbcC NC_010741.1 upstream YP_001933626.1 D 686767 686766 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:686767:686766:D YP_001933626.1|Treponema_pallidum_SS14_uid58977|TPASS_0628 NC_010741.1 upstream YP_001933627.1 D 688249 688418 GTCAACAGATGCTGGTTATTTTGCGCGCTCCACAGCAGCACGGTGCAGGCGCGCAAAGGAGAGTGAGAAAAAAGAGCAATGGCTTGACAGAAGTACCCGCTCCCTTCTAGAGTGGCAGCGGCGCTCCTCGTTTGTGGTCTTGTACACGCAGGAGGTCAGAACGAGGAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:688249:688418:D YP_001933627.1|Treponema_pallidum_SS14_uid58977|TPASS_0629 NC_010741.1 upstream YP_001933628.1 D 689244 689412 GACGGCGCATGATCTCTGCAAGCGTCACGCTCCTGACACACCGTGCGGCGCGTGCACCTTCAAGGGAGCAGACCGTGTCGGCGCGCGAGGTGCCAGGCACGCTTCCGTAAGACACAGTGTCGGTTCTCACTGTCGTTGTACACCCGGTAGCAATTACCCCGTGTGCAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:689244:689412:D YP_001933628.1|Treponema_pallidum_SS14_uid58977|cheR NC_010741.1 upstream YP_001933629.1 D 690325 690370 GGCTGCACACCAGAGCGTATACAGGCAGGGGGCCACAGACTACCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:690325:690370:D YP_001933629.1|Treponema_pallidum_SS14_uid58977|cheB NC_010741.1 upstream YP_001933630.1 D 691583 691686 GACGGACACGCACCCGTGATATAGAGGAGGGCTGCGCGGTCGGCGCACGTGTTCCTGCGCCTGCACTCTTGAATACTGGACGGACCTTGATTTACAGTCTCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:691583:691686:D YP_001933630.1|Treponema_pallidum_SS14_uid58977|trpS NC_010741.1 upstream YP_001933631.1 D 692701 692840 GGAACGCTTGTAGCCGCGCATCAACACGGCTGCCTGCAACGCAATCACGCTTCCGCCGGTTTCCCTCTTACCAGTGCGCCGAGTCCTGCCGCCGAGGAGGTGCCCTTGCAGGTCTGGCTCTCATCGCCTAGAATGGCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:692701:692840:D YP_001933631.1|Treponema_pallidum_SS14_uid58977|msrA NC_010741.1 upstream YP_001933632.1 D 693717 693834 CCGCTGCACTCACGCCCCCAGGGGACTGCGCCGCCGTTTTGGCATCTTCCGACAAGACGAAGGAGCGTTGCACGCGTGGGAGGTGCGCCCCGGACGCTACACATTGCGGCCTTGTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:693717:693834:D YP_001933632.1|Treponema_pallidum_SS14_uid58977|lig NC_010741.1 upstream YP_001933633.1 R 697112 697148 AAAAACGATGATCGCTCATCGCACCGCTCCATAGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:697112:697148:R YP_001933633.1|Treponema_pallidum_SS14_uid58977|TPASS_0636 NC_010741.1 upstream YP_001933634.1 R 698100 698322 GCGTTTACACAGCCGAGGATGACACACGCCGCGTCTTTTTGCTTCTTCTTGTGTGCTCTTTAAGGAGGGGTCAGGCGGTGTCTCGTGCCCCGCGTGTGTTTTTTAAGCAAGAAAAAGGAGTGGGGTGAATGGCTGTGGCGGGTTCCTTTGAGCGGAGTAGATTGCCGTTACGAGCACCATGAACGCGCCGTCGGAGTGGCGAAGACAAGACTGCCCGGTCCCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:698100:698322:R YP_001933634.1|Treponema_pallidum_SS14_uid58977|miaA NC_010741.1 upstream YP_001933635.1 R 698758 698837 CTTGTGGTGTCGCTTTCCTCGTATAAATGGTTCTGTTCTCGTCTTTCCTTTAACACGCTGAGGACGTGGGGGTGCTTTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:698758:698837:R YP_001933635.1|Treponema_pallidum_SS14_uid58977|TPASS_0638 NC_010741.1 upstream YP_001933636.1 D 699177 699176 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:699177:699176:D YP_001933636.1|Treponema_pallidum_SS14_uid58977|mcp3 NC_010741.1 upstream YP_001933637.1 D 701142 701164 TCCACCTTTCCATGGAGTAACCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:701142:701164:D YP_001933637.1|Treponema_pallidum_SS14_uid58977|mcp4 NC_010741.1 upstream YP_001933638.1 R 704356 704495 GAGCGCTTCCTCACCTTTAAAAGTACTGGACTATTTACGGCACCACAGGATAGAGGGGCATTGTAATGGGAAGGTGCTGCTCTGTGCAATGCTCACAAAAAGTGCATGTCTTGAAAAAGTGTACCAGAGCCACTACACTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:704356:704495:R YP_001933638.1|Treponema_pallidum_SS14_uid58977|hisS NC_010741.1 upstream YP_001933639.1 D 704356 704495 CAGTGTAGTGGCTCTGGTACACTTTTTCAAGACATGCACTTTTTGTGAGCATTGCACAGAGCAGCACCTTCCCATTACAATGCCCCTCTATCCTGTGGTGCCGTAAATAGTCCAGTACTTTTAAAGGTGAGGAAGCGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:704356:704495:D YP_001933639.1|Treponema_pallidum_SS14_uid58977|manB NC_010741.1 upstream YP_001933640.1 D 706253 706252 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:706253:706252:D YP_001933640.1|Treponema_pallidum_SS14_uid58977|dnaQ NC_010741.1 upstream YP_001933641.1 R 708484 708513 AAATATTTTGCGTACCTGTAAGGAAGGATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:708484:708513:R YP_001933641.1|Treponema_pallidum_SS14_uid58977|lysK NC_010741.1 upstream YP_001933642.1 R 708691 708748 TACGGCATGAATAGGAATCTGAGAAGGAGATGCACCCTCTAGCAATAGGTTTCATGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:708691:708748:R YP_001933642.1|Treponema_pallidum_SS14_uid58977|TPASS_0645 NC_010741.1 upstream YP_001933643.1 R 710072 710071 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:710072:710071:R YP_001933643.1|Treponema_pallidum_SS14_uid58977|TPASS_0646 NC_010741.1 upstream YP_001933644.1 R 711264 711312 GAGTGTCGTTTTTCTTGTACATTCAGAATAAGTAAGGGGAGAAAGGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:711264:711312:R YP_001933644.1|Treponema_pallidum_SS14_uid58977|serS NC_010741.1 upstream YP_001933645.1 R 713362 713361 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:713362:713361:R YP_001933645.1|Treponema_pallidum_SS14_uid58977|TPASS_0648 NC_010741.1 upstream YP_001933646.1 R 714104 714103 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:714104:714103:R YP_001933646.1|Treponema_pallidum_SS14_uid58977|tlyC NC_010741.1 upstream YP_001933647.1 R 714574 714578 TCTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:714574:714578:R YP_001933647.1|Treponema_pallidum_SS14_uid58977|TPASS_0650 NC_010741.1 upstream YP_001933648.1 R 716991 717165 TCCTTCTCATTGCGGAGGCCGATGGTGCGGTATTTGGGTATGTTCTGTCAAGGCTCGCGGTTGGGGTACGCAAGGCGTCCGTGTGTCCTTGCTGGACAGATTACCGCTGGCGTGTTACGCTCGCTGGCGCGAGAAGTGCGCATGAGGAAGAAAGGACCACCCCGTCTTACGCATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:716991:717165:R YP_001933648.1|Treponema_pallidum_SS14_uid58977|TPASS_0651 NC_010741.1 upstream YP_001933649.1 D 716991 717165 AATGCGTAAGACGGGGTGGTCCTTTCTTCCTCATGCGCACTTCTCGCGCCAGCGAGCGTAACACGCCAGCGGTAATCTGTCCAGCAAGGACACACGGACGCCTTGCGTACCCCAACCGCGAGCCTTGACAGAACATACCCAAATACCGCACCATCGGCCTCCGCAATGAGAAGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:716991:717165:D YP_001933649.1|Treponema_pallidum_SS14_uid58977|potA NC_010741.1 upstream YP_001933650.1 D 718302 718301 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:718302:718301:D YP_001933650.1|Treponema_pallidum_SS14_uid58977|potB NC_010741.1 upstream YP_001933651.1 D 719194 719193 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:719194:719193:D YP_001933651.1|Treponema_pallidum_SS14_uid58977|potC NC_010741.1 upstream YP_001933652.1 D 720013 720047 CTACTTTCTGCAAACAATCTCGTAAGGAGCAAAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:720013:720047:D YP_001933652.1|Treponema_pallidum_SS14_uid58977|potD NC_010741.1 upstream YP_001933653.1 D 721063 721062 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:721063:721062:D YP_001933653.1|Treponema_pallidum_SS14_uid58977|TPASS_0656 NC_010741.1 upstream YP_001933654.1 R 721371 721370 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:721371:721370:R YP_001933654.1|Treponema_pallidum_SS14_uid58977|csrA NC_010741.1 upstream YP_001933655.1 R 721817 721834 GGGAAGGAGCCGCACGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:721817:721834:R YP_001933655.1|Treponema_pallidum_SS14_uid58977|TPASS_0658 NC_010741.1 upstream YP_001933656.1 R 723086 723118 TTTTCAGATAGTGCACGGTATGAGGAAGGGAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:723086:723118:R YP_001933656.1|Treponema_pallidum_SS14_uid58977|flgL NC_010741.1 upstream YP_001933657.1 R 724997 725101 GGTGCGGTACCTCGGGGGAGGAGCAGAGCGCGAGTATCCACAGGGCGAGAGGGAGGTTCCTGATGGGGCTGCTGCGCGTACCCTCCATTCTTATAGGGAGAACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:724997:725101:R YP_001933657.1|Treponema_pallidum_SS14_uid58977|flgK NC_010741.1 upstream YP_001933658.1 R 725615 725736 AGCCAGCAGGTGCGAGCCGTCCAGTAGCCTGCGGAGCTGCAGACCACTGGACGGTTTTTTATTTCACTAAAAAGTAAAGCGCTCGGGAAAGGTGCCGAGACTCCTGGCTAGAGGAGTGGGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:725615:725736:R YP_001933658.1|Treponema_pallidum_SS14_uid58977|TPASS_0661 NC_010741.1 upstream YP_001933659.1 R 726736 727001 TCGCAAACTCCTTTTCACCACCCCTAACGCCTCGCAGGCGCCAGCTCGCCGCATTCTAGCGCATGGAGAAATAGCTTGTCAAACCTCCCGCGTGGTACCTGTCCAAATCGTCTTGCTGCCGTTCCAACGCCTGCGTGTGGACTCAAGCCTTCGCGCTTCGGTTGACTAGAGCGTCCCGATCGCCCTACCATGCCCCTCTTGCCGAGGGTGGCACGCTTCTCTATTTCGTGACTCTTCTCGAAGCAATCCTAACAAAGGGGGTTCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:726736:727001:R YP_001933659.1|Treponema_pallidum_SS14_uid58977|cbbA NC_010741.1 upstream YP_001933660.1 D 726736 727001 GAGAACCCCCTTTGTTAGGATTGCTTCGAGAAGAGTCACGAAATAGAGAAGCGTGCCACCCTCGGCAAGAGGGGCATGGTAGGGCGATCGGGACGCTCTAGTCAACCGAAGCGCGAAGGCTTGAGTCCACACGCAGGCGTTGGAACGGCAGCAAGACGATTTGGACAGGTACCACGCGGGAGGTTTGACAAGCTATTTCTCCATGCGCTAGAATGCGGCGAGCTGGCGCCTGCGAGGCGTTAGGGGTGGTGAAAAGGAGTTTGCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:726736:727001:D YP_001933660.1|Treponema_pallidum_SS14_uid58977|TPASS_0663 NC_010741.1 upstream YP_001933661.1 D 727727 727726 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:727727:727726:D YP_001933661.1|Treponema_pallidum_SS14_uid58977|flaA2 NC_010741.1 upstream YP_001933662.1 R 729226 729225 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:729226:729225:R YP_001933662.1|Treponema_pallidum_SS14_uid58977|TPASS_0665 NC_010741.1 upstream YP_001933663.1 R 729516 729558 CGAGTGCTTTTATAATGCAGGGTATGGCGACACAAAGTGACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:729516:729558:R YP_001933663.1|Treponema_pallidum_SS14_uid58977|TPASS_0666 NC_010741.1 upstream YP_001933664.1 R 731227 731297 TACGCTTGACACTGTGTGTTAAGAATGGATAGGCTGTCAACGGTTACCTGCGAAAAAGTCTCGATTCTTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:731227:731297:R YP_001933664.1|Treponema_pallidum_SS14_uid58977|udk NC_010741.1 upstream YP_001933665.1 R 732060 732059 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:732060:732059:R YP_001933665.1|Treponema_pallidum_SS14_uid58977|TPASS_0668 NC_010741.1 upstream YP_001933666.1 R 735569 735686 GTGGTACGCTGCGAGCAAAAACCCTGCAAGGGTGGATAAAAATATATAACGTGTCAACAATCCTAGAATGCTGTGCTGTAGCTCCGACTGCTTATCGGGTGCACCGTTTTTTGTTATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:735569:735686:R YP_001933666.1|Treponema_pallidum_SS14_uid58977|dnaE NC_010741.1 upstream YP_001933667.1 R 736913 736913 C Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:736913:736913:R YP_001933667.1|Treponema_pallidum_SS14_uid58977|ddl NC_010741.1 upstream YP_001933668.1 R 737949 737978 GTTGTTGTCCGCTCTCTGCGCGCGGGGAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:737949:737978:R YP_001933668.1|Treponema_pallidum_SS14_uid58977|TPASS_0671 NC_010741.1 upstream YP_001933669.1 R 739368 739501 TATTCTCAGTTAACGCGGGCTATAGGGAAAAGAGGTATGCAGGGGATGTGTTCAAAGGCGGGCGCGATCTCTGTGAGGTCGCCGCGGGTGCTGACAGTATGCTAGACAGGGGGGAAGGTGAGCGGCGCGTCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:739368:739501:R YP_001933669.1|Treponema_pallidum_SS14_uid58977|glyS NC_010741.1 upstream YP_001933670.1 R 741116 741292 TCTTTCATAAAAAACCTGTCTGTGCAATCAACCGCGTGAAGCGGCATCCTGCGTGGTAGGAAGGGGAAGACAGGGAGGCGGTCACGGTGCATGAGGAGTGTAATTTTCAGGGCCTCACAGGGATGCTTGCGCCCCGGAGGGGGATGTGCGATAATCGGCCCCCGGGGAGGGCGAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:741116:741292:R YP_001933670.1|Treponema_pallidum_SS14_uid58977|gltX NC_010741.1 upstream YP_001933671.1 D 741116 741292 CGCTCGCCCTCCCCGGGGGCCGATTATCGCACATCCCCCTCCGGGGCGCAAGCATCCCTGTGAGGCCCTGAAAATTACACTCCTCATGCACCGTGACCGCCTCCCTGTCTTCCCCTTCCTACCACGCAGGATGCCGCTTCACGCGGTTGATTGCACAGACAGGTTTTTTATGAAAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:741116:741292:D YP_001933671.1|Treponema_pallidum_SS14_uid58977|TPASS_0674 NC_010741.1 upstream YP_001933672.1 D 741902 741906 GCCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:741902:741906:D YP_001933672.1|Treponema_pallidum_SS14_uid58977|TPASS_0675 NC_010741.1 upstream YP_001933673.1 R 743196 743216 AGGCACGAAGGGGAGGTCGAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:743196:743216:R YP_001933673.1|Treponema_pallidum_SS14_uid58977|TPASS_0676 NC_010741.1 upstream YP_001933674.1 R 743826 743914 TGCGCGCAGCATAACAGCGAGGGTGTTTTTGTGCAATTGCTTATCTCACTCTGCACTGTTGTCGTAGGATCCTGTAAGAAGCGTGCTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:743826:743914:R YP_001933674.1|Treponema_pallidum_SS14_uid58977|TPASS_0677 NC_010741.1 upstream YP_001933675.1 D 743987 744078 TTTCGGGGATAGAAAGGTTTGACGAGGCGTTGCCCGCAGGGCGGGGTATGCGCAGGGTGCACAGCGGGGGAGTGTTCCCCTAAGAGAACAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:743987:744078:D YP_001933675.1|Treponema_pallidum_SS14_uid58977|TPASS_0678 NC_010741.1 upstream YP_001933676.1 D 744999 744998 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:744999:744998:D YP_001933676.1|Treponema_pallidum_SS14_uid58977|TPASS_0679 NC_010741.1 upstream YP_001933677.1 R 746416 746465 ATATGTTTTTGCAACGTTTATAAAAAGAGACAAAGGGAGGAAGGCGCGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:746416:746465:R YP_001933677.1|Treponema_pallidum_SS14_uid58977|gcp NC_010741.1 upstream YP_001933678.1 R 747600 747627 TGGGTAAGAATAGGGAGCGTAGGCGCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:747600:747627:R YP_001933678.1|Treponema_pallidum_SS14_uid58977|alr NC_010741.1 upstream YP_001933679.1 R 748231 748322 AGTACCGTTATACGGCGTGTTTGCCTTTTGTGCGAGCACGATGTGTGGGAGCTGTCAGTGTAACACATAGCATGGGGGGCGTGTAGGAAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:748231:748322:R YP_001933679.1|Treponema_pallidum_SS14_uid58977|ftsJ NC_010741.1 upstream YP_001933680.1 D 748231 748322 ACCTTCCTACACGCCCCCCATGCTATGTGTTACACTGACAGCTCCCACACATCGTGCTCGCACAAAAGGCAAACACGCCGTATAACGGTACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:748231:748322:D YP_001933680.1|Treponema_pallidum_SS14_uid58977|TPASS_0683 NC_010741.1 upstream YP_001933681.1 D 749418 749709 CTTTACCGCGTCGCATGTACTGAAGGTGATCACAAAAGGTGACCCCGTGCGACAGAAACGGACTGGAGGCACGGCACGACAAGTCGCCCGGAAGAAGACTTGAGAAAGACGCGACACGCGCAAAGAAGTTTGACAGAAATCTTGCCATTAGTTACAATGGGGCACGCTGTTTCGTGCGACGGCGTCAAGAGTTTCGCGCGGGCTAAAGTGGGTTGGTCGCGTGTGGGTGCAGCGCGCTGTACTTGTCGCGCGTTATTTCGTGCATTGAGCGTTCTAAGGTGGTTTAGCGCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:749418:749709:D YP_001933681.1|Treponema_pallidum_SS14_uid58977|mglB2 NC_010741.1 upstream YP_001933682.1 D 750922 751040 GCAGCCGGGTTTGGACGTGCGTTGGGTAGCTGCTGTTCCTGGTGCACGTCCTGTTCGTTGAATAGGTAGGGTCTACCGACCTCGCACCGCTTTCGCGCGCGAGAGGAGTGATAGTTGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:750922:751040:D YP_001933682.1|Treponema_pallidum_SS14_uid58977|mglA NC_010741.1 upstream YP_001933683.1 D 752532 752545 GGAGGAGCAGATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:752532:752545:D YP_001933683.1|Treponema_pallidum_SS14_uid58977|mglC NC_010741.1 upstream YP_001933684.1 R 756330 756384 TTTCGGTGAATGATGTTCTTGCGTTACCATTACGTATGCTCGCACACTGCCTGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:756330:756384:R