-- dump date 20140620_141627 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_068414.1 51593847 2952894 complement(12..2210) 1 NC_006153.2 similar to Y. pestis YPCD1.72c; ypkA; targeted effector protein kinase 2210 2952894 pYV0001 Yersinia pseudotuberculosis IP 32953 ypkA; targeted effector protein kinase YP_068414.1 12 R 273123 CDS YP_068415.1 51593848 2952895 complement(2218..2667) 1 NC_006153.2 similar to Y. pestis YPCD1.73c; hypothetical protein 2667 2952895 pYV0002 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068415.1 2218 R 273123 CDS YP_068416.1 51593849 2952896 complement(2919..3239) 1 NC_006153.2 similar to Y. pestis YPCD1.14c; transposase remnant 3239 2952896 pYV0003 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068416.1 2919 R 273123 CDS YP_068417.1 51593850 2952897 complement(3411..3650) 1 NC_006153.2 hypothetical protein 3650 2952897 pYV0004 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068417.1 3411 R 273123 CDS YP_068418.2 229310098 2952898 complement(4823..5689) 1 NC_006153.2 RepA; replication protein 5689 2952898 pYV0005 Yersinia pseudotuberculosis IP 32953 replication protein YP_068418.2 4823 R 273123 CDS YP_068419.1 51593852 2952899 5803..5955 1 NC_006153.2 hypothetical protein 5955 2952899 pYV0006 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068419.1 5803 D 273123 CDS YP_068420.1 51593853 2952900 complement(5998..6252) 1 NC_006153.2 similar to Y. pestis YPCD1.79c; replication protein 6252 2952900 pYV0007 Yersinia pseudotuberculosis IP 32953 replication protein YP_068420.1 5998 R 273123 CDS YP_068421.1 51593854 2952901 6779..7183 1 NC_006153.2 identical to Y. pestis YPCD1.81; transposase remnant 7183 2952901 pYV0008 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068421.1 6779 D 273123 CDS YP_068422.1 51593855 2952902 complement(7489..7806) 1 NC_006153.2 similar to Y. pestis YPCD1.83c; hypothetical protein 7806 2952902 pYV0009 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068422.1 7489 R 273123 CDS YP_068423.1 51593856 2952903 complement(7978..8436) 1 NC_006153.2 similar to Y. pestis YPCD1.84c; hypothetical protein 8436 2952903 pYV0010 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068423.1 7978 R 273123 CDS YP_068424.1 51593857 2952904 8586..8774 1 NC_006153.2 identical to C-term of Y. pestis YPCC1.85; transposase remname 8774 2952904 pYV0011 Yersinia pseudotuberculosis IP 32953 transposase remname YP_068424.1 8586 D 273123 CDS YP_068425.1 51593858 2952905 complement(8771..8980) 1 NC_006153.2 hypothetical protein 8980 2952905 pYV0012 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068425.1 8771 R 273123 CDS YP_068426.1 51593859 2952906 complement(9103..10401) 1 NC_006153.2 hypothetical protein 10401 2952906 pYV0013 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068426.1 9103 R 273123 CDS YP_068427.1 51593860 2952909 complement(11386..13701) 1 NC_006153.2 similar to Y. pestis YPCD1.90c; tnpA; transposase protein 13701 2952909 pYV0016 Yersinia pseudotuberculosis IP 32953 tnpA; transposase protein YP_068427.1 11386 R 273123 CDS YP_068428.1 51593861 2952910 13865..14416 1 NC_006153.2 identical to Y. pestis YPCD1.91; resolvase 14416 2952910 pYV0017 Yersinia pseudotuberculosis IP 32953 resolvase YP_068428.1 13865 D 273123 CDS YP_068429.1 51593862 2952911 15467..15733 1 NC_006153.2 identical to Y. pestis YPCD1.93; transposase 15733 2952911 pYV0018 Yersinia pseudotuberculosis IP 32953 transposase YP_068429.1 15467 D 273123 CDS YP_068430.1 51593863 2952912 15757..16566 1 NC_006153.2 similar to Y. pestis YPCD1.94; transposase 16566 2952912 pYV0019 Yersinia pseudotuberculosis IP 32953 transposase YP_068430.1 15757 D 273123 CDS YP_068431.1 51593864 2952913 complement(16714..17139) 1 NC_006153.2 similar to Y. pestis YPCD1.95c; sycH; yopH targeting protein 17139 2952913 pYV0020 Yersinia pseudotuberculosis IP 32953 sycH; yopH targeting protein YP_068431.1 16714 R 273123 CDS YP_068432.1 51593865 2952914 complement(17484..17915) 1 NC_006153.2 similar to Y. pestis YPCD1.96c; transposase 17915 2952914 pYV0021 Yersinia pseudotuberculosis IP 32953 transposase YP_068432.1 17484 R 273123 CDS YP_068433.1 51593866 2952915 complement(17915..19087) 1 NC_006153.2 similar to fusion of Y.pestis YPCD1.03c and YPCD1.97c; transposase 19087 2952915 pYV0022 Yersinia pseudotuberculosis IP 32953 transposase YP_068433.1 17915 R 273123 CDS YP_068434.1 51593867 2952916 19220..19834 1 NC_006153.2 similar to Y. pestis YPCD1.04; transposase remnant 19834 2952916 pYV0023 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068434.1 19220 D 273123 CDS YP_068435.1 51593868 2952917 complement(19897..20289) 1 NC_006153.2 similar to Y. pestis YPCD1.05c; sycE, yerA; yopE chaperone 20289 2952917 pYV0024 Yersinia pseudotuberculosis IP 32953 sycE, yerA; yopE chaperone YP_068435.1 19897 R 273123 CDS YP_068436.1 51593869 2952918 20483..21142 1 NC_006153.2 identical to Y. pestis YPCD1.06; outer membrane virulence protein 21142 2952918 pYV0025 Yersinia pseudotuberculosis IP 32953 outer membrane virulence protein YP_068436.1 20483 D 273123 CDS YP_068437.1 51593870 2952919 complement(21282..21581) 1 NC_006153.2 similar to Y. pestis YPCD1.08c; hypothetical protein 21581 2952919 pYV0026 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068437.1 21282 R 273123 CDS YP_068438.1 51593871 2952920 complement(21574..21849) 1 NC_006153.2 similar to Y. pestis YPCD1.09c; hypothetical protein 21849 2952920 pYV0027 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068438.1 21574 R 273123 CDS YP_068439.1 51593872 2952921 complement(21960..22163) 1 NC_006153.2 similar to Y. pestis YPCD1.10c; transposase remnant 22163 2952921 pYV0028 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068439.1 21960 R 273123 CDS YP_068440.1 51593873 2952922 22359..22532 1 NC_006153.2 hypothetical protein 22532 2952922 pYV0029 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068440.1 22359 D 273123 CDS YP_068441.1 51593874 2952923 complement(22682..22975) 1 NC_006153.2 hypothetical protein 22975 2952923 pYV0030 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068441.1 22682 R 273123 CDS YP_068442.1 51593875 2952924 complement(23123..24088) 1 NC_006153.2 SopB; plasmid-partitioning protein 24088 2952924 pYV0031 Yersinia pseudotuberculosis IP 32953 plasmid-partitioning protein YP_068442.1 23123 R 273123 CDS YP_068443.2 229310099 2952925 complement(24085..25251) 1 NC_006153.2 similar to Y. pestis YPCD1.13c; plasmid-partitioning protein SopA 25251 2952925 pYV0032 Yersinia pseudotuberculosis IP 32953 plasmid-partitioning protein SopA YP_068443.2 24085 R 273123 CDS YP_068444.1 51593877 2952926 25800..25913 1 NC_006153.2 hypothetical protein 25913 2952926 pYV0033 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068444.1 25800 D 273123 CDS YP_068445.1 51593878 2952927 complement(26051..26245) 1 NC_006153.2 similar to Y. pestis YPCD1.14c; transposase remnant 26245 2952927 pYV0034 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068445.1 26051 R 273123 CDS YP_068446.1 51593879 2952928 complement(26357..26815) 1 NC_006153.2 similar to Y. pestis YPCD1.15c; hypothetical protein 26815 2952928 pYV0035 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068446.1 26357 R 273123 CDS YP_068447.1 51593880 2952929 complement(26842..27102) 1 NC_006153.2 similar to Y. pestis YPCD1.85; hypothetical protein 27102 2952929 pYV0036 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068447.1 26842 R 273123 CDS YP_068448.1 51593881 2952932 complement(28171..28353) 1 NC_006153.2 similar to Y. pestis YPCD1.18c; transposase 28353 2952932 pYV0039 Yersinia pseudotuberculosis IP 32953 transposase YP_068448.1 28171 R 273123 CDS YP_068449.1 51593882 2952933 complement(28491..29039) 1 NC_006153.2 similar to Y. pestis YPCD1.19c, yopK, yopQ, probable virulence determinant protein; yop targeting protein yopK, yopQ 29039 2952933 pYV0040 Yersinia pseudotuberculosis IP 32953 yop targeting protein yopK, yopQ YP_068449.1 28491 R 273123 CDS YP_068450.1 51593883 2952934 29513..30481 1 NC_006153.2 similar to Y. pestis YPCD1.20; yop targeted effector yopT 30481 2952934 pYV0041 Yersinia pseudotuberculosis IP 32953 yop targeted effector yopT YP_068450.1 29513 D 273123 CDS YP_068451.1 51593884 2952935 30481..30873 1 NC_006153.2 similar to Y. pestis YPCD1.21; yopT chaperone 30873 2952935 pYV0042 Yersinia pseudotuberculosis IP 32953 yopT chaperone YP_068451.1 30481 D 273123 CDS YP_068452.1 51593885 2952936 31368..31559 1 NC_006153.2 similar to Y. pestis YPCD1.24c; transposase remnant 31559 2952936 pYV0043 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068452.1 31368 D 273123 CDS YP_068453.1 51593886 2952937 31576..31995 1 NC_006153.2 similar to Y. pestis YPCD1.23; hypothetical protein 31995 2952937 pYV0044 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068453.1 31576 D 273123 CDS YP_068454.1 51593887 2952938 complement(32524..32715) 1 NC_006153.2 similar to Y. pestis YPCD1.24c; hypothetical protein 32715 2952938 pYV0045 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068454.1 32524 R 273123 CDS YP_068455.1 51593888 2952939 32890..33189 1 NC_006153.2 similar to Y. pestis YPCD1.25; transposase remnant 33189 2952939 pYV0046 Yersinia pseudotuberculosis IP 32953 transposase remnant YP_068455.1 32890 D 273123 CDS YP_068456.1 51593889 2952940 complement(33232..34884) 1 NC_006153.2 similar to Y. pestis YPCD1.26c; yopM; targeted effector protein 34884 2952940 pYV0047 Yersinia pseudotuberculosis IP 32953 yopM; targeted effector protein YP_068456.1 33232 R 273123 CDS YP_068457.1 51593890 2952941 complement(35009..35104) 1 NC_006153.2 hypothetical protein 35104 2952941 pYV0048 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068457.1 35009 R 273123 CDS YP_068458.1 51593891 2952942 complement(35209..35424) 1 NC_006153.2 hypothetical protein 35424 2952942 pYV0049 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068458.1 35209 R 273123 CDS YP_068459.1 51593892 2952943 35445..35567 1 NC_006153.2 hypothetical protein 35567 2952943 pYV0050 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068459.1 35445 D 273123 CDS YP_068460.1 51593893 2952944 35593..35916 1 NC_006153.2 similar to Y. pestis Y0056, similar to Y. intermedia transposase; hypothetical protein 35916 2952944 pYV0051 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068460.1 35593 D 273123 CDS YP_068461.1 51593894 2952945 35951..36073 1 NC_006153.2 similar to N-term Y. pestis YPCD1.24c, possible transposase remnant; hypothetical protein 36073 2952945 pYV0052 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068461.1 35951 D 273123 CDS YP_068462.1 51593895 2952946 36160..36327 1 NC_006153.2 hypothetical protein 36327 2952946 pYV0053 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068462.1 36160 D 273123 CDS YP_068463.1 51593896 2952947 complement(36551..37471) 1 NC_006153.2 similar to Y. pestis YPCD1.28c; yopD; Yop negative regulation/targeting component 37471 2952947 pYV0054 Yersinia pseudotuberculosis IP 32953 yopD; Yop negative regulation/targeting component YP_068463.1 36551 R 273123 CDS YP_068464.1 51593897 2952948 complement(37490..38695) 1 NC_006153.2 similar to Y. pestis YPCD1.29c; yopB; Yop targeting protein 38695 2952948 pYV0055 Yersinia pseudotuberculosis IP 32953 yopB; Yop targeting protein YP_068464.1 37490 R 273123 CDS YP_068465.1 51593898 2952949 complement(38673..39179) 1 NC_006153.2 similar to Y. pestis YPCD1.30c; lcrH, sycD; low calcium response protein H 39179 2952949 pYV0056 Yersinia pseudotuberculosis IP 32953 lcrH, sycD; low calcium response protein H YP_068465.1 38673 R 273123 CDS YP_068466.1 51593899 2952950 complement(39192..40172) 1 NC_006153.2 similar to Y. pestis YPCD1.31c; lcrV; V antigen, antihost protein/regulator 40172 2952950 pYV0057 Yersinia pseudotuberculosis IP 32953 lcrV; V antigen, antihost protein/regulator YP_068466.1 39192 R 273123 CDS YP_068467.1 51593900 2952951 complement(40174..40461) 1 NC_006153.2 similar to Y. pestis YPCD1.32c; lcrG; Yop regulator 40461 2952951 pYV0058 Yersinia pseudotuberculosis IP 32953 lcrG; Yop regulator YP_068467.1 40174 R 273123 CDS YP_068468.1 51593901 2952952 complement(40503..40943) 1 NC_006153.2 similar to Y. pestis YPCD1.33c; hypothetical protein 40943 2952952 pYV0059 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068468.1 40503 R 273123 CDS YP_068469.1 51593902 2952953 complement(40940..43054) 1 NC_006153.2 similar to Y. pestis YPCD1.34c; lcrD, yscV; membrane-bound Yop protein 43054 2952953 pYV0060 Yersinia pseudotuberculosis IP 32953 lcrD, yscV; membrane-bound Yop protein YP_068469.1 40940 R 273123 CDS YP_068470.1 51593903 2952954 complement(43041..43385) 1 NC_006153.2 similar to Y. pestis YPCD1.35c; yscY; type III secretion protein 43385 2952954 pYV0061 Yersinia pseudotuberculosis IP 32953 yscY; type III secretion protein YP_068470.1 43041 R 273123 CDS YP_068471.1 51593904 2952955 complement(43382..43750) 1 NC_006153.2 similar to Y. pestis YPCD1.36c; yscX; type III secretion protein 43750 2952955 pYV0062 Yersinia pseudotuberculosis IP 32953 yscX; type III secretion protein YP_068471.1 43382 R 273123 CDS YP_068472.1 51593905 2952956 complement(43747..44118) 1 NC_006153.2 similar to Y. pestis YPCD1.37c; sycN; type III secretion protein 44118 2952956 pYV0063 Yersinia pseudotuberculosis IP 32953 sycN; type III secretion protein YP_068472.1 43747 R 273123 CDS YP_068473.1 51593906 2952957 complement(44105..44383) 1 NC_006153.2 similar to Y. pestis YPCD1.38c; tyeA; Yop secretion and targeting protein 44383 2952957 pYV0064 Yersinia pseudotuberculosis IP 32953 tyeA; Yop secretion and targeting protein YP_068473.1 44105 R 273123 CDS YP_068474.1 51593907 2952958 complement(44364..45245) 1 NC_006153.2 similar to Y. pestis YPCD1.39c; yopN, lcrE; membrane-bound Yop targeting protein 45245 2952958 pYV0065 Yersinia pseudotuberculosis IP 32953 yopN, lcrE; membrane-bound Yop targeting protein YP_068474.1 44364 R 273123 CDS YP_068475.1 51593908 2952959 45305..45409 1 NC_006153.2 hypothetical protein 45409 2952959 pYV0066 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068475.1 45305 D 273123 CDS YP_068476.1 51593909 2952960 45443..46762 1 NC_006153.2 identical to Y. pestis YPCD1.40; type III secretion system ATPase 46762 2952960 pYV0067 Yersinia pseudotuberculosis IP 32953 type III secretion system ATPase YP_068476.1 45443 D 273123 CDS YP_068477.1 51593910 2952961 46759..47223 1 NC_006153.2 identical to Y. pestis YPCD1.41; yscO; type III secretion protein 47223 2952961 pYV0068 Yersinia pseudotuberculosis IP 32953 yscO; type III secretion protein YP_068477.1 46759 D 273123 CDS YP_068478.2 113911686 2952962 47223..48590 1 NC_006153.2 similar to Y. pestis YPCD1.42; yscP; type III secretion protein 48590 2952962 pYV0069 Yersinia pseudotuberculosis IP 32953 yscP; type III secretion protein YP_068478.2 47223 D 273123 CDS YP_068479.1 51593912 2952963 48587..49510 1 NC_006153.2 identical to Y. pestis YPCD1.43; type III secretion system protein 49510 2952963 pYV0070 Yersinia pseudotuberculosis IP 32953 type III secretion system protein YP_068479.1 48587 D 273123 CDS YP_068480.1 51593913 2952964 49507..50160 1 NC_006153.2 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 50160 2952964 pYV0071 Yersinia pseudotuberculosis IP 32953 type III secretion system protein YP_068480.1 49507 D 273123 CDS YP_068481.1 51593914 2952965 50162..50428 1 NC_006153.2 identical to Y. pestis YPCD1.45; yscS; type III secretion protein 50428 2952965 pYV0072 Yersinia pseudotuberculosis IP 32953 yscS; type III secretion protein YP_068481.1 50162 D 273123 CDS YP_068482.1 51593915 2952966 50425..51210 1 NC_006153.2 identical to Y. pestis YPCD1.46; yscT; type III secretion protein 51210 2952966 pYV0073 Yersinia pseudotuberculosis IP 32953 yscT; type III secretion protein YP_068482.1 50425 D 273123 CDS YP_068483.1 51593916 2952967 51210..52274 1 NC_006153.2 identical to Y. pestis YPCD1.47; yscU; type III secretion protein 52274 2952967 pYV0074 Yersinia pseudotuberculosis IP 32953 yscU; type III secretion protein YP_068483.1 51210 D 273123 CDS YP_068484.1 51593917 2952968 52850..53245 1 NC_006153.2 similar to Y. pestis YPCD1.48; virG; Yop targeting lipoprotein 53245 2952968 pYV0075 Yersinia pseudotuberculosis IP 32953 virG; Yop targeting lipoprotein YP_068484.1 52850 D 273123 CDS YP_068485.1 51593918 2952969 53369..54184 1 NC_006153.2 identical to Y. pestis YPCD1.49; lcrF, virF; thermoregulatory protein 54184 2952969 pYV0076 Yersinia pseudotuberculosis IP 32953 lcrF, virF; thermoregulatory protein YP_068485.1 53369 D 273123 CDS YP_068486.1 51593919 2952970 54263..54361 1 NC_006153.2 similar to Y. pestis YPCD1.50; hypothetical protein 54361 2952970 pYV0077 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068486.1 54263 D 273123 CDS YP_068487.1 51593920 2952971 54587..55000 1 NC_006153.2 identical to Y. pestis YPCD1.51; hypothetical protein 55000 2952971 pYV0078 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068487.1 54587 D 273123 CDS YP_068488.1 51593921 2952972 55006..56829 1 NC_006153.2 similar to Y. pestis YPCD1.52; yscC; type III secretion protein 56829 2952972 pYV0079 Yersinia pseudotuberculosis IP 32953 yscC; type III secretion protein YP_068488.1 55006 D 273123 CDS YP_068489.1 51593922 2952973 56826..58085 1 NC_006153.2 similar to Y. pestis YPCD1.53; yscD; type III secretion protein 58085 2952973 pYV0080 Yersinia pseudotuberculosis IP 32953 yscD; type III secretion protein YP_068489.1 56826 D 273123 CDS YP_068490.1 51593923 2952974 58082..58282 1 NC_006153.2 similar to Y. pestis YPCD1.54; yscE; type III secretion protein 58282 2952974 pYV0081 Yersinia pseudotuberculosis IP 32953 yscE; type III secretion protein YP_068490.1 58082 D 273123 CDS YP_068491.1 51593924 2952975 58283..58546 1 NC_006153.2 identical to Y. pestis YPCD1.55; yscF; type III secretion protein 58546 2952975 pYV0082 Yersinia pseudotuberculosis IP 32953 yscF; type III secretion protein YP_068491.1 58283 D 273123 CDS YP_068492.1 51593925 2952976 58548..58895 1 NC_006153.2 similar to Y. pestis YPCD1.56; yscG; type III secretion protein 58895 2952976 pYV0083 Yersinia pseudotuberculosis IP 32953 yscG; type III secretion protein YP_068492.1 58548 D 273123 CDS YP_068493.1 51593926 2952977 58892..59389 1 NC_006153.2 similar to Y. pestis YPCD1.57; yscH, yopR, lcrP; type III secretion protein 59389 2952977 pYV0084 Yersinia pseudotuberculosis IP 32953 yscH, yopR, lcrP; type III secretion protein YP_068493.1 58892 D 273123 CDS YP_068494.1 51593927 2952978 59390..59737 1 NC_006153.2 identical to Y. pestis YPCD1.58; yscI, lcrO; type III secretion protein 59737 2952978 pYV0085 Yersinia pseudotuberculosis IP 32953 yscI, lcrO; type III secretion protein YP_068494.1 59390 D 273123 CDS YP_068495.1 51593928 2952979 59744..60478 1 NC_006153.2 similar to Y. pestis YPCD1.59; yscJ, ylpB; type III secretion lipoprotein 60478 2952979 pYV0086 Yersinia pseudotuberculosis IP 32953 yscJ, ylpB; type III secretion lipoprotein YP_068495.1 59744 D 273123 CDS YP_068496.1 51593929 2952980 60457..61107 1 NC_006153.2 identical to Y. pestis YPCD1.60; yscK; type III secretion protein 61107 2952980 pYV0087 Yersinia pseudotuberculosis IP 32953 yscK; type III secretion protein YP_068496.1 60457 D 273123 CDS YP_068497.1 51593930 2952981 61086..61718 1 NC_006153.2 similar to Y. pestis YPCD1.61; type III secretion system protein 61718 2952981 pYV0088 Yersinia pseudotuberculosis IP 32953 type III secretion system protein YP_068497.1 61086 D 273123 CDS YP_068498.1 51593931 2952982 61943..62290 1 NC_006153.2 identical to Y. pestis YPCD1.62; yscM, lcrQ; type III secretion regulatory 62290 2952982 pYV0089 Yersinia pseudotuberculosis IP 32953 yscM, lcrQ; type III secretion regulatory YP_068498.1 61943 D 273123 CDS YP_068499.1 51593932 2952983 62838..63104 1 NC_006153.2 identical to Y. pestis YPCD1.63; transposase 63104 2952983 pYV0090 Yersinia pseudotuberculosis IP 32953 transposase YP_068499.1 62838 D 273123 CDS YP_068500.1 51593933 2952984 63140..63562 1 NC_006153.2 similar to Y. pestis YPCD1.64; transposase 63562 2952984 pYV0091 Yersinia pseudotuberculosis IP 32953 transposase YP_068500.1 63140 D 273123 CDS YP_068501.1 51593934 2952985 63559..63960 1 NC_006153.2 similar to Y. pestis YPCD1.65; transposase 63960 2952985 pYV0092 Yersinia pseudotuberculosis IP 32953 transposase YP_068501.1 63559 D 273123 CDS YP_068502.1 51593935 2952986 63966..64145 1 NC_006153.2 similar to Y. pestis YPCD1.66; transposase 64145 2952986 pYV0093 Yersinia pseudotuberculosis IP 32953 transposase YP_068502.1 63966 D 273123 CDS YP_068503.1 51593936 2952987 complement(64366..65772) 1 NC_006153.2 similar to Y. pestis YPCD1.67c; yopH; protein-tyrosine phosphatase Yop effector 65772 2952987 pYV0094 Yersinia pseudotuberculosis IP 32953 yopH; protein-tyrosine phosphatase Yop effector YP_068503.1 64366 R 273123 CDS YP_068504.1 51593937 2952988 66153..66689 1 NC_006153.2 similar to Y. pestis YPCD1.69; transposase 66689 2952988 pYV0095 Yersinia pseudotuberculosis IP 32953 transposase YP_068504.1 66153 D 273123 CDS YP_068505.1 51593938 2952989 complement(66691..66819) 1 NC_006153.2 similar to Y. pestis YPCD1.70c; IS630 family transposase 66819 2952989 pYV0096 Yersinia pseudotuberculosis IP 32953 IS630 family transposase YP_068505.1 66691 R 273123 CDS YP_068506.1 51593939 2952990 complement(66902..66994) 1 NC_006153.2 hypothetical protein 66994 2952990 pYV0097 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068506.1 66902 R 273123 CDS YP_068507.1 51593940 2952991 complement(67275..68141) 1 NC_006153.2 similar to Y. pestis YPCD1.71c; yopP, yopJ; targeted effector protein 68141 2952991 pYV0098 Yersinia pseudotuberculosis IP 32953 yopP, yopJ; targeted effector protein YP_068507.1 67275 R 273123 CDS YP_068508.1 51593941 2952992 complement(68142..68276) 1 NC_006153.2 hypothetical protein 68276 2952992 pYV0099 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068508.1 68142 R 273123 CDS YP_068509.1 51593943 2953023 202..1188 1 NC_006154.1 similar to Q7X3W4 RepA. Erwinia sp. Ejp 556. Score = 326 bits (835), Expect = 3e-88 Identities = 160/324 (49%); plasmid replication protein 1188 rep 2953023 rep Yersinia pseudotuberculosis IP 32953 plasmid replication protein YP_068509.1 202 D 273123 CDS YP_068510.1 51593944 2952993 1316..1624 1 NC_006154.1 hypothetical protein 1624 2952993 pYptb0002 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068510.1 1316 D 273123 CDS YP_068511.1 51593945 2952994 1910..2137 1 NC_006154.1 hypothetical protein 2137 2952994 pYptb0003 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068511.1 1910 D 273123 CDS YP_068512.1 51593946 2953025 2572..3189 1 NC_006154.1 similar to CAD58562 TriA protein. Yersinia enterocolitica. Score = 254 bits (649), Expect = 5e-67 Identities = 128/221 (57%); TriA protein 3189 triA 2953025 triA Yersinia pseudotuberculosis IP 32953 TriA protein YP_068512.1 2572 D 273123 CDS YP_068513.1 51593947 2953026 3194..3487 1 NC_006154.1 similar to CAD58563 TriB protein. Yersinia enterocolitica. Score = 97.4 bits (241), Expect = 3e-20 Identities = 49/94 (52%); TriB protein 3487 triB 2953026 triB Yersinia pseudotuberculosis IP 32953 TriB protein YP_068513.1 3194 D 273123 CDS YP_068514.1 51593948 2953027 3506..6253 1 NC_006154.1 similar to CAD58564 TriC protein. Yersinia enterocolitica. Score = 1244 bits (3218), Expect = 0.0 Identities = 594/915 (64%); TriC protein 6253 triC 2953027 triC Yersinia pseudotuberculosis IP 32953 TriC protein YP_068514.1 3506 D 273123 CDS YP_068515.1 51593949 2953028 6318..7031 1 NC_006154.1 similar to CAD58565 TriD protein. Yersinia enterocolitica. Score = 227 bits (578), Expect = 1e-58 Identities = 124/242 (51%); TriD protein 7031 triD 2953028 triD Yersinia pseudotuberculosis IP 32953 TriD protein YP_068515.1 6318 D 273123 CDS YP_068516.1 51593950 2952995 7097..7348 1 NC_006154.1 Antitoxin that counteracts the effect of the YoeB toxin; antitoxin YefM 7348 2952995 pYptb0008 Yersinia pseudotuberculosis IP 32953 antitoxin YefM YP_068516.1 7097 D 273123 CDS YP_068517.1 