; retrieve-seq -v -org Ustilago_maydis_uid14007 -all -type upstream -feattype CDS -from 0 -to 2 -format wc -nocomment -label id,ctg,reg_left,reg_right,orf_strand -o /software/CC/bio/opt/rsat/rsa-tools//public_html/data/genomes/Ustilago_maydis_uid14007/genome/Ustilago_maydis_uid14007_start_codons.wc
; organism      	Ustilago_maydis_uid14007
; sequence type 	upstream
; feature type  	cds
; Output format 	wc
; Line width    	60
; relative coordinates
;        from    0
;        to      2
;        size    3
; Queries       	20
;
UsmafMp01|NC_008368.1|1076|1078|D	\ATG\
UsmafMp01|NC_008368.1|4701|4703|D	\ATG\
UsmafMp01|NC_008368.1|5795|5797|D	\ATG\
UsmafMp02|NC_008368.1|10186|10188|D	\ATG\
UsmafMp03|NC_008368.1|11574|11576|D	\GTG\
UsmafMp04|NC_008368.1|13190|13192|D	\ATG\
UsmafMp05|NC_008368.1|16742|16744|R	\ATG\
UsmafMp06|NC_008368.1|18251|18253|R	\ATG\
UsmafMp07|NC_008368.1|18582|18584|R	\ATG\
UsmafMp08|NC_008368.1|30383|30385|R	\GTG\
UsmafMp08|NC_008368.1|26791|26793|R	\ATG\
UsmafMp08|NC_008368.1|29629|29631|R	\ATG\
UsmafMp09|NC_008368.1|32579|32581|D	\ATG\
UsmafMp10|NC_008368.1|34604|34606|D	\ATG\
UsmafMp11|NC_008368.1|39486|39488|D	\ATG\
UsmafMp12|NC_008368.1|40859|40861|D	\ATG\
UsmafMp13|NC_008368.1|45822|45824|D	\ATG\
UsmafMp14|NC_008368.1|46103|46105|D	\ATG\
UsmafMp15|NC_008368.1|53773|53775|R	\ATG\
UsmafMp16|NC_008368.1|56492|56494|R	\ATG\

; Host name	nic48
; Job started	2011_11_26.230544
; Job done	2011_11_26.230545
; Seconds	0.14