YP_001933684.1|Treponema_pallidum_SS14_uid58977|recG NC_010741.1 upstream YP_001933685.1 R 757399 757398 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:757399:757398:R YP_001933685.1|Treponema_pallidum_SS14_uid58977|mccF NC_010741.1 upstream YP_001933686.1 R 758782 758816 GTGATGTCTGAGTCTGTAAAGGAGATGGCCGGAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:758782:758816:R YP_001933686.1|Treponema_pallidum_SS14_uid58977|engA NC_010741.1 upstream YP_001933687.1 R 759399 759398 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:759399:759398:R YP_001933687.1|Treponema_pallidum_SS14_uid58977|TPASS_0690 NC_010741.1 upstream YP_001933688.1 R 760150 760176 TCAGTGGCCGCCAGCGCGTGGAAATAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:760150:760176:R YP_001933688.1|Treponema_pallidum_SS14_uid58977|TPASS_0691 NC_010741.1 upstream YP_001933689.1 R 761401 761468 TACTATTTGTGTGCAGGTGGTAGCGCGTCTCTTGCGCCTTGCGCGGGGTTTTTCATGGGAGGCTTGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:761401:761468:R YP_001933689.1|Treponema_pallidum_SS14_uid58977|recA NC_010741.1 upstream YP_001933690.1 R 762984 763142 GTATGGGTGGTGTCGGCGTCGTCCTGCACGTCCCTAACGAAAAGAAGACGTGATGTGTCTTTGGTGGATATCGTAGGGTGGCTGTAACGAAGGGCCCGTGACGGTACTTTAGCACGCGGCTGTGGTGTGCGCTGCAGAATAAAGAGGTGTAGATTATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:762984:763142:R YP_001933690.1|Treponema_pallidum_SS14_uid58977|TPASS_0693 NC_010741.1 upstream YP_001933691.1 D 762984 763142 GTATAATCTACACCTCTTTATTCTGCAGCGCACACCACAGCCGCGTGCTAAAGTACCGTCACGGGCCCTTCGTTACAGCCACCCTACGATATCCACCAAAGACACATCACGTCTTCTTTTCGTTAGGGACGTGCAGGACGACGCCGACACCACCCATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:762984:763142:D YP_001933691.1|Treponema_pallidum_SS14_uid58977|TPASS_0694 NC_010741.1 upstream YP_001933692.1 D 763821 763907 TGCCTTATTCCTCCATTCTAATCACACACGTGCATGCACCAAGAGGACAGCGCCGTGCTATCTTCCCAGAAAGGAGGATGAAAACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:763821:763907:D YP_001933692.1|Treponema_pallidum_SS14_uid58977|TPASS_0695 NC_010741.1 upstream YP_001933693.1 R 766526 766586 CTTGTGCTGCTGGGGTGGGGTATGCGCGCACGCGCGTGCGCGTTCCTGCGCGCGCTTCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:766526:766586:R YP_001933693.1|Treponema_pallidum_SS14_uid58977|TPASS_0696 NC_010741.1 upstream YP_001933694.1 R 767196 767225 TGTATGAGTGGTTGGTGTGAGGGTGAGGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:767196:767225:R YP_001933694.1|Treponema_pallidum_SS14_uid58977|TPASS_0697 NC_010741.1 upstream YP_001933695.1 R 767772 767771 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:767772:767771:R YP_001933695.1|Treponema_pallidum_SS14_uid58977|TPASS_0698 NC_010741.1 upstream YP_001933696.1 R 767879 767883 GGCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:767879:767883:R YP_001933696.1|Treponema_pallidum_SS14_uid58977|TPASS_0699 NC_010741.1 upstream YP_001933697.1 R 768277 768413 CGCGGTTTGGACATTAACAGTCCGCTCCTGCGGGGGCAGATTAGGAGTTTGTTTTCTAGAAGTTGTTTTTCAATAAAGGGCCGGTTCTAAGTCACGCTCTCCCTTCTGCCGATAGAGGGGGCGGAGGTGGGGATGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:768277:768413:R YP_001933697.1|Treponema_pallidum_SS14_uid58977|TPASS_0700 NC_010741.1 upstream YP_001933698.1 R 768618 768696 CGGTGCGCATTCTACACAGGGGGGATCGTGTACGTCAAGCAGTGCTTGTTGCGCGGCGCGATAGGTGTTACGATGACCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:768618:768696:R YP_001933698.1|Treponema_pallidum_SS14_uid58977|TPASS_0701 NC_010741.1 upstream YP_001933699.1 R 769324 769337 AGGCGCTCTGGACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:769324:769337:R YP_001933699.1|Treponema_pallidum_SS14_uid58977|TPASS_0702 NC_010741.1 upstream YP_001933700.1 R 770019 770018 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:770019:770018:R YP_001933700.1|Treponema_pallidum_SS14_uid58977|TPASS_0703 NC_010741.1 upstream YP_001933701.1 R 772139 772280 GAAAGATTGGGCAGTCTCTTTAGAGGAAGATGGCTTCGCCGACGGAAAGCGTCGCGGCACGCGGGGCGCGTGTGTGGTGCGTGTGGCCGTTCTGGCGGGTCCTCTTGCGTCGGGTGGTACTCTCTCGGAGGAAGGGCTACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:772139:772280:R YP_001933701.1|Treponema_pallidum_SS14_uid58977|recJ NC_010741.1 upstream YP_001933702.1 R 774936 775231 TACGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCGACGCGCTCCTCCTCTCTGTGGCACTACCGTTGGGCGTGGGGTTCGCACCAGGCTCAAGGTTTTGCAGGTAGAACCGATACTGGGGGCGCCGGCTGCGTGGTTCCCCTCCCACCTATCGCGCGGTCGGTACGTAGTGGGGCCGGTTTGAGAAAGCCGGCCTTTTTGTGTGTCTGCCTGAGTGCATCGTGCGGTGTGCGCCGTTGACGGTCTTCTGCCTCTTGCCTTGAAGTTTTCGCCTTTTTGTGTTCCGCTCTTGGCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:774936:775231:R YP_001933702.1|Treponema_pallidum_SS14_uid58977|pbp2 NC_010741.1 upstream YP_001933703.1 R 776159 776219 GCGGCTGCGTGTGATGCGTCTGTGCCCATTTTCTCCGTTCTCCTTTCTCCTGCGCGTGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:776159:776219:R YP_001933703.1|Treponema_pallidum_SS14_uid58977|TPASS_0706 NC_010741.1 upstream YP_001933704.1 R 776700 776764 GGAGCTAGTCTGCAGCTGGTTTTTTGTTTCGTCAAGGACCTGTTTCCAAGCGTGTAGTGTGAGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:776700:776764:R YP_001933704.1|Treponema_pallidum_SS14_uid58977|TPASS_0707 NC_010741.1 upstream YP_001933705.1 D 776700 776764 AGCTCACACTACACGCTTGGAAACAGGTCCTTGACGAAACAAAAAACCAGCTGCAGACTAGCTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:776700:776764:D YP_001933705.1|Treponema_pallidum_SS14_uid58977|TPASS_0708 NC_010741.1 upstream YP_001933706.1 D 777281 777335 CGAGCCGGCTTGTATTTTCATTCTGAAATCAGCTATAACAGTAGAGGGCACGGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:777281:777335:D YP_001933706.1|Treponema_pallidum_SS14_uid58977|TPASS_0709 NC_010741.1 upstream YP_001933707.1 D 778125 778132 TACTCCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:778125:778132:D YP_001933707.1|Treponema_pallidum_SS14_uid58977|TPASS_0710 NC_010741.1 upstream YP_001933708.1 D 780104 780139 GTTTTCCTTATACGCAGCGAAAATGAGGAATACGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:780104:780139:D YP_001933708.1|Treponema_pallidum_SS14_uid58977|TPASS_0711 NC_010741.1 upstream YP_001933709.1 R 781642 781641 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:781642:781641:R YP_001933709.1|Treponema_pallidum_SS14_uid58977|ylxH1 NC_010741.1 upstream YP_001933710.1 R 782927 782960 TCTTCGGGCACAAGATGGGTGGAGGGTTTGATAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:782927:782960:R YP_001933710.1|Treponema_pallidum_SS14_uid58977|flhF NC_010741.1 upstream YP_001933711.1 R 785085 785092 CCCATACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:785085:785092:R YP_001933711.1|Treponema_pallidum_SS14_uid58977|flhA NC_010741.1 upstream YP_001933712.1 R 786224 786223 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:786224:786223:R YP_001933712.1|Treponema_pallidum_SS14_uid58977|flhB NC_010741.1 upstream YP_001933713.1 R 787018 787029 TGGATATGTGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:787018:787029:R YP_001933713.1|Treponema_pallidum_SS14_uid58977|fliR NC_010741.1 upstream YP_001933714.1 R 787315 787332 CATACAGGACGGGAGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:787315:787332:R YP_001933714.1|Treponema_pallidum_SS14_uid58977|fliQ NC_010741.1 upstream YP_001933715.1 R 788149 788148 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:788149:788148:R YP_001933715.1|Treponema_pallidum_SS14_uid58977|fliP NC_010741.1 upstream YP_001933716.1 R 788934 788933 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:788934:788933:R YP_001933716.1|Treponema_pallidum_SS14_uid58977|TPASS_0719 NC_010741.1 upstream YP_001933717.1 R 789916 789915 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:789916:789915:R YP_001933717.1|Treponema_pallidum_SS14_uid58977|fliY NC_010741.1 upstream YP_001933718.1 R 790943 790963 CGGAAAGATCACGGGGATGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:790943:790963:R YP_001933718.1|Treponema_pallidum_SS14_uid58977|fliM NC_010741.1 upstream YP_001933719.1 R 791513 791512 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:791513:791512:R YP_001933719.1|Treponema_pallidum_SS14_uid58977|fliL NC_010741.1 upstream YP_001933720.1 R 791626 791625 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:791626:791625:R YP_001933720.1|Treponema_pallidum_SS14_uid58977|TPASS_0723 NC_010741.1 upstream YP_001933721.1 R 792339 792343 TGCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:792339:792343:R YP_001933721.1|Treponema_pallidum_SS14_uid58977|motB NC_010741.1 upstream YP_001933722.1 R 793124 793138 GACACGGGGGAAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:793124:793138:R YP_001933722.1|Treponema_pallidum_SS14_uid58977|motA NC_010741.1 upstream YP_001933723.1 R 793337 793393 TGTGTCGACTGTGTGAAAATGTATCTTAAGCGGCAGGTGGCGTGATGGGGATGAGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:793337:793393:R YP_001933723.1|Treponema_pallidum_SS14_uid58977|flbD NC_010741.1 upstream YP_001933724.1 R 794786 794855 CAGTTGTATGGTTTGTGAACAGAGAAAGAGAGATTAGGAAAATGAGTCACATGAGGAGGACACAGAGCAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:794786:794855:R YP_001933724.1|Treponema_pallidum_SS14_uid58977|flgE NC_010741.1 upstream YP_001933725.1 R 795318 795392 ATAGGCGCGCCGGTTTTGCCTACCCTGTAGGGGGGTCAGCGTACACAACCGGTGAAAAAAGAGGAGGGCCGGGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:795318:795392:R YP_001933725.1|Treponema_pallidum_SS14_uid58977|flgD NC_010741.1 upstream YP_001933726.1 R 797037 797036 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:797037:797036:R YP_001933726.1|Treponema_pallidum_SS14_uid58977|tap1 NC_010741.1 upstream YP_001933727.1 D 797005 797004 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:797005:797004:D YP_001933727.1|Treponema_pallidum_SS14_uid58977|TPASS_0730 NC_010741.1 upstream YP_001933728.1 D 798103 798121 GAGAGACGATACTTGCGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:798103:798121:D YP_001933728.1|Treponema_pallidum_SS14_uid58977|TPASS_0731 NC_010741.1 upstream YP_001933729.1 R 799745 799839 ACGACGCCGAGCATACGGTGTTTCTTGGGCTTCCGTCTAGTGTCCGTGCGTGTTCGGTCCTTGCGCTGTTGCGTGCGCGTGTCTATACTGGGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:799745:799839:R YP_001933729.1|Treponema_pallidum_SS14_uid58977|folD NC_010741.1 upstream YP_001933730.1 D 799745 799839 GCGCCCAGTATAGACACGCGCACGCAACAGCGCAAGGACCGAACACGCACGGACACTAGACGGAAGCCCAAGAAACACCGTATGCTCGGCGTCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:799745:799839:D YP_001933730.1|Treponema_pallidum_SS14_uid58977|TPASS_0733 NC_010741.1 upstream YP_001933731.1 R 801234 801314 CGGGTGCTGCATGCGCTGAGCGTACACGCGCGAGGTTACCGAAACGTGTGGGTCTAGGCCCCACGAAGGGAGGGAGTGACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:801234:801314:R YP_001933731.1|Treponema_pallidum_SS14_uid58977|deoD NC_010741.1 upstream YP_001933732.1 R 802872 802873 GT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:802872:802873:R YP_001933732.1|Treponema_pallidum_SS14_uid58977|gltA NC_010741.1 upstream YP_001933733.1 R 803717 803949 GTAAACCTCCCCGACACGTATATCTGTTCATCGGACCCTTCTCGGCGCCGATGGCGTTTTGCTTGAATGAGGACTGCACGCAAAACCTGCCAGGAAACAATGATGAGAAAAGCAGCGGTCGGCGCGTTAGTTGCCTTGTGCGACAGAGCTGAAGAAAGGCTTTTCTTTGACAAATCTGCATTCGCTGTACTATCATCCATCCCTCCGAGAGTTTGGTCGAAGGAGGCATGGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:803717:803949:R YP_001933733.1|Treponema_pallidum_SS14_uid58977|hydG NC_010741.1 upstream YP_001933734.1 D 803717 803949 AGCCATGCCTCCTTCGACCAAACTCTCGGAGGGATGGATGATAGTACAGCGAATGCAGATTTGTCAAAGAAAAGCCTTTCTTCAGCTCTGTCGCACAAGGCAACTAACGCGCCGACCGCTGCTTTTCTCATCATTGTTTCCTGGCAGGTTTTGCGTGCAGTCCTCATTCAAGCAAAACGCCATCGGCGCCGAGAAGGGTCCGATGAACAGATATACGTGTCGGGGAGGTTTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:803717:803949:D YP_001933734.1|Treponema_pallidum_SS14_uid58977|msmE NC_010741.1 upstream YP_001933735.1 R 805642 805641 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:805642:805641:R YP_001933735.1|Treponema_pallidum_SS14_uid58977|TPASS_0738 NC_010741.1 upstream YP_001933736.1 R 806835 806907 CGGGTGGCAGTCGGGCAAAAGTAGGGCAGTGTGTGTATCTGCCGCAGTTCGACGAGAGGCCAGGGAGTGTGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:806835:806907:R YP_001933736.1|Treponema_pallidum_SS14_uid58977|TPASS_0739 NC_010741.1 upstream YP_001933737.1 R 807475 807601 GCCTCTGCCTTCTTTCTCCGGAGTGGACGATTCTTCCTGTTCTTCTCGTTTTCTTTCTTTCCTTGGACAGGCGCAGATGCCAGCGTTCTCTTTTGTGTCTGCAGATATGACGGCGCTGATTGCGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:807475:807601:R YP_001933737.1|Treponema_pallidum_SS14_uid58977|TPASS_0740 NC_010741.1 upstream YP_001933738.1 R 808217 808216 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:808217:808216:R YP_001933738.1|Treponema_pallidum_SS14_uid58977|TPASS_0741 NC_010741.1 upstream YP_001933739.1 R 809344 809460 GCTTTTATAGAGGGAACCAGGTGCCTCCTGTGCTTTGTGTCTGTGGTGTAAGAAGGGTCAGGGGGTATTTGCGTGTCTGTGGGATCGTAGGGGGCGTGCACAGGTTTTTGAGAGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:809344:809460:R YP_001933739.1|Treponema_pallidum_SS14_uid58977|obgE NC_010741.1 upstream YP_001933740.1 R 809725 809754 CGTCGCGGTTAAGACAAAACGGGGGGTAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:809725:809754:R YP_001933740.1|Treponema_pallidum_SS14_uid58977|rpmA NC_010741.1 upstream YP_001933741.1 R 810082 810093 GCTCTGGTCCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:810082:810093:R YP_001933741.1|Treponema_pallidum_SS14_uid58977|TPASS_0744 NC_010741.1 upstream YP_001933742.1 R 810412 810517 GGTGTCGTTCGTGCTTGGTGAGCGTCTCTGTGCGTTCCACTAACGGTGCGAGGGATGGCTGCGTCTGCGTGGTTAGAGGTGTAGCTGGGTGTTTTTTGGAGGTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:810412:810517:R YP_001933742.1|Treponema_pallidum_SS14_uid58977|rplU NC_010741.1 upstream YP_001933743.1 R 813224 813232 GAGTGCACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:813224:813232:R YP_001933743.1|Treponema_pallidum_SS14_uid58977|TPASS_0746 NC_010741.1 upstream YP_001933744.1 R 814268 814355 CGAGATTGTAGATAGACTTTGTCGTGATCCGAAGCTCCCTGGAACTTTTCTGTTTCGGGGAGCTTTTTAATCATCAAAGGAGTGTTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:814268:814355:R YP_001933744.1|Treponema_pallidum_SS14_uid58977|TPASS_0747 NC_010741.1 upstream YP_001933745.1 R 816393 816392 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:816393:816392:R YP_001933745.1|Treponema_pallidum_SS14_uid58977|cfpA NC_010741.1 upstream YP_001933746.1 R 816592 816591 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:816592:816591:R YP_001933746.1|Treponema_pallidum_SS14_uid58977|TPASS_0749 NC_010741.1 upstream YP_001933747.1 D 816561 816560 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:816561:816560:D YP_001933747.1|Treponema_pallidum_SS14_uid58977|TPASS_0750 NC_010741.1 upstream YP_001933748.1 D 817233 817268 GCTGGTGCCTCCGTACTGCGTGCAAGGAAGCGTCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:817233:817268:D YP_001933748.1|Treponema_pallidum_SS14_uid58977|TPASS_0751 NC_010741.1 upstream YP_001933749.1 R 819263 819342 