51593951 2952996 7345..7599 1 NC_006154.1 similar to P56605 Hypothetical protein yoeB. Escherichia coli, and Shigella flexneri. Score = 154 bits (389), Expect = 3e-37 Identities = 67/84 (79%; hypothetical protein 7599 2952996 pYptb0009 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068517.1 7345 D 273123 CDS YP_068518.1 51593952 2952997 7718..7963 1 NC_006154.1 similar to Q9RPN3 ORF4. Yersinia pestis. Score = 63.2 bits (152), Expect = 8e-10 Identities = 32/74 (43%; hypothetical protein 7963 2952997 pYptb0010 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068518.1 7718 D 273123 CDS YP_068519.1 51593953 2953029 7975..9015 1 NC_006154.1 similar to CAD58566 TriE protein. Yersinia enterocolitica. Score = 295 bits (756), Expect = 5e-79 Identities = 150/332 (45%); TriE protein 9015 triE 2953029 triE Yersinia pseudotuberculosis IP 32953 TriE protein YP_068519.1 7975 D 273123 CDS YP_068520.1 51593954 2953030 9186..9869 1 NC_006154.1 similar to CAD58568 TriG protein. Yersinia enterocolitica. Score = 286 bits (733), Expect = 1e-76 Identities = 138/227 (60%); VirB8; TriG protein 9869 triG 2953030 triG Yersinia pseudotuberculosis IP 32953 TriG protein YP_068520.1 9186 D 273123 CDS YP_068521.1 51593955 2953031 9869..10816 1 NC_006154.1 similar to CAD58569 TriH protein. Yersinia enterocolitica. Score = 357 bits (915), Expect = 2e-97 Identities = 175/292 (59%; TriH protein 10816 triH 2953031 triH Yersinia pseudotuberculosis IP 32953 TriH protein YP_068521.1 9869 D 273123 CDS YP_068522.1 51593956 2953032 10813..12045 1 NC_006154.1 similar to CAD58570 TriI protein. Yersinia enterocolitica. Score = 387 bits (993), Expect = e-106 Identities = 206/415 (49%); TriI protein 12045 triI 2953032 triI Yersinia pseudotuberculosis IP 32953 TriI protein YP_068522.1 10813 D 273123 CDS YP_068523.1 51593957 2953033 12262..13275 1 NC_006154.1 similar to CAD58571 TriJ protein. Yersinia enterocolitica. Score = 507 bits (1305), Expect = e-142 Identities = 241/335 (71%); TriJ protein 13275 triJ 2953033 triJ Yersinia pseudotuberculosis IP 32953 TriJ protein YP_068523.1 12262 D 273123 CDS YP_068524.1 51593958 2952998 13272..13694 1 NC_006154.1 similar to CAD58572 Hypothetical protein ORF29. Yersinia enterocolitica. Score = 136 bits (343), Expect = 4e-32 Identities = 66/134 (49%); hypothetical protein 13694 2952998 pYptb0016 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068524.1 13272 D 273123 CDS YP_068525.1 51593959 2952999 14071..14376 1 NC_006154.1 similar to Q9F518 YggA protein. Escherichia coli. Score = 81.3 bits (199), Expect = 3e-15 Identities = 39/85 (45%); hypothetical protein 14376 2952999 pYptb0017 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068525.1 14071 D 273123 CDS YP_068526.1 51593960 2953000 14519..15769 1 NC_006154.1 similar to Q8ZGB6 Putative exported protein (Putative outer membrane protein). Yersinia pestis. Score = 250 bits (639), Expect = 2e-65 Identities = 158/406 (38%); hypothetical protein 15769 2953000 pYptb0018 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068526.1 14519 D 273123 CDS YP_068527.1 51593961 2953001 15826..16092 1 NC_006154.1 hypothetical protein 16092 2953001 pYptb0019 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068527.1 15826 D 273123 CDS YP_068528.1 51593962 2953002 16111..16524 1 NC_006154.1 similar to CAD58574 DNA binding protein. Yersinia enterocolitica. Score = 97.4 bits (241), Expect = 3e-20 Identities = 55/135 (40%); IPR001801 Histone-like nucleoid-structuring protein H-NS; DNA-binding protein 16524 2953002 pYptb0020 Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_068528.1 16111 D 273123 CDS YP_068529.1 51593963 2953003 16529..16801 1 NC_006154.1 hypothetical protein 16801 2953003 pYptb0021 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068529.1 16529 D 273123 CDS YP_068530.1 51593964 2953004 16823..16996 1 NC_006154.1 hypothetical protein 16996 2953004 pYptb0022 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068530.1 16823 D 273123 CDS YP_068531.1 51593965 2953005 17081..17212 1 NC_006154.1 hypothetical protein 17212 2953005 pYptb0023 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068531.1 17081 D 273123 CDS YP_068532.1 51593966 2953006 17219..17344 1 NC_006154.1 hypothetical protein 17344 2953006 pYptb0024 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068532.1 17219 D 273123 CDS YP_068533.1 51593967 2953007 17341..17463 1 NC_006154.1 hypothetical protein 17463 2953007 pYptb0025 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068533.1 17341 D 273123 CDS YP_068535.1 51593969 2953009 17550..17672 1 NC_006154.1 hypothetical protein 17672 2953009 pYptb0027 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068535.1 17550 D 273123 CDS YP_068536.1 51593970 2953034 18485..20266 1 NC_006154.1 similar to CAD58575 TriK protein. Yersinia enterocolitica. Score = 870 bits (2248), Expect = 0.0 Identities = 430/590 (72%); TriK protein 20266 triK 2953034 triK Yersinia pseudotuberculosis IP 32953 TriK protein YP_068536.1 18485 D 273123 CDS YP_068537.1 51593971 2953035 20274..21014 1 NC_006154.1 similar to CAD58576 TriL protein. Yersinia enterocolitica. Score = 327 bits (837), Expect = 1e-88 Identities = 158/234 (67%); TriL protein 21014 triL 2953035 triL Yersinia pseudotuberculosis IP 32953 TriL protein YP_068537.1 20274 D 273123 CDS YP_068538.1 51593972 2953024 21070..23232 1 NC_006154.1 similar to CAD58573 Topoisomerase. Yersinia enterocolitica. Score = 848 bits (2191), Expect = 0.0 Identities = 443/740 (59%); DNA topoisomerase III family protein 23232 topB 2953024 topB Yersinia pseudotuberculosis IP 32953 DNA topoisomerase III family protein YP_068538.1 21070 D 273123 CDS YP_068539.1 51593973 2953011 23291..23443 1 NC_006154.1 hypothetical protein 23443 2953011 pYptb0032 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068539.1 23291 D 273123 CDS YP_068540.1 51593974 2953012 23475..23636 1 NC_006154.1 hypothetical protein 23636 2953012 pYptb0033 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068540.1 23475 D 273123 CDS YP_068541.1 51593975 2953013 23751..23999 1 NC_006154.1 hypothetical protein 23999 2953013 pYptb0034 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068541.1 23751 D 273123 CDS YP_068542.1 51593976 2953021 complement(24036..25016) 1 NC_006154.1 similar to CAD58578 Antirestriction protein. Yersinia enterocolitica. Score = 457 bits (1176), Expect = e-128 Identities = 227/323 (70%); antirestriction protein 25016 ArdC 2953021 ArdC Yersinia pseudotuberculosis IP 32953 antirestriction protein YP_068542.1 24036 R 273123 CDS YP_068543.1 51593977 2953014 25339..25575 1 NC_006154.1 similar to CAE15300 Hypothetical gene. Photorhabdus luminescens subsp. laumondii TTO1. Score = 68.9 bits (167), Expect = 1e-11 Identities = 36/65 (55%)none; hypothetical protein 25575 2953014 pYptb0036 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068543.1 25339 D 273123 CDS YP_068544.1 51593978 2953022 25627..26253 1 NC_006154.1 similar to AB070224 parA partitioning protein [Serratiamarcescens] Expect = 9e-90 Identities = 172/209 (82%); IPR000707 ATPase, ParA type; plasmid partitioning protein 26253 parA 2953022 parA Yersinia pseudotuberculosis IP 32953 plasmid partitioning protein YP_068544.1 25627 D 273123 CDS YP_068545.1 51593979 2953015 26274..26489 1 NC_006154.1 similar to hypothetical proteins from several shuttle vectors, e.g. AF118810 Shuttle vector pME6010;Expect = 6e-19 Identities = 48/70 (68%); hypothetical protein 26489 2953015 pYptb0038 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068545.1 26274 D 273123 CDS YP_068546.1 51593980 2953016 26513..26806 1 NC_006154.1 hypothetical protein 26806 2953016 pYptb0039 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068546.1 26513 D 273123 CDS YP_068547.1 51593981 2953017 26953..27099 1 NC_006154.1 hypothetical protein 27099 2953017 pYptb0040 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068547.1 26953 D 273123 CDS YP_068548.1 51593982 2953018 27120..27221 1 NC_006154.1 hypothetical protein 27221 2953018 pYptb0041 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068548.1 27120 D 273123 CDS YP_068549.1 51593983 2953019 27236..27382 1 NC_006154.1 hypothetical protein 27382 2953019 pYptb0042 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068549.1 27236 D 273123 CDS YP_068550.1 51593984 2953020 27458..27580 1 NC_006154.1 hypothetical protein 27580 2953020 pYptb0043 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068550.1 27458 D 273123 CDS YP_068551.1 51594360 2953036 complement(270..710) 1 NC_006155.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 710 2953036 YPTB0001 Yersinia pseudotuberculosis IP 32953 flavodoxin YP_068551.1 270 R 273123 CDS YP_068552.1 51594361 2955244 complement(803..1264) 1 NC_006155.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 1264 asnC 2955244 asnC Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator AsnC YP_068552.1 803 R 273123 CDS YP_068553.1 51594362 2955242 1434..2426 1 NC_006155.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 2426 asnA 2955242 asnA Yersinia pseudotuberculosis IP 32953 asparagine synthetase AsnA YP_068553.1 1434 D 273123 CDS YP_068554.1 51594363 2953037 complement(2525..3991) 1 NC_006155.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 3991 yieM 2953037 yieM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068554.1 2525 R 273123 CDS YP_068555.1 51594364 2953038 complement(3995..5533) 1 NC_006155.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 5533 2953038 YPTB0005 Yersinia pseudotuberculosis IP 32953 regulatory ATPase RavA YP_068555.1 3995 R 273123 CDS YP_068556.1 51594365 2955928 5807..7675 1 NC_006155.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 7675 trkD 2955928 trkD Yersinia pseudotuberculosis IP 32953 potassium transport protein Kup YP_068556.1 5807 D 273123 CDS YP_068557.1 51594366 2953039 7880..8299 1 NC_006155.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 8299 2953039 YPTB0007 Yersinia pseudotuberculosis IP 32953 D-ribose pyranase YP_068557.1 7880 D 273123 CDS YP_068558.1 51594367 2953040 8350..9276 1 NC_006155.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 9276 2953040 YPTB0008 Yersinia pseudotuberculosis IP 32953 ribokinase YP_068558.1 8350 D 273123 CDS YP_068559.1 51594368 2953041 9329..9499 1 NC_006155.1 not present in pestis; hypothetical protein 9499 2953041 YPTB0009 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068559.1 9329 D 273123 CDS YP_068560.1 51594369 2953042 complement(9496..10920) 1 NC_006155.1 similar to Yersinia pestis YPO0009 membrane transport protein (100% evalue=0); Salmonella typhimurium STM3887 yieO; MFS family tranport protein (1st mdule) (74% evalue=0); MFS multidrug:H+ antiporter 10920 2953042 YPTB0010 Yersinia pseudotuberculosis IP 32953 MFS multidrug:H+ antiporter YP_068560.1 9496 R 273123 CDS YP_068561.1 51594370 2953043 complement(11000..11689) 1 NC_006155.1 similar to Yersinia pestis YPO0010 GntR-famly transcriptional regulator (100% evalue=1.E-128); Escherichia coli Z5258 yieP; orf; Unknown function (67.6% evalue=5.E-85); GntR family transcriptional regulator 11689 2953043 YPTB0011 Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_068561.1 11000 R 273123 CDS YP_068562.1 51594371 2953044 17956..19143 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (99.7% evalue=0); transposase 19143 2953044 YPTB0012 Yersinia pseudotuberculosis IP 32953 transposase YP_068562.1 17956 D 273123 CDS YP_068563.1 51594372 2956059 complement(19223..19753) 1 NC_006155.1 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein MobB 19753 mobB 2956059 mobB Yersinia pseudotuberculosis IP 32953 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_068563.1 19223 R 273123 CDS YP_068564.1 51594373 2953045 20495..20764 1 NC_006155.1 similar to Yersinia pestis YPO0013a conserved hypothetical protein (100% evalue=3.E-46); Escherichia coli b3858 yihD; hypothetical 10.3 kD protein in mobA-dsbA intergenic region (O89) (76.4% evalue=2.E-35); hypothetical protein 20764 2953045 YPTB0015 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068564.1 20495 D 273123 CDS YP_068565.1 51594374 2953046 20855..21841 1 NC_006155.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 21841 2953046 YPTB0016 Yersinia pseudotuberculosis IP 32953 serine/threonine protein kinase YP_068565.1 20855 D 273123 CDS YP_068566.1 51594375 2955486 21869..22492 1 NC_006155.1 similar to Yersinia pestis YPO0015 dsbA; secreted thiol:disulfide interchange protein DsbA (100% evalue=1.E-116); Salmonella typhimurium STM3997 dsbA; periplasmic protein disulfide isomerase I (75.8% evalue=1.E-88); protein disulfide isomerase 22492 dsbA 2955486 dsbA Yersinia pseudotuberculosis IP 32953 protein disulfide isomerase YP_068566.1 21869 D 273123 CDS YP_068567.1 51594376 2956294 22983..25781 1 NC_006155.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 25781 polA 2956294 polA Yersinia pseudotuberculosis IP 32953 DNA polymerase I YP_068567.1 22983 D 273123 CDS YP_068568.1 51594377 2953047 complement(26189..26839) 1 NC_006155.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 26839 engB 2953047 engB Yersinia pseudotuberculosis IP 32953 ribosome biogenesis GTP-binding protein YsxC YP_068568.1 26189 R 273123 CDS YP_068569.1 51594378 2953048 27604..28170 1 NC_006155.1 similar to Yersinia pestis YPO0020 conserved hypothetical protein (100% evalue=1.E-103); Salmonella typhi STY3878 yihI; conserved hypothetical protein (51.9% evalue=1.E-43); hypothetical protein 28170 2953048 YPTB0020 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068569.1 27604 D 273123 CDS YP_068570.1 51594379 2955782 28357..29730 1 NC_006155.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 29730 hemN 2955782 hemN Yersinia pseudotuberculosis IP 32953 coproporphyrinogen III oxidase YP_068570.1 28357 D 273123 CDS YP_068571.1 51594380 2956164 complement(29784..31196) 1 NC_006155.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 31196 glnG 2956164 glnG Yersinia pseudotuberculosis IP 32953 nitrogen regulation protein NR(I) YP_068571.1 29784 R 273123 CDS YP_068572.1 51594381 2956163 complement(31204..32253) 1 NC_006155.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 32253 glnL 2956163 glnL Yersinia pseudotuberculosis IP 32953 nitrogen regulation protein NR(II) YP_068572.1 31204 R 273123 CDS YP_068573.1 51594382 2955695 complement(32506..33915) 1 NC_006155.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 33915 glnA 2955695 glnA Yersinia pseudotuberculosis IP 32953 glutamine synthetase YP_068573.1 32506 R 273123 CDS YP_068574.1 51594383 2955292 34478..36301 1 NC_006155.1 similar to Yersinia pestis YPO0026 bipA, typA; GTPase (99.8% evalue=0); Salmonella typhimurium STM4009 typA; GTP-binding elongation factor family protein (89.1% evalue=0); GTPase 36301 bipA 2955292 bipA Yersinia pseudotuberculosis IP 32953 GTPase YP_068574.1 34478 D 273123 CDS YP_068575.1 51594384 2953049 36623..37213 1 NC_006155.1 similar to Yersinia pestis YPO0027 conserved hypothetical protein (100% evalue=1.E-110); Salmonella typhi STY3852 yihX; haloacid dehalogenase-like hydrolase (70.2% evalue=6.E-75); phosphatase 37213 2953049 YPTB0026 Yersinia pseudotuberculosis IP 32953 phosphatase YP_068575.1 36623 D 273123 CDS YP_068576.1 51594385 2956403 37310..38194 1 NC_006155.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 38194 rbn 2956403 rbn Yersinia pseudotuberculosis IP 32953 ribonuclease BN YP_068576.1 37310 D 273123 CDS YP_068577.1 51594386 2953050 38201..38638 1 NC_006155.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 38638 2953050 YPTB0028 Yersinia pseudotuberculosis IP 32953 D-tyrosyl-tRNA(Tyr) deacylase YP_068577.1 38201 D 273123 CDS YP_068578.1 51594387 2953051 38824..39747 1 NC_006155.1 similar to Yersinia pestis YPO0032 conserved membrane protein (100% evalue=1.E-178); Escherichia coli b3888 yiiD; hypothetical 37.1 kD protein in rbn-fdhE intergenic region (O329) (83.8% evalue=1.E-149); hypothetical protein 39747 2953051 YPTB0029 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068578.1 38824 D 273123 CDS YP_068579.1 51594388 2953052 complement(39882..41591) 1 NC_006155.1 similar to Yersinia pestis YPO0033 possible exported protein (100% evalue=0); Escherichia coli b3655 yicH; hypothetical 62.3 kD protein in gltS-selC intergenic region (49% evalue=1.E-164); hypothetical protein 41591 2953052 YPTB0030 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068579.1 39882 R 273123 CDS YP_068580.1 51594389 2953053 complement(41738..43123) 1 NC_006155.1 similar to Yersinia pestis YPO0034 membrane permease (99.3% evalue=0); Escherichia coli ECs4530 transport protein (84.4% evalue=0); NCS2 family xanthine/uracil:H+ symporter 43123 2953053 YPTB0031 Yersinia pseudotuberculosis IP 32953 NCS2 family xanthine/uracil:H+ symporter YP_068580.1 41738 R 273123 CDS YP_068581.1 51594390 2955724 43361..44575 1 NC_006155.1 similar to Yersinia pestis YPO0035 gltS, gltC; sodium/glutamate symport carrier protein (100% evalue=0); Escherichia coli ECs4529 glutamate transport protein (82.4% evalue=0); sodium/glutamate symport carrier protein 44575 gltS 2955724 gltS Yersinia pseudotuberculosis IP 32953 sodium/glutamate symport carrier protein YP_068581.1 43361 D 273123 CDS YP_068582.1 51594391 2956417 complement(44941..47022) 1 NC_006155.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 47022 recG 2956417 recG Yersinia pseudotuberculosis IP 32953 ATP-dependent DNA helicase RecG YP_068582.1 44941 R 273123 CDS YP_068583.1 51594392 2956737 complement(47023..47715) 1 NC_006155.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 47715 trmH 2956737 trmH Yersinia pseudotuberculosis IP 32953 tRNA guanosine-2'-O-methyltransferase YP_068583.1 47023 R 273123 CDS YP_068584.1 51594393 2956629 complement(47721..49829) 1 NC_006155.1 similar to Yersinia pestis YPO0038 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase (99.8% evalue=0); Escherichia coli JW3625 spoT; Guanosine 3',5'-bis(diphosphate) 3'-pyrophosphatase (91.4% evalue=0); bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 49829 spoT 2956629 spoT Yersinia pseudotuberculosis IP 32953 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_068584.1 47721 R 273123 CDS YP_068585.1 51594394 2956528 complement(49849..50124) 1 NC_006155.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 50124 rpoZ 2956528 rpoZ Yersinia pseudotuberculosis IP 32953 DNA-directed RNA polymerase subunit omega YP_068585.1 49849 R 273123 CDS YP_068586.1 51594395 2955731 complement(50179..50802) 1 NC_006155.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 50802 gmk 2955731 gmk Yersinia pseudotuberculosis IP 32953 guanylate kinase YP_068586.1 50179 R 273123 CDS YP_068587.1 51594396 2953054 51203..52906 1 NC_006155.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 52906 ligB 2953054 ligB Yersinia pseudotuberculosis IP 32953 NAD-dependent DNA ligase LigB YP_068587.1 51203 D 273123 CDS YP_068588.1 51594397 2953055 complement(52926..53543) 1 NC_006155.1 similar to Yersinia pestis YPO0042 membrane protein (99.4% evalue=2.E-98); Escherichia coli b3646 yicG; hypothetical 22.0 kD protein in rph-gmk intergenic region precursor (73.6% evalue=2.E-82); hypothetical protein 53543 2953055 YPTB0039 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068588.1 52926 R 273123 CDS YP_068589.1 51594398 2953056 complement(54064..54927) 1 NC_006155.1 similar to Yersinia pestis YPO0043 conserved hypothetical protein (100% evalue=1.E-157); Salmonella typhi STY4059 conserved hypothetical protein (87.8% evalue=1.E-140); hypothetical protein 54927 2953056 YPTB0040 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068589.1 54064 R 273123 CDS YP_068590.1 51594399 2956483 55054..55770 1 NC_006155.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 55770 rph 2956483 rph Yersinia pseudotuberculosis IP 32953 ribonuclease PH YP_068590.1 55054 D 273123 CDS YP_068591.1 51594400 2956387 55937..56584 1 NC_006155.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 56584 pyrE 2956387 pyrE Yersinia pseudotuberculosis IP 32953 orotate phosphoribosyltransferase YP_068591.1 55937 D 273123 CDS YP_068592.1 51594401 2956841 complement(56719..57315) 1 NC_006155.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 57315 slmA 2956841 slmA Yersinia pseudotuberculosis IP 32953 nucleoid occlusion protein YP_068592.1 56719 R 273123 CDS YP_068593.1 51594402 2955490 complement(57437..57892) 1 NC_006155.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 57892 dut 2955490 dut Yersinia pseudotuberculosis IP 32953 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_068593.1 57437 R 273123 CDS YP_068594.2 161760595 2955455 complement(57873..59087) 1 NC_006155.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 59087 dfp 2955455 dfp Yersinia pseudotuberculosis IP 32953 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_068594.2 57873 R 273123 CDS YP_068595.1 51594404 2956398 59284..59952 1 NC_006155.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 59952 radC 2956398 radC Yersinia pseudotuberculosis IP 32953 DNA repair protein RadC YP_068595.1 59284 D 273123 CDS YP_068596.1 51594405 2956511 60215..60451 1 NC_006155.1 required for 70S ribosome assembly; 50S ribosomal protein L28 60451 rpmB 2956511 rpmB Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L28 YP_068596.1 60215 D 273123 CDS YP_068597.1 51594406 2956516 60463..60630 1 NC_006155.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 60630 rpmG 2956516 rpmG Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L33 YP_068597.1 60463 D 273123 CDS YP_068598.1 51594407 2956108 60713..61522 1 NC_006155.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 61522 mutM 2956108 mutM Yersinia pseudotuberculosis IP 32953 formamidopyrimidine-DNA glycosylase YP_068598.1 60713 D 273123 CDS YP_068599.1 51594408 2955343 complement(61528..62007) 1 NC_006155.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 62007 coaD 2955343 coaD Yersinia pseudotuberculosis IP 32953 phosphopantetheine adenylyltransferase YP_068599.1 61528 R 273123 CDS YP_068600.1 51594409 2955921 complement(62004..62786) 1 NC_006155.1 similar to Yersinia pestis YPO0054 kdtX, waaE; lipopolysaccharide core biosynthesis glycosyl transferase (100% evalue=1.E-149); Vibrio cholerae VC0224 lipopolysaccharide biosynthesis glycosyltransferase, (52.2% evalue=6.E-66); lipopolysaccharide core biosynthesis glycosyl transferase 62786 kdtX 2955921 kdtX Yersinia pseudotuberculosis IP 32953 lipopolysaccharide core biosynthesis glycosyl transferase YP_068600.1 62004 R 273123 CDS YP_068601.1 51594410 2955920 complement(62787..64064) 1 NC_006155.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 64064 kdtA 2955920 kdtA Yersinia pseudotuberculosis IP 32953 3-deoxy-D-manno-octulosonic-acid transferase YP_068601.1 62787 R 273123 CDS YP_068602.1 51594411 2956426 complement(64484..65449) 1 NC_006155.1 similar to Yersinia pestis YPO0056 rfaC, waaC, rfa-2; lipopolysaccharide heptosyltransferase-1 (100% evalue=0); Escherichia coli b3621 rfaC, rfa-2; lipopolysaccharide heptosyltransferase-1 (68.3% evalue=1.E-127); ADP-heptose--LPS heptosyltransferase 65449 rfaC 2956426 rfaC Yersinia pseudotuberculosis IP 32953 ADP-heptose--LPS heptosyltransferase YP_068602.1 64484 R 273123 CDS YP_068603.1 51594412 2956429 complement(65449..66513) 1 NC_006155.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 66513 rfaF 2956429 rfaF Yersinia pseudotuberculosis IP 32953 ADP-heptose--LPS heptosyltransferase YP_068603.1 65449 R 273123 CDS YP_068604.1 51594413 2956427 complement(66544..67476) 1 NC_006155.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 67476 rfaD 2956427 rfaD Yersinia pseudotuberculosis IP 32953 ADP-L-glycero-D-manno-heptose-6-epimerase YP_068604.1 66544 R 273123 CDS YP_068605.1 51594414 2955909 67722..68933 1 NC_006155.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 68933 kbl 2955909 kbl Yersinia pseudotuberculosis IP 32953 2-amino-3-ketobutyrate CoA ligase YP_068605.1 67722 D 273123 CDS YP_068606.1 51594415 2956673 68943..69968 1 NC_006155.