CCAGACTGCAATGACACAAAGTCGCGTCTAGGGCTCGCAGGACGGCGCGCGTGTGCGTGTTTGGGTTCTCTGCTTAATGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:819263:819342:R YP_001933749.1|Treponema_pallidum_SS14_uid58977|TPASS_0752 NC_010741.1 upstream YP_001933750.1 R 819628 819627 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:819628:819627:R YP_001933750.1|Treponema_pallidum_SS14_uid58977|TPASS_0753 NC_010741.1 upstream YP_001933751.1 R 820995 821035 GATTTAGAAGAGAGCAGGATTGTTCAGGCAGAGGGAAAGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:820995:821035:R YP_001933751.1|Treponema_pallidum_SS14_uid58977|TPASS_0754 NC_010741.1 upstream YP_001933752.1 R 821579 821777 GTGATACACGCCAGGCGTGAGATTTCTACGCAACGCATGATGCGTACCCCAAGTGTGTCTTGTTACAGAGAAAGGGGAGGTTGGTTTGTCCGAAGAAATTCTCACGATAGAAGAGGTTGCGCGGTACCTGCGAATTTCTGAACGTACCGTGTATGAGTGGGCGCAAAAGGGGAAGATTCCGTCAGGAAAAGTGGGCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:821579:821777:R YP_001933752.1|Treponema_pallidum_SS14_uid58977|ptsN2 NC_010741.1 upstream YP_001933753.1 R 822738 822740 CCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:822738:822740:R YP_001933753.1|Treponema_pallidum_SS14_uid58977|fmt NC_010741.1 upstream YP_001933754.1 R 823230 823269 GCGGGTATGAGTTTCTCTTGGGTAAGAGCGGGAAGAGGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:823230:823269:R YP_001933754.1|Treponema_pallidum_SS14_uid58977|def NC_010741.1 upstream YP_001933755.1 R 823480 823597 GACACGTAGGGTGTGCGTGCAGGGGAGGCAGGAGTGCTTTCGGAAGAAACGATTGACAGGGGACGTCTTTTGCGCTAGCCTACCCCTGGTAGGCTGTGTTTTTTTCAGGGGAGGGTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:823480:823597:R YP_001933755.1|Treponema_pallidum_SS14_uid58977|rpsU NC_010741.1 upstream YP_001933756.1 D 823480 823597 CGACCCTCCCCTGAAAAAAACACAGCCTACCAGGGGTAGGCTAGCGCAAAAGACGTCCCCTGTCAATCGTTTCTTCCGAAAGCACTCCTGCCTCCCCTGCACGCACACCCTACGTGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:823480:823597:D YP_001933756.1|Treponema_pallidum_SS14_uid58977|TPASS_0759 NC_010741.1 upstream YP_001933757.1 D 823674 823673 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:823674:823673:D YP_001933757.1|Treponema_pallidum_SS14_uid58977|pbp3 NC_010741.1 upstream YP_001933758.1 D 825613 825612 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:825613:825612:D YP_001933758.1|Treponema_pallidum_SS14_uid58977|TPASS_0761 NC_010741.1 upstream YP_001933759.1 D 826492 826519 TTATTGCGGTTGATACCGCGTTGCGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:826492:826519:D YP_001933759.1|Treponema_pallidum_SS14_uid58977|TPASS_0762 NC_010741.1 upstream YP_001933760.1 R 828705 828704 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:828705:828704:R YP_001933760.1|Treponema_pallidum_SS14_uid58977|TPASS_0763 NC_010741.1 upstream YP_001933761.1 D 828663 828662 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:828663:828662:D YP_001933761.1|Treponema_pallidum_SS14_uid58977|TPASS_0764 NC_010741.1 upstream YP_001933762.1 R 831650 832049 GGTGAAGTTTCGGTGAACGCGCGCATGAGGGTAAGCAATAGCCGCGCGCGTGTGTTTTTTTGCAGCACCGTGCATACCGCCCCAGCGGACGTCGCTAAGCTGCGCCGTACGGCTCTCACACAGTCTGTCGACGTTTCACCTTCTTTTCGTGTATCATGGGCCGGCGTGCCCGCGCGCACTGCAAAAGGGAGCCTTAACTGAGATGAATACGCGCTACAAACAGTCAGATGATTCTTCAGATCCATTCGGGTTTTTTAAGTTCTCCCCCCGCCCTCAAAAAGGCCCTTCGTCGTCACGCGAAAGACCTCCGCGCAGAAATTCGCGTAAGGTGCTCTCGCTCGTGCTCCTTGCTCTTTGTGCGCTGCTTGCTCTTGCAAACCACTTTTTGTTTTCCCGTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:831650:832049:R YP_001933762.1|Treponema_pallidum_SS14_uid58977|ftsH NC_010741.1 upstream YP_001933763.1 D 831652 832051 CACGGGAAAACAAAAAGTGGTTTGCAAGAGCAAGCAGCGCACAAAGAGCAAGGAGCACGAGCGAGAGCACCTTACGCGAATTTCTGCGCGGAGGTCTTTCGCGTGACGACGAAGGGCCTTTTTGAGGGCGGGGGGAGAACTTAAAAAACCCGAATGGATCTGAAGAATCATCTGACTGTTTGTAGCGCGTATTCATCTCAGTTAAGGCTCCCTTTTGCAGTGCGCGCGGGCACGCCGGCCCATGATACACGAAAAGAAGGTGAAACGTCGACAGACTGTGTGAGAGCCGTACGGCGCAGCTTAGCGACGTCCGCTGGGGCGGTATGCACGGTGCTGCAAAAAAACACACGCGCGCGGCTATTGCTTACCCTCATGCGCGCGTTCACCGAAACTTCACCTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:831652:832051:D YP_001933763.1|Treponema_pallidum_SS14_uid58977|TPASS_0766 NC_010741.1 upstream YP_001933764.1 D 832934 833143 ACTGCAGATTACGCAAAACTAGCGGTTCTAGCCCGGAGGGGTGAAGCGCGCCGTGTGCATCGGCACGACCCCGCCAGAGAAGGCGGGCGCCCGTCTTCCCCGCGGTGGCGGGCTGCGCCCTGCTACCCCGTCTGCTGTGGAGCGGGGCCTTGTCTTTTTCCTGAGGGCTTGTTACGCTGCGCGCCAGTCCCCGAGGAAGAAGGAATTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:832934:833143:D YP_001933764.1|Treponema_pallidum_SS14_uid58977|fusA2 NC_010741.1 upstream YP_001933765.1 D 835232 835369 GCGTAACGTGCTAGGCGGCGCGTCCTTCTCGACGCGGTGGCGAAGTCTTGAATAAGGGGGCTTTCTGGTGTACCCTCCCGGGCCGAACGGTACTCTCCTCACATGAGCCGAGGAGGTATCACGTGGGAGGTTAACATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:835232:835369:D YP_001933765.1|Treponema_pallidum_SS14_uid58977|tmpA NC_010741.1 upstream YP_001933766.1 D 836404 836403 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:836404:836403:D YP_001933766.1|Treponema_pallidum_SS14_uid58977|tmpB NC_010741.1 upstream YP_001933767.1 D 837382 837425 CGGATAGACAAGAGCGTATACGCTTTTTCCCCTTTTCCACAAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:837382:837425:D YP_001933767.1|Treponema_pallidum_SS14_uid58977|TPASS_0770 NC_010741.1 upstream YP_001933768.1 R 841178 841180 GCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:841178:841180:R YP_001933768.1|Treponema_pallidum_SS14_uid58977|TPASS_0771 NC_010741.1 upstream YP_001933769.1 D 841178 841180 CGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:841178:841180:D YP_001933769.1|Treponema_pallidum_SS14_uid58977|TPASS_0772 NC_010741.1 upstream YP_001933770.1 R 843242 843253 GAGGTGGGATTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:843242:843253:R YP_001933770.1|Treponema_pallidum_SS14_uid58977|htrA1 NC_010741.1 upstream YP_001933771.1 D 843554 843585 CTTGCATCCTGCTACGCCCTAAGAGAAAAGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:843554:843585:D YP_001933771.1|Treponema_pallidum_SS14_uid58977|mgtC NC_010741.1 upstream YP_001933772.1 D 844261 844339 ATCCTGTGCGTTCATTTCCCTCCTTTCCACCCCATGACCTCTTGCACTTTTTAAACTACCTCTCTTTACTGGCACCCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:844261:844339:D YP_001933772.1|Treponema_pallidum_SS14_uid58977|nth NC_010741.1 upstream YP_001933773.1 R 845829 845880 GTTTTTGATGTCAGTGTTTCGTGCTTGATGTGTGAGGTARGGACGTAGGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:845829:845880:R YP_001933773.1|Treponema_pallidum_SS14_uid58977|TPASS_0776 NC_010741.1 upstream YP_001933774.1 R 846106 846173 GACGCGTCCCTGTCTCCGTGTGTAAATTGTTAGCACGGGCAGGGTGCGTGTTGAAGAAGAGGGGGCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:846106:846173:R YP_001933774.1|Treponema_pallidum_SS14_uid58977|TPASS_0777 NC_010741.1 upstream YP_001933775.1 R 847086 847085 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:847086:847085:R YP_001933775.1|Treponema_pallidum_SS14_uid58977|mazG NC_010741.1 upstream YP_001933776.1 R 847727 847772 ACTGGCACGCAGGATTTTTAACAACTGATATGGAGGTGCGTAGGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:847727:847772:R YP_001933776.1|Treponema_pallidum_SS14_uid58977|dedA NC_010741.1 upstream YP_001933777.1 R 849813 849848 GGCGTTCGTAGTTTTTTCATTTGTACACCGGGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:849813:849848:R YP_001933777.1|Treponema_pallidum_SS14_uid58977|nadE NC_010741.1 upstream YP_001933778.1 R 850311 850355 TACAAAAAACAAAGTGTATCTCAATCCCTTGCTCCTGCTGCTTCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:850311:850355:R YP_001933778.1|Treponema_pallidum_SS14_uid58977|TPASS_0781 NC_010741.1 upstream YP_001933779.1 R 850800 850827 GGGGTAGGGACAGAGGGGGTGTGCCGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:850800:850827:R YP_001933779.1|Treponema_pallidum_SS14_uid58977|TPASS_0782 NC_010741.1 upstream YP_001933780.1 R 851962 852126 TACCGCTCCTTTACGCTACAACGGGCGTAGCCGGACAGATGCCCGGGCAGAAAAAGAAGGACAGACAACGCGTCCCAAGTAGGAAAGAAGGACGCACCTTAAAAGCAACAACCCCGCCCCCACAGCCGCGAAGCACAACAAACCTCGCAAGAAGGGCGAACGAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:851962:852126:R YP_001933780.1|Treponema_pallidum_SS14_uid58977|TPASS_0783 NC_010741.1 upstream YP_001933781.1 D 851962 852126 GTTCGTTCGCCCTTCTTGCGAGGTTTGTTGTGCTTCGCGGCTGTGGGGGCGGGGTTGTTGCTTTTAAGGTGCGTCCTTCTTTCCTACTTGGGACGCGTTGTCTGTCCTTCTTTTTCTGCCCGGGCATCTGTCCGGCTACGCCCGTTGTAGCGTAAAGGAGCGGTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:851962:852126:D YP_001933781.1|Treponema_pallidum_SS14_uid58977|TPASS_0784 NC_010741.1 upstream YP_001933782.1 D 852723 852722 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:852723:852722:D YP_001933782.1|Treponema_pallidum_SS14_uid58977|TPASS_0785 NC_010741.1 upstream YP_001933783.1 D 853410 853540 CATTTCAACGCTTCCTGTCTGCCGCGCGCAGACTCCGTGCAAAGCACGATGTCACATATACTTTAAAGGCAGAGACAGAGAAAGAAAAAAATATTTCCTGGAATGAATCTCCACCGGGAGAAAAGCGCCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:853410:853540:D YP_001933783.1|Treponema_pallidum_SS14_uid58977|TPASS_0786 NC_010741.1 upstream YP_001933784.1 R 854721 854801 GAGTAGGGGAGCCTAGCAGTTTGTGTATCCCAACGCAAGAGTATTTGGGCGCGCAGTATATGGTGGTATCGTGCAGTCCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:854721:854801:R YP_001933784.1|Treponema_pallidum_SS14_uid58977|TPASS_0787 NC_010741.1 upstream YP_001933785.1 D 854721 854801 AAGGACTGCACGATACCACCATATACTGCGCGCCCAAATACTCTTGCGTTGGGATACACAAACTGCTAGGCTCCCCTACTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:854721:854801:D YP_001933785.1|Treponema_pallidum_SS14_uid58977|TPASS_0788 NC_010741.1 upstream YP_001933786.1 R 856482 856499 AACCAAAGGGAGGTATGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:856482:856499:R YP_001933786.1|Treponema_pallidum_SS14_uid58977|TPASS_0789 NC_010741.1 upstream YP_001933787.1 R 859167 859308 GTTGCCGGTTGCGTCCGGCTGTGTGTGCACTGTGGATTGAGTGGCTCTGTCCTTGTTTGAGCTTGTGCGCGGCGTAGCTGTACTTGGCGTGCACTGCCGTCTTAGCTTTCCACGGAGGGATGTGGGAGAAGATAATTAGGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:859167:859308:R YP_001933787.1|Treponema_pallidum_SS14_uid58977|TPASS_0790 NC_010741.1 upstream YP_001933788.1 R 859555 859554 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:859555:859554:R YP_001933788.1|Treponema_pallidum_SS14_uid58977|TPASS_0791 NC_010741.1 upstream YP_001933789.1 D 859540 859539 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:859540:859539:D YP_001933789.1|Treponema_pallidum_SS14_uid58977|flaB2 NC_010741.1 upstream YP_001933790.1 D 860401 860478 TTCTTCTCACCGCTTCGAAAGGCCGGCGCTGCGCGCCAGCCTTTCTTCTAAAGAGCTTGTCTACGCACCTGGGATGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:860401:860478:D YP_001933790.1|Treponema_pallidum_SS14_uid58977|TPASS_0793 NC_010741.1 upstream YP_001933791.1 R 863326 863378 CCTTTACTCCTAGGTTCAGTGAGCTGCGTAATTTTGAATCGAGGAGTACAGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:863326:863378:R YP_001933791.1|Treponema_pallidum_SS14_uid58977|metK NC_010741.1 upstream YP_001933792.1 D 863326 863378 CACTGTACTCCTCGATTCAAAATTACGCAGCTCACTGAACCTAGGAGTAAAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:863326:863378:D YP_001933792.1|Treponema_pallidum_SS14_uid58977|TPASS_0795 NC_010741.1 upstream YP_001933793.1 R 864615 864673 GGGGTGGGCAGGGTGCATTGCTTGTTTTTTTTGACTGCTGACAGTACAGTTGCACCCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:864615:864673:R YP_001933793.1|Treponema_pallidum_SS14_uid58977|TPASS_0796 NC_010741.1 upstream YP_001933794.1 R 865466 865515 GAATATTCACAGAGCATTTGGTTTTCCGTGTCGGATAGGGGGAGCGCAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:865466:865515:R YP_001933794.1|Treponema_pallidum_SS14_uid58977|proC NC_010741.1 upstream YP_001933795.1 R 867952 867983 GAAGTCTTGTTTAAATCAGAGTAGGAAACGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:867952:867983:R YP_001933795.1|Treponema_pallidum_SS14_uid58977|metG NC_010741.1 upstream YP_001933796.1 D 867952 867983 AGCGTTTCCTACTCTGATTTAAACAAGACTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:867952:867983:D YP_001933796.1|Treponema_pallidum_SS14_uid58977|TPASS_0799 NC_010741.1 upstream YP_001933797.1 D 868137 868278 TGCAAACAACATGCTCTGCCGGGAGGCTGTATGATGACCCGTGTGGTGTTTTCTGTGATACACAGGACGTGTCGCGGCGTGCTTTTCAAGGGGTGACGCATGTGCGGTCGGCCCGTGCCGTACGCTCTGTCCCTAATACGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:868137:868278:D YP_001933797.1|Treponema_pallidum_SS14_uid58977|dacC NC_010741.1 upstream YP_001933798.1 R 872242 872286 GAAGCGTACACAGGGGGGCATCCCCCACGAGGGTATGGAGAGGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:872242:872286:R YP_001933798.1|Treponema_pallidum_SS14_uid58977|clpA NC_010741.1 upstream YP_001933799.1 D 872242 872286 TTCCTCTCCATACCCTCGTGGGGGATGCCCCCCTGTGTACGCTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:872242:872286:D YP_001933799.1|Treponema_pallidum_SS14_uid58977|TPASS_0802 NC_010741.1 upstream YP_001933800.1 D 872617 872629 TATACTCGCCGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:872617:872629:D YP_001933800.1|Treponema_pallidum_SS14_uid58977|TPASS_0803 NC_010741.1 upstream YP_001933801.1 D 873839 873915 CATGACAACACCACCTCCCGTTTGCGTAAGGAAAGTAGTGTGTTGCGCACCCGTGTTTCAAAAGGAATGTAAACGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:873839:873915:D YP_001933801.1|Treponema_pallidum_SS14_uid58977|ugpC NC_010741.1 upstream YP_001933802.1 R 877210 877209 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:877210:877209:R YP_001933802.1|Treponema_pallidum_SS14_uid58977|rnb NC_010741.1 upstream YP_001933803.1 R 878703 878830 AGGGTGCGCTCCTTTCTGCGCAAGAACTGTGCGCTTCGGACCGTCGACCGCAACACACAGGCTCGCCATTGTGCATGTTCTTCGGTGAACGGTCAAGGGTGCTCATGTGTGCTTCTTAGCATTGTGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:878703:878830:R YP_001933803.1|Treponema_pallidum_SS14_uid58977|TPASS_0806 NC_010741.1 upstream YP_001933804.1 D 878703 878830 TGCACAATGCTAAGAAGCACACATGAGCACCCTTGACCGTTCACCGAAGAACATGCACAATGGCGAGCCTGTGTGTTGCGGTCGACGGTCCGAAGCGCACAGTTCTTGCGCAGAAAGGAGCGCACCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:878703:878830:D YP_001933804.1|Treponema_pallidum_SS14_uid58977|rpmF NC_010741.1 upstream YP_001933805.1 D 879020 879079 TGCCCGTGCGAGTGTGCACCTGAGCGACTGCCTTTTGCTCGCGCACAAGGAGGCTGCCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:879020:879079:D YP_001933805.1|Treponema_pallidum_SS14_uid58977|acpP NC_010741.1 upstream YP_001933806.1 D 879313 879312 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:879313:879312:D YP_001933806.1|Treponema_pallidum_SS14_uid58977|rnc NC_010741.1 upstream YP_001933807.1 D 880078 880107 CGCGTATGCTGCCCTGTAAGGATACTCTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:880078:880107:D YP_001933807.1|Treponema_pallidum_SS14_uid58977|dam NC_010741.1 upstream YP_001933808.1 R 881216 881615 ATCCGCTTGGGCGAGTGTTTCTCTTTCTGCAGCGCCCGCAATGACACAGCAAACGTGAGCATGCTGGAGGCAGCGGCGCAGCTCCTGCGGACTGAGCTCTGGTACGAGAGGGACTGCGCGGGCACCAAGGCTTACTATTGCAAAGTAGCTAACTCCCCACTGTGGACAGTTGGGGCCAAAGAGCGCAACGCAGCTTCCTGCGCGCACACCACAGCGCATCAGCAACTGGCGTGCACGGCGCACACGCTGTGCAAAGAGACGGTAGTTCAAGCAGCACCGCGAATGCGCGTCCGTAGCATGGCCTAGGAAGCAGACTGCATTTTGAGATCCAAAGTGCTGGGCACAGTGTCTGAGTGCCGCTTCAAAGGTAAGATGTGGCACGGTTCCCCTTCGACTGTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:881216:881615:R YP_001933808.1|Treponema_pallidum_SS14_uid58977|TPASS_0811 NC_010741.1 upstream YP_001933809.1 R 883913 884134 GCCGAGAGTGTATGCACGCGTAACTGATTAGTCAACGCTTTTTTAGGTGCCCTATGTATGCCGGTAAAAAATATATGATTGAATTCAGGAGAAGATACGTGTGGAATTGATTATTCCTGCCGTGCGTGCGCCTGTCATTCTCAGCGGTTAGGCCCTTCCTTTCCCTTGGTTTGTAGGGAGGTCATTCTAGTAATTCGTGTCAGAATACATTAGACTCACGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:883913:884134:R YP_001933809.1|Treponema_pallidum_SS14_uid58977|TPASS_0813 NC_010741.1 upstream YP_001933810.1 D 883913 884134 GGCGTGAGTCTAATGTATTCTGACACGAATTACTAGAATGACCTCCCTACAAACCAAGGGAAAGGAAGGGCCTAACCGCTGAGAATGACAGGCGCACGCACGGCAGGAATAATCAATTCCACACGTATCTTCTCCTGAATTCAATCATATATTTTTTACCGGCATACATAGGGCACCTAAAAAAGCGTTGACTAATCAGTTACGCGTGCATACACTCTCGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:883913:884134:D YP_001933810.1|Treponema_pallidum_SS14_uid58977|trxB NC_010741.1 upstream YP_001933811.1 D 885059 885179 AACTGCGCGTCTTTGCACTTCGGGTGTGCGTTTTTTATCCTTCGAGGGGAGGGTACTGTTCTCTCTCCCCATCCCCAACTCTTTCTGAGGAAGCTTTGGAGCTCGCGCTGGCTGCGACGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:885059:885179:D YP_001933811.1|Treponema_pallidum_SS14_uid58977|TPASS_0815 NC_010741.1 upstream YP_001933812.1 R 886901 887037 CTTGTAAGGTGCGAGGAACTCTATAAGAAGTTGGGGTACGGGGCAGAGAACGCAGGACTCCGTGTCGTTTCTTCTTTACTTCCTGGCGGAATGGTTGCTGGTCTTTCTGCTGTGAGGACGCTTTTATCTTCGCCAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:886901:887037:R YP_001933812.1|Treponema_pallidum_SS14_uid58977|TPASS_0816 NC_010741.1 upstream YP_001933813.1 R 888337 888336 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:888337:888336:R YP_001933813.1|Treponema_pallidum_SS14_uid58977|eno NC_010741.1 upstream YP_001933814.1 R 888486 888511 ATATAACGCGCCGTTGCAATACTCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:888486:888511:R YP_001933814.1|Treponema_pallidum_SS14_uid58977|TPASS_0818 NC_010741.1 upstream YP_001933815.1 R 889445 889471 CCTCCAAAAGGTTGACGTCGGAATGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:889445:889471:R YP_001933815.1|Treponema_pallidum_SS14_uid58977|TPASS_0819 NC_010741.1 upstream YP_001933816.1 R 890243 890337 GGTGCAAGTTCTTTCCGTTTAAAACCTACCCAGTCCTGACGGTTCTTCTGCATACTCAAGGATGGGGATGGTGTGGGTGTGTCTTTTGAAAGAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:890243:890337:R YP_001933816.1|Treponema_pallidum_SS14_uid58977|TPASS_0820 NC_010741.1 upstream YP_001933817.1 R 891145 891224 AATGCAGGGTGAGTCTTGATGTGCGCTTTTTCTTTGGACATTGACAGGATGGATAGAGGGACAGGGGGAGGCCGAATGAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:891145:891224:R YP_001933817.1|Treponema_pallidum_SS14_uid58977|tpn32 NC_010741.1 upstream YP_001933818.1 R 892131 892217 GGGTGTAGTGCTCTCCTGTTTTTAGGAAGGGGAGCAGGAGATTGGGGGCATATTTGCGCGCAGTACGCCCTTGCGTAGGATGCAGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:892131:892217:R YP_001933818.1|Treponema_pallidum_SS14_uid58977|TPASS_0822 NC_010741.1 upstream YP_001933819.1 R 892605 893000 GACGAAAACGCCTCATGTCGAACAGAAGGCGCACGGGCCGAGACTACCTGTTCTTGTGCCGATTCTTGCGAAGCTTCTTCTTGCGCTTGTGGGTTGCTATCTTTTGCTTTTTTCTTTTCTTTCCGCAGGGCACGTAGAAACTCCTCAGGAATCCAAGCTGGCAGGAGCGTAGCGGAAACTACCCAAATGGTCAAGGTATACTCGTGCGTAGCACAGGCTCGGAAGGAGCGAGTTTACTGAATGCGTACAGGTGGGTGACGCTTTACCCACGGACCTGATTTAGGTAGAATCAGCGCCTCTGCGGGGCTGTGCTCTGGCGCGGGCGGTTTCCGCACGCGGAGGCACGACAGGCGTCCGCACGAGAACAAAATCAGACCAACATAGGAGATGCTTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:892605:893000:R YP_001933819.1|Treponema_pallidum_SS14_uid58977|rbo NC_010741.1 upstream YP_001933820.1 D 892605 893000 GGCAAGCATCTCCTATGTTGGTCTGATTTTGTTCTCGTGCGGACGCCTGTCGTGCCTCCGCGTGCGGAAACCGCCCGCGCCAGAGCACAGCCCCGCAGAGGCGCTGATTCTACCTAAATCAGGTCCGTGGGTAAAGCGTCACCCACCTGTACGCATTCAGTAAACTCGCTCCTTCCGAGCCTGTGCTACGCACGAGTATACCTTGACCATTTGGGTAGTTTCCGCTACGCTCCTGCCAGCTTGGATTCCTGAGGAGTTTCTACGTGCCCTGCGGAAAGAAAAGAAAAAAGCAAAAGATAGCAACCCACAAGCGCAAGAAGAAGCTTCGCAAGAATCGGCACAAGAACAGGTAGTCTCGGCCCGTGCGCCTTCTGTTCGACATGAGGCGTTTTCGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:892605:893000:D YP_001933820.1|Treponema_pallidum_SS14_uid58977|dxs NC_010741.1 upstream YP_001933821.1 D 894890 894889 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:894890:894889:D YP_001933821.1|Treponema_pallidum_SS14_uid58977|TPASS_0825 NC_010741.1 upstream YP_001933822.1 D 895062 895061 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:895062:895061:D YP_001933822.1|Treponema_pallidum_SS14_uid58977|TPASS_0826 NC_010741.1 upstream YP_001933823.1 D 895546 895545 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:895546:895545:D YP_001933823.1|Treponema_pallidum_SS14_uid58977|TPASS_0827 NC_010741.1 upstream YP_001933824.1 D 896820 896819 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:896820:896819:D YP_001933824.1|Treponema_pallidum_SS14_uid58977|acpS NC_010741.1 upstream YP_001933825.1 D 897194 897193 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:897194:897193:D YP_001933825.1|Treponema_pallidum_SS14_uid58977|TPASS_0829 NC_010741.1 upstream YP_001933826.1 D 898075 898074 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:898075:898074:D YP_001933826.1|Treponema_pallidum_SS14_uid58977|truA NC_010741.1 upstream YP_001933827.1 R 900697 900718 TAGCTTGGTATGAGGTGAGGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:900697:900718:R YP_001933827.1|Treponema_pallidum_SS14_uid58977|argS NC_010741.1 upstream YP_001933828.1 R 901535 901600 GACCCAATATCGGCTGCTTTATTTTCTTTTTGCCTATATTTTTTGCAAGGCGGGGATAAGGGACGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:901535:901600:R YP_001933828.1|Treponema_pallidum_SS14_uid58977|TPASS_0832 NC_010741.1 upstream YP_001933829.1 D 901535 901600 ACGTCCCTTATCCCCGCCTTGCAAAAAATATAGGCAAAAAGAAAATAAAGCAGCCGATATTGGGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:901535:901600:D YP_001933829.1|Treponema_pallidum_SS14_uid58977|TPASS_0833 NC_010741.1 upstream YP_001933830.1 R 903631 903716 TGACACGCGGGGCGACGGTGGGGGTGCATCAGCGCGTTTTGTCTTTTTCTCGGGACTGAACCGCCTGCCCTGGATCGGGGTGTGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:903631:903716:R YP_001933830.1|Treponema_pallidum_SS14_uid58977|tyrS NC_010741.1 upstream YP_001933831.1 R 906522 906661 AAATGGGAACGCGCCTGCGCGGTTGCGTCCTCACGGGAGAGTGGGCGTCTAAAGATTCTGTGCCTTATCGCCGAAACCGGTAGGATACGCTTTTACACACACTGTACAGACGCGGCACCATACTCAGGAGGATCCGCTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:906522:906661:R YP_001933831.1|Treponema_pallidum_SS14_uid58977|TPASS_0835 NC_010741.1 upstream YP_001933832.1 R 907487 907633 TCGTGAGACCTTATGGGTGGTTTGTCAATGGGCGCCGTTTTGGAGGAAGCACTGAGCCAGTGCGCCTGCGCCGTCACTGCAGTCTGTAGGAAGGGACGTGGTATGTAGGGTATAGTAGAGGATGCTTTCTGTTTTGGATGTGAGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:907487:907633:R YP_001933832.1|Treponema_pallidum_SS14_uid58977|TPASS_0836 NC_010741.1 upstream YP_001933833.1 D 907487 907633 GCGCTCACATCCAAAACAGAAAGCATCCTCTACTATACCCTACATACCACGTCCCTTCCTACAGACTGCAGTGACGGCGCAGGCGCACTGGCTCAGTGCTTCCTCCAAAACGGCGCCCATTGACAAACCACCCATAAGGTCTCACGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:907487:907633:D YP_001933833.1|Treponema_pallidum_SS14_uid58977|thrS NC_010741.1 upstream YP_001933834.1 R 911126 911199 CGCGCTCATAGCATCGCTGTATGTGTGATGCTCTATGGACAGCGGCTTGTCCTGTGCACGGATTTTGCGCTAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:911126:911199:R YP_001933834.1|Treponema_pallidum_SS14_uid58977|TPASS_0838 NC_010741.1 upstream YP_001933835.1 R 912208 912311 TGCGCGCGATTGTACTGATGCGGCGTAATCTGGTCCACTAACTGGTGTTCAGTTTAAGGACGGAGGAAAGGCTCTACAGAGGAGAAATAGGTGAGGGGGAGAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:912208:912311:R YP_001933835.1|Treponema_pallidum_SS14_uid58977|TPASS_0839 NC_010741.1 upstream YP_001933836.1 D 912208 912311 TTTCTCCCCCTCACCTATTTCTCCTCTGTAGAGCCTTTCCTCCGTCCTTAAACTGAACACCAGTTAGTGGACCAGATTACGCCGCATCAGTACAATCGCGCGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:912208:912311:D YP_001933836.1|Treponema_pallidum_SS14_uid58977|TPASS_0840 NC_010741.1 upstream YP_001933837.1 R 916081 916391 TCAGCTATCTTAAGTGTGCGCGGTGTGCTGATAGTACATGCAGGGAGCAGTTTGTGCACGGTAGGCAGCGTGTAAGTGTACGTGGCGGGCACAGGTGAAGAGGGGATAAACTCGTAACCATATCGCTGTGTGCTGCTTTTAACCCGGGCTGTGTCGGTAGGGGTTTGGGTACGCGCAGGGACGTGGAGGGACTCATGAACATATTGTTTACCTCGTTTGTGTGTGGGGTACATGCGGTATGCCGCAGTTTTTTTACAGCAGCGGCGTTGCTCGTTTTTATCTGCTGCTCTGGTCATCCAAGTTCTGCGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:916081:916391:R YP_001933837.1|Treponema_pallidum_SS14_uid58977|htrA2 NC_010741.1 upstream YP_001933838.1 R 917160 917282 ATGTTTGACTGCACCCTGGCGGAGGAGTACCGTGGTCCTGGGGGACCTCCGAAGGGCTGGAGGTCCCCCTGCAGCTAGTGAACGGACAGAGGAGGGACGCTTGAGCAGGAAGGAAAGGACCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:917160:917282:R YP_001933838.1|Treponema_pallidum_SS14_uid58977|map NC_010741.1 upstream YP_001933839.1 R 918108 918199 TTGCCCAACCTCCTCTAAAAAGAGCACACATCCCGCGCAACGCTATCTGAAAAAAGATCGGCACGTCAATCCCTCTTTGCTGTAGGGCTCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:918108:918199:R YP_001933839.1|Treponema_pallidum_SS14_uid58977|TPASS_0843 NC_010741.1 upstream YP_001933840.1 D 918108 918199 GGGAGCCCTACAGCAAAGAGGGATTGACGTGCCGATCTTTTTTCAGATAGCGTTGCGCGGGATGTGTGCTCTTTTTAGAGGAGGTTGGGCAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:918108:918199:D YP_001933840.1|Treponema_pallidum_SS14_uid58977|gap NC_010741.1 upstream YP_001933841.1 R 919898 919897 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:919898:919897:R YP_001933841.1|Treponema_pallidum_SS14_uid58977|TPASS_0845 NC_010741.1 upstream YP_001933842.1 R 920205 920204 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:920205:920204:R YP_001933842.1|Treponema_pallidum_SS14_uid58977|TPASS_0846 NC_010741.1 upstream YP_001933843.1 R 920540 920539 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:920540:920539:R YP_001933843.1|Treponema_pallidum_SS14_uid58977|TPASS_0847 NC_010741.1 upstream YP_001933844.1 R 920902 920933 GTGGCAAGCGTGAGAGGACGGAGGAGCGTGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:920902:920933:R YP_001933844.1|Treponema_pallidum_SS14_uid58977|rplT NC_010741.1 upstream YP_001933845.1 R 921135 921186 TGGAGTGTCGGGTAACTGCAGTTCGTGTTGTTGGATAAAGGGGAGAAAGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:921135:921186:R YP_001933845.1|Treponema_pallidum_SS14_uid58977|rpmI NC_010741.1 upstream YP_001933846.1 R 921727 921888 TCTCCCTTTTGGATGCCCACTATAGGTGGTGAATTTTTACATGTAAATAAGGAATTGGGGTTGTGATGGGGATGGTGATTTCCTGCATGTTTACTTGACATGACATATTAGGAATGGCTAGATTGGGGCCCAGTCTTGTTTTTTAGCGTGCATTAGAAGTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:921727:921888:R YP_001933846.1|Treponema_pallidum_SS14_uid58977|infC NC_010741.1 upstream YP_001933847.1 D 921727 921888 CCACTTCTAATGCACGCTAAAAAACAAGACTGGGCCCCAATCTAGCCATTCCTAATATGTCATGTCAAGTAAACATGCAGGAAATCACCATCCCCATCACAACCCCAATTCCTTATTTACATGTAAAAATTCACCACCTATAGTGGGCATCCAAAAGGGAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:921727:921888:D YP_001933847.1|Treponema_pallidum_SS14_uid58977|TPASS_0851 NC_010741.1 upstream YP_001933848.1 R 925091 925240 ACTTCATGAGGGTGGGGTATAACCCCTATTTGTGGGGGTGTTTTTGGGAGAATACAGTTTACGCGGAGCGTGGTGAATGGTGACAGGATAAACGGAAAACGGTGGCGGGGTAGTGCGCGGTGCATTTCCTTACGCGGTGGAGGTTGTGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:925091:925240:R YP_001933848.1|Treponema_pallidum_SS14_uid58977|lgt NC_010741.1 upstream YP_001933849.1 R 926378 926431 TGCCGCTGTTGTGCAGGTTATTGCATGGTGTGTGGGTTGTGACAAGGAGACGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:926378:926431:R YP_001933849.1|Treponema_pallidum_SS14_uid58977|ylxH2 NC_010741.1 upstream YP_001933850.1 R 931034 931033 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:931034:931033:R YP_001933850.1|Treponema_pallidum_SS14_uid58977|TPASS_0854 NC_010741.1 upstream YP_001933851.1 R 934414 934568 CTGCCCATGATATGGTATCTGCGGCGTCCGCGCAAGCGCTCCCCCGCAGCCCCCTGATTGAGCGCTCGTCCCCTACAGTCTCACACTTTTTGCCGAGAATATCTTAACCGTGCTCTGTCAGCTCAATACTTTGTCTACAAGGAGACGCGCCTGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:934414:934568:R YP_001933851.1|Treponema_pallidum_SS14_uid58977|TPASS_0855 NC_010741.1 upstream YP_001933852.1 D 934414 934568 GGCAGGCGCGTCTCCTTGTAGACAAAGTATTGAGCTGACAGAGCACGGTTAAGATATTCTCGGCAAAAAGTGTGAGACTGTAGGGGACGAGCGCTCAATCAGGGGGCTGCGGGGGAGCGCTTGCGCGGACGCCGCAGATACCATATCATGGGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:934414:934568:D YP_001933852.1|Treponema_pallidum_SS14_uid58977|TPASS_0856 NC_010741.1 upstream YP_001933853.1 R 935870 935869 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:935870:935869:R YP_001933853.1|Treponema_pallidum_SS14_uid58977|TPASS_0857 NC_010741.1 upstream YP_001933854.1 D 935854 935853 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:935854:935853:D YP_001933854.1|Treponema_pallidum_SS14_uid58977|TPASS_0858 NC_010741.1 upstream YP_001933855.1 D 937081 937161 TTCATAATATGCCGGGGCGCCCGCCGGTGCCCTGCTGAAGAATGCGGAGCGGCAAGACGTGGAGGGGGTTTTGCCGCTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:937081:937161:D YP_001933855.1|Treponema_pallidum_SS14_uid58977|TPASS_0859 NC_010741.1 upstream YP_001933856.1 D 937861 937924 CAGCCAGTCAAAGAGCTCCAACGGGAAGGAGAACCACCACATAGTCCTGACCGCGGACGTAGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:937861:937924:D YP_001933856.1|Treponema_pallidum_SS14_uid58977|TPASS_0860 NC_010741.1 upstream YP_001933857.1 R 940630 940865 GCGATGTGCAGCAAGGCAACGGATGGGCATGGGATCGCCTGTGACCTGTGGGTTACCTTGCTCGTTCGTCGGGTCTCCCCTTGGGGGAGGTGGTGAGTCTCCCTGTTGGTGCGCTGGACCGTAGCCTGCGAGGCGGCTCGTGGCTTGGTTGAGTCAGAATGGTTCCTACGCGTGCGTGTGTTCTGTGGGTTTGAGTTTAACGTTCTCCCGTGTGCTTTTGCACTGAAAAGGCGTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:940630:940865:R YP_001933857.1|Treponema_pallidum_SS14_uid58977|glmS NC_010741.1 upstream YP_001933858.1 R 941661 941794 GGTGCGTACGATGCCTGAAAAGTGGGTGTGGCTCAAGGAAGGATCGGGGCATTAGCTATCTCCTTGACGTGTGAAGTACGGATGGGGTAGGCTGGTCGCCTCGGGGCGGCGCGGATGAGCGCGCAAAAGGAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:941661:941794:R YP_001933858.1|Treponema_pallidum_SS14_uid58977|fklB NC_010741.1 upstream YP_001933859.1 D 941661 941794 CGCTCCTTTTGCGCGCTCATCCGCGCCGCCCCGAGGCGACCAGCCTACCCCATCCGTACTTCACACGTCAAGGAGATAGCTAATGCCCCGATCCTTCCTTGAGCCACACCCACTTTTCAGGCATCGTACGCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:941661:941794:D YP_001933859.1|Treponema_pallidum_SS14_uid58977|nifS2 NC_010741.1 upstream YP_001933860.1 R 944778 944810 ACTCTGCTTTATCGGGAAAGACACCCTCGGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:944778:944810:R YP_001933860.1|Treponema_pallidum_SS14_uid58977|TPASS_0864 NC_010741.1 upstream YP_001933861.1 R 946254 946653 ACGGCAGGGGAGCTGTCTATGTGCGCCGATTAACGGGCGGTCATCAACGGTGGAAGATTGGATTCGATACCGGAATGCGCGTCTTTCTCCTGAGAATGTGCAGCGTTGGTGTATGTTGACAGATGATGCTGCGCGGGAGTTCCATCGTGCAGTAGGAAAGGAGCAGCTATCGGGGCGCGGAGGACATGCGGTATTAAAAATAGCGCGTACAATTGCAGATATAGAAGGTGTTGCGCGCTTACAGGTGGCGCACGTGCAAGAGGCCGTAGCCCTTCGTACGTGGAGTGCGCTTTTGCCCCATTCTCTGACGTAATCGGGGCACTGGTAGGGGCGCAGCGTATGGGAAAGGGAAGGGACTGTGCGCAAGGGTTGCACGGAGCGGATGCGGTGAGGTAGTCTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:946254:946653:R