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 69968 tdh 2956673 tdh Yersinia pseudotuberculosis IP 32953 L-threonine 3-dehydrogenase YP_068606.1 68943 D 273123 CDS YP_068607.1 51594416 2957073 complement(70106..71116) 1 NC_006155.1 similar to Salmonella typhi STY4089 exported protein (63.6% evalue=1.E-106); Salmonella typhimurium STM3706 yigQ; periplasmic protein (64% evalue=1.E-105); hypothetical protein 71116 yibQ 2957073 yibQ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068607.1 70106 R 273123 CDS YP_068608.2 161760594 2953057 complement(71140..72510) 1 NC_006155.1 similar to Yersinia pestis YPO0063 membrane protein (99.5% evalue=0); Salmonella typhimurium STM3705 yibP; paral membrane protein (65.7% evalue=1.E-150); hypothetical protein 72510 2953057 YPTB0059 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068608.2 71140 R 273123 CDS YP_068609.1 51594418 2953058 complement(72520..74067) 1 NC_006155.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 74067 2953058 YPTB0060 Yersinia pseudotuberculosis IP 32953 phosphoglyceromutase YP_068609.1 72520 R 273123 CDS YP_068610.1 51594419 2953059 74465..74899 1 NC_006155.1 similar to Yersinia pestis YPO0065 membrane protein (100% evalue=1.E-76); Salmonella typhi STY4092 secreted protein (67.8% evalue=2.E-52); hypothetical protein 74899 2953059 YPTB0061 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068610.1 74465 D 273123 CDS YP_068611.1 51594420 2955749 75018..75266 1 NC_006155.1 similar to Yersinia pestis YPO0066 grxC; glutaredoxin (100% evalue=3.E-43); Salmonella typhi STY4093 grxC; glutaredoxin 3 (85.3% evalue=5.E-36); glutaredoxin 3 75266 grxC 2955749 grxC Yersinia pseudotuberculosis IP 32953 glutaredoxin 3 YP_068611.1 75018 D 273123 CDS YP_068612.1 51594421 2956582 75354..75830 1 NC_006155.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 75830 secB 2956582 secB Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecB YP_068612.1 75354 D 273123 CDS YP_068613.1 51594422 2955741 75830..76849 1 NC_006155.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 76849 gpsA 2955741 gpsA Yersinia pseudotuberculosis IP 32953 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_068613.1 75830 D 273123 CDS YP_068614.1 51594423 2953060 76909..77049 1 NC_006155.1 similar to Yersinia pestis YPO0069 hypothetical protein.; hypothetical protein 77049 2953060 YPTB0065 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068614.1 76909 D 273123 CDS YP_068615.1 51594424 2955402 77115..77936 1 NC_006155.1 catalyzes the O-acetylation of serine; serine acetyltransferase 77936 cysE 2955402 cysE Yersinia pseudotuberculosis IP 32953 serine acetyltransferase YP_068615.1 77115 D 273123 CDS YP_068616.1 51594425 2953061 complement(78059..78547) 1 NC_006155.1 similar to Yersinia pestis YPO0071 methyltransferase (99.3% evalue=1.E-90); Escherichia coli JW3581 yibK; Hypothetical tRNA/rRNA methyltransferase (79.6% evalue=2.E-71); methyltransferase 78547 2953061 YPTB0067 Yersinia pseudotuberculosis IP 32953 methyltransferase YP_068616.1 78059 R 273123 CDS YP_068617.1 51594426 2953062 78736..79800 1 NC_006155.1 similar to Yersinia pestis YPO0072 bifunctional regulatory protein/DNA repair protein (98.5% evalue=0); Ralstonia solanacearum RS00768 ada, RSc2570; methylated-DNA-protein-cysteine methyltransferase O-6-methylguanine-DNA transcription regulator (64.8% evalue=1.E-127); bifunctional regulatory protein/DNA repair protein 79800 2953062 YPTB0068 Yersinia pseudotuberculosis IP 32953 bifunctional regulatory protein/DNA repair protein YP_068617.1 78736 D 273123 CDS YP_068618.1 51594427 2955353 complement(79868..81244) 1 NC_006155.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 81244 cpxA 2955353 cpxA Yersinia pseudotuberculosis IP 32953 two-component sensor protein YP_068618.1 79868 R 273123 CDS YP_068619.1 51594428 2955355 complement(81241..81939) 1 NC_006155.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 81939 cpxR 2955355 cpxR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator CpxR YP_068619.1 81241 R 273123 CDS YP_068620.1 51594429 2955354 82113..82601 1 NC_006155.1 repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; periplasmic stress adaptor protein CpxP 82601 cpxP 2955354 cpxP Yersinia pseudotuberculosis IP 32953 periplasmic stress adaptor protein CpxP YP_068620.1 82113 D 273123 CDS YP_068621.1 51594430 2953063 83279..84238 1 NC_006155.1 similar to Yersinia pestis YPO0076 conserved hypothetical protein (99.6% evalue=0); Salmonella typhimurium PSLT051 samB; cytoplasmic protein (62% evalue=1.E-108); hypothetical protein 84238 2953063 YPTB0072 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068621.1 83279 D 273123 CDS YP_068622.1 51594431 2953064 84800..85702 1 NC_006155.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 85702 fieF 2953064 fieF Yersinia pseudotuberculosis IP 32953 ferrous iron efflux protein F YP_068622.1 84800 D 273123 CDS YP_068623.1 51594432 2956238 85920..86903 1 NC_006155.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 86903 pfkA 2956238 pfkA Yersinia pseudotuberculosis IP 32953 6-phosphofructokinase YP_068623.1 85920 D 273123 CDS YP_068624.1 51594433 2956574 87124..88113 1 NC_006155.1 similar to Yersinia pestis YPO0079 sbp1; exported sulfate-binding protein (98.7% evalue=0); Escherichia coli JW3888 sbp; Periplasmic sulphate binding protein (83.5% evalue=1.E-162); sulfate transporter subunit 88113 sbp1 2956574 sbp1 Yersinia pseudotuberculosis IP 32953 sulfate transporter subunit YP_068624.1 87124 D 273123 CDS YP_068625.1 51594434 2953065 complement(88363..89139) 1 NC_006155.1 similar to Yersinia pestis YPO0080 hypothetical protein (99.6% evalue=1.E-137); Bacillus subtilis BG14094 yvgL, yvsD; molybdate transport system substrate-binding protein (21.9% evalue=9.E-09); molybdate ABC transporter periplasmic-binding protein 89139 2953065 YPTB0076 Yersinia pseudotuberculosis IP 32953 molybdate ABC transporter periplasmic-binding protein YP_068625.1 88363 R 273123 CDS YP_068626.1 51594435 2953066 complement(89257..90684) 1 NC_006155.1 similar to Yersinia pestis YPO0081 membrane transport protein (100% evalue=0); Escherichia coli ECs0798 membrane pump protein (52.2% evalue=1.E-142); DASS family 2-oxoglutarate/malate:Na+ antiporter 90684 2953066 YPTB0077 Yersinia pseudotuberculosis IP 32953 DASS family 2-oxoglutarate/malate:Na+ antiporter YP_068626.1 89257 R 273123 CDS YP_068627.1 51594436 2953067 complement(90750..91463) 1 NC_006155.1 similar to Yersinia pestis YPO0082 possible transferase (100% evalue=1.E-131); Sinorhizobium meliloti SMc00502 conserved hypothetical protein (58.1% evalue=3.E-70); hypothetical protein 91463 2953067 YPTB0078 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068627.1 90750 R 273123 CDS YP_068628.1 51594437 2953068 complement(91460..92197) 1 NC_006155.1 similar to Yersinia pestis YPO0083 hypothetical protein (100% evalue=1.E-142); Sinorhizobium meliloti SMc00503 conserved hypothetical protein (65.4% evalue=3.E-89); hypothetical protein 92197 2953068 YPTB0079 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068628.1 91460 R 273123 CDS YP_068629.1 51594438 2953069 92334..93569 1 NC_006155.1 similar to Yersinia pestis YPO0084 possible transcriptional regulator (99.1% evalue=0); Sinorhizobium meliloti SMc00504 transcription regulator protein (26.3% evalue=9.E-34); transcriptional regulator 93569 2953069 YPTB0080 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_068629.1 92334 D 273123 CDS YP_068630.1 51594439 2956726 complement(93800..94567) 1 NC_006155.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 94567 tpiA 2956726 tpiA Yersinia pseudotuberculosis IP 32953 triosephosphate isomerase YP_068630.1 93800 R 273123 CDS YP_068631.1 51594440 2953070 complement(94696..95331) 1 NC_006155.1 similar to Yersinia pestis YPO0086 exported protein (99.5% evalue=1.E-114); Salmonella typhi STY3788 yiiQ; conserved hypothetical protein (57.2% evalue=2.E-54); hypothetical protein 95331 2953070 YPTB0082 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068631.1 94696 R 273123 CDS YP_068632.1 51594441 2953071 95479..95913 1 NC_006155.1 similar to Yersinia pestis YPO0087 conserved membrane protein (100% evalue=2.E-84); Escherichia coli b3921 yiiR; hypothetical 16.5 kD protein in tpiA-fpr intergenic region (O146) (66.6% evalue=3.E-55); hypothetical protein 95913 2953071 YPTB0083 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068632.1 95479 D 273123 CDS YP_068633.1 51594442 2955637 complement(96254..97000) 1 NC_006155.1 similar to Yersinia pestis YPO0088 fpr, mvrA; ferredoxin--NADP reductase (100% evalue=1.E-141); Salmonella typhi STY3786 fpr; ferredoxin--NADP reductase (77% evalue=1.E-110); ferredoxin-NADP reductase 97000 fpr 2955637 fpr Yersinia pseudotuberculosis IP 32953 ferredoxin-NADP reductase YP_068633.1 96254 R 273123 CDS YP_068634.1 51594443 2955715 complement(97155..98165) 1 NC_006155.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 98165 glpX 2955715 glpX Yersinia pseudotuberculosis IP 32953 fructose 1,6-bisphosphatase II YP_068634.1 97155 R 273123 CDS YP_068635.1 51594444 2955712 complement(98418..99941) 1 NC_006155.1 similar to Escherichia coli b3926 glpK; glycerol kinase (84.6% evalue=0); Escherichia coli Z5471 glpK; glycerol kinase (84.4% evalue=0); glycerol kinase 99941 glpK 2955712 glpK Yersinia pseudotuberculosis IP 32953 glycerol kinase YP_068635.1 98418 R 273123 CDS YP_068636.1 51594445 2955710 complement(100118..100966) 1 NC_006155.1 similar to Yersinia pestis YPO0091 glpF; glycerol uptake facilitator protein (100% evalue=1.E-160); Escherichia coli ECs4852 glycerol facilitator protein (82.6% evalue=1.E-136); MIP family glycerol uptake facilitator protein GlpF 100966 glpF 2955710 glpF Yersinia pseudotuberculosis IP 32953 MIP family glycerol uptake facilitator protein GlpF YP_068636.1 100118 R 273123 CDS YP_068637.1 51594446 2953072 complement(100976..101215) 1 NC_006155.1 similar to Yersinia pestis YPO0092 hypothetical protein; hypothetical protein 101215 2953072 YPTB0088 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068637.1 100976 R 273123 CDS YP_068638.1 51594447 2953073 101610..101849 1 NC_006155.1 similar to Yersinia pestis YPO0093 conserved hypothetical protein (100% evalue=1.E-37); Salmonella typhimurium STM4088 yiiU; cytoplasmic protein (77.2% evalue=4.E-27); hypothetical protein 101849 2953073 YPTB0089 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068638.1 101610 D 273123 CDS YP_068639.1 51594448 2953074 complement(102190..104304) 1 NC_006155.1 similar to Xylella fastidiosa XF1220 colicin V secretion ABC transporter ATP-binding protein (43.6% evalue=1.E-163); Pseudomonas aeruginosa PA4143 probable toxin transporter (44.9% evalue=1.E-172); ABC transporter permease/ATP-binding protein 104304 2953074 YPTB0090 Yersinia pseudotuberculosis IP 32953 ABC transporter permease/ATP-binding protein YP_068639.1 102190 R 273123 CDS YP_068640.1 51594449 2953075 complement(104297..105589) 1 NC_006155.1 similar to Yersinia pestis YPO0099 exported protein (99.7% evalue=0); Pseudomonas aeruginosa PA4142 probable secretion protein (25.6% evalue=4.E-41); HlyD family (ABC transporter associated) multidrug efflux pump 105589 2953075 YPTB0091 Yersinia pseudotuberculosis IP 32953 HlyD family (ABC transporter associated) multidrug efflux pump YP_068640.1 104297 R 273123 CDS YP_068641.1 51594450 2953076 105802..106041 1 NC_006155.1 similar to Yersinia pestis YPO0100 hypothetical protein (98.7% evalue=4.E-37); hypothetical protein 106041 2953076 YPTB0092 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068641.1 105802 D 273123 CDS YP_068642.1 51594451 2953077 106216..106365 1 NC_006155.1 similar to Yersinia pestis YPO0101 hypothetical protein. 100% identical; hypothetical protein 106365 2953077 YPTB0093 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068642.1 106216 D 273123 CDS YP_068643.1 51594452 2953078 106671..107255 1 NC_006155.1 similar to Yersinia pestis YPO0102 exported protein (100% evalue=1.E-106); hypothetical protein 107255 2953078 YPTB0094 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068643.1 106671 D 273123 CDS YP_068644.1 51594453 2956017 complement(107372..107857) 1 NC_006155.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 107857 menG 2956017 menG Yersinia pseudotuberculosis IP 32953 ribonuclease activity regulator protein RraA YP_068644.1 107372 R 273123 CDS YP_068645.1 51594454 2956011 complement(107999..108916) 1 NC_006155.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 108916 menA 2956011 menA Yersinia pseudotuberculosis IP 32953 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_068645.1 107999 R 273123 CDS YP_068646.1 51594455 2955842 complement(109151..110482) 1 NC_006155.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 110482 hslU 2955842 hslU Yersinia pseudotuberculosis IP 32953 ATP-dependent protease ATP-binding subunit HslU YP_068646.1 109151 R 273123 CDS YP_068647.1 51594456 2955843 complement(110553..111077) 1 NC_006155.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 111077 hslV 2955843 hslV Yersinia pseudotuberculosis IP 32953 ATP-dependent protease peptidase subunit YP_068647.1 110553 R 273123 CDS YP_068648.1 51594457 2955658 complement(111177..112022) 1 NC_006155.1 similar to Yersinia pestis YPO0107 ftsN, msgA; cell division protein (99.6% evalue=1.E-160); Salmonella typhimurium STM4093 ftsN; essential cell division protein (51% evalue=2.E-77); cell division protein FtsN 112022 ftsN 2955658 ftsN Yersinia pseudotuberculosis IP 32953 cell division protein FtsN YP_068648.1 111177 R 273123 CDS YP_068649.2 161760593 2955418 complement(112088..113116) 1 NC_006155.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 113116 cytR 2955418 cytR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator CytR YP_068649.2 112088 R 273123 CDS YP_068650.1 51594459 2956318 complement(113469..115667) 1 NC_006155.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 115667 priA 2956318 priA Yersinia pseudotuberculosis IP 32953 primosome assembly protein PriA YP_068650.1 113469 R 273123 CDS YP_068651.1 51594460 2956514 115920..116135 1 NC_006155.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 116135 rpmE 2956514 rpmE Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L31 YP_068651.1 115920 D 273123 CDS YP_068652.1 51594461 2953079 complement(116677..117132) 1 NC_006155.1 similar to Yersinia pestis YPO0112 conserved hypothetical protein (100% evalue=2.E-81); Ralstonia solanacearum RS01011 hypothetical transmembrane protein (57.5% evalue=2.E-45); hypothetical protein 117132 2953079 YPTB0103 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068652.1 116677 R 273123 CDS YP_068653.1 51594462 2956027 complement(117481..117798) 1 NC_006155.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 117798 metJ 2956027 metJ Yersinia pseudotuberculosis IP 32953 transcriptional repressor protein MetJ YP_068653.1 117481 R 273123 CDS YP_068654.1 51594463 2956020 118176..119336 1 NC_006155.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 119336 metB 2956020 metB Yersinia pseudotuberculosis IP 32953 cystathionine gamma-synthase YP_068654.1 118176 D 273123 CDS YP_068655.1 51594464 2956029 119339..121774 1 NC_006155.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 121774 metL 2956029 metL Yersinia pseudotuberculosis IP 32953 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_068655.1 119339 D 273123 CDS YP_068656.1 51594465 2956024 122007..122891 1 NC_006155.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 122891 metF 2956024 metF Yersinia pseudotuberculosis IP 32953 5,10-methylenetetrahydrofolate reductase YP_068656.1 122007 D 273123 CDS YP_068657.1 51594466 2956304 complement(123720..126356) 1 NC_006155.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 126356 ppc 2956304 ppc Yersinia pseudotuberculosis IP 32953 phosphoenolpyruvate carboxylase YP_068657.1 123720 R 273123 CDS YP_068658.1 51594467 2955215 complement(126730..127899) 1 NC_006155.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 127899 argE 2955215 argE Yersinia pseudotuberculosis IP 32953 acetylornithine deacetylase YP_068658.1 126730 R 273123 CDS YP_068659.1 51594468 2955214 128144..129148 1 NC_006155.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 129148 argC 2955214 argC Yersinia pseudotuberculosis IP 32953 N-acetyl-gamma-glutamyl-phosphate reductase YP_068659.1 128144 D 273123 CDS YP_068660.1 51594469 2955213 129331..130104 1 NC_006155.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 130104 argB 2955213 argB Yersinia pseudotuberculosis IP 32953 acetylglutamate kinase YP_068660.1 129331 D 273123 CDS YP_068661.1 51594470 2955217 130271..131644 1 NC_006155.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 131644 argH 2955217 argH Yersinia pseudotuberculosis IP 32953 argininosuccinate lyase YP_068661.1 130271 D 273123 CDS YP_068662.1 51594471 2953080 132243..134735 1 NC_006155.1 similar to Yersinia pestis YPO3923 TonB dependent receptor protein (99.5% evalue=0); Pseudomonas aeruginosa PA3408 hasR; heme acquisition protein HasR (45.7% evalue=0); TonB dependent receptor protein 134735 2953080 YPTB0113 Yersinia pseudotuberculosis IP 32953 TonB dependent receptor protein YP_068662.1 132243 D 273123 CDS YP_068663.1 51594472 2955768 134963..135580 1 NC_006155.1 similar to Yersinia pestis YPO3922 hemophore HasA (98.5% evalue=1.E-115); Pseudomonas aeruginosa PA3407 hasAp; heme acquisition protein HasAp (30.3% evalue=9.E-18); heme acquisition hemophore HasA 135580 HasA 2955768 HasA Yersinia pseudotuberculosis IP 32953 heme acquisition hemophore HasA YP_068663.1 134963 D 273123 CDS YP_068664.1 51594473 2953081 135746..137554 1 NC_006155.1 similar to Yersinia pestis YPO3920 ABC transporter protein (99.6% evalue=0); Pseudomonas aeruginosa PA3406 hasD; transport protein HasD (58.4% evalue=0); ABC transporter permease/ATP-binding protein 137554 2953081 YPTB0115 Yersinia pseudotuberculosis IP 32953 ABC transporter permease/ATP-binding protein YP_068664.1 135746 D 273123 CDS YP_068665.1 51594474 2953082 137630..138958 1 NC_006155.1 similar to Yersinia pestis YPO3919 HlyD family secretion protein (98.8% evalue=0); Pseudomonas aeruginosa PA3405 hasE; metalloprotease secretion protein (43.6% evalue=1.E-93); HlyD family secretion protein 138958 2953082 YPTB0116 Yersinia pseudotuberculosis IP 32953 HlyD family secretion protein YP_068665.1 137630 D 273123 CDS YP_068666.1 51594475 2953083 139023..139826 1 NC_006155.1 similar to Yersinia pestis YPO3918 membrane protein (98.8% evalue=1.E-147); C. jejuni Cj0181 tonB1; possible tonB transport protein (34.8% evalue=3.E-18); tonB protein 139826 2953083 YPTB0117 Yersinia pseudotuberculosis IP 32953 tonB protein YP_068666.1 139023 D 273123 CDS YP_068667.1 51594476 2953084 complement(139942..141405) 1 NC_006155.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 141405 2953084 YPTB0118 Yersinia pseudotuberculosis IP 32953 dihydrolipoamide dehydrogenase YP_068667.1 139942 R 273123 CDS YP_068668.1 51594477 2953085 complement(141499..142230) 1 NC_006155.1 similar to Yersinia pestis YPO3916 peroxiredoxin/glutaredoxin family protein (100% evalue=1.E-141); Vibrio cholerae VC2637 peroxiredoxin family protein/glutaredoxin (81.3% evalue=1.E-117); peroxiredoxin/glutaredoxin family protein 142230 2953085 YPTB0119 Yersinia pseudotuberculosis IP 32953 peroxiredoxin/glutaredoxin family protein YP_068668.1 141499 R 273123 CDS YP_068669.1 51594478 2956202 142377..143294 1 NC_006155.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 143294 oxyR 2956202 oxyR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator OxyR YP_068669.1 142377 D 273123 CDS YP_068670.1 51594479 2956644 complement(143277..144677) 1 NC_006155.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 144677 sthA 2956644 sthA Yersinia pseudotuberculosis IP 32953 soluble pyridine nucleotide transhydrogenase YP_068670.1 143277 R 273123 CDS YP_068671.1 51594480 2956734 144883..145530 1 NC_006155.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 145530 trmA 2956734 trmA Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor FabR YP_068671.1 144883 D 273123 CDS YP_068672.1 51594481 2957079 145543..145950 1 NC_006155.1 similar to Yersinia pestis YPO3912 yijD; membrane protein (100% evalue=3.E-71); Salmonella typhimurium STM4128 yijD; inner membrane protein (70.7% evalue=1.E-41); hypothetical protein 145950 yijD 2957079 yijD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068672.1 145543 D 273123 CDS YP_068673.1 51594482 2956735 complement(146084..147187) 1 NC_006155.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 147187 trmA 2956735 trmA Yersinia pseudotuberculosis IP 32953 tRNA (uracil-5-)-methyltransferase YP_068673.1 146084 R 273123 CDS YP_068674.2 229310108 2953086 147649..149541 1 NC_006155.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 149541 btuB 2953086 btuB Yersinia pseudotuberculosis IP 32953 vitamin B12/cobalamin outer membrane transporter YP_068674.2 147649 D 273123 CDS YP_068675.1 51594484 2956105 149486..150349 1 NC_006155.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 150349 murI 2956105 murI Yersinia pseudotuberculosis IP 32953 glutamate racemase YP_068675.1 149486 D 273123 CDS YP_068676.1 51594485 2953087 157214..158170 1 NC_006155.1 similar to Yersinia pestis YPO3908 periplasmic protein precursor (99.6% evalue=1.E-175); Escherichia coli JW4186 ytfQ; Hypothetical ABC transporter periplasmic binding protein (75.7% evalue=1.E-134); ribose/sugar ABC transporter substrate-binding protein 158170 2953087 YPTB0127 Yersinia pseudotuberculosis IP 32953 ribose/sugar ABC transporter substrate-binding protein YP_068676.1 157214 D 273123 CDS YP_068677.1 51594486 2953088 158256..159746 1 NC_006155.1 similar to Yersinia pestis YPO3907 sugar transport system ATP-binding protein (99.7% evalue=0); Escherichia coli Z5839 ATP-binding component of ABC transporter (67.4% evalue=0); sugar ABC transporter ATPase 159746 2953088 YPTB0128 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_068677.1 158256 D 273123 CDS YP_068678.1 51594487 2953089 159758..160777 1 NC_006155.1 similar to Yersinia pestis YPO3906 sugar transport system permease (100% evalue=0); Escherichia coli Z5840 ytfT; transport system permease (70.3% evalue=1.E-122); ribose/sugar ABC transporter permease domain 160777 2953089 YPTB0129 Yersinia pseudotuberculosis IP 32953 ribose/sugar ABC transporter permease domain YP_068678.1 159758 D 273123 CDS YP_068679.1 51594488 2953090 160777..161769 1 NC_006155.1 membrane component of a sugar ABC transporter system; ABC transporter permease 161769 2953090 YPTB0130 Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_068679.1 160777 D 273123 CDS YP_068680.1 51594489 2953091 complement(161756..162637) 1 NC_006155.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 162637 2953091 YPTB0131 Yersinia pseudotuberculosis IP 32953 transcriptional regulator HdfR YP_068680.1 161756 R 273123 CDS YP_068681.1 51594490 2953092 162756..163094 1 NC_006155.1 similar to Yersinia pestis YPO3903 conserved hypothetical protein (100% evalue=3.E-62); Escherichia coli JW3737 yifE; Hypothetical protein (83% evalue=1.E-52); hypothetical protein 163094 2953092 YPTB0132 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068681.1 162756 D 273123 CDS YP_068682.1 51594491 2953093 complement(163475..164998) 1 NC_006155.1 similar to Yersinia pestis YPO3902 magnesium chelatase family protein (99.8% evalue=0); Salmonella typhimurium STM3899 yifB; magnesium chelatase, subunit ChlI (62.7% evalue=0); magnesium chelatase family protein 164998 2953093 YPTB0133 Yersinia pseudotuberculosis IP 32953 magnesium chelatase family protein YP_068682.1 163475 R 273123 CDS YP_068683.1 51594492 2955875 165622..167268 1 NC_006155.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 167268 ilvG 2955875 ilvG Yersinia pseudotuberculosis IP 32953 acetolactate synthase 2 catalytic subunit YP_068683.1 165622 D 273123 CDS YP_068684.1 51594493 2955878 167265..167522 1 NC_006155.1 similar to Yersinia pestis YPO3900 ilvM; acetolactate synthase isozyme II small subunit (100% evalue=1.E-41); Escherichia coli Z5280 ilvM; acetolactate synthase II, valine insensitive, small subunit (67.8% evalue=2.E-24); acetolactate synthase 2 regulatory subunit 167522 ilvM 2955878 ilvM Yersinia pseudotuberculosis IP 32953 acetolactate synthase 2 regulatory subunit YP_068684.1 167265 D 273123 CDS YP_068685.1 51594494 2955874 167545..168471 1 NC_006155.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 168471 ilvE 2955874 ilvE Yersinia pseudotuberculosis IP 32953 branched-chain amino acid aminotransferase YP_068685.1 167545 D 273123 CDS YP_068686.1 51594495 2955873 168782..170632 1 NC_006155.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 170632 ilvD 2955873 ilvD Yersinia pseudotuberculosis IP 32953 dihydroxy-acid dehydratase YP_068686.1 168782 D 273123 CDS YP_068687.1 51594496 2955870 170638..172182 1 NC_006155.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 172182 ilvA 2955870 ilvA Yersinia pseudotuberculosis IP 32953 threonine dehydratase YP_068687.1 170638 D 273123 CDS YP_068688.1 51594497 2953094 complement(172313..172777) 1 NC_006155.1 similar to Yersinia pestis YPO3935 membrane protein (72.7% evalue=2.E-63); hypothetical protein 172777 2953094 YPTB0139 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068688.1 172313 R 273123 CDS YP_068689.1 51594498 2953095 complement(172795..173259) 1 NC_006155.1 similar to Yersinia pestis YPO3894 membrane protein (82.4% evalue=2.E-70); hypothetical protein 173259 2953095 YPTB0140 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068689.1 172795 R 273123 CDS YP_068690.1 51594499 2953096 complement(173339..173800) 1 NC_006155.1 similar to Yersinia pestis YPO3894 membrane protein (94.7% evalue=5.E-83); hypothetical protein 173800 2953096 YPTB0141 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068690.1 173339 R 273123 CDS YP_068691.1 51594500 2953097 complement(173784..174662) 1 NC_006155.1 similar to Yersinia pestis YPO3983 conserved hypothetical protein (49.6% evalue=1.E-72); hypothetical protein 174662 2953097 YPTB0142 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068691.1 173784 R 273123 CDS YP_068692.1 51594501 2953098 175310..175519 1 NC_006155.1 similar to Yersinia pestis YPO3890 hypothetical protein. 100% identical; hypothetical protein 175519 2953098 YPTB0143 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068692.1 175310 D 273123 CDS YP_068693.1 51594502 2955880 complement(175574..176455) 1 NC_006155.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 176455 ilvY 2955880 ilvY Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator IlvY YP_068693.1 175574 R 273123 CDS YP_068694.1 51594503 2955872 176746..178224 1 NC_006155.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 178224 ilvC 2955872 ilvC Yersinia pseudotuberculosis IP 32953 ketol-acid reductoisomerase YP_068694.1 176746 D 273123 CDS YP_068695.1 51594504 2953100 180249..180512 1 NC_006155.1 similar to Yersinia pestis YPO3885 hypothetical protein (100% evalue=4.E-45); hypothetical protein 180512 2953100 YPTB0147 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068695.1 180249 D 273123 CDS YP_068696.1 51594505 2953102 181028..181282 1 NC_006155.1 similar to Yersinia pestis YPO3883 imm; colicin immunity protein (49.4% evalue=1.E-21); Salmonella typhi STY3281 bacteriocin immunity protein (44.1% evalue=2.E-16); colicin immunity protein 181282 2953102 YPTB0149 Yersinia pseudotuberculosis IP 32953 colicin immunity protein YP_068696.1 181028 D 273123 CDS YP_068697.1 51594506 2956392 181435..181854 1 NC_006155.1 similar to Yersinia pestis YPO3884 colicin (partial) (48% evalue=1.E-15); Pseudomonas aeruginosa PA1150 pys2; pyocin S2 (47.4% evalue=4.E-35); pyocin S2 (partial) 181854 pys2 2956392 pys2 Yersinia pseudotuberculosis IP 32953 pyocin S2 (partial) YP_068697.1 181435 D 273123 CDS YP_068698.1 51594507 2955882 181856..182110 1 NC_006155.1 similar to Yersinia pestis YPO3883 imm; colicin immunity protein (51.9% evalue=2.E-19); Pseudomonas aeruginosa PA1151 imm2; pyocin S2 immunity protein (60.4% evalue=6.E-23); pyocin S2 immunity protein 182110 imm2 2955882 imm2 Yersinia pseudotuberculosis IP 32953 pyocin S2 immunity protein YP_068698.1 181856 D 273123 CDS YP_068699.1 51594508 2956393 182263..182691 1 NC_006155.1 similar to Yersinia pestis YPO3884 colicin (partial) (55.5% evalue=3.E-19); Pseudomonas aeruginosa PA1150 pys2; pyocin S2 (48.2% evalue=5.E-31); pyocin S2 (partial) 182691 pys2 2956393 pys2 Yersinia pseudotuberculosis IP 32953 pyocin S2 (partial) YP_068699.1 182263 D 273123 CDS YP_068700.1 51594509 2955881 182688..182951 1 NC_006155.1 similar to Yersinia pestis YPO3883 imm; colicin immunity protein (50.5% evalue=5.E-19); Salmonella typhi STY3281 bacteriocin immunity protein (58.8% evalue=6.E-23); colicin immunity protein (E7) 182951 imm 2955881 imm Yersinia pseudotuberculosis IP 32953 colicin immunity protein (E7) YP_068700.1 182688 D 273123 CDS YP_068701.1 51594510 2953103 183509..183880 1 NC_006155.1 similar to Yersinia pestis YPO1234 probable phage antitermination protein Q (52.9% evalue=3.E-27); Salmonella typhimurium STM2239 phage protein; homology to antiterminator protein Q of phage P5 (40% evalue=4.E-19); phage antitermination protein Q 183880 2953103 YPTB0154 Yersinia pseudotuberculosis IP 32953 phage antitermination protein Q YP_068701.1 183509 D 273123 CDS YP_068702.1 51594511 2953104 184491..184826 1 NC_006155.1 not present in pestis; hypothetical protein 184826 2953104 YPTB0155 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068702.1 184491 D 273123 CDS YP_068703.1 51594512 2953105 complement(185085..185831) 1 NC_006155.1 similar to Yersinia pestis YPO3881 chaperone protein (99.5% evalue=1.E-137); Pseudomonas aeruginosa PA2132 probable pili assembly chaperone (46.4% evalue=2.E-43); chaperone protein 185831 2953105 YPTB0156 Yersinia pseudotuberculosis IP 32953 chaperone protein YP_068703.1 185085 R 273123 CDS YP_068704.1 51594513 2953106 complement(185869..187236) 1 NC_006155.1 similar to Yersinia pestis YPO3880 exported protein (100% evalue=0); Pseudomonas aeruginosa PA2131 hypothetical protein (44.6% evalue=9.E-94); hypothetical protein 187236 2953106 YPTB0157 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068704.1 185869 R 273123 CDS YP_068705.1 51594514 2953107 complement(187253..189904) 1 NC_006155.1 similar to Yersinia pestis YPO3879 outer membrane usher protein (98.8% evalue=0); Pseudomonas aeruginosa PA2130 probable fimbrial biogenesis usher protein (46.7% evalue=0); outer membrane fimbrial usher porin 189904 2953107 YPTB0158 Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_068705.1 187253 R 273123 CDS YP_068706.1 51594515 2953108 complement(189932..190663) 1 NC_006155.1 similar to Yersinia pestis YPO3878 fimbrial chaperone (99.5% evalue=1.E-134); Pseudomonas aeruginosa PA2129 probable pili assembly chaperone (44.1% evalue=3.E-49); fimbrial chaperone 190663 2953108 YPTB0159 Yersinia pseudotuberculosis IP 32953 fimbrial chaperone YP_068706.1 189932 R 273123 CDS YP_068707.1 51594516 2953109 complement(190727..191257) 1 NC_006155.1 similar to Yersinia pestis YPO3877 fimbrial protein (100% evalue=8.E-93); Salmonella typhimurium STM0340 stbA; fimbriae; major subunit (49.1% evalue=2.E-37); fimbrial protein 191257 2953109 YPTB0160 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_068707.1 190727 R 273123 CDS YP_068708.1 51594517 2953110 complement(192049..192840) 1 NC_006155.1 similar to Yersinia pestis YPO3874 exported protein (99.6% evalue=1.E-151); Caulobacter crescentus CC2650 glutamine cyclotransferase (37.6% evalue=5.E-42); hypothetical protein 192840 2953110 YPTB0161 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068708.1 192049 R 273123 CDS YP_068709.1 51594518 2956308 complement(193079..193360) 1 NC_006155.1 similar to Yersinia pestis YPO3873 ppiC; peptidyl-prolyl cis-trans isomerase C (100% evalue=2.E-49); Escherichia coli JW3748 ppiC; peptidyl-prolyl cis/trans isomerases (67.7% evalue=4.E-31); peptidyl-prolyl cis-trans isomerase 193360 ppiC 2956308 ppiC Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase YP_068709.1 193079 R 273123 CDS YP_068710.1 51594519 2956424 193564..195585 1 NC_006155.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 195585 rep 2956424 rep Yersinia pseudotuberculosis IP 32953 ATP-dependent DNA helicase Rep YP_068710.1 193564 D 273123 CDS YP_068711.1 51594520 2953111 complement(195753..197249) 1 NC_006155.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 197249 2953111 YPTB0164 Yersinia pseudotuberculosis IP 32953 guanosine pentaphosphate phosphohydrolase YP_068711.1 195753 R 273123 CDS YP_068712.1 51594521 2956445 complement(197253..198539) 1 NC_006155.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 198539 rhlB 2956445 rhlB Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase RhlB YP_068712.1 197253 R 273123 CDS YP_068713.1 51594522 2956836 198658..198984 1 NC_006155.1 similar to Yersinia pestis YPO3868 trxA, tsnC, fipA; thioredoxin 1 (100% evalue=2.E-57); Escherichia coli JW3754 trxA; Thioredoxin (87% evalue=2.E-51); thioredoxin 198984 trxA 2956836 trxA Yersinia pseudotuberculosis IP 32953 thioredoxin YP_068713.1 198658 D 273123 CDS YP_068714.1 51594523 2956447 199464..200723 1 NC_006155.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 200723 rho 2956447 rho Yersinia pseudotuberculosis IP 32953 transcription termination factor Rho YP_068714.1 199464 D 273123 CDS YP_068715.1 51594524 2956431 201257..202354 1 NC_006155.1 similar to Yersinia pestis YPO3866 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (100% evalue=0); Escherichia coli ECs4717 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (80.9% evalue=1.E-166); undecaprenyl-phosphate alpha-GlcNAc transferase 202354 rfe 2956431 rfe Yersinia pseudotuberculosis IP 32953 undecaprenyl-phosphate alpha-GlcNAc transferase YP_068715.1 201257 D 273123 CDS YP_068716.1 51594525 2956903 202390..203451 1 NC_006155.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 203451 wzzE 2956903 wzzE Yersinia pseudotuberculosis IP 32953 lipopolysaccharide biosynthesis protein WzzE YP_068716.1 202390 D 273123 CDS YP_068717.1 51594526 2956435 203800..204930 1 NC_006155.1 similar to Yersinia pestis YPO3864 rffE, wecB, nfrC; UDP-N-acetylglucosamine 2-epimerase (99.7% evalue=0); Escherichia coli ECs4719 UDP-N-acetyl glucosamine -2-epimerase (78.6% evalue=1.E-172); UDP-N-acetylglucosamine 2-epimerase 204930 rffE 2956435 rffE Yersinia pseudotuberculosis IP 32953 UDP-N-acetylglucosamine 2-epimerase YP_068717.1 203800 D 273123 CDS YP_068718.1 51594527 2956434 204927..206189 1 NC_006155.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 206189 wecC 2956434 wecC Yersinia pseudotuberculosis IP 32953 UDP-N-acetyl-D-mannosamine dehydrogenase YP_068718.1 204927 D 273123 CDS YP_068719.1 51594528 2956436 206186..207253 1 NC_006155.1 similar to Yersinia pestis YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase (99.4% evalue=0); Salmonella typhimurium STM3922 rffG; dTDP-glucose 4,6-dehydratase (83% evalue=1.E-175); dTDP-D-glucose-4,6-dehydratase 207253 rffG 2956436 rffG Yersinia pseudotuberculosis IP 32953 dTDP-D-glucose-4,6-dehydratase YP_068719.1 206186 D 273123 CDS YP_068720.1 51594529 2956437 207548..208429 1 NC_006155.1 similar to Yersinia pestis YPO3861 rffH; glucose-1-phosphate thymidylyltransferase (100% evalue=1.E-169); Escherichia coli b3789 rffH; glucose-1-phosphate thymidylyltransferase (dtdp-glucose synthase) (dtdp-glucose pyrophosphorylase) (86.6% evalue=1.E-148); glucose-1-phosphate thymidylyltransferase 208429 rffH 2956437 rffH Yersinia pseudotuberculosis IP 32953 glucose-1-phosphate thymidylyltransferase YP_068720.1 207548 D 273123 CDS YP_068721.1 51594530 2956433 208476..209144 1 NC_006155.1 similar to Yersinia pestis YPO3860 rffC, wecD; lipopolysaccharide biosynthesis protein (97.2% evalue=1.E-120); Escherichia coli JW3764 yifH; Hypothetical protein (49.2% evalue=6.E-44); TDP-fucosamine acetyltransferase 209144 rffC 2956433 rffC Yersinia pseudotuberculosis IP 32953 TDP-fucosamine acetyltransferase YP_068721.1 208476 D 273123 CDS YP_068722.1 51594531 2956432 209146..210276 1 NC_006155.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 210276 rffA 2956432 rffA Yersinia pseudotuberculosis IP 32953 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_068722.1 209146 D 273123 CDS YP_068723.1 51594532 2956901 210278..211534 1 NC_006155.1 similar to Yersinia pestis YPO3858 wzxE, wzx; lipopolysaccharide biosynthesis protein (99.7% evalue=0); Salmonella typhi STY3629 lipopolysaccharide biosynthesis protein (75% evalue=0); PST family o-antigen export protein 211534 wzxE 2956901 wzxE Yersinia pseudotuberculosis IP 32953 PST family o-antigen export protein YP_068723.1 210278 D 273123 CDS YP_068724.1 51594533 2953112 211557..212642 1 NC_006155.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 212642 2953112 YPTB0177 Yersinia pseudotuberculosis IP 32953 4-alpha-L-fucosyltransferase YP_068724.1 211557 D 273123 CDS YP_068725.1 51594534 2956897 212639..214003 1 NC_006155.1 enterobacterial common antigen polymerase; common antigen polymerase 214003 wecF 2956897 wecF Yersinia pseudotuberculosis IP 32953 common antigen polymerase YP_068725.1 212639 D 273123 CDS YP_068726.1 51594535 2956898 214012..214752 1 NC_006155.1 similar to Yersinia pestis YPO3855 wecG, rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase (99.5% evalue=1.E-140); Escherichia coli b3794 wecg, rffM; (UDP-mannaca transferase) (71.1% evalue=1.E-101); UDP-N-acetyl-D-mannosaminuronic acid transferase 214752 wecG 2956898 wecG Yersinia pseudotuberculosis IP 32953 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_068726.1 214012 D 273123 CDS YP_068727.1 51594536 2953113 215316..216707 1 NC_006155.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter 216707 2953113 YPTB0180 Yersinia pseudotuberculosis IP 32953 transporter YP_068727.1 215316 D 273123 CDS YP_068728.1 51594537 2955784 complement(218227..219447) 1 NC_006155.1 similar to Yersinia pestis YPO3852 hemY; protoheme IX biogenesis protein (99.7% evalue=0); Escherichia coli Z5316 hemY; a late step of protoheme IX synthesis (70.6% evalue=1.E-163); protoheme IX biogenesis protein 219447 hemY 2955784 hemY Yersinia pseudotuberculosis IP 32953 protoheme IX biogenesis protein YP_068728.1 218227 R 273123 CDS YP_068729.1 51594538 2955783 complement(219450..220574) 1 NC_006155.1 similar to Yersinia pestis YPO3851 hemX; uroporphyrin-III C-methyltransferase (99.7% evalue=0); Escherichia coli JW3775 hemX; uroporphyrin-III C-methyltransferase (68.1% evalue=1.E-135); uroporphyrinogen III C-methyltransferase 220574 hemX 2955783 hemX Yersinia pseudotuberculosis IP 32953 uroporphyrinogen III C-methyltransferase YP_068729.1 219450 R 273123 CDS YP_068730.1 51594539 2955776 complement(220605..221354) 1 NC_006155.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 221354 hemD 2955776 hemD Yersinia pseudotuberculosis IP 32953 uroporphyrinogen-III synthase YP_068730.1 220605 R 273123 CDS YP_068731.1 51594540 2955775 complement(221351..222292) 1 NC_006155.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 222292 hemC 2955775 hemC Yersinia pseudotuberculosis IP 32953 porphobilinogen deaminase YP_068731.1 221351 R 273123 CDS YP_068732.1 51594541 2955383 222786..225338 1 NC_006155.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 225338 cyaA 2955383 cyaA Yersinia pseudotuberculosis IP 32953 adenylate cyclase YP_068732.1 222786 D 273123 CDS YP_068733.1 51594542 2953114 complement(225858..227066) 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase for IS285 insertion element 227066 2953114 YPTB0186 Yersinia pseudotuberculosis IP 32953 transposase for IS285 insertion element YP_068733.1 225858 R 273123 CDS YP_068734.1 51594543 2955385 complement(228439..228762) 1 NC_006155.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 228762 cyaY 2955385 cyaY Yersinia pseudotuberculosis IP 32953 frataxin-like protein YP_068734.1 228439 R 273123 CDS YP_068735.1 51594544 2953116 228914..229114 1 NC_006155.1 similar to Yersinia pestis YPO3846 lipoprotein. 90% identical; hypothetical protein 229114 2953116 YPTB0189 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068735.1 228914 D 273123 CDS YP_068736.1 51594545 2955430 229282..230106 1 NC_006155.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 230106 dapF 2955430 dapF Yersinia pseudotuberculosis IP 32953 diaminopimelate epimerase YP_068736.1 229282 D 273123 CDS YP_068737.1 51594546 2953117 230171..230875 1 NC_006155.1 similar to Yersinia pestis YPO3844 conserved hypothetical protein (100% evalue=1.E-130); Escherichia coli b3810 yigA; hypothetical 26.7 kD protein in dapF-xerC intergenic region (ORF 235) (67.5% evalue=3.E-83); hypothetical protein 230875 2953117 YPTB0191 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068737.1 230171 D 273123 CDS YP_068738.1 51594547 2956906 230872..231783 1 NC_006155.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 231783 xerC 2956906 xerC Yersinia pseudotuberculosis IP 32953 site-specific tyrosine recombinase XerC YP_068738.1 230872 D 273123 CDS YP_068739.1 51594548 2953118 231783..232499 1 NC_006155.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 232499 2953118 YPTB0193 Yersinia pseudotuberculosis IP 32953 flavin mononucleotide phosphatase YP_068739.1 231783 D 273123 CDS YP_068740.1 51594549 2956884 232598..234760 1 NC_006155.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 234760 uvrD 2956884 uvrD Yersinia pseudotuberculosis IP 32953 DNA-dependent helicase II YP_068740.1 232598 D 273123 CDS YP_068741.1 51594550 2953119 complement(234874..235539) 1 NC_006155.1 similar to Yersinia pestis YPO3840 TetR-family regulatory protein (96% evalue=1.E-118); Mesorhizobium loti mll3386 transcriptional regulator (47.8% evalue=9.E-43); TetR family regulatory protein 235539 2953119 YPTB0195 Yersinia pseudotuberculosis IP 32953 TetR family regulatory protein YP_068741.1 234874 R 273123 CDS YP_068742.1 51594551 2953120 235967..237199 1 NC_006155.1 similar to Yersinia pestis YPO3839 conserved hypothetical protein (98.7% evalue=0); Sinorhizobium meliloti SMa1334 conserved hypothetical protein (55.7% evalue=1.E-121); hypothetical protein 237199 2953120 YPTB0196 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068742.1 235967 D 273123 CDS YP_068743.1 51594552 2953121 237213..238055 1 NC_006155.1 similar to Yersinia pestis YPO3838 conserved hypothetical protein (100% evalue=1.E-161); Sinorhizobium meliloti SMa1332 conserved hypothetical protein (71.6% evalue=1.E-109); hypothetical protein 238055 2953121 YPTB0197 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068743.1 237213 D 273123 CDS YP_068744.1 51594553 2955350 238705..239655 1 NC_006155.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 239655 corA 2955350 corA Yersinia pseudotuberculosis IP 32953 magnesium/nickel/cobalt transporter CorA YP_068744.1 238705 D 273123 CDS YP_068745.1 51594554 2956401 complement(239753..240643) 1 NC_006155.1 similar to Yersinia pestis YPO3836 rarD; membrane protein (100% evalue=1.E-168); Salmonella typhimurium STM3955 rarD; chloramphenicol resistance (75.7% evalue=1.E-129); drug/metabolite transporter (DMT) superfamily protein RarD 240643 rarD 2956401 rarD Yersinia pseudotuberculosis IP 32953 drug/metabolite transporter (DMT) superfamily protein RarD YP_068745.1 239753 R 273123 CDS YP_068746.1 51594555 2953122 complement(240730..241200) 1 NC_006155.1 similar to Yersinia pestis YPO3835 conserved hypothetical protein (100% evalue=2.E-83); Escherichia coli b3820 yigI; hypothetical 17.1 kD protein in rarD-pldA intergenic region (66.8% evalue=2.E-55); hypothetical protein 241200 2953122 YPTB0200 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068746.1 240730 R 273123 CDS YP_068747.1 51594556 2956276 241422..242300 1 NC_006155.1 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 242300 pldA 2956276 pldA Yersinia pseudotuberculosis IP 32953 phospholipase A YP_068747.1 241422 D 273123 CDS YP_068748.1 51594557 2956425 242377..244209 1 NC_006155.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 244209 reqQ 2956425 reqQ Yersinia pseudotuberculosis IP 32953 ATP-dependent DNA helicase RecQ YP_068748.1 242377 D 273123 CDS YP_068749.1 51594558 2956449 244316..244936 1 NC_006155.1 similar to Yersinia pestis YPO3832 rhtC; threonine efflux protein (100% evalue=1.E-116); Salmonella typhi STY3600 rhtC; threonine efflux protein (72.3% evalue=2.E-85); threonine efflux system 244936 rhtC 2956449 rhtC Yersinia pseudotuberculosis IP 32953 threonine efflux system YP_068749.1 244316 D 273123 CDS YP_068750.1 51594559 2956448 complement(244987..245607) 1 NC_006155.1 similar to Yersinia pestis YPO3831 rhtB; homoserine/homoserine lactone efflux protein (100% evalue=1.E-111); Escherichia coli ECs4754 homoserine/homoserine lactone effulux protein (75.4% evalue=5.E-88); homoserine/homoserine lactone efflux protein 245607 rhtB 2956448 rhtB Yersinia pseudotuberculosis IP 32953 homoserine/homoserine lactone efflux protein YP_068750.1 244987 R 273123 CDS YP_068751.1 51594560 2956277 245803..246816 1 NC_006155.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 246816 pldB 2956277 pldB Yersinia pseudotuberculosis IP 32953 lysophospholipase L2 YP_068751.1 245803 D 273123 CDS YP_068752.1 51594561 2953123 246851..247660 1 NC_006155.1 purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; sugar phosphatase 247660 2953123 YPTB0206 Yersinia pseudotuberculosis IP 32953 sugar phosphatase YP_068752.1 246851 D 273123 CDS YP_068753.1 51594562 2953124 247936..249135 1 NC_006155.1 similar to Yersinia pestis YPO3828 hypothetical protein (99.7% evalue=0); hypothetical protein 249135 2953124 YPTB0207 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068753.1 247936 D 273123 CDS YP_068754.1 51594563 2955713 complement(249209..250324) 1 NC_006155.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 250324 glpQ 2955713 glpQ Yersinia pseudotuberculosis IP 32953 glycerophosphodiester phosphodiesterase YP_068754.1 249209 R 273123 CDS YP_068755.1 51594564 2955706 250949..252604 1 NC_006155.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 252604 glpA 2955706 glpA Yersinia pseudotuberculosis IP 32953 sn-glycerol-3-phosphate dehydrogenase subunit A YP_068755.1 250949 D 273123 CDS YP_068756.1 51594565 2955707 252594..253868 1 NC_006155.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 253868 glpB 2955707 glpB Yersinia pseudotuberculosis IP 32953 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_068756.1 252594 D 273123 CDS YP_068757.1 51594566 2955708 253865..255160 1 NC_006155.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 255160 glpC 2955708 glpC Yersinia pseudotuberculosis IP 32953 sn-glycerol-3-phosphate dehydrogenase subunit C YP_068757.1 253865 D 273123 CDS YP_068758.1 51594567 2955485 complement(255304..255831) 1 NC_006155.1 similar to Yersinia pestis YPO3823 dcrB; lipoprotein (100% evalue=1.E-92); Salmonella typhimurium STM3580 inner membrane lipoprotein (58.6% evalue=5.E-56); hypothetical protein 255831 drcB 2955485 drcB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068758.1 255304 R 273123 CDS YP_068759.1 51594568 2957067 complement(255961..256629) 1 NC_006155.1 similar to Yersinia pestis YPO3822 yhhQ; membrane protein (99.5% evalue=1.E-123); Salmonella typhimurium STM3579 yhhQ; integral membrane protein (75.2% evalue=1.E-90); hypothetical protein 256629 yhhQ 2957067 yhhQ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068759.1 255961 R 273123 CDS YP_068760.1 51594569 2953125 256913..257167 1 NC_006155.