YP_001933861.1|Treponema_pallidum_SS14_uid58977|TPASS_0865 NC_010741.1 upstream YP_001933862.1 R 948432 948599 GCATTCCTCCGTGGAATCTCTGACATTCCTGCAAGACGTCCGTGCCCTGCAGGGGCCCGTGCACCGCACGAGAGCAGAAACGGGCCAGTCCTATTTTCGGAAAAACGGAAAAGGACTTGAGGTTTTTTTCGCCTTTTTTGTTACGTTCCTTGGTAGGTACGTCCGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:948432:948599:R YP_001933862.1|Treponema_pallidum_SS14_uid58977|TPASS_0867 NC_010741.1 upstream YP_001933863.1 D 948432 948599 ACCCGGACGTACCTACCAAGGAACGTAACAAAAAAGGCGAAAAAAACCTCAAGTCCTTTTCCGTTTTTCCGAAAATAGGACTGGCCCGTTTCTGCTCTCGTGCGGTGCACGGGCCCCTGCAGGGCACGGACGTCTTGCAGGAATGTCAGAGATTCCACGGAGGAATGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:948432:948599:D YP_001933863.1|Treponema_pallidum_SS14_uid58977|flaB1 NC_010741.1 upstream YP_001933864.1 D 949068 949467 CTAACATGGACCAGCGCATGCGCGTGTACATCGGCACTATGACTGCGGTGGCGCTGGGCGTACGAAACGGCGTGGATGAGTCAATCATGTCCATTGAGACTGCAGACTCGGCCAACAAGAGCATCGGCACCATCGATGCTGCTTTGAAGAGAATCAACAAGCAGCGTGCGGATCTCGGAGGCTACCAGAACCGTATGGAGTACACAGTTGTCGGTCTTGACATCGCTGCGGAGAACCTGCAGGCAGCTGAGTCTCGCATCAGGGACGCAAACATCGCAAAGCAAATGGTTGAATACACTAAGAATCAGGTGCTCACCCAGTCTGGCACTGCAATGCTTGCGCAGGCGAACACCAGCGCGCAGTCGATTCTCTCAATTCTCCGGTAAGCCGGCTACGCCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:949068:949467:D YP_001933864.1|Treponema_pallidum_SS14_uid58977|TPASS_0869 NC_010741.1 upstream YP_001933865.1 D 949705 949731 AGGTGGAAGGACTTCAGGGAGGGTCAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:949705:949731:D YP_001933865.1|Treponema_pallidum_SS14_uid58977|flaB3 NC_010741.1 upstream YP_001933866.1 R 950812 950886 AATGACTCCTCGAAAGCTGCGGAGAGTGGATCAAGACTCCAGCCGAGTTCCCTTCAAAAAAACCCCACGCGCGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:950812:950886:R YP_001933866.1|Treponema_pallidum_SS14_uid58977|TPASS_0871 NC_010741.1 upstream YP_001933867.1 D 950812 950886 GCCGCGCGTGGGGTTTTTTTGAAGGGAACTCGGCTGGAGTCTTGATCCACTCTCCGCAGCTTTCGAGGAGTCATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:950812:950886:D YP_001933867.1|Treponema_pallidum_SS14_uid58977|fliD NC_010741.1 upstream YP_001933868.1 D 953056 953066 TGGGAGTCTTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:953056:953066:D YP_001933868.1|Treponema_pallidum_SS14_uid58977|TPASS_0873 NC_010741.1 upstream YP_001933869.1 D 953666 953665 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:953666:953665:D YP_001933869.1|Treponema_pallidum_SS14_uid58977|TPASS_0874 NC_010741.1 upstream YP_001933870.1 D 953942 953980 ATCTTGTCCAGTTTTTTTAAAAACGGTAGACTCGCCGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:953942:953980:D YP_001933870.1|Treponema_pallidum_SS14_uid58977|TPASS_0875 NC_010741.1 upstream YP_001933871.1 D 954389 954434 CGCAGAGTGCTTCCTGTCTTGCAAAAAGGCAAAGAGGGCGGGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:954389:954434:D YP_001933871.1|Treponema_pallidum_SS14_uid58977|TPASS_0876 NC_010741.1 upstream YP_001933872.1 D 955101 955104 TACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:955101:955104:D YP_001933872.1|Treponema_pallidum_SS14_uid58977|TPASS_0877 NC_010741.1 upstream YP_001933873.1 R 957166 957170 GGGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:957166:957170:R YP_001933873.1|Treponema_pallidum_SS14_uid58977|TPASS_0878 NC_010741.1 upstream YP_001933874.1 R 958653 958652 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:958653:958652:R YP_001933874.1|Treponema_pallidum_SS14_uid58977|TPASS_0879 NC_010741.1 upstream YP_001933875.1 R 959375 959374 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:959375:959374:R YP_001933875.1|Treponema_pallidum_SS14_uid58977|TPASS_0880 NC_010741.1 upstream YP_001933876.1 R 960171 960248 GGATGTGTTTTCTATAAAAATCTGTGTATTAACTGCAGTGGTGTGTCTGCTGTCTTGAATTCTTTTTTGACGGTGAAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:960171:960248:R YP_001933876.1|Treponema_pallidum_SS14_uid58977|natA NC_010741.1 upstream YP_001933877.1 R 961752 961751 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:961752:961751:R YP_001933877.1|Treponema_pallidum_SS14_uid58977|TPASS_0882 NC_010741.1 upstream YP_001933878.1 R 962815 962831 AAATACTGCAGGTGTAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:962815:962831:R YP_001933878.1|Treponema_pallidum_SS14_uid58977|TPASS_0883 NC_010741.1 upstream YP_001933879.1 R 963921 963949 TTACCTAGATGTGGAGAAGAGTGCTTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:963921:963949:R YP_001933879.1|Treponema_pallidum_SS14_uid58977|TPASS_0884 NC_010741.1 upstream YP_001933880.1 R 964391 964390 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:964391:964390:R YP_001933880.1|Treponema_pallidum_SS14_uid58977|dut NC_010741.1 upstream YP_001933881.1 R 966496 966642 GGGCTTTGCATGGGGAAGTTTCGCAGTGCGTGCCGCCGAGGGGTTGTGCATAGGACGGTTGTCCGTTCTGCTTTCTTTGTCTAGCTTCGCAGGTGGCTGTGCCAGGGCTTGGTGCGGCCTGCGATACATTCTGTTCTTAGGAAACGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:966496:966642:R YP_001933881.1|Treponema_pallidum_SS14_uid58977|pnp NC_010741.1 upstream YP_001933882.1 R 966913 966927 GAAAGGAGAAGGAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:966913:966927:R YP_001933882.1|Treponema_pallidum_SS14_uid58977|rpsO NC_010741.1 upstream YP_001933883.1 R 967756 967758 GGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:967756:967758:R YP_001933883.1|Treponema_pallidum_SS14_uid58977|ribF NC_010741.1 upstream YP_001933884.1 R 968860 968859 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:968860:968859:R YP_001933884.1|Treponema_pallidum_SS14_uid58977|truB NC_010741.1 upstream YP_001933885.1 R 969218 969217 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:969218:969217:R YP_001933885.1|Treponema_pallidum_SS14_uid58977|rbfA NC_010741.1 upstream YP_001933886.1 R 971743 971917 GAGAGCTATGACCCTACGAGACAATACGCCTAAAGACACTTCCCGTGTTGCTAGTGAGCAGGCTGTGCGTTCACCGGTGACGTCTGGTCAAACTACCTCTCGTACACGGGCGGATGTTGACGTAAAGGAGAAAAGACTCGTAATAAAGAAGACAATCAAAGTGCGCGCAAAGAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:971743:971917:R YP_001933886.1|Treponema_pallidum_SS14_uid58977|infB NC_010741.1 upstream YP_001933887.1 R 973376 973424 AAGGGCTTTTGGTCTGCACCTTCGCCCAAAATCGCCTAAGGAGCCGCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:973376:973424:R YP_001933887.1|Treponema_pallidum_SS14_uid58977|nusA NC_010741.1 upstream YP_001933888.1 R 973896 974069 CAGACGGGCAGTCTGTAACGTGCACCGGCGTGGTGCGGAGGTGCCGCCCGAGTGCGTTAGCACCCTCACAGTAACCGAGGCCCGCGTAGTGTGTAGCGGGCGTATCCTCATTTTTGTGGGCCCTTGTGTGAGAGTTTTAAACATGCTAGAGTGAGCCCCGCGAGGGGTGCGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:973896:974069:R YP_001933888.1|Treponema_pallidum_SS14_uid58977|TPASS_0893 NC_010741.1 upstream YP_001933889.1 R 975093 975098 GACGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:975093:975098:R YP_001933889.1|Treponema_pallidum_SS14_uid58977|TPASS_0894 NC_010741.1 upstream YP_001933890.1 R 975606 975626 CACGCAGCGGAGGTAGGCGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:975606:975626:R YP_001933890.1|Treponema_pallidum_SS14_uid58977|TPASS_0895 NC_010741.1 upstream YP_001933891.1 R 975780 975779 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:975780:975779:R YP_001933891.1|Treponema_pallidum_SS14_uid58977|TPASS_0896 NC_010741.1 upstream YP_001933892.1 R 977279 977278 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:977279:977278:R YP_001933892.1|Treponema_pallidum_SS14_uid58977|tprK NC_010741.1 upstream YP_001933893.1 R 980995 980994 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:980995:980994:R YP_001933893.1|Treponema_pallidum_SS14_uid58977|TPASS_0898 NC_010741.1 upstream YP_001933894.1 R 981579 981578 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:981579:981578:R YP_001933894.1|Treponema_pallidum_SS14_uid58977|TPASS_0899 NC_010741.1 upstream YP_001933895.1 R 983951 983988 TACGTGTTACGTCCTTCGGGTAAGGCACGGAGCATGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:983951:983988:R YP_001933895.1|Treponema_pallidum_SS14_uid58977|TPASS_0900 NC_010741.1 upstream YP_001933896.1 R 985402 985441 TGTTACGTGATGTCTACCCAAAAGGGAGTGCGGTGCACGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:985402:985441:R YP_001933896.1|Treponema_pallidum_SS14_uid58977|TPASS_0901 NC_010741.1 upstream YP_001933897.1 R 986324 986324 G Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:986324:986324:R YP_001933897.1|Treponema_pallidum_SS14_uid58977|est NC_010741.1 upstream YP_001933898.1 D 986324 986324 C Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:986324:986324:D YP_001933898.1|Treponema_pallidum_SS14_uid58977|murD NC_010741.1 upstream YP_001933899.1 D 987916 987915 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:987916:987915:D YP_001933899.1|Treponema_pallidum_SS14_uid58977|TPASS_0904 NC_010741.1 upstream YP_001933900.1 D 988130 988129 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:988130:988129:D YP_001933900.1|Treponema_pallidum_SS14_uid58977|rpsP NC_010741.1 upstream YP_001933901.1 D 988502 988509 GCAAGGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:988502:988509:D YP_001933901.1|Treponema_pallidum_SS14_uid58977|TPASS_0906 NC_010741.1 upstream YP_001933902.1 D 988753 988814 CGGCTCCTTTTCCGTCTTGCGGCCTTGTTGCAGGCGGTGTGTGGTGGGTTATGGATAGAATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:988753:988814:D YP_001933902.1|Treponema_pallidum_SS14_uid58977|TPASS_0907 NC_010741.1 upstream YP_001933903.1 D 989336 989335 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:989336:989335:D YP_001933903.1|Treponema_pallidum_SS14_uid58977|trmD NC_010741.1 upstream YP_001933904.1 D 990060 990059 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:990060:990059:D YP_001933904.1|Treponema_pallidum_SS14_uid58977|rplS NC_010741.1 upstream YP_001933905.1 D 990428 990427 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:990428:990427:D YP_001933905.1|Treponema_pallidum_SS14_uid58977|TPASS_0910 NC_010741.1 upstream YP_001933906.1 D 991349 991369 CAGACGCACACTACCGCCACC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:991349:991369:D YP_001933906.1|Treponema_pallidum_SS14_uid58977|TPASS_0911 NC_010741.1 upstream YP_001933907.1 D 991622 991633 CGTTACCGCTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:991622:991633:D YP_001933907.1|Treponema_pallidum_SS14_uid58977|TPASS_0912 NC_010741.1 upstream YP_001933908.1 D 992940 992939 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:992940:992939:D YP_001933908.1|Treponema_pallidum_SS14_uid58977|TPASS_0913 NC_010741.1 upstream YP_001933909.1 D 993321 993491 AAGGTTCCGTTTTTCCTTCTCGAGGAAGACGAAGTTCCCGCAGGGTGTTTTGCTCTGAAACAATTCACGAACTGGAAAAGAAGATTCAAGATCAGTCCTATATTGAGGGGGCTATTCAAAGGCTCGCGCTCATTCTCAGTAAGCGGTTATTGTCAATGAGAGGAATAGAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:993321:993491:D YP_001933909.1|Treponema_pallidum_SS14_uid58977|TPASS_0914 NC_010741.1 upstream YP_001933910.1 D 993879 993951 GTTCTGTTTCCAGCCTACCGGCACATTGCAGAGTCTATTGACAGCTGAATGATTTGTTAGCACACTGCGCCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:993879:993951:D YP_001933910.1|Treponema_pallidum_SS14_uid58977|TPASS_0915 NC_010741.1 upstream YP_001933911.1 D 995287 995342 TCTGCCTGAACGAACGCGTCTCTCGCTCCCTCTCTGCTTTTGTGCGTTTTGCCTAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:995287:995342:D YP_001933911.1|Treponema_pallidum_SS14_uid58977|TPASS_0916 NC_010741.1 upstream YP_001933912.1 D 995455 995454 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:995455:995454:D YP_001933912.1|Treponema_pallidum_SS14_uid58977|mgtE NC_010741.1 upstream YP_001933913.1 D 996805 996818 AAAGACGGAAGCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:996805:996818:D YP_001933913.1|Treponema_pallidum_SS14_uid58977|TPASS_0918 NC_010741.1 upstream YP_001933914.1 R 997936 998157 ACTCTACGCTAATTTTCCCCAAAGTAAAAGGGGAAGGGTGAGTCACAAGACAGCACACAGGTGATCACAGGGAGTGCGCGTCTCCGGTTAGGGAAATAAGAAATGTGGTATGCTCCGCCTGTACGTTTGGACTATGGTGCAGAGGATAGGAAAAGATGCAACTGTACACTCCTGCGCCTATCTGGTACCCTCTGGCATAGTTTTTACCTAAGGAGCATTTCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:997936:998157:R YP_001933914.1|Treponema_pallidum_SS14_uid58977|trx NC_010741.1 upstream YP_001933915.1 D 997936 998157 TGAAATGCTCCTTAGGTAAAAACTATGCCAGAGGGTACCAGATAGGCGCAGGAGTGTACAGTTGCATCTTTTCCTATCCTCTGCACCATAGTCCAAACGTACAGGCGGAGCATACCACATTTCTTATTTCCCTAACCGGAGACGCGCACTCCCTGTGATCACCTGTGTGCTGTCTTGTGACTCACCCTTCCCCTTTTACTTTGGGGAAAATTAGCGTAGAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:997936:998157:D YP_001933915.1|Treponema_pallidum_SS14_uid58977|TPASS_0920 NC_010741.1 upstream YP_001933916.1 D 1000588 1000694 CATTCTCCCAGTTATCGCGTTTGGGAACAAAACAACCGCGGCTGTTTTCAGGCGCCTGTACAAAAATCTTTTCCCTGAACTACAATGCCAAACGTAAGGAGGACGCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1000588:1000694:D YP_001933916.1|Treponema_pallidum_SS14_uid58977|TPASS_0921 NC_010741.1 upstream YP_001933917.1 R 1003060 1003097 CGGGGCAGGGTACCAGCCTGCTGCGATCGCGCGGGCAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1003060:1003097:R YP_001933917.1|Treponema_pallidum_SS14_uid58977|TPASS_0922 NC_010741.1 upstream YP_001933918.1 R 1004118 1004268 AGGACTGCTGGCTCCAGCTATACACCAAATATGCGCGTCCTGCAAGGGTGTTTCCTGCGGGTGTGATGCCCCTCGTGCACCCTGTTCCCTGGCGCACTGCGGCGCGGTGTAGCGCTCTAGGCGCGTCGGGGGGTGTTGTAGAATAGGCCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1004118:1004268:R YP_001933918.1|Treponema_pallidum_SS14_uid58977|TPASS_0923 NC_010741.1 upstream YP_001933919.1 D 1004342 1004440 CTCGCCCTTCTCTGGCCGGTGCCACGCCAGGGTCCGCGCCGGAGCCGGTTGCAGGCCGGCGCTTCTCTAAAAAGAGCCAAACGCGTTACACTCCCCCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1004342:1004440:D YP_001933919.1|Treponema_pallidum_SS14_uid58977|tex NC_010741.1 upstream YP_001933920.1 D 1006952 1007143 GCGCAGGCCCCAGTGTACCGGAAAATGTCGGCCCGTCAAGTCTACCGGTGTCCAGGGTGGCACCGGATCCTGCTGTGGCTGCGGTTGACAGCAACAGAGCTTTCCCCTACCCTTGCGCGGGCAGGGTGCGCGTGTCGTGGCTGCACTATTTTGCGAGTGCACCCACTGCGTGACGTTCCCGAGGAGGAGTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1006952:1007143:D YP_001933920.1|Treponema_pallidum_SS14_uid58977|TPASS_0925 NC_010741.1 upstream YP_001933921.1 R 1009274 1009364 CCTTTGTGCTGATGGCGTGCTTTGTCCTCTCCCGCGCGTATGCGCTACGGTGGCGATGCCGTGGTTAGATTCCCTTTTGGGGATGAGTTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1009274:1009364:R YP_001933921.1|Treponema_pallidum_SS14_uid58977|TPASS_0926 NC_010741.1 upstream YP_001933922.1 D 1009274 1009364 CCAACTCATCCCCAAAAGGGAATCTAACCACGGCATCGCCACCGTAGCGCATACGCGCGGGAGAGGACAAAGCACGCCATCAGCACAAAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1009274:1009364:D YP_001933922.1|Treponema_pallidum_SS14_uid58977|TPASS_0927 NC_010741.1 upstream YP_001933923.1 D 1009956 1010049 