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 257167 2953125 YPTB0214 Yersinia pseudotuberculosis IP 32953 sulfur transfer protein SirA YP_068760.1 256913 D 273123 CDS YP_068761.1 51594570 2955266 complement(257232..259598) 1 NC_006155.1 P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase 259598 zntA 2955266 zntA Yersinia pseudotuberculosis IP 32953 zinc/cadmium/mercury/lead-transporting ATPase YP_068761.1 257232 R 273123 CDS YP_068762.1 51594571 2957066 complement(260012..260638) 1 NC_006155.1 similar to Yersinia pestis YPO3819 yhhN; membrane protein (100% evalue=1.E-117); Escherichia coli ECs4317 enzyme (66.8% evalue=4.E-78); hypothetical protein 260638 yhhN 2957066 yhhN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068762.1 260012 R 273123 CDS YP_068763.1 51594572 2953126 260928..261248 1 NC_006155.1 similar to Yersinia pestis YPO3818 conserved hypothetical protein (100% evalue=2.E-55); Pseudomonas aeruginosa PA3979 hypothetical protein (45.6% evalue=1.E-21); hypothetical protein 261248 2953126 YPTB0217 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068763.1 260928 D 273123 CDS YP_068764.1 51594573 2953127 261460..261879 1 NC_006155.1 similar to Yersinia pestis YPO3817 membrane protein (100% evalue=2.E-73); Salmonella typhimurium STM3574 yhhM; inner membrane protein (38.4% evalue=2.E-17); hypothetical protein 261879 2953127 YPTB0218 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068764.1 261460 D 273123 CDS YP_068765.1 51594574 2957065 complement(262056..262328) 1 NC_006155.1 similar to Yersinia pestis YPO3816a yhhL; membrane protein (100% evalue=5.E-48); Escherichia coli b3466 yhhL; hypothetical 10.3 kD protein in ftsY-nikA intergenic region (64.2% evalue=2.E-25); hypothetical protein 262328 yhhL 2957065 yhhL Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068765.1 262056 R 273123 CDS YP_068766.1 51594575 2953128 complement(262318..262980) 1 NC_006155.1 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 262980 rsmD 2953128 rsmD Yersinia pseudotuberculosis IP 32953 16S rRNA m(2)G966-methyltransferase YP_068766.1 262318 R 273123 CDS YP_068767.1 51594576 2955662 263262..264986 1 NC_006155.1 similar to Yersinia pestis YPO3814 ftsY; cell division protein (93.2% evalue=0); Escherichia coli JW3429 ftsY; signal recognition particle (ffh and ffs) receptor (60.9% evalue=1.E-167); cell division protein 264986 ftsY 2955662 ftsY Yersinia pseudotuberculosis IP 32953 cell division protein YP_068767.1 263262 D 273123 CDS YP_068768.1 51594577 2955652 264992..265660 1 NC_006155.1 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 265660 ftsE 2955652 ftsE Yersinia pseudotuberculosis IP 32953 cell division protein FtsE YP_068768.1 264992 D 273123 CDS YP_068769.1 51594578 2955661 265650..266603 1 NC_006155.1 ABC transporter, membrane protein; cell division protein FtsX 266603 ftsX 2955661 ftsX Yersinia pseudotuberculosis IP 32953 cell division protein FtsX YP_068769.1 265650 D 273123 CDS YP_068770.1 51594579 2956525 266914..267771 1 NC_006155.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 267771 rpoH 2956525 rpoH Yersinia pseudotuberculosis IP 32953 RNA polymerase factor sigma-32 YP_068770.1 266914 D 273123 CDS YP_068771.1 51594580 2953129 complement(267978..268370) 1 NC_006155.1 similar to Yersinia pestis YPO3809 yhhK; acetyltransferase (99.2% evalue=4.E-72); Salmonella typhi STY4247 yhhK; conserved hypothetical protein (45.3% evalue=2.E-24); acetyltransferase 268370 2953129 YPTB0225 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_068771.1 267978 R 273123 CDS YP_068772.1 51594581 2955954 268792..269907 1 NC_006155.1 similar to Yersinia pestis YPO3808 livK, livJ; branched-chain amino acid-binding protein (99.4% evalue=0); Escherichia coli Z4829 livK; high-affinity leucine-specific transport system; periplasmic binding protein (75.3% evalue=1.E-165); branched chain amino acid ABC transporter substrate-binding protein 269907 livK 2955954 livK Yersinia pseudotuberculosis IP 32953 branched chain amino acid ABC transporter substrate-binding protein YP_068772.1 268792 D 273123 CDS YP_068773.1 51594582 2955953 270088..271014 1 NC_006155.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 271014 livH 2955953 livH Yersinia pseudotuberculosis IP 32953 branched-chain amino acid transporter permease subunit LivH YP_068773.1 270088 D 273123 CDS YP_068774.1 51594583 2955955 271011..272297 1 NC_006155.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 272297 livM 2955955 livM Yersinia pseudotuberculosis IP 32953 leucine/isoleucine/valine transporter permease subunit YP_068774.1 271011 D 273123 CDS YP_068775.1 51594584 2955952 272294..273061 1 NC_006155.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 273061 livG 2955952 livG Yersinia pseudotuberculosis IP 32953 leucine/isoleucine/valine transporter ATP-binding subunit YP_068775.1 272294 D 273123 CDS YP_068776.1 51594585 2955951 273106..273807 1 NC_006155.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 273807 livF 2955951 livF Yersinia pseudotuberculosis IP 32953 leucine/isoleucine/valine transporter ATP-binding subunit YP_068776.1 273106 D 273123 CDS YP_068777.1 51594586 2953130 274035..274496 1 NC_006155.1 similar to Yersinia pestis YPO3803 hypothetical protein (86.2% evalue=7.E-72); hypothetical protein 274496 2953130 YPTB0231 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068777.1 274035 D 273123 CDS YP_068778.1 51594587 2953131 complement(274611..275717) 1 NC_006155.1 similar to Yersinia pestis YPO3802 exported protein (81.2% evalue=1.E-177); hypothetical protein 275717 2953131 YPTB0232 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068778.1 274611 R 273123 CDS YP_068779.1 51594588 2953132 complement(275942..276460) 1 NC_006155.1 similar to Yersinia pestis YPO3801 exported protein (99.4% evalue=3.E-96); hypothetical protein 276460 2953132 YPTB0233 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068779.1 275942 R 273123 CDS YP_068780.1 51594589 2953133 complement(276522..277169) 1 NC_006155.1 similar to Yersinia pestis YPO3800 exported protein (96.7% evalue=1.E-117); hypothetical protein 277169 2953133 YPTB0234 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068780.1 276522 R 273123 CDS YP_068781.1 51594590 2953134 complement(277141..277827) 1 NC_006155.1 similar to Yersinia pestis YPO3800 exported protein (35.5% evalue=3.E-22); hypothetical protein 277827 2953134 YPTB0235 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068781.1 277141 R 273123 CDS YP_068782.1 51594591 2953135 complement(277845..280178) 1 NC_006155.1 similar to Yersinia pestis YPO3798 exported protein (99.2% evalue=0); hypothetical protein 280178 2953135 YPTB0236 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068782.1 277845 R 273123 CDS YP_068783.1 51594592 2953136 complement(280445..280936) 1 NC_006155.1 similar to Yersinia pestis YPO3797 exported protein (100% evalue=5.E-85); hypothetical protein 280936 2953136 YPTB0237 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068783.1 280445 R 273123 CDS YP_068784.1 51594593 2956860 281491..282810 1 NC_006155.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 282810 ugpB 2956860 ugpB Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate transporter periplasmic binding protein YP_068784.1 281491 D 273123 CDS YP_068785.1 51594594 2956859 283108..283992 1 NC_006155.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 283992 ugpA 2956859 ugpA Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate transporter permease YP_068785.1 283108 D 273123 CDS YP_068786.1 51594595 2956862 283992..284837 1 NC_006155.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 284837 ugpE 2956862 ugpE Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate transporter membrane protein YP_068786.1 283992 D 273123 CDS YP_068787.1 51594596 2956861 284844..285917 1 NC_006155.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 285917 ugpC 2956861 ugpC Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate transporter ATP-binding subunit YP_068787.1 284844 D 273123 CDS YP_068788.1 51594597 2956863 285914..286663 1 NC_006155.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 286663 ugpQ 2956863 ugpQ Yersinia pseudotuberculosis IP 32953 glycerophosphodiester phosphodiesterase YP_068788.1 285914 D 273123 CDS YP_068789.1 51594598 2953137 286764..287720 1 NC_006155.1 similar to Yersinia pestis YPO3791 membrane protein (99.6% evalue=1.E-165); Agrobacterium tumefaciens AGR_C_121 MdcF (27.6% evalue=1.E-34); malonate permease 287720 2953137 YPTB0243 Yersinia pseudotuberculosis IP 32953 malonate permease YP_068789.1 286764 D 273123 CDS YP_068790.1 51594599 2953138 287857..288525 1 NC_006155.1 not present in pestis; hypothetical protein 288525 2953138 YPTB0244 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068790.1 287857 D 273123 CDS YP_068791.1 51594600 2953139 288538..289740 1 NC_006155.1 similar to Staphylococcus aureus_Mu50 SAV0141 hypothetical protein (25.8% evalue=1.E-26); Staphylococcus aureus_N315 SA0142 hypothetical protein, similar to DNA-binding protein (25.8% evalue=1.E-26); hypothetical protein 289740 2953139 YPTB0245 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068791.1 288538 D 273123 CDS YP_068792.1 51594601 2955982 289947..290846 1 NC_006155.1 similar to Yersinia pestis YPO3790 yigM; membrane protein (99.6% evalue=1.E-175); Escherichia coli JW3803 yigM; Hypothetical protein (73.7% evalue=1.E-129); acetate efflux pump, MadN 290846 MadN 2955982 MadN Yersinia pseudotuberculosis IP 32953 acetate efflux pump, MadN YP_068792.1 289947 D 273123 CDS YP_068793.1 51594602 2956030 complement(290734..291687) 1 NC_006155.1 similar to Yersinia pestis YPO3789 metR; lysR-family transcriptional regulatory protein (99.6% evalue=0); Escherichia coli b3828 metR; transcriptional activator protein metR (88.5% evalue=1.E-159); LysR family transcriptional regulator 291687 metR 2956030 metR Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_068793.1 290734 R 273123 CDS YP_068794.1 51594603 2956023 291793..294069 1 NC_006155.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 294069 metE 2956023 metE Yersinia pseudotuberculosis IP 32953 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_068794.1 291793 D 273123 CDS YP_068795.1 51594604 2953140 complement(294124..294927) 1 NC_006155.1 similar to Yersinia pestis YPO3787 carboxymethylenebutenolidase (99.6% evalue=1.E-159); Escherichia coli ECs4760 carboxymethylenebutenolidase (71.3% evalue=1.E-108); carboxymethylenebutenolidase 294927 2953140 YPTB0249 Yersinia pseudotuberculosis IP 32953 carboxymethylenebutenolidase YP_068795.1 294124 R 273123 CDS YP_068796.1 51594605 2956858 295424..296185 1 NC_006155.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 296185 udp 2956858 udp Yersinia pseudotuberculosis IP 32953 uridine phosphorylase YP_068796.1 295424 D 273123 CDS YP_068797.1 51594606 2953141 296306..297166 1 NC_006155.1 similar to Yersinia pestis YPO3785 conserved hypothetical protein (96.5% evalue=1.E-155); C. perfringens CPE1952 ptp; protein-tyrosine phosphatase (30% evalue=2.E-31); hypothetical protein 297166 2953141 YPTB0251 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068797.1 296306 D 273123 CDS YP_068798.1 51594607 2953142 297507..299324 1 NC_006155.1 similar to Yersinia pestis YPO3784 carbon starvation protein (100% evalue=0); Bacillus subtilis BG11924 cstA; carbon starvation protein (71% evalue=0); carbon starvation protein 299324 2953142 YPTB0252 Yersinia pseudotuberculosis IP 32953 carbon starvation protein YP_068798.1 297507 D 273123 CDS YP_068799.1 51594608 2953143 299861..300391 1 NC_006155.1 similar to Yersinia pestis YPO3783 membrane protein (97.7% evalue=1.E-100); Mesorhizobium loti mll0121 hypothetical protein (46.2% evalue=5.E-34); hypothetical protein 300391 2953143 YPTB0253 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068799.1 299861 D 273123 CDS YP_068800.1 51594609 2956561 300599..302104 1 NC_006155.1 similar to Yersinia pestis YPO3782 rumC; DNA recombination protein (99.7% evalue=0); Salmonella typhi STY3590 yigN; membrane protein (73.5% evalue=1.E-173); DNA recombination protein 302104 rumC 2956561 rumC Yersinia pseudotuberculosis IP 32953 DNA recombination protein YP_068800.1 300599 D 273123 CDS YP_068801.1 51594610 2956852 302196..302951 1 NC_006155.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 302951 ubiE 2956852 ubiE Yersinia pseudotuberculosis IP 32953 ubiquinone/menaquinone biosynthesis methyltransferase YP_068801.1 302196 D 273123 CDS YP_068802.1 51594611 2953144 302983..303615 1 NC_006155.1 similar to Yersinia pestis YPO3780 conserved hypothetical protein (100% evalue=1.E-113); Salmonella typhimurium STM3971 yigP; inner membrane protein (56.8% evalue=3.E-57); hypothetical protein 303615 2953144 YPTB0256 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068802.1 302983 D 273123 CDS YP_068803.1 51594612 2955151 303615..305246 1 NC_006155.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 305246 ubiB 2955151 ubiB Yersinia pseudotuberculosis IP 32953 ubiquinone biosynthesis protein UbiB YP_068803.1 303615 D 273123 CDS YP_068804.1 51594613 2956662 305426..305692 1 NC_006155.1 similar to Yersinia pestis YPO3778 tatA, mtta1; Sec-independent protein translocase TatA (100% evalue=6.E-44); Escherichia coli Z5358 tatA; twin arginine translocation protein; sec-independent protein export (64.1% evalue=7.E-21); Sec-independent protein translocase TatA 305692 tatA 2956662 tatA Yersinia pseudotuberculosis IP 32953 Sec-independent protein translocase TatA YP_068804.1 305426 D 273123 CDS YP_068805.1 51594614 2956663 305696..306358 1 NC_006155.1 similar to Yersinia pestis YPO3777 tatB, mtta2; Sec-independent protein translocase TatB (99% evalue=1.E-117); Salmonella typhimurium STM3974 tatB; component of Sec-independent protein secretion pathway (64.3% evalue=8.E-50); Sec-independent protein translocase TatB 306358 tatB 2956663 tatB Yersinia pseudotuberculosis IP 32953 Sec-independent protein translocase TatB YP_068805.1 305696 D 273123 CDS YP_068806.1 51594615 2956664 306361..307137 1 NC_006155.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 307137 tatC 2956664 tatC Yersinia pseudotuberculosis IP 32953 twin-arginine protein translocation system subunit TatC YP_068806.1 306361 D 273123 CDS YP_068807.1 51594616 2953145 307193..307975 1 NC_006155.1 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 307975 2953145 YPTB0261 Yersinia pseudotuberculosis IP 32953 DNase TatD YP_068807.1 307193 D 273123 CDS YP_068808.1 51594617 2955774 307990..309012 1 NC_006155.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 309012 hemB 2955774 hemB Yersinia pseudotuberculosis IP 32953 delta-aminolevulinic acid dehydratase YP_068808.1 307990 D 273123 CDS YP_068809.1 51594618 2956430 complement(309122..309610) 1 NC_006155.1 similar to Yersinia pestis YPO3770 rfaH, hlyT, sfrB; regulatory protein (99.3% evalue=8.E-89); Escherichia coli b3842 rfaH, hlyT, sfrB; transcriptional activator rfaH (64.5% evalue=1.E-58); transcriptional activator RfaH 309610 rfaH 2956430 rfaH Yersinia pseudotuberculosis IP 32953 transcriptional activator RfaH YP_068809.1 309122 R 273123 CDS YP_068810.1 51594619 2953146 309858..311354 1 NC_006155.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 311354 2953146 YPTB0264 Yersinia pseudotuberculosis IP 32953 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_068810.1 309858 D 273123 CDS YP_068811.1 51594620 2955526 311409..312110 1 NC_006155.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 312110 fre 2955526 fre Yersinia pseudotuberculosis IP 32953 FMN reductase YP_068811.1 311409 D 273123 CDS YP_068812.1 51594621 2955521 complement(312270..313433) 1 NC_006155.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 313433 fadA 2955521 fadA Yersinia pseudotuberculosis IP 32953 3-ketoacyl-CoA thiolase YP_068812.1 312270 R 273123 CDS YP_068813.1 51594622 2955522 complement(313445..315634) 1 NC_006155.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 315634 fadB 2955522 fadB Yersinia pseudotuberculosis IP 32953 multifunctional fatty acid oxidation complex subunit alpha YP_068813.1 313445 R 273123 CDS YP_068814.1 51594623 2956235 315961..317292 1 NC_006155.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 317292 pepQ 2956235 pepQ Yersinia pseudotuberculosis IP 32953 proline dipeptidase YP_068814.1 315961 D 273123 CDS YP_068815.1 51594624 2953147 317292..317903 1 NC_006155.1 similar to Escherichia coli ECs4776 hypothetical protein (64.8% evalue=4.E-71); Escherichia coli Z5370 yigZ; orf, hypothetical protein (64.8% evalue=4.E-71); hypothetical protein 317903 2953147 YPTB0269 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068815.1 317292 D 273123 CDS YP_068816.1 51594625 2956733 317943..319394 1 NC_006155.1 similar to Yersinia pestis YPO3762 trkH; Trk system potassium uptake protein TrkH (100% evalue=0); Escherichia coli ECs4777 potassium uptake protein (88.6% evalue=0); potassium transporter 319394 trkH 2956733 trkH Yersinia pseudotuberculosis IP 32953 potassium transporter YP_068816.1 317943 D 273123 CDS YP_068817.1 51594626 2955779 319416..319949 1 NC_006155.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 319949 hemG 2955779 hemG Yersinia pseudotuberculosis IP 32953 protoporphyrinogen oxidase YP_068817.1 319416 D 273123 CDS YP_068818.1 51594627 2956099 326089..327126 1 NC_006155.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 327126 murB 2956099 murB Yersinia pseudotuberculosis IP 32953 UDP-N-acetylenolpyruvoylglucosamine reductase YP_068818.1 326089 D 273123 CDS YP_068819.1 51594628 2955293 327123..328082 1 NC_006155.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 328082 birA 2955293 birA Yersinia pseudotuberculosis IP 32953 biotin--protein ligase YP_068819.1 327123 D 273123 CDS YP_068820.1 51594629 2955344 complement(328117..329067) 1 NC_006155.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 329067 coaA 2955344 coaA Yersinia pseudotuberculosis IP 32953 pantothenate kinase YP_068820.1 328117 R 273123 CDS YP_068821.1 51594630 2953148 complement(329278..329829) 1 NC_006155.1 similar to Yersinia pestis YPO3757 acetyltransferase (99.4% evalue=1.E-100); Pseudomonas aeruginosa PA1885 conserved hypothetical protein (42.2% evalue=2.E-25); acetyltransferase 329829 2953148 YPTB0275 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_068821.1 329278 R 273123 CDS YP_068822.1 51594631 2956842 330818..332002 1 NC_006155.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 332002 tuf 2956842 tuf Yersinia pseudotuberculosis IP 32953 elongation factor Tu YP_068822.1 330818 D 273123 CDS YP_068823.1 51594632 2956583 332253..332636 1 NC_006155.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 332636 secE 2956583 secE Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecE YP_068823.1 332253 D 273123 CDS YP_068824.1 51594633 2956183 332638..333183 1 NC_006155.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 333183 nusG 2956183 nusG Yersinia pseudotuberculosis IP 32953 transcription antitermination protein NusG YP_068824.1 332638 D 273123 CDS YP_068825.1 51594634 2956495 333374..333802 1 NC_006155.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 333802 rplK 2956495 rplK Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L11 YP_068825.1 333374 D 273123 CDS YP_068826.1 51594635 2956487 333806..334510 1 NC_006155.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 334510 rplA 2956487 rplA Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L1 YP_068826.1 333806 D 273123 CDS YP_068827.1 51594636 2956494 334875..335372 1 NC_006155.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 335372 rplJ 2956494 rplJ Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L10 YP_068827.1 334875 D 273123 CDS YP_068828.1 51594637 2956496 335439..335807 1 NC_006155.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 335807 rplL 2956496 rplL Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L7/L12 YP_068828.1 335439 D 273123 CDS YP_068829.1 51594638 2956521 336150..340178 1 NC_006155.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 340178 rpoB 2956521 rpoB Yersinia pseudotuberculosis IP 32953 DNA-directed RNA polymerase subunit beta YP_068829.1 336150 D 273123 CDS YP_068830.1 51594639 2956522 340307..344527 1 NC_006155.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 344527 rpoC 2956522 rpoC Yersinia pseudotuberculosis IP 32953 DNA-directed RNA polymerase subunit beta' YP_068830.1 340307 D 273123 CDS YP_068831.1 51594640 2956693 complement(344833..345963) 1 NC_006155.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 345963 thiH 2956693 thiH Yersinia pseudotuberculosis IP 32953 thiamine biosynthesis protein ThiH YP_068831.1 344833 R 273123 CDS YP_068832.1 51594641 2956692 complement(345956..346771) 1 NC_006155.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 346771 thiG 2956692 thiG Yersinia pseudotuberculosis IP 32953 thiazole synthase YP_068832.1 345956 R 273123 CDS YP_068833.1 51594642 2956699 complement(346773..346988) 1 NC_006155.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 346988 thiS 2956699 thiS Yersinia pseudotuberculosis IP 32953 sulfur carrier protein ThiS YP_068833.1 346773 R 273123 CDS YP_068834.1 51594643 2956691 complement(346985..347782) 1 NC_006155.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 347782 thiF 2956691 thiF Yersinia pseudotuberculosis IP 32953 thiamine biosynthesis protein ThiF YP_068834.1 346985 R 273123 CDS YP_068835.1 51594644 2956690 complement(347772..348419) 1 NC_006155.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 348419 thiE 2956690 thiE Yersinia pseudotuberculosis IP 32953 thiamine-phosphate pyrophosphorylase YP_068835.1 347772 R 273123 CDS YP_068836.1 51594645 2956688 complement(348433..350478) 1 NC_006155.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 350478 thiC 2956688 thiC Yersinia pseudotuberculosis IP 32953 thiamine biosynthesis protein ThiC YP_068836.1 348433 R 273123 CDS YP_068837.1 51594646 2956552 complement(350853..351362) 1 NC_006155.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 351362 rsd 2956552 rsd Yersinia pseudotuberculosis IP 32953 anti-RNA polymerase sigma 70 factor YP_068837.1 350853 R 273123 CDS YP_068838.1 51594647 2953149 351459..352241 1 NC_006155.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 352241 nudC 2953149 nudC Yersinia pseudotuberculosis IP 32953 NADH pyrophosphatase YP_068838.1 351459 D 273123 CDS YP_068839.1 51594648 2953150 352334..353119 1 NC_006155.1 similar to Yersinia pestis YPO3735 hypothetical protein (100% evalue=1.E-139); hypothetical protein 353119 2953150 YPTB0293 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068839.1 352334 D 273123 CDS YP_068840.1 51594649 2955777 353238..354305 1 NC_006155.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 354305 hemE 2955777 hemE Yersinia pseudotuberculosis IP 32953 uroporphyrinogen decarboxylase YP_068840.1 353238 D 273123 CDS YP_068841.1 51594650 2956135 354371..355075 1 NC_006155.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 355075 nfi 2956135 nfi Yersinia pseudotuberculosis IP 32953 endonuclease V YP_068841.1 354371 D 273123 CDS YP_068842.1 51594651 2953151 355121..355711 1 NC_006155.1 similar to Yersinia pestis YPO3732 conserved hypothetical protein (99.4% evalue=1.E-109); Salmonella typhi STY3716 yjaG; conserved hypothetical protein (80.6% evalue=4.E-91); hypothetical protein 355711 2953151 YPTB0296 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068842.1 355121 D 273123 CDS YP_068843.1 51594652 2955849 355900..356175 1 NC_006155.1 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 356175 hupA 2955849 hupA Yersinia pseudotuberculosis IP 32953 transcriptional regulator HU subunit alpha YP_068843.1 355900 D 273123 CDS YP_068844.1 51594653 2957080 356177..356878 1 NC_006155.1 similar to Yersinia pestis YPO3730 yjaH; exported protein (99.5% evalue=1.E-121); Salmonella typhimurium STM4171 yjaH; inner membrane protein (42.5% evalue=5.E-43); hypothetical protein 356878 yjaH 2957080 yjaH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068844.1 356177 D 273123 CDS YP_068845.1 51594654 2956369 complement(357064..358350) 1 NC_006155.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 358350 purD 2956369 purD Yersinia pseudotuberculosis IP 32953 phosphoribosylamine--glycine ligase YP_068845.1 357064 R 273123 CDS YP_068846.1 51594655 2956372 complement(358410..359999) 1 NC_006155.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 359999 purH 2956372 purH Yersinia pseudotuberculosis IP 32953 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_068846.1 358410 R 273123 CDS YP_068847.1 51594656 2953152 366224..366490 1 NC_006155.1 similar to Yersinia pestis YPCD1.93 transposase (100% evalue=2.E-44); Ralstonia solanacearum RS00015 tISRso12a, RSc2707; ISRSO12-transposase orfA protein (79.3% evalue=2.E-34); hypothetical protein 366490 2953152 YPTB0301 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068847.1 366224 D 273123 CDS YP_068848.1 51594657 2953153 366568..367323 1 NC_006155.1 similar to Yersinia pestis YPCD1.94 transposase (99.2% evalue=1.E-146); transposase 367323 2953153 YPTB0302 Yersinia pseudotuberculosis IP 32953 transposase YP_068848.1 366568 D 273123 CDS YP_068849.1 51594658 2953154 complement(367716..368495) 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 368495 2953154 YPTB0303 Yersinia pseudotuberculosis IP 32953 transposase/IS protein YP_068849.1 367716 R 273123 CDS YP_068850.1 51594659 2953155 complement(368495..369517) 1 NC_006155.1 similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 369517 2953155 YPTB0304 Yersinia pseudotuberculosis IP 32953 transposase YP_068850.1 368495 R 273123 CDS YP_068851.1 51594660 2957123 369677..370834 1 NC_006155.1 similar to Bacillus subtilis BG11786 ytaP; hypothetical protein (28.9% evalue=5.E-26); hypothetical protein 370834 ytaP 2957123 ytaP Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068851.1 369677 D 273123 CDS YP_068852.1 51594661 2956247 complement(370908..372563) 1 NC_006155.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 372563 actP 2956247 actP Yersinia pseudotuberculosis IP 32953 acetate permease YP_068852.1 370908 R 273123 CDS YP_068853.1 51594662 2953156 complement(372560..372871) 1 NC_006155.1 similar to Yersinia pestis YPO0252 membrane protein (100% evalue=3.E-53); Salmonella typhimurium STM4274 yjcH; inner membrane protein (66.6% evalue=2.E-35); hypothetical protein 372871 2953156 YPTB0307 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068853.1 372560 R 273123 CDS YP_068854.1 51594663 2956405 complement(372928..374886) 1 NC_006155.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 374886 rcs 2956405 rcs Yersinia pseudotuberculosis IP 32953 acetyl-CoA synthetase YP_068854.1 372928 R 273123 CDS YP_068855.1 51594664 2955722 375741..377057 1 NC_006155.1 carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system; glutamate/aspartate:proton symporter 377057 gltP 2955722 gltP Yersinia pseudotuberculosis IP 32953 glutamate/aspartate:proton symporter YP_068855.1 375741 D 273123 CDS YP_068856.1 51594665 2953157 complement(377235..377867) 1 NC_006155.1 similar to Yersinia pestis YPO0255 two-component response regulator (98% evalue=1.E-113); Salmonella typhimurium STM1391 ssrB; Secretion system regulator: transcriptonal activator, homologous with degU/uvrY/bvgA (54.6% evalue=3.E-57); two-component response regulator 377867 2953157 YPTB0310 Yersinia pseudotuberculosis IP 32953 two-component response regulator YP_068856.1 377235 R 273123 CDS YP_068857.1 51594666 2953158 complement(377880..380699) 1 NC_006155.1 similar to Yersinia pestis YPO0256 two-component sensor/regulator (98.8% evalue=0); Salmonella typhi STY1728 ssrA, spiR; two-component sensor kinase (44.1% evalue=0); two-component sensor/regulator 380699 2953158 YPTB0311 Yersinia pseudotuberculosis IP 32953 two-component sensor/regulator YP_068857.1 377880 R 273123 CDS YP_068858.1 51594667 2953159 380872..382443 1 NC_006155.1 similar to Yersinia pestis YPO0257 possible type III secretion protein (99.8% evalue=0); Salmonella typhimurium STM1394 ssaC; Secretion system apparatus (51.5% evalue=1.E-138); type III secretion protein EscC/SpiA, outer membrane pore 382443 2953159 YPTB0312 Yersinia pseudotuberculosis IP 32953 type III secretion protein EscC/SpiA, outer membrane pore YP_068858.1 380872 D 273123 CDS YP_068859.1 51594668 2953160 382445..383659 1 NC_006155.1 similar to Yersinia pestis YPO0258 type-III secretion protein (99.7% evalue=0); Salmonella typhi STY1725 ssaD; pathogenicity island protein (31% evalue=4.E-52); type-III secretion protein, EscD/SpiB 383659 2953160 YPTB0313 Yersinia pseudotuberculosis IP 32953 type-III secretion protein, EscD/SpiB YP_068859.1 382445 D 273123 CDS YP_068860.1 51594669 2953161 383678..383899 1 NC_006155.1 similar to Yersinia pestis YP0259 type III secretion apparatus; hypothetical protein 383899 2953161 YPTB0314 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068860.1 383678 D 273123 CDS YP_068861.1 51594670 2953162 383934..384713 1 NC_006155.1 similar to Yersinia pestis YPO0260 AraC-family regulatory protein (99.5% evalue=1.E-115); AraC family transcriptional regulator 384713 2953162 YPTB0315 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_068861.1 383934 D 273123 CDS YP_068862.1 51594671 2953163 384723..384938 1 NC_006155.1 similar to Yersinia pestis YPO0260a type III secretion apparatus (95.7% evalue=6.E-32); type III secretion apparatus 384938 2953163 YPTB0316 Yersinia pseudotuberculosis IP 32953 type III secretion apparatus YP_068862.1 384723 D 273123 CDS YP_068863.1 51594672 2953164 384935..385183 1 NC_006155.1 similar to Yersinia pestis YPO0261 type III secretion apparatus (100% evalue=5.E-39); type III secretion apparatus 385183 2953164 YPTB0317 Yersinia pseudotuberculosis IP 32953 type III secretion apparatus YP_068863.1 384935 D 273123 CDS YP_068864.1 51594673 2953165 385281..385532 1 NC_006155.1 similar to Yersinia pestis YPO0262 type III secretion apparatus (100% evalue=2.E-40); type III secretion apparatus 385532 2953165 YPTB0318 Yersinia pseudotuberculosis IP 32953 type III secretion apparatus YP_068864.1 385281 D 273123 CDS YP_068865.1 51594674 2953166 385529..386260 1 NC_006155.1 similar to Yersinia pestis YPO0263 type III secretion system apparatus lipoprotein (99.5% evalue=1.E-133); Salmonella typhi STY1711 ssaJ; pathogenicity island lipoprotein (45.3% evalue=9.E-56); type III secretion system apparatus lipoprotein, EscJ/SsaJ 386260 2953166 YPTB0319 Yersinia pseudotuberculosis IP 32953 type III secretion system apparatus lipoprotein, EscJ/SsaJ YP_068865.1 385529 D 273123 CDS YP_068866.1 51594675 2953167 386455..387048 1 NC_006155.1 similar to Yersinia pestis YPO0264 conserved hypothetical protein (100% evalue=1.E-110); Salmonella typhi STY1710 pathogenicity island protein (34.7% evalue=2.E-18); hypothetical protein 387048 2953167 YPTB0320 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068866.1 386455 D 273123 CDS YP_068867.1 51594676 2953168 387045..387692 1 NC_006155.1 similar to Yersinia pestis YPO0265 type III secretion system apparatus protein (97.2% evalue=1.E-114); Salmonella typhimurium STM1411 ssaK; Secretion system apparatus (27.4% evalue=2.E-14); type III secretion system apparatus protein 387692 2953168 YPTB0321 Yersinia pseudotuberculosis IP 32953 type III secretion system apparatus protein YP_068867.1 387045 D 273123 CDS YP_068868.1 51594677 2953169 387685..389733 1 NC_006155.1 with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system; secretion system apparatus protein SsaV 389733 2953169 YPTB0322 Yersinia pseudotuberculosis IP 32953 secretion system apparatus protein SsaV YP_068868.1 387685 D 273123 CDS YP_068869.1 51594678 2953170 389720..391057 1 NC_006155.1 similar to Yersinia pestis YPO0267 type III secretion system ATP synthase (100% evalue=0); Salmonella typhi STY1705 ssaN; type III secretion ATP synthase (59.4% evalue=1.E-133); type III secretion system ATPase 391057 2953170 YPTB0323 Yersinia pseudotuberculosis IP 32953 type III secretion system ATPase YP_068869.1 389720 D 273123 CDS YP_068870.1 51594679 2953171 391054..391455 1 NC_006155.1 similar to Yersinia pestis YPO0268 type III secretion system apparatus protein (99.2% evalue=1.E-70); M. musculus 108655 Foxp1, 4932443N09Rik; forkhead box P1 (28.6% evalue=1.E-08); type III secretion system apparatus protein 391455 2953171 YPTB0324 Yersinia pseudotuberculosis IP 32953 type III secretion system apparatus protein YP_068870.1 391054 D 273123 CDS YP_068871.1 51594680 2953172 391619..391834 1 NC_006155.1 similar to Yersinia pestis YPO0268a hypothetical protein (98.5% evalue=3.E-35); hypothetical protein 391834 2953172 YPTB0325 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068871.1 391619 D 273123 CDS YP_068872.1 51594681 2953173 391854..392774 1 NC_006155.1 similar to Yersinia pestis YPO0269 type III secretion system apparatus protein (98% evalue=1.E-176); Salmonella typhimurium STM1418 ssaQ; Secretion system apparatus (26.4% evalue=2.E-25); type III secretion system protein 392774 2953173 YPTB0326 Yersinia pseudotuberculosis IP 32953 type III secretion system protein YP_068872.1 391854 D 273123 CDS YP_068873.2 161760592 2953174 392841..393551 1 NC_006155.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 393551 2953174 YPTB0327 Yersinia pseudotuberculosis IP 32953 type III secretion system protein YP_068873.2 392841 D 273123 CDS YP_068874.1 51594683 2953175 393548..393841 1 NC_006155.1 similar to Yersinia pestis YPO0271 type III secretion apparatus protein (100% evalue=4.E-48); Salmonella typhimurium STM1420 ssaS; Secretion system apparatus: homology with YscS of the secretion system of Yersinia (60.7% evalue=1.E-22); type III secretion apparatus protein EscS/SsaS/YscS 393841 2953175 YPTB0328 Yersinia pseudotuberculosis IP 32953 type III secretion apparatus protein EscS/SsaS/YscS YP_068874.1 393548 D 273123 CDS YP_068875.1 51594684 2953176 393843..394637 1 NC_006155.1 similar to Yersinia pestis YPO0272 type III secretion apparatus protein (100% evalue=1.E-145); Salmonella typhi STY1699 ssaT; type III secretion protein (51.7% evalue=2.E-66); type III secretion apparatus protein EscT/SsaT/YscT 394637 2953176 YPTB0329 Yersinia pseudotuberculosis IP 32953 type III secretion apparatus protein EscT/SsaT/YscT YP_068875.1 393843 D 273123 CDS YP_068876.1 51594685 2953177 394627..395694 1 NC_006155.1 member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli; secretion system apparatus protein SsaU 395694 2953177 YPTB0330 Yersinia pseudotuberculosis IP 32953 secretion system apparatus protein SsaU YP_068876.1 394627 D 273123 CDS YP_068877.1 51594686 2953178 396077..397291 1 NC_006155.1 similar to Yersinia pestis YPO0274 integral membrane protein (100% evalue=0); Escherichia coli b1929 yedE; hypothetical 44.4 kD protein in amyA-fliE intergenic region (ORF 48) (78.3% evalue=0); hypothetical protein 397291 2953178 YPTB0331 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068877.1 396077 D 273123 CDS YP_068878.1 51594687 2953179 397288..397557 1 NC_006155.1 similar to Yersinia pestis YPO0275 conserved hypothetical protein (98.8% evalue=3.E-47); Escherichia coli b1930 yedF; hypothetical 8.6 kD protein in amyA-fliE intergenic region (ORF 9) (93.2% evalue=3.E-36); hypothetical protein 397557 2953179 YPTB0332 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068878.1 397288 D 273123 CDS YP_068879.1 51594688 2953180 complement(397635..398621) 1 NC_006155.1 similar to Yersinia pestis YPO0276 LysR-family transcriptional regulator (100% evalue=0); Ralstonia solanacearum RS01682 probable transcription regulator protein (31% evalue=2.E-42); LysR family transcriptional regulator 398621 2953180 YPTB0333 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_068879.1 397635 R 273123 CDS YP_068880.1 51594689 2953181 398788..400074 1 NC_006155.1 similar to Yersinia pestis YPO0277 transmembrane transport protein (100% evalue=0); Escherichia coli b3539 yhjV; hypothetical 47.3 kD protein in dctA-dppF intergenic region (O423) (62.6% evalue=1.E-157); HAAAP (hydroxy/aromatic amino acid permease) family protein 400074 2953181 YPTB0334 Yersinia pseudotuberculosis IP 32953 HAAAP (hydroxy/aromatic amino acid permease) family protein YP_068880.1 398788 D 273123 CDS YP_068881.1 51594690 2956021 400120..401301 1 NC_006155.1 similar to Yersinia pestis YPO0278 metC; cystathionine beta-lyase (100% evalue=0); Saccharomyces cerevisiae YFR055W cystathionine beta-lyase (64.1% evalue=1.E-131); cystathionine beta-lyase 401301 metC 2956021 metC Yersinia pseudotuberculosis IP 32953 cystathionine beta-lyase YP_068881.1 400120 D 273123 CDS YP_068882.1 51594691 2955814 complement(401442..402242) 1 NC_006155.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 402242 hmuV 2955814 hmuV Yersinia pseudotuberculosis IP 32953 hemin importer ATP-binding subunit YP_068882.1 401442 R 273123 CDS YP_068883.1 51594692 2955813 complement(402235..403239) 1 NC_006155.1 similar to Yersinia pestis YPO0280 hmuU; hemin transport system permease HmuU (100% evalue=0); Escherichia coli Z4918 chuU; permease of iron compound ABC transport system (66.5% evalue=1.E-115); hemin ABC transporter permease HmuU 403239 hmuU 2955813 hmuU Yersinia pseudotuberculosis IP 32953 hemin ABC transporter permease HmuU YP_068883.1 402235 R 273123 CDS YP_068884.1 51594693 2955812 complement(403236..404075) 1 NC_006155.1 similar to Yersinia pestis YPO0281 hmuT; hemin-binding periplasmic protein (99.2% evalue=1.E-150); Agrobacterium tumefaciens AGR_C_4467 hemin-binding periplasmic protein HmuT precursor (41.7% evalue=6.E-44); hemin-ABC transporter substrate-binding protein hmuT 404075 hmuT 2955812 hmuT Yersinia pseudotuberculosis IP 32953 hemin-ABC transporter substrate-binding protein hmuT YP_068884.1 403236 R 273123 CDS YP_068885.1 51594694 2955811 complement(404072..405109) 1 NC_006155.1 similar to Yersinia pestis YPO0282 hmuS; hemin transport protein (100% evalue=0); Escherichia coli ECs4379 hypothetical protein (67% evalue=1.E-130); hemin degradation/transport protein hmuS 405109 hmuS 2955811 hmuS Yersinia pseudotuberculosis IP 32953 hemin degradation/transport protein hmuS YP_068885.1 404072 R 273123 CDS YP_068886.1 51594695 2955810 complement(405228..407258) 1 NC_006155.1 similar to Yersinia pestis YPO0283 hmuR; hemin receptor precursor (99.4% evalue=0); Escherichia coli ECs4380 heme utilization/transport protein (67.8% evalue=0); tonB dependent outer membrane hemin receptor, hmuR 407258 hmuR 2955810 hmuR Yersinia pseudotuberculosis IP 32953 tonB dependent outer membrane hemin receptor, hmuR YP_068886.1 405228 R 273123 CDS YP_068887.1 51594696 2953182 complement(407389..407580) 1 NC_006155.1 hemin uptake protein HEMP 407580 2953182 YPTB0341 Yersinia pseudotuberculosis IP 32953 hemin uptake protein HEMP YP_068887.1 407389 R 273123 CDS YP_068888.1 51594697 2953183 complement(407666..408316) 1 NC_006155.1 similar to Yersinia pestis YPO0284 conserved hypothetical protein (99.5% evalue=1.E-120); Escherichia coli ECs4385 ShuY-like protein (55.4% evalue=2.E-55); hypothetical protein 408316 2953183 YPTB0342 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068888.1 407666 R 273123 CDS YP_068889.1 51594698 2953184 complement(408350..408913) 1 NC_006155.1 similar to Yersinia pestis YPO0285 conserved hypothetical protein (98.3% evalue=5.E-99); Escherichia coli ECs4384 ShuX-like protein (59.3% evalue=1.E-53); hypothetical protein 408913 2953184 YPTB0343 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068889.1 408350 R 273123 CDS YP_068890.1 51594699 2953185 complement(408910..410223) 1 NC_006155.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 410223 2953185 YPTB0344 Yersinia pseudotuberculosis IP 32953 coproporphyrinogen III oxidase YP_068890.1 408910 R 273123 CDS YP_068891.1 51594700 2953186 complement(410564..411364) 1 NC_006155.1 similar to Yersinia pestis YPO0287 methylenetetrahydrofolate reductase (99.6% evalue=1.E-153); Pseudomonas aeruginosa PA0430 metF; 5,10-methylenetetrahydrofolate reductase (25.2% evalue=1.E-21); methylenetetrahydrofolate reductase 411364 2953186 YPTB0345 Yersinia pseudotuberculosis IP 32953 methylenetetrahydrofolate reductase YP_068891.1 410564 R 273123 CDS YP_068892.1 51594701 2953187 complement(411679..412167) 1 NC_006155.1 similar to Yersinia pestis YPO0288 exported protein (100% evalue=9.E-85); Escherichia coli Z1603 terW_2; unknown associated with tellurite resistance (51.6% evalue=7.E-34); hypothetical protein 412167 2953187 YPTB0346 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068892.1 411679 R 273123 CDS YP_068893.1 51594702 2953188 complement(412564..413523) 1 NC_006155.1 similar to Yersinia pestis YPO0289 ATP/GTP-binding protein (100% evalue=1.E-173); Escherichia coli Z1605 hypothetical protein (66.7% evalue=1.E-111); ATP/GTP-binding protein 413523 2953188 YPTB0347 Yersinia pseudotuberculosis IP 32953 ATP/GTP-binding protein YP_068893.1 412564 R 273123 CDS YP_068894.1 51594703 2953189 complement(413523..414602) 1 NC_006155.1 similar to Yersinia pestis YPO0290 conserved hypothetical protein (100% evalue=0); Escherichia coli Z1606 hypothetical protein (70.5% evalue=1.E-144); hypothetical protein 414602 2953189 YPTB0348 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068894.1 413523 R 273123 CDS YP_068895.1 51594704 2953190 complement(414595..415407) 1 NC_006155.1 similar to Yersinia pestis YPO0291 conserved hypothetical protein (100% evalue=1.E-160); Escherichia coli Z1607 hypothetical protein (65.4% evalue=1.E-102); hypothetical protein 415407 2953190 YPTB0349 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068895.1 414595 R 273123 CDS YP_068896.1 51594705 2953191 complement(415400..416536) 1 NC_006155.1 similar to Yersinia pestis YPO0292 conserved hypothetical protein (100% evalue=0); Escherichia coli Z1608 hypothetical protein (68.2% evalue=1.E-145); hypothetical protein 416536 2953191 YPTB0350 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068896.1 415400 R 273123 CDS YP_068897.1 51594706 2953192 complement(416548..417609) 1 NC_006155.1 similar to Yersinia pestis YPO0293 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs1350 hypothetical protein (55.1% evalue=1.E-106); hypothetical protein 417609 2953192 YPTB0351 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068897.1 416548 R 273123 CDS YP_068898.1 51594707 2956683 417885..418478 1 NC_006155.1 similar to Yersinia pestis YPO0294 terZ; tellurium resistance protein (99.4% evalue=1.E-109); Escherichia coli ECs1351 tellurium resistance protein TerZ (76.6% evalue=2.E-82); tellurium resistance protein 418478 terZ 2956683 terZ Yersinia pseudotuberculosis IP 32953 tellurium resistance protein YP_068898.1 417885 D 273123 CDS YP_068899.1 51594708 2956676 418478..419662 1 NC_006155.1 similar to Yersinia pestis YPO0295 terA; tellurite resistance protein (99.7% evalue=0); Escherichia coli Z1172 terA; phage inhibition, colicin resistance and tellurite resistance protein (69.2% evalue=1.E-155); tellurite resistance protein 419662 terA 2956676 terA Yersinia pseudotuberculosis IP 32953 tellurite resistance protein YP_068899.1 418478 D 273123 CDS YP_068900.1 51594709 2956677 419695..420150 1 NC_006155.1 similar to Yersinia pestis YPO0296 terB; tellurite resistance protein (100% evalue=2.E-80); Escherichia coli ECs1353 tellurium resistance protein TerB (71.5% evalue=6.E-57); tellurite resistance protein 420150 terB 2956677 terB Yersinia pseudotuberculosis IP 32953 tellurite resistance protein YP_068900.1 419695 D 273123 CDS YP_068901.1 51594710 2956678 420172..421209 1 NC_006155.1 similar to Yersinia pestis YPO0297 terC; tellurium resistance protein (99.4% evalue=0); Escherichia coli Z1613 terC_2; phage inhibition, colicin resistance and tellurite resistance protein (83.9% evalue=1.E-164); tellurite resistance protein 421209 terC 2956678 terC Yersinia pseudotuberculosis IP 32953 tellurite resistance protein YP_068901.1 420172 D 273123 CDS YP_068902.1 51594711 2956679 421273..421851 1 NC_006155.1 similar to Yersinia pestis YPO0298 terD; tellurium resistance protein (100% evalue=1.E-106); Escherichia coli Z1614 terD_2; phage inhibition, colicin resistance and tellurite resistance protein (86.4% evalue=5.E-94); tellurium resistance protein 421851 terD 2956679 terD Yersinia pseudotuberculosis IP 32953 tellurium resistance protein YP_068902.1 421273 D 273123 CDS YP_068903.1 51594712 2956680 422035..422610 1 NC_006155.1 similar to Yersinia pestis YPO0299 terE; tellurium resistance protein (100% evalue=1.E-105); Escherichia coli Z1615 terE_2; phage inhibition, colicin resistance and tellurite resistance protein (85.3% evalue=4.E-91); tellurium resistance protein 422610 terE 2956680 terE Yersinia pseudotuberculosis IP 32953 tellurium resistance protein YP_068903.1 422035 D 273123 CDS YP_068904.1 51594713 2953193 423323..423961 1 NC_006155.1 similar to Yersinia pestis YPO0301 exported protein (100% evalue=1.E-115); Salmonella typhimurium STM4574 outer membrane protein (23.8% evalue=8.E-09); hypothetical protein 423961 2953193 YPTB0358 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068904.1 423323 D 273123 CDS YP_068905.1 51594714 2953194 424212..426590 1 NC_006155.1 similar to Yersinia pestis YPO0302 outer membrane fimbrial usher protein (99.6% evalue=0); Escherichia coli b3216 yhcD; hypothetical outer membrane usher protein in gltF-nanT intergenic region precursor (27.2% evalue=8.E-80); outer membrane fimbrial usher protein 426590 2953194 YPTB0359 Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher protein YP_068905.1 424212 D 273123 CDS YP_068906.1 51594715 2953195 426662..427405 1 NC_006155.1 member of the periplasmic pilus chaperone family of proteins; periplasmic chaperone protein 427405 2953195 YPTB0360 Yersinia pseudotuberculosis IP 32953 periplasmic chaperone protein YP_068906.1 426662 D 273123 CDS YP_068907.1 51594716 2953197 428763..430181 1 NC_006155.1 similar to Yersinia pestis YPO0306 hypothetical protein (99.7% evalue=0); hypothetical protein 430181 2953197 YPTB0362 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068907.1 428763 D 273123 CDS YP_068908.1 51594717 2953198 complement(430201..430476) 1 NC_006155.1 similar to Salmonella typhimurium STM4155 inner membrane protein (32.5% evalue=2.E-07); hypothetical protein 430476 2953198 YPTB0363 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068908.1 430201 R 273123 CDS YP_068909.1 51594718 2953199 431190..433247 1 NC_006155.1 similar to Yersinia pestis YPO0308 oxidoreductase (99.7% evalue=0); Ralstonia solanacearum RS01873 conserved hypothetical protein (42.8% evalue=1.E-102); oxidoreductase 433247 2953199 YPTB0364 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_068909.1 431190 D 273123 CDS YP_068910.1 51594719 2953200 complement(433591..437385) 1 NC_006155.1 similar to Yersinia pestis YPO1672 conserved hypothetical protein (79.7% evalue=0); autotransporter protein 437385 2953200 YPTB0365 Yersinia pseudotuberculosis IP 32953 autotransporter protein YP_068910.1 433591 R 273123 CDS YP_068911.1 51594720 2956851 438217..438741 1 NC_006155.1 catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 438741 ubiC 2956851 ubiC Yersinia pseudotuberculosis IP 32953 chorismate pyruvate lyase YP_068911.1 438217 D 273123 CDS YP_068912.1 51594721 2956850 438907..439773 1 NC_006155.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 439773 ubiA 2956850 ubiA Yersinia pseudotuberculosis IP 32953 4-hydroxybenzoate octaprenyltransferase YP_068912.1 438907 D 273123 CDS YP_068913.1 51594722 2956340 complement(439954..442458) 1 NC_006155.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 442458 pslB 2956340 pslB Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate acyltransferase YP_068913.1 439954 R 273123 CDS YP_068914.1 51594723 2955456 442586..442957 1 NC_006155.1 similar to Yersinia pestis YPO0313 dgkA; diacylglycerol kinase (100% evalue=9.E-63); Escherichia coli ECs5025 diacylglycerol kinase (68.3% evalue=1.E-42); diacylglycerol kinase 442957 dgkA 2955456 dgkA Yersinia pseudotuberculosis IP 32953 diacylglycerol kinase YP_068914.1 442586 D 273123 CDS YP_068915.1 51594724 2955945 443082..443690 1 NC_006155.