TCCTCGTGTGATACGGATTACTGGATCTGAGCCGAGGCACTCGCTGCGCGGGTGTTGACAGGGGCAGTTCCGCTGTGCCACAGTTGCGCAGTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1009956:1010049:D YP_001933923.1|Treponema_pallidum_SS14_uid58977|TPASS_0928 NC_010741.1 upstream YP_001933924.1 D 1010791 1010801 AGAAACGGGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1010791:1010801:D YP_001933924.1|Treponema_pallidum_SS14_uid58977|TPASS_0929 NC_010741.1 upstream YP_001933925.1 D 1011573 1011595 CCCTGTGCGTGGCGCGGCTGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1011573:1011595:D YP_001933925.1|Treponema_pallidum_SS14_uid58977|TPASS_0930 NC_010741.1 upstream YP_001933926.1 R 1014832 1014840 GGAGATGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1014832:1014840:R YP_001933926.1|Treponema_pallidum_SS14_uid58977|TPASS_0931 NC_010741.1 upstream YP_001933927.1 R 1014934 1014942 TTCGTCTGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1014934:1014942:R YP_001933927.1|Treponema_pallidum_SS14_uid58977|TPASS_0932 NC_010741.1 upstream YP_001933928.1 R 1016566 1016700 GCGGCGGAGTGTAAGTTAATCACTAAAAGGCTGTCAACGAGATGGCCTTTCCCCACCGTTTGCGATCTTCTTTGAAAAAGCATTGACAATAGATTGTTCCCCGAGGGCGTGCAATCAGATACAATCAGACCCGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1016566:1016700:R YP_001933928.1|Treponema_pallidum_SS14_uid58977|murE NC_010741.1 upstream YP_001933929.1 D 1016566 1016700 CGCGGGTCTGATTGTATCTGATTGCACGCCCTCGGGGAACAATCTATTGTCAATGCTTTTTCAAAGAAGATCGCAAACGGTGGGGAAAGGCCATCTCGTTGACAGCCTTTTAGTGATTAACTTACACTCCGCCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1016566:1016700:D YP_001933929.1|Treponema_pallidum_SS14_uid58977|TPASS_0934 NC_010741.1 upstream YP_001933930.1 R 1018856 1018965 TAACGAAACCGGGGCCGAGCGTAACGGGAATGCGCCGGACGTGTCAAGCGCTCTTATGGGCGTGAAGCGGTTGCCTGACAGAACCAGTTTCTTTGTGTTACGATAAACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1018856:1018965:R YP_001933930.1|Treponema_pallidum_SS14_uid58977|TPASS_0935 NC_010741.1 upstream YP_001933931.1 R 1020123 1020293 ACTGTAGGTAGTTCTTGAAAATAACGAAGAGTTGGTTGCATATGTCTTACCCGGCAGTGCGTTGCATGCGAGGTTCACACGGGTATCCAAAACGCGTGGTCGGCTGCTTTGTGCTCGCTGCACTCTCCTTTTGAAAGGCAGCGCGCCTTTTAAAATAGCGTTTGGTGCGAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1020123:1020293:R YP_001933931.1|Treponema_pallidum_SS14_uid58977|TPASS_0936 NC_010741.1 upstream YP_001933932.1 R 1020930 1020929 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1020930:1020929:R YP_001933932.1|Treponema_pallidum_SS14_uid58977|TPASS_0937 NC_010741.1 upstream YP_001933933.1 R 1021757 1021820 GGACCGGGCGCGCACGGTGTCTTTCGTGGGCGAGGAGAGCGCTCAGCGTCTCCCCGTGTGCTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1021757:1021820:R YP_001933933.1|Treponema_pallidum_SS14_uid58977|TPASS_0938 NC_010741.1 upstream YP_001933934.1 R 1025376 1025390 AGAGAGGACGGTCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1025376:1025390:R YP_001933934.1|Treponema_pallidum_SS14_uid58977|TPASS_0939 NC_010741.1 upstream YP_001933935.1 R 1025532 1025569 GCGCGTGTTCTTTTTTTCTGAACAGGGAGAAGTGATGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1025532:1025569:R YP_001933935.1|Treponema_pallidum_SS14_uid58977|TPASS_0940 NC_010741.1 upstream YP_001933936.1 R 1026089 1026164 GCGCTTTTGCCAGACCATCTCAGGGGAGGAGGTGCGGCAAGCTGGATTTTTCCAGTCGGTTGTGTGACAATGCGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1026089:1026164:R YP_001933936.1|Treponema_pallidum_SS14_uid58977|TPASS_0941 NC_010741.1 upstream YP_001933937.1 R 1026630 1026634 GGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1026630:1026634:R YP_001933937.1|Treponema_pallidum_SS14_uid58977|TPASS_0942 NC_010741.1 upstream YP_001933938.1 R 1027082 1027129 TGTTGTGGTCGATATTGGCGCTATTGTTTTGCTACGATGGAGGCTGCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1027082:1027129:R YP_001933938.1|Treponema_pallidum_SS14_uid58977|fliS NC_010741.1 upstream YP_001933939.1 R 1028303 1028472 GGTGTTCAGGTGTAAGGAGACCCTGTCGCTCATAGGGTACTAGAGCGCTTGTTTTTCTGCGGGGATACTGCTTCTTGCTATGCATAGGGGTTAGTTTTTGCTGCGTGGTGCTTGCACGCGACAGTGGTTGTTCGTGCAAGTTATGGTAATGTTTGTAAAGCAGAGCACTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1028303:1028472:R YP_001933939.1|Treponema_pallidum_SS14_uid58977|TPASS_0944 NC_010741.1 upstream YP_001933940.1 R 1029130 1029280 GACGGGGTCAGCCTACCCGCGGGAAGGATATTTTTCTATCGGTTTAGGCGCAAATAAAACAGGATAAGCAGGACACTGTCTTGAATGTTTGGGGTTGTTCACGCCAGTATCCATATTTACAGGTGCTCGATTTGTTTGCTAGCATGGACCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1029130:1029280:R YP_001933940.1|Treponema_pallidum_SS14_uid58977|cfxE NC_010741.1 upstream YP_001933941.1 D 1029130 1029280 AGGTCCATGCTAGCAAACAAATCGAGCACCTGTAAATATGGATACTGGCGTGAACAACCCCAAACATTCAAGACAGTGTCCTGCTTATCCTGTTTTATTTGCGCCTAAACCGATAGAAAAATATCCTTCCCGCGGGTAGGCTGACCCCGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1029130:1029280:D YP_001933941.1|Treponema_pallidum_SS14_uid58977|gidB NC_010741.1 upstream YP_001933942.1 R 1030642 1030641 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1030642:1030641:R YP_001933942.1|Treponema_pallidum_SS14_uid58977|cyp NC_010741.1 upstream YP_001933943.1 R 1031334 1031348 TGCAGGAGTCGGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1031334:1031348:R YP_001933943.1|Treponema_pallidum_SS14_uid58977|jag NC_010741.1 upstream YP_001933944.1 R 1033347 1033621 TTTGGTCCTCTTGGTTTCCGTTGTGGAAGACAGCTTGCGGCGTATCAGCGGCTGCTGTGCGTGTTGTGTGATCGCGCGCGTCTGTTCTCTGAATTTACCGCTGAAAGGCAGGAATAGGCCGTGAGTGTGCGTCGCTTGTGTGCATGGGTATTTAGTGGATTGTTGCTCGCGCTGATCCGTTTTTACCAGCGCGCTCTTTCCCCTCATCTTTTGCCTTCGTGCCGTTATTATCCGAGTTGCTCGCAGTATGCCTATGAGAGCGTGCGAGTACATGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1033347:1033621:R YP_001933944.1|Treponema_pallidum_SS14_uid58977|TPASS_0949 NC_010741.1 upstream YP_001933945.1 R 1033907 1033909 GCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1033907:1033909:R YP_001933945.1|Treponema_pallidum_SS14_uid58977|TPASS_0950 NC_010741.1 upstream YP_001933946.1 R 1034066 1034184 AGGTGCTGACGCGGCTCCTCCCGAGGAGCCGGTTCCCCCTACAAGAGGGGATCTTGACGCCTCCGGTACCTTTGGTACAGAGTGGACCCTCGTGTTCTTAGCAGGGGGAGGAGAAATCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1034066:1034184:R YP_001933946.1|Treponema_pallidum_SS14_uid58977|rpmH NC_010741.1 upstream YP_001933947.1 R 1035223 1035303 GTGACGGTAAGGACGTGCTGCAGCACGTGTAAAGTGATGGAGCAGTCACGGGCAAACGGAGCGGGCGTGTAAGCGGCGGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1035223:1035303:R YP_001933947.1|Treponema_pallidum_SS14_uid58977|TPASS_0952 NC_010741.1 upstream YP_001933948.1 R 1036495 1036580 GCCGTCTTGGGCGCCACCGTGTGTGGGAGGGACAGTCGGCAAGGTGCGACTGGTTGATGGCGTGAGTCTCGGGTAAAGGTTACCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1036495:1036580:R YP_001933948.1|Treponema_pallidum_SS14_uid58977|traB NC_010741.1 upstream YP_001933949.1 R 1038018 1038088 AAAGGTAAAAGAAAGACGCCGAGAATTCAGCGACGCGCGGGTGTCGGCAGCGTGCGGTACAGGGGGTCGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1038018:1038088:R YP_001933949.1|Treponema_pallidum_SS14_uid58977|TPASS_0954 NC_010741.1 upstream YP_001933950.1 R 1038362 1038456 TTCTTTTCCATGCTCAGGGGCGAGGCAGTGCTCAGCTGGCGTCTCCACTCGCACAGAAACTGCTCGTACGCGGCTATGGTAGCGTCCAGACCGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1038362:1038456:R YP_001933950.1|Treponema_pallidum_SS14_uid58977|TPASS_0955 NC_010741.1 upstream YP_001933951.1 D 1038362 1038456 ATCGGTCTGGACGCTACCATAGCCGCGTACGAGCAGTTTCTGTGCGAGTGGAGACGCCAGCTGAGCACTGCCTCGCCCCTGAGCATGGAAAAGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1038362:1038456:D YP_001933951.1|Treponema_pallidum_SS14_uid58977|TPASS_0956 NC_010741.1 upstream YP_001933952.1 D 1039429 1039518 GAATAAGCAGAATTCGTGGTGCAGGTAGTCTCCCTGCACAGGACGCGCGTTCTTGTGTAAAAAATTACTTTTTGCAAAAGGAATATCTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1039429:1039518:D YP_001933952.1|Treponema_pallidum_SS14_uid58977|tp33 NC_010741.1 upstream YP_001933953.1 D 1040548 1040578 GCTTAGCCGGTATAAGAGGGAAGGCGATGTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1040548:1040578:D YP_001933953.1|Treponema_pallidum_SS14_uid58977|dctM NC_010741.1 upstream YP_001933954.1 R 1042936 1042946 GAGACTGAAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1042936:1042946:R YP_001933954.1|Treponema_pallidum_SS14_uid58977|TPASS_0959 NC_010741.1 upstream YP_001933955.1 R 1043742 1043816 TTGTCCGCATGTTTTATAGAATGTAAAGAAGATATAGACGAGCATAGCGTGTAGCGGAGTGAGAGGGAGGTGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1043742:1043816:R YP_001933955.1|Treponema_pallidum_SS14_uid58977|flgG NC_010741.1 upstream YP_001933956.1 R 1044633 1044717 ATATCAAAAAAGTAGTCACACTGACAAAAGAATTTTCTTGATTCCCCTTTTCTATCTCCCGATACCAGGGGGAGCGGAGGGGCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1044633:1044717:R YP_001933956.1|Treponema_pallidum_SS14_uid58977|flgG2 NC_010741.1 upstream YP_001933957.1 R 1045951 1046060 GCGATGTGTGTGCGCGTGCCTGTCCTGTGGCGTTGCCATGTGCGTGAAGTCAGGTTTCTGTAGGAGGGGAGAGGCGCGCGCGTAGAGCGCACGGCTCTGCAAAGAGGGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1045951:1046060:R YP_001933957.1|Treponema_pallidum_SS14_uid58977|TPASS_0962 NC_010741.1 upstream YP_001933958.1 R 1047291 1047290 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1047291:1047290:R YP_001933958.1|Treponema_pallidum_SS14_uid58977|TPASS_0963 NC_010741.1 upstream YP_001933959.1 R 1047988 1047987 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1047988:1047987:R YP_001933959.1|Treponema_pallidum_SS14_uid58977|TPASS_0964 NC_010741.1 upstream YP_001933960.1 R 1048950 1048973 AGAATACCCCAAGAAGGAAGTTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1048950:1048973:R YP_001933960.1|Treponema_pallidum_SS14_uid58977|TPASS_0965 NC_010741.1 upstream YP_001933961.1 R 1050609 1050654 ACATGGGGAGTCTGGTATCTTATGCTGCAATCCAACGGGGGGTAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1050609:1050654:R YP_001933961.1|Treponema_pallidum_SS14_uid58977|TPASS_0966 NC_010741.1 upstream YP_001933962.1 R 1052209 1052208 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1052209:1052208:R YP_001933962.1|Treponema_pallidum_SS14_uid58977|TPASS_0967 NC_010741.1 upstream YP_001933963.1 R 1053828 1053827 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1053828:1053827:R YP_001933963.1|Treponema_pallidum_SS14_uid58977|TPASS_0968 NC_010741.1 upstream YP_001933964.1 R 1055444 1055443 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1055444:1055443:R YP_001933964.1|Treponema_pallidum_SS14_uid58977|TPASS_0969 NC_010741.1 upstream YP_001933965.1 R 1055557 1055577 GGACGTTCAGAAGGTCCGAGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1055557:1055577:R YP_001933965.1|Treponema_pallidum_SS14_uid58977|TPASS_0970 NC_010741.1 upstream YP_001933966.1 R 1056193 1056347 GCTTGGGACGGCTGTGTCGCGTCCTACTGGGGCCGGGTGTGTGCTGCGCCGTGGAGATTTCCATTTGTTTTTCTATAATGGTGAGGAAAAGAAGCGCTGGACGGGAGAAGGCGTTTTGAAAAGGAGGGGCGCGTGACGCCCCAGGGGAGTGAAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1056193:1056347:R YP_001933966.1|Treponema_pallidum_SS14_uid58977|tpd NC_010741.1 upstream YP_001933967.1 R 1057695 1057781 AACGTATTTTCGCGCCGTTTAGATGTAGGCTGTTTCTCAATTTTTCGTTCTGCATCAGGGTACATCTGCCGTAGTGTGGAGAAATAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1057695:1057781:R YP_001933967.1|Treponema_pallidum_SS14_uid58977|TPASS_0972 NC_010741.1 upstream YP_001933968.1 D 1057695 1057781 CTATTTCTCCACACTACGGCAGATGTACCCTGATGCAGAACGAAAAATTGAGAAACAGCCTACATCTAAACGGCGCGAAAATACGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1057695:1057781:D YP_001933968.1|Treponema_pallidum_SS14_uid58977|pheS NC_010741.1 upstream YP_001933969.1 R 1059777 1059827 ATCTTTATTTTTCTTACAAATTTCCGATAATGGGGCGGGGGTGGGGCTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1059777:1059827:R YP_001933969.1|Treponema_pallidum_SS14_uid58977|TPASS_0974 NC_010741.1 upstream YP_001933970.1 R 1060653 1060699 CTGTTTCCTTGTTGCGCAAGGGAACAGGTGGTGCGTAGGTTTGCGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1060653:1060699:R YP_001933970.1|Treponema_pallidum_SS14_uid58977|TPASS_0975 NC_010741.1 upstream YP_001933971.1 D 1060653 1060699 CGCGCAAACCTACGCACCACCTGTTCCCTTGCGCAACAAGGAAACAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1060653:1060699:D YP_001933971.1|Treponema_pallidum_SS14_uid58977|TPASS_0976 NC_010741.1 upstream YP_001933972.1 D 1062066 1062065 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1062066:1062065:D YP_001933972.1|Treponema_pallidum_SS14_uid58977|TPASS_0977 NC_010741.1 upstream YP_001933973.1 D 1062923 1062922 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1062923:1062922:D YP_001933973.1|Treponema_pallidum_SS14_uid58977|lspA NC_010741.1 upstream YP_001933974.1 D 1063517 1063685 AGCTGGGCCGTGCGCGCATGTCCGCGTCGGCCGTTCTAGTTCGCGTGCCCCTGTGCCCGCAATGGTTGCTTTGTTCTCCGCAAATACCGCGCGTGTGTGCCGCGCGTTGCGCTTCCGGCGTACCAGGGCGGTACGCGCGAGCGCCTCACAGCACTCAGGATATTAGCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1063517:1063685:D YP_001933974.1|Treponema_pallidum_SS14_uid58977|TPASS_0979 NC_010741.1 upstream YP_001933975.1 D 1064460 1064466 GCAGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1064460:1064466:D YP_001933975.1|Treponema_pallidum_SS14_uid58977|ntrB NC_010741.1 upstream YP_001933976.1 D 1065490 1065548 GTTGCACGGCTTTTCAAACCGCGTGAAAAACGTACGCTTCCGGCGTACCCCAACTTACT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1065490:1065548:D YP_001933976.1|Treponema_pallidum_SS14_uid58977|TPASS_0981 NC_010741.1 upstream YP_001933977.1 D 1066713 1066727 ACCGATACTGGCGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1066713:1066727:D YP_001933977.1|Treponema_pallidum_SS14_uid58977|TPASS_0982 NC_010741.1 upstream YP_001933978.1 D 1067344 1067343 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1067344:1067343:D YP_001933978.1|Treponema_pallidum_SS14_uid58977|TPASS_0983 NC_010741.1 upstream YP_001933979.1 R 1070004 1070146 TCACGGGTTCTTTTGTCTGGTGTTCATCGGGCAGCGTGTACCACCTGTTCCGGTTGGTTTACTGTGCTGCATAGTCTGTGCTACACTTCGCGCGCGGTCTGTGCGCGGCGTAATGGAATCTTTTTTAACCTCTGGGAGGATAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1070004:1070146:R YP_001933979.1|Treponema_pallidum_SS14_uid58977|htpG NC_010741.1 upstream YP_001933980.1 D 1070004 1070146 GTATCCTCCCAGAGGTTAAAAAAGATTCCATTACGCCGCGCACAGACCGCGCGCGAAGTGTAGCACAGACTATGCAGCACAGTAAACCAACCGGAACAGGTGGTACACGCTGCCCGATGAACACCAGACAAAAGAACCCGTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1070004:1070146:D YP_001933980.1|Treponema_pallidum_SS14_uid58977|aspS NC_010741.1 upstream YP_001933981.1 D 1071956 1072010 GGGCATCGCTACTCGCTCGTCGGCGTAAAATACCTACCAGGGGGGGGAGGGGTAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1071956:1072010:D YP_001933981.1|Treponema_pallidum_SS14_uid58977|TPASS_0986 NC_010741.1 upstream YP_001933982.1 R 1073112 1073177 GAAACGTACCGTACCGACATTAACGGACGCATTACGGTACCGCTTGGTGGTCGTCGTGTTATAGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1073112:1073177:R YP_001933982.1|Treponema_pallidum_SS14_uid58977|TPASS_0987 NC_010741.1 upstream YP_001933983.1 D 1073112 1073177 ACCTATAACACGACGACCACCAAGCGGTACCGTAATGCGTCCGTTAATGTCGGTACGGTACGTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1073112:1073177:D YP_001933983.1|Treponema_pallidum_SS14_uid58977|TPASS_0988 NC_010741.1 upstream YP_001933984.1 R 1074923 1074968 TGCGCGTTATACTCCCCGCCCTCGTATCGGTTTTTTTTGTGGAGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1074923:1074968:R YP_001933984.1|Treponema_pallidum_SS14_uid58977|TPASS_0989 NC_010741.1 upstream YP_001933985.1 D 1074923 1074968 TCCTCCACAAAAAAAACCGATACGAGGGCGGGGAGTATAACGCGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1074923:1074968:D YP_001933985.1|Treponema_pallidum_SS14_uid58977|TPASS_0990 NC_010741.1 upstream YP_001933986.1 D 1078071 1078133 CCAACGGTGCCCGCTTGCCTGCATGACCGAAACAGGGTAGTCTCCCCTGAGAGGAGGCGACTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1078071:1078133:D YP_001933986.1|Treponema_pallidum_SS14_uid58977|TPASS_0991 NC_010741.1 upstream YP_001933987.1 D 1078293 1078324 CTCTTCTGCCTAGAGGAAAGGGGAACGATCCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1078293:1078324:D YP_001933987.1|Treponema_pallidum_SS14_uid58977|TPASS_0992 NC_010741.1 upstream YP_001933988.1 R 1079706 1079822 ACCCACTGCGCCCCTACCTTAAAAGATTTCAACCTTTTTGTCCATATTCCGATAAGCGTCGGGGGTGTCTTGTGAAGCATCGTTTTGCTCGGGTGAAGCCTTTGGAAGGAGTGTTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1079706:1079822:R YP_001933988.1|Treponema_pallidum_SS14_uid58977|TPASS_0993 NC_010741.1 upstream YP_001933989.1 D 1079909 1080060 GTTGTGCGGCCGTGCTGCCACTGTAGCGGGTAAGTAGCCGGGAGGTCAACATATACAGTGATTCGCACTGCCACCTTGCGCTGCTTGTAAAGCAAAGTGAGGATCCTCAATCCCTCTTCAGACAGCTGGACCTTGCACGCTTCCCGTTTCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1079909:1080060:D YP_001933989.1|Treponema_pallidum_SS14_uid58977|TPASS_0994 NC_010741.1 upstream YP_001933990.1 D 1080871 1080945 TGCGTAGCCAGATCTCATTCTCGAATGATAAGTCAACCGATGATTACCGTGGCTCGATTTCTATAACAAAGGATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1080871:1080945:D YP_001933990.1|Treponema_pallidum_SS14_uid58977|TPASS_0995 NC_010741.1 upstream YP_001933991.1 R 1083932 1083954 TCGCCGTGTGTGAGGGAGGGGGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1083932:1083954:R YP_001933991.1|Treponema_pallidum_SS14_uid58977|TPASS_0996 NC_010741.1 upstream YP_001933992.1 R 1085885 1085917 ACGAGGCATAACACACATGAGGTGGAGGTTACA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1085885:1085917:R YP_001933992.1|Treponema_pallidum_SS14_uid58977|sppA NC_010741.1 upstream YP_001933993.1 R 1087421 1087491 GCATTGTCCTGAACAGTTAATCTGTTAGCTTGCACGCCCTGCAGGCTACCGACCCCGACAGAAGGAGCCGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1087421:1087491:R YP_001933993.1|Treponema_pallidum_SS14_uid58977|TPASS_0998 NC_010741.1 upstream YP_001933994.1 D 1087421 1087491 TCGGCTCCTTCTGTCGGGGTCGGTAGCCTGCAGGGCGTGCAAGCTAACAGATTAACTGTTCAGGACAATGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1087421:1087491:D YP_001933994.1|Treponema_pallidum_SS14_uid58977|TPASS_0999 NC_010741.1 upstream YP_001933995.1 D 1089892 1090068 TTGTTGCACATCTGCGTGTAAGAAAACGACGAACGATTGTTCAACGGACTTTTTGAAACTGCGCAATTGGGGTATGTGTCCACGGGTAAAAAAGGTGAGGCACGATGCACCGGAGGCTGCCGGAAGGGTAGTCAGTGACTGCGCGATGCGCGCCTTCTTCTCAGGAAGGGCGGCAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1089892:1090068:D YP_001933995.1|Treponema_pallidum_SS14_uid58977|TPASS_1000 NC_010741.1 upstream YP_001933996.1 R 1092062 1092074 CGGTTATGGGTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1092062:1092074:R YP_001933996.1|Treponema_pallidum_SS14_uid58977|TPASS_1001 NC_010741.1 upstream YP_001933997.1 R 1092744 1092937 CGGGCCATTGTAGGCGGTGCATGCGTGTTATGTAAAGTTGTGCTGCGATCAGGAGTCTTCTTAAGGAGATTGGCGAAAGGTGCCGAAGCTGCGGGCGCGGAGGACGTATGGGTAGAACAGGATGTGTGGGTAATCGATGCAAACGGATAGGTACTGTGCGTGCGCGTGGCGAGAAGCAAAGGAGAATAGCATGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1092744:1092937:R YP_001933997.1|Treponema_pallidum_SS14_uid58977|TPASS_1002 NC_010741.1 upstream YP_001933998.1 D 1092744 1092937 CCATGCTATTCTCCTTTGCTTCTCGCCACGCGCACGCACAGTACCTATCCGTTTGCATCGATTACCCACACATCCTGTTCTACCCATACGTCCTCCGCGCCCGCAGCTTCGGCACCTTTCGCCAATCTCCTTAAGAAGACTCCTGATCGCAGCACAACTTTACATAACACGCATGCACCGCCTACAATGGCCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1092744:1092937:D YP_001933998.1|Treponema_pallidum_SS14_uid58977|TPASS_1003 NC_010741.1 upstream YP_001933999.1 R 1094604 1094676 GTAGCGACAGACGGGTAGGAAGAGTGCGAAAGCTGTCAGTTCAATATGGGGATTTTGTACCAGGGGATGTGTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1094604:1094676:R YP_001933999.1|Treponema_pallidum_SS14_uid58977|recR NC_010741.1 upstream YP_001934000.1 R 1096396 1096453 ATGTTTTGTGCATTTGTATTTCCATGTGAGTGGTGCCGTCTGACAGGGGGAAGGATCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1096396:1096453:R YP_001934000.1|Treponema_pallidum_SS14_uid58977|dnaZX NC_010741.1 upstream YP_001934001.1 R 1098368 1098475 AAGTCTATAGTGCGCTCGTCTGTGTGAGCAGCAAGAGTATTGCCTTTCTGTGTCTTAAAAAGGTGAATGTGGTCATAGGTATGCTGATGAAAAGGAGAGCGGTCAGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1098368:1098475:R YP_001934001.1|Treponema_pallidum_SS14_uid58977|gyrB NC_010741.1 upstream YP_001934002.1 R 1099394 1099435 GAGCGTGCTTGCATAACACTGTCCACTGTGTAGGCTTTCTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1099394:1099435:R YP_001934002.1|Treponema_pallidum_SS14_uid58977|thyX NC_010741.1 upstream YP_001934003.1 R 1101974 1102099 CACGGGGGTGTTTTCTTCCGCGCGTCTCTGTGGGGGAAGCGTAAAGAACGAGTCTAGGAGTGGAAGCGAGAACTCTTACCCAAATGTTATTTTTGGCCCATAATCCGCGTTCGGACGGAGAGATAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1101974:1102099:R YP_001934003.1|Treponema_pallidum_SS14_uid58977|nrdA NC_010741.1 upstream YP_001934004.1 R 1103171 1103266 AAAGTTTAGGGTCTGCGGTGCGTGTTCTTTTTCGATACGGTGATCATGTTTCCTCTTGCTGAAGAAAGGTGAGGATCAGGGGAGGGGTTAGGAATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1103171:1103266:R YP_001934004.1|Treponema_pallidum_SS14_uid58977|gpsA NC_010741.1 upstream YP_001934005.1 R 1103717 1103841 GGACAGGGTGACTCACCATACGGTGAAGGAAGGGTAAAAAGAGAAAGTGTGGGGAGGACTTGCATAAAGAAAGAATGGTGGGTACGCTGGCGCGCCACGTGTATTCGCTAGGACGAGGAAATCAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1103717:1103841:R YP_001934005.1|Treponema_pallidum_SS14_uid58977|ndk NC_010741.1 upstream YP_001934006.1 R 1104451 1104484 ACATCAGAGGCGTATGAAATAGGAGCAGGACGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1104451:1104484:R YP_001934006.1|Treponema_pallidum_SS14_uid58977|pth NC_010741.1 upstream YP_001934007.1 R 1105421 1105624 GCGTTCCTCCTCATAACGAGTCATATCTTCACGTTTGCGCCGTATGCCTACACGCACCGCGCGGGGCGCATTCTATACATTTCCTTTTGAAGAATCAAGAGAACTGTAGCGCGCCGTGGGAAAGGGAGGTATGCACAGAGGGTCCAGTGGCGTGATAGGGACACCGAACAGATCTCCTCTGGTTTATCGTAAATGGCATGATAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1105421:1105624:R YP_001934007.1|Treponema_pallidum_SS14_uid58977|sigA NC_010741.1 upstream YP_001934008.1 D 1105421 1105624 ATATCATGCCATTTACGATAAACCAGAGGAGATCTGTTCGGTGTCCCTATCACGCCACTGGACCCTCTGTGCATACCTCCCTTTCCCACGGCGCGCTACAGTTCTCTTGATTCTTCAAAAGGAAATGTATAGAATGCGCCCCGCGCGGTGCGTGTAGGCATACGGCGCAAACGTGAAGATATGACTCGTTATGAGGAGGAACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1105421:1105624:D YP_001934008.1|Treponema_pallidum_SS14_uid58977|groES NC_010741.1 upstream YP_001934009.1 R 1107837 1107836 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1107837:1107836:R YP_001934009.1|Treponema_pallidum_SS14_uid58977|TPASS_1014 NC_010741.1 upstream YP_001934010.1 R 1108228 1108227 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1108228:1108227:R YP_001934010.1|Treponema_pallidum_SS14_uid58977|nusB NC_010741.1 upstream YP_001934011.1 R 1109310 1109381 CTTGCCCTGCTGCGTATAGTTTCTCCGGCGTGTGTGCTGGTGACTGAGTCGCGGTTGTTACGGGGAGTTCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1109310:1109381:R YP_001934011.1|Treponema_pallidum_SS14_uid58977|tpn39b NC_010741.1 upstream YP_001934012.1 R 1111200 1111370 GTGTGTGCTCCTTATATTTTTTAAGGGTGCGAAACTGTCTTGCGAGAGGCTAGAGGTGTGTGCGAATTCTGTCAAGGATCTTGTCGCAAGGTTGCTCAGAGAGTCCCCGTTTCTTTTTCCCGTTTAGGGTCAGATGTTGACCGCAGCAGGGAAAAGGCGATAATACCCTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1111200:1111370:R YP_001934012.1|Treponema_pallidum_SS14_uid58977|alaS NC_010741.1 upstream YP_001934013.1 D 1111200 1111370 GGAGGGTATTATCGCCTTTTCCCTGCTGCGGTCAACATCTGACCCTAAACGGGAAAAAGAAACGGGGACTCTCTGAGCAACCTTGCGACAAGATCCTTGACAGAATTCGCACACACCTCTAGCCTCTCGCAAGACAGTTTCGCACCCTTAAAAAATATAAGGAGCACACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1111200:1111370:D YP_001934013.1|Treponema_pallidum_SS14_uid58977|TPASS_1018 NC_010741.1 upstream YP_001934014.1 D 1112886 1112906 GCCTCAGGGAGAGGGGAGAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1112886:1112906:D YP_001934014.1|Treponema_pallidum_SS14_uid58977|gatC NC_010741.1 upstream YP_001934015.1 D 1113351 1113350 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1113351:1113350:D YP_001934015.1|Treponema_pallidum_SS14_uid58977|gatA NC_010741.1 upstream YP_001934016.1 D 1114864 1114863 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1114864:1114863:D YP_001934016.1|Treponema_pallidum_SS14_uid58977|gatB NC_010741.1 upstream YP_001934017.1 R 1117857 1117902 CGGCCCGCCGTGCAGTGCTTTTTCTTTCTGACGTAAGAGAAATGGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1117857:1117902:R YP_001934017.1|Treponema_pallidum_SS14_uid58977|sms NC_010741.1 upstream YP_001934018.1 R 1118398 1118524 GCGCTTTTGTCTCTGTGCTATCCAGAGCCTCCAGGAGGATGTGCTTAAACTTACGGATGAGGTGGGTGCTGTTCTGCAGACTCGCTTGAGTTACCTTGGCGCGCTTTCCTGCCCGATAGAGGAGTTG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1118398:1118524:R YP_001934018.1|Treponema_pallidum_SS14_uid58977|recX NC_010741.1 upstream YP_001934019.1 R 1118915 1118929 GGAGTGGTAAAGAGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1118915:1118929:R YP_001934019.1|Treponema_pallidum_SS14_uid58977|rpsI NC_010741.1 upstream YP_001934020.1 R 1119359 1119758 GTTTGTTCAAGTTAGCTGATTTCTTTCAGCAGAAGGTTTCTTCAGGAAGTTTTCCGCAACTATCTGGAGAGTATACGCATTCTAACTGTCTTTGTGCTAGCGCAGCTTGACACAGAATGATTTTTATGAGACGATCGGGAGATTTTGCGCGGGAGGCGGTGGTGGGCGCGGTTTTGGTTGGTGTGCTGCTGATGGGAGCGGCGGTTTTCGCTCTTCTTTCCCCTATGGAGTACGGTTGTGGTCTCGGGTGGGCGCAGGATGCACTGCGGTTCTTGCGTGGTGCTGCGCCAGTCGGCGGTATTTTTGCTGGTTTTATATCTCTCCTTGTAGGGGTGGCAAACATGCGTGATCGTGCGCCCACGCGCAAGCTACCGGAGCGTGTGGATAAAGGAGCAGAGGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1119359:1119758:R YP_001934020.1|Treponema_pallidum_SS14_uid58977|rplM NC_010741.1 upstream YP_001934021.1 D 1119391 1119790 CTTGCGCGTGGGCGCACGATCACGCATGTTTGCCACCCCTACAAGGAGAGATATAAAACCAGCAAAAATACCGCCGACTGGCGCAGCACCACGCAAGAACCGCAGTGCATCCTGCGCCCACCCGAGACCACAACCGTACTCCATAGGGGAAAGAAGAGCGAAAACCGCCGCTCCCATCAGCAGCACACCAACCAAAACCGCGCCCACCACCGCCTCCCGCGCAAAATCTCCCGATCGTCTCATAAAAATCATTCTGTGTCAAGCTGCGCTAGCACAAAGACAGTTAGAATGCGTATACTCTCCAGATAGTTGCGGAAAACTTCCTGAAGAAACCTTCTGCTGAAAGAAATCAGCTAACTTGAACAAACGCTCAGTCCGCCTGATGATGGGCGCATAACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1119391:1119790:D YP_001934021.1|Treponema_pallidum_SS14_uid58977|TPASS_1026 NC_010741.1 upstream YP_001934022.1 D 1121561 1121681 GTCTATGAAAAAAGGGTAAAAGATGCCTCGCCAAAAAGAGAACTACCTGTCACCGTCCCCCGTGGTCGGGATTCTTCGTGACTGGGGAGTGCTGTGCACCTTACGCTTAAAGGGGAAACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1121561:1121681:D YP_001934022.1|Treponema_pallidum_SS14_uid58977|udp NC_010741.1 upstream YP_001934023.1 R 1124487 1124568 GGAACATGCCGTCAGTGCAGGGCGCCGCCCGGGCGCGGTGGCACTCGGTGCGGTGCGGCAGTTTTCGGTTGCAGGGCTGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1124487:1124568:R YP_001934023.1|Treponema_pallidum_SS14_uid58977|uvrD NC_010741.1 upstream YP_001934024.1 R 1125256 1125412 ACAGGGGGGTGGGGGCGCGCTATACTTGCAATCCTCAGTGCGCAGAGGGAGTTTTGTATCGCCCCGTGCGCCGCGCGCTGCAGCGCAGCGCACGTGCCCGTTTTCATGGCACCGCATTATGAGCGCACGAAACGTTTAAAACTCAGGGAGCGCGAGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1125256:1125412:R YP_001934024.1|Treponema_pallidum_SS14_uid58977|TPASS_1029 NC_010741.1 upstream YP_001934025.1 R 1125773 1125799 GCCTGAGCGCGCCCCGCCGCGACGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1125773:1125799:R YP_001934025.1|Treponema_pallidum_SS14_uid58977|TPASS_1030 NC_010741.1 upstream YP_001934026.1 D 1125773 1125799 CTGCGTCGCGGCGGGGCGCGCTCAGGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1125773:1125799:D YP_001934026.1|Treponema_pallidum_SS14_uid58977|tprL NC_010741.1 upstream YP_001934027.1 R 1127847 1127857 CGGGGGGACGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1127847:1127857:R YP_001934027.1|Treponema_pallidum_SS14_uid58977|TPASS_1032 NC_010741.1 upstream YP_001934028.1 R 1128794 1128866 ACTGCGTACTGGAACGGTATCACACTGGGGGGAGAATGGACAGCAGGGAGGAAAACGCTCATAATGACCGCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1128794:1128866:R YP_001934028.1|Treponema_pallidum_SS14_uid58977|TPASS_1033 NC_010741.1 upstream YP_001934029.1 D 1128794 1128866 GTGCGGTCATTATGAGCGTTTTCCTCCCTGCTGTCCATTCTCCCCCCAGTGTGATACCGTTCCAGTACGCAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1128794:1128866:D YP_001934029.1|Treponema_pallidum_SS14_uid58977|TPASS_1034 NC_010741.1 upstream YP_001934030.1 R 1132760 1132911 GAAAGACTACCTCCTATTCAGGACGGGTTTTTTATGTATCCAAAAGCTCTGGGGAGGAGCGGCTGGCAGTGACGGCAAGAAACTTGCATGTACCGGATAAAAAACCGTACACTTTTCATCCTATCTGCTGTGAAATGGGAGCTCAACGAATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1132760:1132911:R YP_001934030.1|Treponema_pallidum_SS14_uid58977|valS NC_010741.1 upstream YP_001934031.1 D 1132760 1132911 AATTCGTTGAGCTCCCATTTCACAGCAGATAGGATGAAAAGTGTACGGTTTTTTATCCGGTACATGCAAGTTTCTTGCCGTCACTGCCAGCCGCTCCTCCCCAGAGCTTTTGGATACATAAAAAACCCGTCCTGAATAGGAGGTAGTCTTTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1132760:1132911:D YP_001934031.1|Treponema_pallidum_SS14_uid58977|TPASS_1036 NC_010741.1 upstream YP_001934032.1 R 1136097 1136254 GTAGAGCAGGCTGTACGTACAACACACGTACGGCCATGCGCTGGAAGTCCTGTATTTTGCACATAAGGCCTCTCTCCCGTTACAGCATGAGGGGAGGGAGGTGTTGGTTGAAGTGCTTGGGGAAGTGTGCATAATCGTCCTACGGAAGGGGGCGTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1136097:1136254:R YP_001934032.1|Treponema_pallidum_SS14_uid58977|hlyIII NC_010741.1 upstream YP_001934033.1 R 1136789 1137014 GTCAATGATCTTACCGGTTTGTTGGGAGGCTTGGTGGATTGAGAATTACGTCTCCTGGAAAAAAGATTTCGCTGAAACTTCACGAAATCTCGGTGAAAATAAATGATTATTTTACCAATCGGTGAAAAAAAGCCGGGAAAAGTCCAAAAAGACAGTGGTTATGCTCCATTTCTTTCGATTTTTTGTTGGCATGGTTTTTGCTTTAAAGTTTGGAGGAGAAAGAACG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1136789:1137014:R YP_001934033.1|Treponema_pallidum_SS14_uid58977|tpF1 NC_010741.1 upstream YP_001934034.1 D 1136789 1137014 CGTTCTTTCTCCTCCAAACTTTAAAGCAAAAACCATGCCAACAAAAAATCGAAAGAAATGGAGCATAACCACTGTCTTTTTGGACTTTTCCCGGCTTTTTTTCACCGATTGGTAAAATAATCATTTATTTTCACCGAGATTTCGTGAAGTTTCAGCGAAATCTTTTTTCCAGGAGACGTAATTCTCAATCCACCAAGCCTCCCAACAAACCGGTAAGATCATTGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1136789:1137014:D YP_001934034.1|Treponema_pallidum_SS14_uid58977|apt NC_010741.1 upstream YP_001934035.1 R 1138666 1138665 Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1138666:1138665:R YP_001934035.1|Treponema_pallidum_SS14_uid58977|lysS2 NC_010741.1 