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 443690 lexA 2955945 lexA Yersinia pseudotuberculosis IP 32953 LexA repressor YP_068915.1 443082 D 273123 CDS YP_068916.1 51594725 2953201 complement(443899..444408) 1 NC_006155.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 444408 2953201 YPTB0371 Yersinia pseudotuberculosis IP 32953 zinc uptake transcriptional repressor YP_068916.1 443899 R 273123 CDS YP_068917.1 51594726 2953202 444663..445700 1 NC_006155.1 similar to Yersinia pestis YPO0316 conserved hypothetical protein (99.7% evalue=0); Salmonella typhi STY4439 yjbN; conserved hypothetical protein (77.7% evalue=1.E-149); tRNA-dihydrouridine synthase A 445700 2953202 YPTB0372 Yersinia pseudotuberculosis IP 32953 tRNA-dihydrouridine synthase A YP_068917.1 444663 D 273123 CDS YP_068918.1 51594727 2953203 446216..446434 1 NC_006155.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 446434 pspG 2953203 pspG Yersinia pseudotuberculosis IP 32953 phage shock protein G YP_068918.1 446216 D 273123 CDS YP_068919.1 51594728 2956395 complement(446779..447762) 1 NC_006155.1 similar to Yersinia pestis YPO0319 qor, hcz; quinone oxidoreductase (99.6% evalue=0); Salmonella typhi STY4441 qor; quinone oxidoreductase (73.7% evalue=1.E-136); quinone oxidoreductase 447762 qor 2956395 qor Yersinia pseudotuberculosis IP 32953 quinone oxidoreductase YP_068919.1 446779 R 273123 CDS YP_068920.1 51594729 2955471 448094..449500 1 NC_006155.1 unwinds double stranded DNA; replicative DNA helicase 449500 dnaB 2955471 dnaB Yersinia pseudotuberculosis IP 32953 replicative DNA helicase YP_068920.1 448094 D 273123 CDS YP_068921.1 51594730 2955187 449597..450676 1 NC_006155.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 450676 alr 2955187 alr Yersinia pseudotuberculosis IP 32953 alanine racemase YP_068921.1 449597 D 273123 CDS YP_068922.1 51594731 2956846 450862..452055 1 NC_006155.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 452055 tyrB 2956846 tyrB Yersinia pseudotuberculosis IP 32953 aromatic amino acid aminotransferase YP_068922.1 450862 D 273123 CDS YP_068923.1 51594732 2953204 452582..452941 1 NC_006155.1 similar to Yersinia pestis YPO0323 conserved hypothetical protein (100% evalue=3.E-66); Escherichia coli JW4018 yjbR; Hypothetical protein (57.5% evalue=5.E-35); hypothetical protein 452941 2953204 YPTB0378 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068923.1 452582 D 273123 CDS YP_068924.1 51594733 2956881 complement(453034..455877) 1 NC_006155.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 455877 uvrA 2956881 uvrA Yersinia pseudotuberculosis IP 32953 excinuclease ABC subunit A YP_068924.1 453034 R 273123 CDS YP_068925.1 51594734 2956634 456318..456866 1 NC_006155.1 binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 456866 ssb 2956634 ssb Yersinia pseudotuberculosis IP 32953 single-stranded DNA-binding protein YP_068925.1 456318 D 273123 CDS YP_068926.1 51594735 2953205 complement(457114..457428) 1 NC_006155.1 similar to Yersinia pestis YPO0326 conserved hypothetical protein (100% evalue=3.E-58); Salmonella typhimurium STM4043 yiiL; cytoplasmic protein (77.8% evalue=1.E-45); hypothetical protein 457428 2953205 YPTB0381 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068926.1 457114 R 273123 CDS YP_068927.1 51594736 2953206 complement(457442..458590) 1 NC_006155.1 similar to Yersinia pestis YPO0327 probable alcohol dehydrogenase (99.4% evalue=0); Salmonella typhi STY3830 alcohol dehydrogenase (79.8% evalue=1.E-175); alcohol dehydrogenase 458590 2953206 YPTB0382 Yersinia pseudotuberculosis IP 32953 alcohol dehydrogenase YP_068927.1 457442 R 273123 CDS YP_068928.1 51594737 2956440 complement(458657..459481) 1 NC_006155.1 similar to Yersinia pestis YPO0328 rhaD; rhamnulose-1-phosphate aldolase (99.6% evalue=1.E-158); Escherichia coli b3902 rhaD; rhamnulose-1-phosphate aldolase (68% evalue=1.E-109); rhamnulose-1-phosphate aldolase 459481 rhaD 2956440 rhaD Yersinia pseudotuberculosis IP 32953 rhamnulose-1-phosphate aldolase YP_068928.1 458657 R 273123 CDS YP_068929.1 51594738 2956438 complement(459494..460750) 1 NC_006155.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 460750 rhaA 2956438 rhaA Yersinia pseudotuberculosis IP 32953 L-rhamnose isomerase YP_068929.1 459494 R 273123 CDS YP_068930.1 51594739 2956439 complement(460747..462204) 1 NC_006155.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase 462204 rhaB 2956439 rhaB Yersinia pseudotuberculosis IP 32953 rhamnulokinase YP_068930.1 460747 R 273123 CDS YP_068931.1 51594740 2956442 462601..463422 1 NC_006155.1 activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 463422 rhaS 2956442 rhaS Yersinia pseudotuberculosis IP 32953 transcriptional activator RhaS YP_068931.1 462601 D 273123 CDS YP_068932.1 51594741 2956441 463555..464427 1 NC_006155.1 activates the expression of rhaRS in response to L-rhamnose; transcriptional activator RhaR 464427 rhaR 2956441 rhaR Yersinia pseudotuberculosis IP 32953 transcriptional activator RhaR YP_068932.1 463555 D 273123 CDS YP_068933.1 51594742 2956443 complement(464576..465610) 1 NC_006155.1 transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter 465610 rhaT 2956443 rhaT Yersinia pseudotuberculosis IP 32953 rhamnose-proton symporter YP_068933.1 464576 R 273123 CDS YP_068934.1 51594743 2953207 465764..466054 1 NC_006155.1 similar to Yersinia pestis YPO0335 hypothetical protein (91.6% evalue=6.E-41); hypothetical protein 466054 2953207 YPTB0389 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068934.1 465764 D 273123 CDS YP_068935.1 51594744 2953209 complement(466490..466915) 1 NC_006155.1 similar to Yersinia pestis YPO0337 exported protein (100% evalue=9.E-81); Salmonella typhi STY1891 pertussis-like toxin subunit (46% evalue=2.E-27); hypothetical protein 466915 2953209 YPTB0391 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068935.1 466490 R 273123 CDS YP_068936.1 51594745 2953210 467145..467312 1 NC_006155.1 similar to Yersinia pestis YPO0338 hypothetical protein. 98% identical; hypothetical protein 467312 2953210 YPTB0392 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068936.1 467145 D 273123 CDS YP_068937.1 51594746 2953211 467327..469897 1 NC_006155.1 similar to Yersinia pestis YPO3828 hypothetical protein (30% evalue=6.E-15); enhancing factor 469897 2953211 YPTB0393 Yersinia pseudotuberculosis IP 32953 enhancing factor YP_068937.1 467327 D 273123 CDS YP_068938.1 51594747 2953213 complement(470551..471126) 1 NC_006155.1 similar to Yersinia pestis YPO0341 TetR-family regulatory protein (99.4% evalue=1.E-105); Escherichia coli ECs5116 hypothetical protein (64.9% evalue=2.E-67); transcriptional regulator 471126 2953213 YPTB0395 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_068938.1 470551 R 273123 CDS YP_068939.1 51594748 2953214 471546..473561 1 NC_006155.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit 473561 2953214 YPTB0396 Yersinia pseudotuberculosis IP 32953 oxidoreductase Fe-S binding subunit YP_068939.1 471546 D 273123 CDS YP_068940.1 51594749 2955858 473584..474141 1 NC_006155.1 similar to Yersinia pestis YPO0343 hydN; 4Fe-4S ferrodoxin (100% evalue=1.E-107); Salmonella typhimurium STM2843 hydN; electron transport protein (FeS senter) from formate to hydrogen (50.7% evalue=8.E-51); 4Fe-4S ferredoxin 474141 hydN 2955858 hydN Yersinia pseudotuberculosis IP 32953 4Fe-4S ferredoxin YP_068940.1 473584 D 273123 CDS YP_068941.1 51594750 2955536 474164..476311 1 NC_006155.1 similar to Yersinia pestis YPO0344 fdhF; formate dehydrogenase H (99.4% evalue=0); Escherichia coli b4079 fdhF; formate dehydrogenase , formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide (formate dehydrogenase-H alpha subunit) (62.9% evalue=0); formate dehydrogenase H 476311 fdhF 2955536 fdhF Yersinia pseudotuberculosis IP 32953 formate dehydrogenase H YP_068941.1 474164 D 273123 CDS YP_068942.1 51594751 2955489 complement(476373..478160) 1 NC_006155.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 478160 dipZ 2955489 dipZ Yersinia pseudotuberculosis IP 32953 thiol:disulfide interchange protein YP_068942.1 476373 R 273123 CDS YP_068943.1 51594752 2953215 complement(478136..478495) 1 NC_006155.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 478495 2953215 YPTB0400 Yersinia pseudotuberculosis IP 32953 divalent-cation tolerance protein CutA YP_068943.1 478136 R 273123 CDS YP_068944.1 51594753 2955435 complement(478680..479981) 1 NC_006155.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 479981 dcuA 2955435 dcuA Yersinia pseudotuberculosis IP 32953 anaerobic C4-dicarboxylate transporter YP_068944.1 478680 R 273123 CDS YP_068945.1 51594754 2955247 complement(480101..481537) 1 NC_006155.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 481537 aspA 2955247 aspA Yersinia pseudotuberculosis IP 32953 aspartate ammonia-lyase YP_068945.1 480101 R 273123 CDS YP_068946.1 51594755 2953216 481985..482563 1 NC_006155.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 482563 fxsA 2953216 fxsA Yersinia pseudotuberculosis IP 32953 FxsA protein YP_068946.1 481985 D 273123 CDS YP_068947.1 51594756 2955746 482818..483111 1 NC_006155.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 483111 groES 2955746 groES Yersinia pseudotuberculosis IP 32953 co-chaperonin GroES YP_068947.1 482818 D 273123 CDS YP_068948.1 51594757 2955745 483158..484804 1 NC_006155.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 484804 groEL 2955745 groEL Yersinia pseudotuberculosis IP 32953 molecular chaperone GroEL YP_068948.1 483158 D 273123 CDS YP_068949.1 51594758 2953217 485440..485826 1 NC_006155.1 similar to Yersinia pestis YPO0352 lipoprotein (99.2% evalue=2.E-66); Escherichia coli ECs5125 hypothetical protein (61.9% evalue=3.E-38); lipoprotein 485826 2953217 YPTB0406 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_068949.1 485440 D 273123 CDS YP_068950.1 51594759 2953218 complement(486111..487139) 1 NC_006155.1 similar to Yersinia pestis YPO0353 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM4333 yjeK; aminomutase (73.3% evalue=1.E-145); hypothetical protein 487139 2953218 YPTB0407 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068950.1 486111 R 273123 CDS YP_068951.1 51594760 2955497 487175..487741 1 NC_006155.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 487741 efp 2955497 efp Yersinia pseudotuberculosis IP 32953 elongation factor P YP_068951.1 487175 D 273123 CDS YP_068952.1 51594761 2956650 487988..488302 1 NC_006155.1 member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; quaternary ammonium compound-resistance protein SugE 488302 sugE 2956650 sugE Yersinia pseudotuberculosis IP 32953 quaternary ammonium compound-resistance protein SugE YP_068952.1 487988 D 273123 CDS YP_068953.1 51594762 2955641 complement(488467..488823) 1 NC_006155.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 488823 frdD 2955641 frdD Yersinia pseudotuberculosis IP 32953 fumarate reductase subunit D YP_068953.1 488467 R 273123 CDS YP_068954.1 51594763 2955640 complement(488840..489232) 1 NC_006155.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 489232 frdC 2955640 frdC Yersinia pseudotuberculosis IP 32953 fumarate reductase subunit C YP_068954.1 488840 R 273123 CDS YP_068955.1 51594764 2955639 complement(489249..489983) 1 NC_006155.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 489983 frdB 2955639 frdB Yersinia pseudotuberculosis IP 32953 fumarate reductase iron-sulfur subunit YP_068955.1 489249 R 273123 CDS YP_068956.1 51594765 2955638 complement(489976..491799) 1 NC_006155.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 491799 frdA 2955638 frdA Yersinia pseudotuberculosis IP 32953 fumarate reductase flavoprotein subunit YP_068956.1 489976 R 273123 CDS YP_068957.1 51594766 2956301 492257..493234 1 NC_006155.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 493234 poxA 2956301 poxA Yersinia pseudotuberculosis IP 32953 lysyl-tRNA synthetase YP_068957.1 492257 D 273123 CDS YP_068958.1 51594767 2955297 complement(493479..496838) 1 NC_006155.1 similar to Yersinia pestis YPO0363 membrane transport protein (99.5% evalue=0); Salmonella typhimurium STM4347 yjeP; periplasmic binding protein (70.1% evalue=0); hypothetical protein 496838 BspA 2955297 BspA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068958.1 493479 R 273123 CDS YP_068959.1 51594768 2956338 complement(496862..497743) 1 NC_006155.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 497743 psd 2956338 psd Yersinia pseudotuberculosis IP 32953 phosphatidylserine decarboxylase YP_068959.1 496862 R 273123 CDS YP_068960.1 51594769 2953219 complement(498068..499120) 1 NC_006155.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 499120 2953219 YPTB0417 Yersinia pseudotuberculosis IP 32953 ribosome-associated GTPase YP_068960.1 498068 R 273123 CDS YP_068961.1 51594770 2953220 499320..499865 1 NC_006155.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 499865 2953220 YPTB0418 Yersinia pseudotuberculosis IP 32953 oligoribonuclease YP_068961.1 499320 D 273123 CDS YP_068962.1 51594771 2953221 complement(501121..502356) 1 NC_006155.1 similar to Yersinia pestis YPO0367 iron-sulfur cluster-binding protein (100% evalue=0); Escherichia coli Z5773 yjeS; orf, hypothetical protein (74.6% evalue=0); (Fe-S)-binding protein 502356 2953221 YPTB0419 Yersinia pseudotuberculosis IP 32953 (Fe-S)-binding protein YP_068962.1 501121 R 273123 CDS YP_068963.1 51594772 2953222 502355..503869 1 NC_006155.1 similar to Yersinia pestis YPO0368 conserved hypothetical protein (99.8% evalue=0); Escherichia coli b4167 yjeF; hypothetical 54.7 kD protein in PSD-amiB intergenic region (URF1) (60.7% evalue=0); hypothetical protein 503869 2953222 YPTB0420 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068963.1 502355 D 273123 CDS YP_068964.1 51594773 2953223 503880..504350 1 NC_006155.1 possibly involved in cell wall synthesis; ATPase 504350 2953223 YPTB0421 Yersinia pseudotuberculosis IP 32953 ATPase YP_068964.1 503880 D 273123 CDS YP_068965.1 51594774 2953224 504490..506271 1 NC_006155.1 similar to Yersinia pestis YPO0370 N-acetylmuramoyl-L-alanine amidase-family protein (99.4% evalue=0); Escherichia coli ECs5145 N-acetylmuramoyl-l-alanine amidase II (62.8% evalue=1.E-145); N-acetylmuramoyl-L-alanine amidase 506271 2953224 YPTB0422 Yersinia pseudotuberculosis IP 32953 N-acetylmuramoyl-L-alanine amidase YP_068965.1 504490 D 273123 CDS YP_068966.1 51594775 2956107 506287..508194 1 NC_006155.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 508194 mutL 2956107 mutL Yersinia pseudotuberculosis IP 32953 DNA mismatch repair protein YP_068966.1 506287 D 273123 CDS YP_068967.1 51594776 2956041 508187..509128 1 NC_006155.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 509128 miaA 2956041 miaA Yersinia pseudotuberculosis IP 32953 tRNA delta(2)-isopentenylpyrophosphate transferase YP_068967.1 508187 D 273123 CDS YP_068968.1 51594777 2957096 509245..509550 1 NC_006155.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 509550 hfq 2957096 hfq Yersinia pseudotuberculosis IP 32953 RNA-binding protein Hfq YP_068968.1 509245 D 273123 CDS YP_068969.1 51594778 2955788 509649..510935 1 NC_006155.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 510935 hflX 2955788 hflX Yersinia pseudotuberculosis IP 32953 GTPase HflX YP_068969.1 509649 D 273123 CDS YP_068970.1 51594779 2955787 511176..512438 1 NC_006155.1 with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 512438 hflK 2955787 hflK Yersinia pseudotuberculosis IP 32953 FtsH protease regulator HflK YP_068970.1 511176 D 273123 CDS YP_068971.1 51594780 2955786 512442..513446 1 NC_006155.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 513446 hflC 2955786 hflC Yersinia pseudotuberculosis IP 32953 FtsH protease regulator HflC YP_068971.1 512442 D 273123 CDS YP_068972.1 51594781 2953225 513618..513818 1 NC_006155.1 similar to Yersinia pestis YPO0377 membrane protein (100% evalue=6.E-32); Escherichia coli JW4134 yjeT; Hypothetical protein (81.5% evalue=8.E-24); hypothetical protein 513818 2953225 YPTB0429 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068972.1 513618 D 273123 CDS YP_068973.1 51594782 2956366 513918..515216 1 NC_006155.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 515216 purA 2956366 purA Yersinia pseudotuberculosis IP 32953 adenylosuccinate synthetase YP_068973.1 513918 D 273123 CDS YP_068974.1 51594783 2953226 515605..516030 1 NC_006155.1 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 516030 2953226 YPTB0431 Yersinia pseudotuberculosis IP 32953 transcriptional repressor NsrR YP_068974.1 515605 D 273123 CDS YP_068975.1 51594784 2956475 516271..518805 1 NC_006155.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 518805 rnr 2956475 rnr Yersinia pseudotuberculosis IP 32953 exoribonuclease R YP_068975.1 516271 D 273123 CDS YP_068976.1 51594785 2953227 518924..519664 1 NC_006155.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 519664 2953227 YPTB0433 Yersinia pseudotuberculosis IP 32953 23S rRNA (guanosine-2'-O-)-methyltransferase YP_068976.1 518924 D 273123 CDS YP_068977.1 51594786 2955180 520072..521715 1 NC_006155.1 catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; isovaleryl CoA dehydrogenase 521715 aidB 2955180 aidB Yersinia pseudotuberculosis IP 32953 isovaleryl CoA dehydrogenase YP_068977.1 520072 D 273123 CDS YP_068978.1 51594787 2953228 complement(521825..522136) 1 NC_006155.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; biofilm stress and motility protein A 522136 2953228 YPTB0435 Yersinia pseudotuberculosis IP 32953 biofilm stress and motility protein A YP_068978.1 521825 R 273123 CDS YP_068979.1 51594788 2956459 522327..523076 1 NC_006155.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 523076 rjfP 2956459 rjfP Yersinia pseudotuberculosis IP 32953 esterase YP_068979.1 522327 D 273123 CDS YP_068980.1 51594789 2953229 523151..523429 1 NC_006155.1 similar to Yersinia pestis YPO3540 hypothetical protein. 98% identical.; hypothetical protein 523429 2953229 YPTB0437 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068980.1 523151 D 273123 CDS YP_068981.1 51594790 2956535 523443..523835 1 NC_006155.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 523835 rpsF 2956535 rpsF Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S6 YP_068981.1 523443 D 273123 CDS YP_068982.1 51594791 2956319 523841..524161 1 NC_006155.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 524161 priB 2956319 priB Yersinia pseudotuberculosis IP 32953 primosomal replication protein N YP_068982.1 523841 D 273123 CDS YP_068983.1 51594792 2956545 524166..524393 1 NC_006155.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 524393 rpsR 2956545 rpsR Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S18 YP_068983.1 524166 D 273123 CDS YP_068984.1 51594793 2956493 524433..524885 1 NC_006155.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 524885 rplI 2956493 rplI Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L9 YP_068984.1 524433 D 273123 CDS YP_068985.1 51594794 2953230 complement(524951..525406) 1 NC_006155.1 similar to Yersinia pestis YPO3534 exported protein (100% evalue=4.E-86); hypothetical protein 525406 2953230 YPTB0442 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068985.1 524951 R 273123 CDS YP_068986.1 51594795 2953231 complement(525546..526286) 1 NC_006155.1 similar to Yersinia pestis YPO3533 conserved hypothetical protein (100% evalue=1.E-141); Salmonella typhimurium STM4396 ytfB; cell envelope opacity-associated protein A (45.1% evalue=2.E-36); hypothetical protein 526286 2953231 YPTB0443 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068986.1 525546 R 273123 CDS YP_068987.1 51594796 2955551 526650..527270 1 NC_006155.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 527270 fklB 2955551 fklB Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase YP_068987.1 526650 D 273123 CDS YP_068988.1 51594797 2953232 complement(527368..528033) 1 NC_006155.1 Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 528033 2953232 YPTB0445 Yersinia pseudotuberculosis IP 32953 iron-sulfur cluster repair di-iron protein YP_068988.1 527368 R 273123 CDS YP_068989.1 51594798 2955352 complement(528162..530132) 1 NC_006155.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 530132 cpdB 2955352 cpdB Yersinia pseudotuberculosis IP 32953 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_068989.1 528162 R 273123 CDS YP_068990.1 51594799 2955413 530581..531324 1 NC_006155.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 531324 cysQ 2955413 cysQ Yersinia pseudotuberculosis IP 32953 adenosine-3'(2'),5'-bisphosphate nucleotidase YP_068990.1 530581 D 273123 CDS YP_068991.1 51594800 2953233 complement(531327..531890) 1 NC_006155.1 similar to Yersinia pestis YPO3528 exported protein (100% evalue=1.E-102); Salmonella typhi STY4763 ytfJ; exported protein (60.9% evalue=4.E-62); hypothetical protein 531890 2953233 YPTB0448 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068991.1 531327 R 273123 CDS YP_068992.1 51594801 2953234 532226..532438 1 NC_006155.1 similar to Yersinia pestis YPO3527 conserved hypothetical protein (100% evalue=5.E-34); Escherichia coli JW4176 ytfK; Hypothetical protein (77.2% evalue=3.E-24); hypothetical protein 532438 2953234 YPTB0449 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068992.1 532226 D 273123 CDS YP_068993.1 51594802 2953235 complement(532546..533877) 1 NC_006155.1 similar to Yersinia pestis YPO3526 membrane protein (100% evalue=0); Salmonella typhi STY4766 ytfL; membrane protein (81.3% evalue=0); CorC/HlyC family transporters 533877 2953235 YPTB0450 Yersinia pseudotuberculosis IP 32953 CorC/HlyC family transporters YP_068993.1 532546 R 273123 CDS YP_068994.1 51594803 2956087 complement(534155..534793) 1 NC_006155.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 534793 msrA 2956087 msrA Yersinia pseudotuberculosis IP 32953 methionine sulfoxide reductase A YP_068994.1 534155 R 273123 CDS YP_068995.1 51594804 2953236 535068..536804 1 NC_006155.1 similar to Yersinia pestis YPO3524 exported protein (99.6% evalue=0); Salmonella typhimurium STM4409 ytfM; outer membrane protein (71.1% evalue=0); hypothetical protein 536804 2953236 YPTB0452 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068995.1 535068 D 273123 CDS YP_068996.1 51594805 2953237 536801..540739 1 NC_006155.1 similar to Yersinia pestis YPO3523 exported protein (99.1% evalue=0); Salmonella typhi STY4769 ytfN; exported protein (56.8% evalue=0); hypothetical protein 540739 2953237 YPTB0453 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068996.1 536801 D 273123 CDS YP_068997.1 51594806 2953238 540742..541098 1 NC_006155.1 similar to Yersinia pestis YPO3522 conserved hypothetical protein (100% evalue=9.E-68); Escherichia coli JW4181 ytfP; Hypothetical protein (61.2% evalue=9.E-39); hypothetical protein 541098 2953238 YPTB0454 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_068997.1 540742 D 273123 CDS YP_068998.1 51594807 2956303 complement(541216..541743) 1 NC_006155.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 541743 ppa 2956303 ppa Yersinia pseudotuberculosis IP 32953 inorganic pyrophosphatase YP_068998.1 541216 R 273123 CDS YP_068999.1 51594808 2955531 complement(541943..542956) 1 NC_006155.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 542956 fbp 2955531 fbp Yersinia pseudotuberculosis IP 32953 fructose-1,6-bisphosphatase YP_068999.1 541943 R 273123 CDS YP_069000.1 51594809 2956072 543127..544512 1 NC_006155.1 similar to Yersinia pestis YPO3519 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (100% evalue=0); Escherichia coli Z5843 yjfG; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (84.4% evalue=0); UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopimelate ligase 544512 mpl 2956072 mpl Yersinia pseudotuberculosis IP 32953 UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopimelate ligase YP_069000.1 543127 D 273123 CDS YP_069001.1 51594810 2953239 complement(544808..545071) 1 NC_006155.1 similar to Yersinia pestis YPO3518 exported protein (100% evalue=7.E-43); Escherichia coli b3238 yhcN; hypothetical 11.2 kD protein in argR-cafA intergenic region (54% evalue=3.E-21); hypothetical protein 545071 2953239 YPTB0458 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069001.1 544808 R 273123 CDS YP_069002.1 51594811 2955219 complement(545460..545930) 1 NC_006155.