upstream YP_001934036.1 R 1139379 1139461 CTACCTATGATACAACCTATTGTATTTTGCCTGCAATAAACGAAGAGGTTATACGCGCGTTGCTTTGTGGGTGTAGATTATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1139379:1139461:R YP_001934036.1|Treponema_pallidum_SS14_uid58977|clpP NC_010741.1 upstream TPASS_t0001 R 24423 24478 TTGTTGGCTGAGGAAACGTCGCACCCCCTTCTCAGAACCGGCTGGGTGCGGCCGTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24423:24478:R TPASS_t0001|Treponema_pallidum_SS14_uid58977|TPASS_t0001 NC_010741.1 upstream TPASS_t0002 R 24568 24624 TTACGGGACTTGTCCCGCTGAGGGTGGTGTCCTGTGGGGCTCTGCCGTTGTTGTTGA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24568:24624:R TPASS_t0002|Treponema_pallidum_SS14_uid58977|TPASS_t0002 NC_010741.1 upstream TPASS_t0003 R 24699 24729 GTTTGGGGGCCGGTTGGCATCCCACTCCCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24699:24729:R TPASS_t0003|Treponema_pallidum_SS14_uid58977|TPASS_t0003 NC_010741.1 upstream TPASS_t0004 R 24817 24856 CGGGGAGTATTCGGTACGGTGCGTCTGTTTGCTGTTTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24817:24856:R TPASS_t0004|Treponema_pallidum_SS14_uid58977|TPASS_t0004 NC_010741.1 upstream TPASS_t0005 R 24942 25103 ATACTCCCCTACTCAAGCTACAAGGGGGAGCGTAACATAAAAACGCTACTTCTCTAAGAGCTTCTCCCCAGAAGGGAAGTTTTCTACACGTACCACTTTTTTATGCTGCTCGTACAAAGACTTGACAGGAGCAACGTTTACACGCAGGATGGAAGGGCGTCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:24942:25103:R TPASS_t0005|Treponema_pallidum_SS14_uid58977|TPASS_t0005 NC_010741.1 upstream TPASS_t0006 D 124638 124896 ACGGAGTAAGTGTTCTCCTCCTTGTATCGCAGCCAGGCGCGCTTTGCAATAGCGCTACTGACTGGAAGGAGCGACTGCACAATTGTATCGGCAATGTGCAGTTGTGTGTCTTTGCCGGAATGCGCGTGTGCTGTGGGGCTGCTGATGGCAGCTGCCAGTCTGCGTCGGTCAAGTGGAGGTACCGGGTAAGTTTTTGATCTGAGTGAGTGTTCGTTATCTGCTTGACAGAAAATACGTGTCGTACTAGCCTGGGCCTCCC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:124638:124896:D TPASS_t0006|Treponema_pallidum_SS14_uid58977|TPASS_t0006 NC_010741.1 upstream TPASS_t0007 D 124968 124976 AGCGCGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:124968:124976:D TPASS_t0007|Treponema_pallidum_SS14_uid58977|TPASS_t0007 NC_010741.1 upstream TPASS_t0008 D 125049 125084 TTCTTTTCTCTATTTAAAAAGGGGAGGAGCGCGTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:125049:125084:D TPASS_t0008|Treponema_pallidum_SS14_uid58977|TPASS_t0008 NC_010741.1 upstream TPASS_t0009 D 157646 157788 CCGCCGAGTCCTGGGCATGCCGCCGAATGCAGTACATCGTGTTGCGCGCCGCGCAGTGTCGGGGTATCATGGAAGGCGGTACAGGCACTGCGTGCACGGCGCGCTTGTGCGTCGCGCGCGGTCGCATACCAAAACAATACGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:157646:157788:D TPASS_t0009|Treponema_pallidum_SS14_uid58977|TPASS_t0009 NC_010741.1 upstream TPASS_t0010 R 169214 169613 TGCAAGGAAAACGATGATAAGAAATGAGGGTGTCACTACCCCCAGCGTGGTGCAAAGCGCGCCCCAAAAGCGTGCACGCTTTGCACCGCAAAAGGTAGCGACGTTTACCGCAATAATGCCAGGTGTACACTGACCGATGGCAAAACAATTCACCAACTCTTCCTCATCCACCCACTTTTTGTGTTCGCAGAGCAAACGCTTCAAAAGCGGAAGCATCGCAACTCCACCACCAAAAGTACTCAAACCTATCTTGAAAAAGACCCAGAACAACTGAGCAAGCTCGCTACACGAAGGTCGGCGTGAACTCAGAGCATGCCTCCTTTTTGAAAGGAAAAACGAGAGAATACACAAAAAGCCATTGATCTCCTGAAGCCAAATATGACAGGCTTGCGCCCGCTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:169214:169613:R TPASS_t0010|Treponema_pallidum_SS14_uid58977|TPASS_t0010 NC_010741.1 upstream TPASS_t0011 D 190950 191074 CTAAACCTGCGTGTCGTATCCTCTGGTCGTATGTATGATTGTAAGGCTCCGCTTCAAGCTGGGGCGGAGCGTCCTGCTTTGTGGCTTGACTTCGGGCTCTAGTCGTGGTACGCTCTGTGCGTCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:190950:191074:D TPASS_t0011|Treponema_pallidum_SS14_uid58977|TPASS_t0011 NC_010741.1 upstream TPASS_t0012 D 232840 232943 AAGGGTATGGGCATGGCATGGTGCCGTGTTCGCCGTGTGGCGGAAGCCACACGGTAGGTTTTTCTGCTCCTGCACGGCAGTCTCTCCCCTTCCCTTTTGAAAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:232840:232943:D TPASS_t0012|Treponema_pallidum_SS14_uid58977|TPASS_t0012 NC_010741.1 upstream TPASS_t0013 D 242939 243071 GTGACGCGCCTTTCTTTCTGGGGCAGGCTGGTTGGCTGCCTGTTTAGGGAGGTGTTTCGTGCTTGATGTGTGAGGTGAGGCGTTATACAATGCGGGCCGGCCTCCGGGCGGCTCGGGGAGTCCTGTCTGTGTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:242939:243071:D TPASS_t0013|Treponema_pallidum_SS14_uid58977|TPASS_t0013 NC_010741.1 upstream TPASS_t0014 D 243344 243397 GCTGTCGTCATATCTGTTACGCACGGGGTTTTCTGGTGTTTTCCGGGGATTTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:243344:243397:D TPASS_t0014|Treponema_pallidum_SS14_uid58977|TPASS_t0014 NC_010741.1 upstream TPASS_t0015 D 281274 281376 AAGGGTATGGGCATGGCATGGTGCCGTGTTCGCCGTGTGGCGGAAGCCACACGGTAGGTTTTTCTGCTCCTGCACGGCAGTCTCTCCCCTTCCCTTTTGAAAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:281274:281376:D TPASS_t0015|Treponema_pallidum_SS14_uid58977|TPASS_t0015 NC_010741.1 upstream TPASS_t0016 R 353075 353165 CGGCTCCCTCAATGGGAGACACGGGGCCTCACGCAAGAAGACTACATGAACAGCTGTACCTTTTGTTCCTCGTGTGATAGGCTGCGCGCGG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:353075:353165:R TPASS_t0016|Treponema_pallidum_SS14_uid58977|TPASS_t0016 NC_010741.1 upstream TPASS_t0017 R 355099 355191 GGGATCCTCCCGTCGCTTGCCTTTCGTTCTATATTTATATTCCCAGGTGATCTTGACACCACCTCGGGTGCTGCGCTAGCATGCGCCCGTCCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:355099:355191:R TPASS_t0017|Treponema_pallidum_SS14_uid58977|TPASS_t0017 NC_010741.1 upstream TPASS_t0018 D 396835 396842 GATATCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:396835:396842:D TPASS_t0018|Treponema_pallidum_SS14_uid58977|TPASS_t0018 NC_010741.1 upstream TPASS_t0019 D 524844 524955 AGTCCGCATTGTACGTGCTCTGCTGTTCTGCGCGTGTAGTTTTTCTTAGTGCAGTGAGAGCGGCTTGACAAAGCCGTGGGTTCGCGCGTACAGTCCGGGGCGCGTAGTCATC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:524844:524955:D TPASS_t0019|Treponema_pallidum_SS14_uid58977|TPASS_t0019 NC_010741.1 upstream TPASS_t0020 D 525031 525039 TGTTCGTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:525031:525039:D TPASS_t0020|Treponema_pallidum_SS14_uid58977|TPASS_t0020 NC_010741.1 upstream TPASS_t0021 D 541829 542187 ACGCGCCCTCCCTGGTCGGCTGCCAGGGTAGCACGGATAGCTCGTTTAGGAAACCGTTCCTGCAAAAAAGGGGTGCCGGCGTATGGGGCAGGGAGTTTATACCTAAAGACAGGGCCTATGCGGAACGAGTACGGCAAACGGAGTGTTCCTTGTAGGGTGAACCCGACGGACCCAGTGACTGCACAGTCAATCCCCTACTACGCCCCTGTTGTGTTCGGCGACTTGGATATCTTCCTAGAGGTTTGGACTGATTGAAGGAAATGTTGAGCGAAAAGAGGAGGTGCGTGGGACGCGACGATACGATTCATCTTGATCCTTTTTGCATGATATGTGATCCTGGGGGGAGGGTGTCGGAGGAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:541829:542187:D TPASS_t0021|Treponema_pallidum_SS14_uid58977|TPASS_t0021 NC_010741.1 upstream TPASS_t0022 D 542261 542319 GGGGCGGTTGGGTGTCTGCATCCTGTTGGGCGAGTTTTTGCTTGCCGSATSTCTTCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:542261:542319:D TPASS_t0022|Treponema_pallidum_SS14_uid58977|TPASS_t0022 NC_010741.1 upstream TPASS_t0023 D 542401 542410 GGGCGCCTGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:542401:542410:D TPASS_t0023|Treponema_pallidum_SS14_uid58977|TPASS_t0023 NC_010741.1 upstream TPASS_t0024 D 582840 582860 TATACCCCGGCGGGTGCTGAT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:582840:582860:D TPASS_t0024|Treponema_pallidum_SS14_uid58977|TPASS_t0024 NC_010741.1 upstream TPASS_t0025 R 600289 600384 GGTAATCCCCTTTGCGCAAGGTCACAGCGTGCCTGGAGTATCGGTTGGTTTACCCTTGAACGATTGCGTCTTTTTTTGTTAGCCTGAGGGGTCCTC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:600289:600384:R TPASS_t0025|Treponema_pallidum_SS14_uid58977|TPASS_t0025 NC_010741.1 upstream TPASS_t0026 D 643426 643603 ATCGAGAACGGTAAAAAGAGGAGCACCCACGGCCGCTACTGTAGCACAAAAGCCAGGACCCGTAAACGAGCCCACCGCAGTGAGAGCCTCTCTTCAAGAGAGCCACAAGTCCGTACAGGAACTCTTGACTTTTACATACAACTGGTGTCTGCTGACGGCGCCCGGGTGTGGGGCACAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:643426:643603:D TPASS_t0026|Treponema_pallidum_SS14_uid58977|TPASS_t0026 NC_010741.1 upstream TPASS_t0027 R 643762 643812 TCTGCGCACTGTGCGGTGCGCGTCCCTTTCTGTGTGGTTTCTTTGCGTGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:643762:643812:R TPASS_t0027|Treponema_pallidum_SS14_uid58977|TPASS_t0027 NC_010741.1 upstream TPASS_t0028 R 643887 643955 TTTCCTTGGGTGATCTATCATCGCCGCTTGATAACTTTGTGCGGGTGATGTAGGATGCGCGCAAGTTCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:643887:643955:R TPASS_t0028|Treponema_pallidum_SS14_uid58977|TPASS_t0028 NC_010741.1 upstream TPASS_t0029 R 644029 644187 GCCCGGTGTCTCGGCGCATTATACGCGCGGCTAAAGAAATCATAGGCAGCAATTTTATTGTTTCTTGCGTCAAGCACGGGGAGGCAGGGGGAAGGCAGGACTTGTCAGAGTGTAAAAAAAAGGGATAGGATGGCGGTGGTGTGCGGTCGGGGGTTTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:644029:644187:R TPASS_t0029|Treponema_pallidum_SS14_uid58977|TPASS_t0029 NC_010741.1 upstream TPASS_t0030 D 659662 659743 CTTGACTAAAATCAGACGTATGGAATACGGTTGCCCGCCTCTTCTGTGGACCTTCCCAGGCCCGCAGCAGGTTACAGAGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:659662:659743:D TPASS_t0030|Treponema_pallidum_SS14_uid58977|TPASS_t0030 NC_010741.1 upstream TPASS_t0031 R 698912 698925 CTGTGCGTGCGCAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:698912:698925:R TPASS_t0031|Treponema_pallidum_SS14_uid58977|TPASS_t0031 NC_010741.1 upstream TPASS_t0032 R 698998 699133 GCACACCGCGCGCAGCCTGTCATACAGAAAAAAAAAGGTCAAGTTCCTCACGATGCTCGAGGAAAAGCAGCACAGGAGAAGGAGAATGCAGGTCTTGACAGGTGCGCATACTTTGCACTAGGCTCCCGCCGGAGCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:698998:699133:R TPASS_t0032|Treponema_pallidum_SS14_uid58977|TPASS_t0032 NC_010741.1 upstream TPASS_t0033 D 698998 699133 CGCTCCGGCGGGAGCCTAGTGCAAAGTATGCGCACCTGTCAAGACCTGCATTCTCCTTCTCCTGTGCTGCTTTTCCTCGAGCATCGTGAGGAACTTGACCTTTTTTTTTCTGTATGACAGGCTGCGCGCGGTGTGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:698998:699133:D TPASS_t0033|Treponema_pallidum_SS14_uid58977|TPASS_t0033 NC_010741.1 upstream TPASS_t0034 D 731227 731297 ACAAGAATCGAGACTTTTTCGCAGGTAACCGTTGACAGCCTATCCATTCTTAACACACAGTGTCAAGCGTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:731227:731297:D TPASS_t0034|Treponema_pallidum_SS14_uid58977|TPASS_t0034 NC_010741.1 upstream TPASS_t0035 D 735569 735686 TATAACAAAAAACGGTGCACCCGATAAGCAGTCGGAGCTACAGCACAGCATTCTAGGATTGTTGACACGTTATATATTTTTATCCACCCTTGCAGGGTTTTTGCTCGCAGCGTACCAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:735569:735686:D TPASS_t0035|Treponema_pallidum_SS14_uid58977|TPASS_t0035 NC_010741.1 upstream TPASS_t0036 D 743826 743914 CGAGCACGCTTCTTACAGGATCCTACGACAACAGTGCAGAGTGAGATAAGCAATTGCACAAAAACACCCTCGCTGTTATGCTGCGCGCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:743826:743914:D TPASS_t0036|Treponema_pallidum_SS14_uid58977|TPASS_t0036 NC_010741.1 upstream TPASS_t0037 R 761543 761660 TTGTGTTTATTTCGTAGATCGGGGTATGGGGATAGGATGAGAGGGTGTTCCCCGGGGTTTGTACAGCGTTTTGAAGAATTGACGCGTGTGTTGTTTCGTGCTACAAGTCCCGCCGGAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:761543:761660:R TPASS_t0037|Treponema_pallidum_SS14_uid58977|TPASS_t0037 NC_010741.1 upstream TPASS_t0038 D 768618 768696 GGGTCATCGTAACACCTATCGCGCCGCGCAACAAGCACTGCTTGACGTACACGATCCCCCCTGTGTAGAATGCGCACCG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:768618:768696:D TPASS_t0038|Treponema_pallidum_SS14_uid58977|TPASS_t0038 NC_010741.1 upstream TPASS_t0039 R 843327 843469 AAGAAAACCCTTCCATGGTGGGAAATATAGTTTTTCTAGTCAAGGGATTAGAGCAGCTTTCAGGGCACGGGATGCAAAGGCGGCGTACTTGACAAAATGCCAATTCCAATACACGCTGCCCGCGGCGCTGCGCGTGGCGCCGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:843327:843469:R TPASS_t0039|Treponema_pallidum_SS14_uid58977|TPASS_t0039 NC_010741.1 upstream TPASS_t0040 D 843327 843469 ACGGCGCCACGCGCAGCGCCGCGGGCAGCGTGTATTGGAATTGGCATTTTGTCAAGTACGCCGCCTTTGCATCCCGTGCCCTGAAAGCTGCTCTAATCCCTTGACTAGAAAAACTATATTTCCCACCATGGAAGGGTTTTCTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:843327:843469:D TPASS_t0040|Treponema_pallidum_SS14_uid58977|TPASS_t0040 NC_010741.1 upstream TPASS_t0041 D 1004118 1004268 GCGGCCTATTCTACAACACCCCCCGACGCGCCTAGAGCGCTACACCGCGCCGCAGTGCGCCAGGGAACAGGGTGCACGAGGGGCATCACACCCGCAGGAAACACCCTTGCAGGACGCGCATATTTGGTGTATAGCTGGAGCCAGCAGTCCT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1004118:1004268:D TPASS_t0041|Treponema_pallidum_SS14_uid58977|TPASS_t0041 NC_010741.1 upstream TPASS_t0042 R 1006952 1007143 AAACTCCTCCTCGGGAACGTCACGCAGTGGGTGCACTCGCAAAATAGTGCAGCCACGACACGCGCACCCTGCCCGCGCAAGGGTAGGGGAAAGCTCTGTTGCTGTCAACCGCAGCCACAGCAGGATCCGGTGCCACCCTGGACACCGGTAGACTTGACGGGCCGACATTTTCCGGTACACTGGGGCCTGCGC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1006952:1007143:R TPASS_t0042|Treponema_pallidum_SS14_uid58977|TPASS_t0042 NC_010741.1 upstream TPASS_t0043 D 1018856 1018965 GCGTTTATCGTAACACAAAGAAACTGGTTCTGTCAGGCAACCGCTTCACGCCCATAAGAGCGCTTGACACGTCCGGCGCATTCCCGTTACGCTCGGCCCCGGTTTCGTTA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1018856:1018965:D TPASS_t0043|Treponema_pallidum_SS14_uid58977|TPASS_t0043 NC_010741.1 upstream TPASS_t0044 R 1079909 1080060 GAGAAACGGGAAGCGTGCAAGGTCCAGCTGTCTGAAGAGGGATTGAGGATCCTCACTTTGCTTTACAAGCAGCGCAAGGTGGCAGTGCGAATCACTGTATATGTTGACCTCCCGGCTACTTACCCGCTACAGTGGCAGCACGGCCGCACAAC Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1079909:1080060:R TPASS_t0044|Treponema_pallidum_SS14_uid58977|TPASS_t0044 NC_010741.1 upstream TPASS_t0045 R 1084029 1084087 CGGGCACTGCTACGCTTGATCGAGCGCAGCGTTGTTTGCTACGGTTGGCGCCGGTTTTT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:1084029:1084087:R TPASS_t0045|Treponema_pallidum_SS14_uid58977|TPASS_t0045 NC_010741.1 upstream TPASS_r0001 D 231101 231344 AGAATTTTATGCGGGTGGTGGGGGTTGACAAGGGGTATAGGTTATGGGTAGAGTGGTTGAGTTGTGTGTGCTGCGGGTATGTGGTGCGCGCGGAATGATATTTGAGAGGGTGAGGGAAGGGGGAGGGAAGGGTGTGGGGCGGACAGGTTGAGGTTTCGGACCCTGGAAACGGGGTTTAGAATAATGATGGAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGTGCGTTTTAAGCATGCAAG Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:231101:231344:D TPASS_r0001|Treponema_pallidum_SS14_uid58977|rrs1 NC_010741.1 upstream TPASS_r0002 D 233018 233132 CTATTATTCTTTATGTCCCTTTGTTTTGTTTATGGGGTAAGGAGTAGGTGGTAGGTGATTTTTGAGAGTATTAGGGTGGGGTGTGAAGTTGAGAAGGGATGGATAATATGGTCAA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:233018:233132:D TPASS_r0002|Treponema_pallidum_SS14_uid58977|rrl1 NC_010741.1 upstream TPASS_r0003 D 236034 236082 AAGGTATTAAGCCGACCAGTACTAATAAGTCGTGAGGCTTGACCATATT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:236034:236082:D TPASS_r0003|Treponema_pallidum_SS14_uid58977|rrf1 NC_010741.1 upstream TPASS_r0004 D 279632 279778 TATTTGAGAGGGTGAGGGAAGGGGGAGGGAAGGGTGTGGGGCGGACAGGTTGAGGTTTCGGACCCTGGAAACGGGGTTTAGAATAATGATGGAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGTGCGTTTTAAGCATGCAAGT Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:279632:279778:D TPASS_r0004|Treponema_pallidum_SS14_uid58977|rrs2 NC_010741.1 upstream TPASS_r0005 D 281451 281566 GGGAAAGCCCACTATTATTCTTTATGTCCCTTTGTTTTGTTTATGGGGTAAGGAGTAGGTGGTAGGTGATTTTTGAGAGTATTAGGGTGGGGTGTGAAGTTGAGAAGGGATGGATA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:281451:281566:D TPASS_r0005|Treponema_pallidum_SS14_uid58977|rrl2 NC_010741.1 upstream TPASS_r0006 D 284468 284522 TACGTACCGTAAGGTATTAAGCCGACCAGTACTAATAAGTCGTGAGGCTTGACCA Treponema_pallidum_SS14_uid58977 Treponema_pallidum_SS14_uid58977:NC_010741.1:284468:284522:D TPASS_r0006|Treponema_pallidum_SS14_uid58977|rrf2