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor ArgR 545930 argR 2955219 argR Yersinia pseudotuberculosis IP 32953 arginine repressor ArgR YP_069002.1 545460 R 273123 CDS YP_069003.1 51594812 2956006 546394..547332 1 NC_006155.1 oxidizes malate to oxaloacetate; malate dehydrogenase 547332 mdh 2956006 mdh Yersinia pseudotuberculosis IP 32953 malate dehydrogenase YP_069003.1 546394 D 273123 CDS YP_069004.1 51594813 2956601 complement(547766..548041) 1 NC_006155.1 similar to Yersinia pestis YPO2785 sfsB, nlp, sfs7; DNA-binding protein (73.9% evalue=2.E-26); Salmonella typhimurium STM2749 cytoplasmic protein (65% evalue=3.E-26); DNA-binding protein 548041 sfsB 2956601 sfsB Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_069004.1 547766 R 273123 CDS YP_069005.1 51594814 2953240 548171..548572 1 NC_006155.1 similar to Yersinia pestis YPO3514 conserved hypothetical protein (100% evalue=2.E-61); Salmonella typhimurium STM2373 cytoplasmic protein (33.6% evalue=6.E-08); hypothetical protein 548572 2953240 YPTB0462 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069005.1 548171 D 273123 CDS YP_069006.1 51594815 2955899 complement(548669..549640) 1 NC_006155.1 similar to Yersinia pestis YPO3513 ispB, cel; octaprenyl-diphosphate synthase (99.6% evalue=1.E-179); Salmonella typhimurium STM3305 ispB; octaprenyl diphosphate synthase (80.6% evalue=1.E-142); octaprenyl diphosphate synthase 549640 ispB 2955899 ispB Yersinia pseudotuberculosis IP 32953 octaprenyl diphosphate synthase YP_069006.1 548669 R 273123 CDS YP_069007.1 51594816 2956505 549900..550211 1 NC_006155.1 similar to Yersinia pestis YPO3512 rplU; 50S ribosomal protein L21 (100% evalue=5.E-54); Salmonella typhimurium STM3304 rplU; 50S ribosomal subunit protein L21 (89.3% evalue=9.E-50); 50S ribosomal protein L21 550211 rplU 2956505 rplU Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L21 YP_069007.1 549900 D 273123 CDS YP_069008.1 51594817 2956510 550231..550488 1 NC_006155.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 550488 rpmA 2956510 rpmA Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L27 YP_069008.1 550231 D 273123 CDS YP_069009.1 51594818 2953241 550576..551562 1 NC_006155.1 similar to Yersinia pestis YPO3510 membrane protein (100% evalue=0); Salmonella typhi STY3481 membrane protein (80.5% evalue=1.E-135); DMT family amino acid efflux protein 551562 2953241 YPTB0466 Yersinia pseudotuberculosis IP 32953 DMT family amino acid efflux protein YP_069009.1 550576 D 273123 CDS YP_069010.1 51594819 2953242 551563..552735 1 NC_006155.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 552735 obgE 2953242 obgE Yersinia pseudotuberculosis IP 32953 GTPase ObgE YP_069010.1 551563 D 273123 CDS YP_069011.1 51594820 2955273 complement(552830..553897) 1 NC_006155.1 similar to Yersinia pestis YPO3508 basS, pmrB; two-component system sensor protein (99.7% evalue=0); Salmonella typhimurium STM4291 basS; sensory kinase in two-component regulatory system with BasR (50.7% evalue=6.E-92); sensor protein BasS/PmrB 553897 basS 2955273 basS Yersinia pseudotuberculosis IP 32953 sensor protein BasS/PmrB YP_069011.1 552830 R 273123 CDS YP_069012.1 51594821 2955272 complement(553894..554556) 1 NC_006155.1 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 554556 basR 2955272 basR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator BasR YP_069012.1 553894 R 273123 CDS YP_069013.1 51594822 2955420 complement(554562..556010) 1 NC_006155.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase 556010 dacB 2955420 dacB Yersinia pseudotuberculosis IP 32953 D-alanyl-D-alanine carboxypeptidase YP_069013.1 554562 R 273123 CDS YP_069014.1 51594823 2955743 556268..556744 1 NC_006155.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 556744 greA 2955743 greA Yersinia pseudotuberculosis IP 32953 transcription elongation factor GreA YP_069014.1 556268 D 273123 CDS YP_069015.1 51594824 2953243 complement(556872..557165) 1 NC_006155.1 similar to Yersinia pestis YPO3504 conserved hypothetical protein (100% evalue=2.E-48); Salmonella typhimurium STM3298 yhbY; RNA-binding protein containing KH domain (83.5% evalue=7.E-40); hypothetical protein 557165 2953243 YPTB0472 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069015.1 556872 R 273123 CDS YP_069016.1 51594825 2955655 557312..557941 1 NC_006155.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase 557941 rrmJ 2955655 rrmJ Yersinia pseudotuberculosis IP 32953 23S rRNA methyltransferase YP_069016.1 557312 D 273123 CDS YP_069017.1 51594826 2955653 557998..559932 1 NC_006155.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 559932 hflB 2955653 hflB Yersinia pseudotuberculosis IP 32953 ATP-dependent metalloprotease YP_069017.1 557998 D 273123 CDS YP_069018.1 51594827 2955636 560052..560885 1 NC_006155.1 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 560885 folP 2955636 folP Yersinia pseudotuberculosis IP 32953 dihydropteroate synthase YP_069018.1 560052 D 273123 CDS YP_069019.1 51594828 2956082 560895..562235 1 NC_006155.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 562235 glmM 2956082 glmM Yersinia pseudotuberculosis IP 32953 phosphoglucosamine mutase YP_069019.1 560895 D 273123 CDS YP_069020.1 51594829 2956586 562458..562793 1 NC_006155.1 similar to Yersinia pestis YPO3499 secG; protein-export membrane protein (100% evalue=1.E-56); Salmonella typhi STY3471 secG; protein-export membrane protein (78.3% evalue=7.E-44); preprotein translocase subunit SecG 562793 secG 2956586 secG Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecG YP_069020.1 562458 D 273123 CDS YP_069021.2 161760591 2953244 563325..563777 1 NC_006155.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 563777 2953244 YPTB0478 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069021.2 563325 D 273123 CDS YP_069022.1 51594831 2956181 563799..565286 1 NC_006155.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 565286 nusA 2956181 nusA Yersinia pseudotuberculosis IP 32953 transcription elongation factor NusA YP_069022.1 563799 D 273123 CDS YP_069023.1 51594832 2955885 565311..567989 1 NC_006155.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 567989 infB 2955885 infB Yersinia pseudotuberculosis IP 32953 translation initiation factor IF-2 YP_069023.1 565311 D 273123 CDS YP_069024.1 51594833 2956402 568055..568465 1 NC_006155.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 568465 rbfA 2956402 rbfA Yersinia pseudotuberculosis IP 32953 ribosome-binding factor A YP_069024.1 568055 D 273123 CDS YP_069025.1 51594834 2956835 568465..569439 1 NC_006155.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 569439 truB 2956835 truB Yersinia pseudotuberculosis IP 32953 tRNA pseudouridine synthase B YP_069025.1 568465 D 273123 CDS YP_069026.1 51594835 2956557 569561..569830 1 NC_006155.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 569830 rpsO 2956557 rpsO Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S15 YP_069026.1 569561 D 273123 CDS YP_069027.1 51594836 2956290 570094..572208 1 NC_006155.1 similar to Yersinia pestis YPO3490 pnp; polyribonucleotide nucleotidyltransferase (99.8% evalue=0); Escherichia coli Z4525 pnp; polynucleotide phosphorylase; cytidylate kinase activity (87.4% evalue=0); polynucleotide phosphorylase 572208 pnp 2956290 pnp Yersinia pseudotuberculosis IP 32953 polynucleotide phosphorylase YP_069027.1 570094 D 273123 CDS YP_069028.1 51594837 2956147 572333..573217 1 NC_006155.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 573217 nlpI 2956147 nlpI Yersinia pseudotuberculosis IP 32953 lipoprotein NlpI YP_069028.1 572333 D 273123 CDS YP_069029.1 51594838 2955443 573404..575398 1 NC_006155.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 575398 deaD 2955443 deaD Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase DeaD YP_069029.1 573404 D 273123 CDS YP_069030.1 51594839 2953245 575418..575591 1 NC_006155.1 similar to Yersinia pestis YPO3487 hypothetical protein. 100% identical; hypothetical protein 575591 2953245 YPTB0487 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069030.1 575418 D 273123 CDS YP_069031.1 51594840 2953246 575634..576002 1 NC_006155.1 similar to Yersinia pestis YPO3486 conserved hypothetical protein. 100% identical.; hypothetical protein 576002 2953246 YPTB0488 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069031.1 575634 D 273123 CDS YP_069032.1 51594841 2953247 576026..576337 1 NC_006155.1 similar to Yersinia pestis YPO3485 transcriptional regulatory protein (100% evalue=5.E-51); transcriptional regulator 576337 2953247 YPTB0489 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069032.1 576026 D 273123 CDS YP_069033.1 51594842 2953248 complement(576592..577647) 1 NC_006155.1 similar to Yersinia pestis YPO3484 conserved hypothetical protein (99.4% evalue=0); Escherichia coli JW3129 yhbW; Hypothetical protein (o335) (70.6% evalue=1.E-135); hypothetical protein 577647 2953248 YPTB0490 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069033.1 576592 R 273123 CDS YP_069034.1 51594843 2953249 578155..579315 1 NC_006155.1 similar to Yersinia pestis YPO3483 multidrug efflux protein (100% evalue=0); Escherichia coli Z2509 efflux pump (65.1% evalue=1.E-117); multidrug efflux protein membrane fusion protein 579315 2953249 YPTB0491 Yersinia pseudotuberculosis IP 32953 multidrug efflux protein membrane fusion protein YP_069034.1 578155 D 273123 CDS YP_069035.1 51594844 2953250 579319..582444 1 NC_006155.1 similar to Yersinia pestis YPO3482 multidrug efflux protein (99.8% evalue=0); Escherichia coli Z2508 efflux pump (71.3% evalue=0); RND family multidrug efflux protein 582444 2953250 YPTB0492 Yersinia pseudotuberculosis IP 32953 RND family multidrug efflux protein YP_069035.1 579319 D 273123 CDS YP_069036.1 51594845 2955859 582446..583852 1 NC_006155.1 similar to Yersinia pestis YPO3481 ibeB; probable outer membrane efflux lipoprotein (99.5% evalue=0); Escherichia coli ECs1865 outer membrane channel protein (52.7% evalue=1.E-127); OMF family outer membrane multidrug efflux lipoprotein 583852 ibeB 2955859 ibeB Yersinia pseudotuberculosis IP 32953 OMF family outer membrane multidrug efflux lipoprotein YP_069036.1 582446 D 273123 CDS YP_069037.1 51594846 2953251 complement(583993..584871) 1 NC_006155.1 similar to Yersinia pestis YPO3480 conserved hypothetical protein (100% evalue=1.E-170); Escherichia coli Z4520 yhbV; orf, hypothetical protein (75.8% evalue=1.E-132); hypothetical protein 584871 2953251 YPTB0494 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069037.1 583993 R 273123 CDS YP_069038.1 51594847 2953252 complement(584883..585878) 1 NC_006155.1 similar to Yersinia pestis YPO3479 protease (99.3% evalue=0); Salmonella typhimurium STM3274 yhbU; protease (88.8% evalue=1.E-171); protease 585878 2953252 YPTB0495 Yersinia pseudotuberculosis IP 32953 protease YP_069038.1 584883 R 273123 CDS YP_069039.1 51594848 2953253 586194..586715 1 NC_006155.1 similar to Yersinia pestis YPO3477 lipid carrier protein (99.4% evalue=2.E-92); Salmonella typhimurium STM3273 yhbT; lipid carrier protein (73.1% evalue=1.E-61); lipid carrier protein 586715 2953253 YPTB0496 Yersinia pseudotuberculosis IP 32953 lipid carrier protein YP_069039.1 586194 D 273123 CDS YP_069040.1 51594849 2953254 586709..587212 1 NC_006155.1 similar to Yersinia pestis YPO3476 acetyltransferase (98.8% evalue=2.E-89); Escherichia coli ECs4037 hypothetical protein (69.4% evalue=7.E-61); acetyltransferase 587212 2953254 YPTB0497 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_069040.1 586709 D 273123 CDS YP_069041.1 51594850 2953255 complement(587387..587674) 1 NC_006155.1 similar to Yersinia pestis YPO3475 conserved hypothetical protein (98.9% evalue=2.E-47); Salmonella typhimurium STM3271 yhbQ; cytoplasmic protein (70.8% evalue=2.E-27); GIY-YIG nuclease superfamily protein 587674 2953255 YPTB0498 Yersinia pseudotuberculosis IP 32953 GIY-YIG nuclease superfamily protein YP_069041.1 587387 R 273123 CDS YP_069042.1 51594851 2953256 complement(587902..589920) 1 NC_006155.1 similar to Yersinia pestis YPO3474 hypothetical protein (99.1% evalue=0); hypothetical protein 589920 2953256 YPTB0499 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069042.1 587902 R 273123 CDS YP_069043.1 51594852 2953257 complement(589944..591170) 1 NC_006155.1 similar to Yersinia pestis YPO3473 exported protein (99.7% evalue=0); hypothetical protein 591170 2953257 YPTB0500 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069043.1 589944 R 273123 CDS YP_069044.1 51594853 2953258 591728..593041 1 NC_006155.1 similar to Yersinia pestis YPO3472 sugar binding protein (99.7% evalue=0); Agrobacterium tumefaciens Atu3338 thuE; ABC transporter, substrate binding protein [trehalose/maltose] (25.9% evalue=3.E-20); sugar ABC transporter substrate-binding protein 593041 2953258 YPTB0501 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069044.1 591728 D 273123 CDS YP_069045.1 51594854 2953259 593049..593933 1 NC_006155.1 similar to Yersinia pestis YPO3471 sugar transport system, permease (99.3% evalue=1.E-168); Agrobacterium tumefaciens AGR_pAT_78 probable binding protein dependent transport protein (36% evalue=4.E-46); sugar ABC transporter permease 593933 2953259 YPTB0502 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069045.1 593049 D 273123 CDS YP_069046.1 51594855 2953260 593952..594791 1 NC_006155.1 similar to Yersinia pestis YPO3470 sugar transport system, permease (100% evalue=1.E-158); Synechocystis slr1723 lacG; lactose transport system permease (36.2% evalue=5.E-42); sugar ABC transporter permease 594791 2953260 YPTB0503 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069046.1 593952 D 273123 CDS YP_069047.1 51594856 2953261 594803..595897 1 NC_006155.1 similar to Yersinia pestis YPO3469 sugar ABC transporter, ATP-binding protein (100% evalue=0); Mesorhizobium loti mlr8490 ABC transporter, ATP-binding protein (55.4% evalue=1.E-107); sugar ABC transporter ATP-binding protein 595897 2953261 YPTB0504 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_069047.1 594803 D 273123 CDS YP_069048.1 51594857 2953262 595912..597078 1 NC_006155.1 similar to Yersinia pestis YPO3473 exported protein (42.1% evalue=4.E-76); hypothetical protein 597078 2953262 YPTB0505 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069048.1 595912 D 273123 CDS YP_069049.1 51594858 2953263 597207..597650 1 NC_006155.1 similar to Yersinia pestis YPO3467 conserved hypothetical protein (98.6% evalue=4.E-81); Salmonella typhimurium STM3270 yhbP; cytoplasmic protein (48.9% evalue=2.E-35); hypothetical protein 597650 2953263 YPTB0506 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069049.1 597207 D 273123 CDS YP_069050.1 51594859 2953264 597802..598440 1 NC_006155.1 similar to Yersinia pestis YPO3466 conserved hypothetical protein (100% evalue=1.E-117); Salmonella typhimurium STM3268 yraR; nucleoside-diphosphate-sugar epimerase (56% evalue=2.E-59); hypothetical protein 598440 2953264 YPTB0507 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069050.1 597802 D 273123 CDS YP_069051.1 51594860 2956264 complement(598486..599238) 1 NC_006155.1 required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein 599238 phnP 2956264 phnP Yersinia pseudotuberculosis IP 32953 carbon-phosphorus lyase complex accessory protein YP_069051.1 598486 R 273123 CDS YP_069052.1 51594861 2956263 complement(599229..599810) 1 NC_006155.1 similar to Yersinia pestis YPO3464 phnN; PhnN protein (100% evalue=1.E-110); Escherichia coli Z5697 phnN; ATP-binding component of phosphonate transport (56.4% evalue=2.E-49); ribose 1,5-bisphosphokinase 599810 phnN 2956263 phnN Yersinia pseudotuberculosis IP 32953 ribose 1,5-bisphosphokinase YP_069052.1 599229 R 273123 CDS YP_069053.1 51594862 2956262 complement(599810..600946) 1 NC_006155.1 similar to Yersinia pestis YPO3463 phnM; PhnM protein (99.2% evalue=0); Escherichia coli Z5698 phnM; phosphonate metabolism (74% evalue=1.E-163); carbon-phosphorus lyase complex subunit 600946 phnM 2956262 phnM Yersinia pseudotuberculosis IP 32953 carbon-phosphorus lyase complex subunit YP_069053.1 599810 R 273123 CDS YP_069054.1 51594863 2956261 complement(600943..601662) 1 NC_006155.1 similar to Yersinia pestis YPO3462 phnL; phosphonates transport ATP-binding protein (99.5% evalue=1.E-134); Escherichia coli b4096 phnL; phosphonates transport ATP-binding protein phnL (76% evalue=4.E-92); phosphonate ABC transporter ATP binding protein 601662 phnL 2956261 phnL Yersinia pseudotuberculosis IP 32953 phosphonate ABC transporter ATP binding protein YP_069054.1 600943 R 273123 CDS YP_069055.1 51594864 2956260 complement(602051..602842) 1 NC_006155.1 similar to Yersinia pestis YPO3461 phnK; phosphonates transport ATP-binding protein (99.6% evalue=1.E-146); Escherichia coli Z5700 phnK; ATP-binding component of phosphonate transport (85% evalue=1.E-119); phosphonate C-P lyase system protein PhnK 602842 phnK 2956260 phnK Yersinia pseudotuberculosis IP 32953 phosphonate C-P lyase system protein PhnK YP_069055.1 602051 R 273123 CDS YP_069056.1 51594865 2956259 complement(602842..603723) 1 NC_006155.1 similar to Yersinia pestis YPO3460 phnJ; PhnJ protein (99.6% evalue=1.E-171); Escherichia coli ECs5081 phosphonate metabolism (85.6% evalue=1.E-142); protein in phn operon 603723 phnJ 2956259 phnJ Yersinia pseudotuberculosis IP 32953 protein in phn operon YP_069056.1 602842 R 273123 CDS YP_069057.1 51594866 2956258 complement(603716..604894) 1 NC_006155.1 similar to Yersinia pestis YPO3459 phnI; PhnI protein (98.7% evalue=0); Escherichia coli b4099 phnI; phnI protein (75.2% evalue=1.E-149); carbon-phosphorous lyase subunit 604894 phnI 2956258 phnI Yersinia pseudotuberculosis IP 32953 carbon-phosphorous lyase subunit YP_069057.1 603716 R 273123 CDS YP_069058.1 51594867 2956257 complement(604894..605520) 1 NC_006155.1 similar to Yersinia pestis YPO3458 phnH; PhnH protein (99.5% evalue=1.E-118); Escherichia coli ECs5083 phosphonate metabolism (47.3% evalue=4.E-46); carbon-phosphorus lyase complex subunit 605520 phnH 2956257 phnH Yersinia pseudotuberculosis IP 32953 carbon-phosphorus lyase complex subunit YP_069058.1 604894 R 273123 CDS YP_069059.1 51594868 2956256 complement(605520..605996) 1 NC_006155.1 similar to Yersinia pestis YPO3457 phnG; PhnG protein (100% evalue=1.E-86); Escherichia coli b4101 phnG; phnG protein (50% evalue=3.E-35); carbon-phosphorous lyase subunit 605996 phnG 2956256 phnG Yersinia pseudotuberculosis IP 32953 carbon-phosphorous lyase subunit YP_069059.1 605520 R 273123 CDS YP_069060.1 51594869 2956255 complement(605997..606722) 1 NC_006155.1 may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF 606722 phnF 2956255 phnF Yersinia pseudotuberculosis IP 32953 phosphonate metabolism transcriptional regulator PhnF YP_069060.1 605997 R 273123 CDS YP_069061.1 51594870 2956159 complement(607050..607484) 1 NC_006155.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 607484 nrdG 2956159 nrdG Yersinia pseudotuberculosis IP 32953 anaerobic ribonucleotide reductase-activating protein YP_069061.1 607050 R 273123 CDS YP_069062.1 51594871 2956156 complement(607691..609829) 1 NC_006155.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 609829 nrdD 2956156 nrdD Yersinia pseudotuberculosis IP 32953 anaerobic ribonucleoside triphosphate reductase YP_069062.1 607691 R 273123 CDS YP_069063.1 51594872 2953265 complement(610263..610964) 1 NC_006155.1 similar to Yersinia pestis YPO3453 ABC transporter, ATP-binding protein (99.5% evalue=1.E-127); Agrobacterium tumefaciens AGR_L_526 dipeptide transport system ATP-binding protein (50.6% evalue=1.E-57); oligo-dipeptide/nickel ABC transporter ATP-binding protein 610964 2953265 YPTB0520 Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter ATP-binding protein YP_069063.1 610263 R 273123 CDS YP_069064.1 51594873 2953266 complement(610966..611844) 1 NC_006155.1 similar to Yersinia pestis YPO3452 ABC transporter transporter, ATP-binding protein (100% evalue=1.E-166); Mesorhizobium loti mlr5516 oligopeptide ABC transporter, ATP-binding protein (43.6% evalue=5.E-59); oligo-dipeptide/nickel ABC transporter ATP-binding protein 611844 2953266 YPTB0521 Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter ATP-binding protein YP_069064.1 610966 R 273123 CDS YP_069065.1 51594874 2953267 complement(611837..612673) 1 NC_006155.1 similar to Yersinia pestis YPO3451 transporter, permease (100% evalue=1.E-158); Sinorhizobium meliloti SMc01527 dppC2; dipeptide transport system permease ABC transporter protein (59% evalue=2.E-87); oligo-dipeptide/nickel ABC transporter permease 612673 2953267 YPTB0522 Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter permease YP_069065.1 611837 R 273123 CDS YP_069066.1 51594875 2953268 complement(612692..613741) 1 NC_006155.1 similar to Yersinia pestis YPO3450 transporter, permease (100% evalue=0); Sinorhizobium meliloti SMc01526 dppB2; dipeptide transport system permease ABC transporter protein (48.5% evalue=1.E-86); oligo-dipeptide/nickel ABC transporter permease 613741 2953268 YPTB0523 Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter permease YP_069066.1 612692 R 273123 CDS YP_069067.1 51594876 2953269 complement(613837..615417) 1 NC_006155.1 similar to Sinorhizobium meliloti SMc01525 dppA2; dipeptide binding periplasmic protein (40% evalue=1.E-104); Mesorhizobium loti mlr5513 ABC transporter, periplasmic oligopeptide-binding protein (41% evalue=1.E-106); oligo-dipeptide/nickel ABC transporter substrate-binding protein 615417 2953269 YPTB0524 Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter substrate-binding protein YP_069067.1 613837 R 273123 CDS YP_069068.1 51594877 2953270 616044..616502 1 NC_006155.1 similar to Yersinia pestis YPO3447 conserved hypothetical protein (100% evalue=2.E-84); Escherichia coli Z5864 yjgK; orf, hypothetical protein (71.1% evalue=3.E-58); hypothetical protein 616502 2953270 YPTB0525 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069068.1 616044 D 273123 CDS YP_069069.1 51594878 2955218 complement(616765..617772) 1 NC_006155.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 617772 argI 2955218 argI Yersinia pseudotuberculosis IP 32953 ornithine carbamoyltransferase subunit I YP_069069.1 616765 R 273123 CDS YP_069070.1 51594879 2953271 617983..618414 1 NC_006155.1 similar to Yersinia pestis YPO3445 conserved hypothetical protein (100% evalue=9.E-79); Escherichia coli ECs5232 hypothetical protein (76.2% evalue=7.E-58); hypothetical protein 618414 2953271 YPTB0527 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069070.1 617983 D 273123 CDS YP_069071.1 51594880 2957085 complement(618773..619276) 1 NC_006155.1 similar to Yersinia pestis YPO3444 acetyltransferase (99.4% evalue=1.E-91); Salmonella typhimurium STM4473 yjgM; acetyltransferase (71% evalue=6.E-61); acetyltransferase 619276 yjgM 2957085 yjgM Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_069071.1 618773 R 273123 CDS YP_069072.1 51594881 2956890 complement(619419..622316) 1 NC_006155.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 622316 valS 2956890 valS Yersinia pseudotuberculosis IP 32953 valyl-tRNA synthetase YP_069072.1 619419 R 273123 CDS YP_069073.1 51594882 2955820 complement(622329..622778) 1 NC_006155.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 622778 holC 2955820 holC Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit chi YP_069073.1 622329 R 273123 CDS YP_069074.1 51594883 2956230 complement(622929..624440) 1 NC_006155.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 624440 pepA 2956230 pepA Yersinia pseudotuberculosis IP 32953 leucyl aminopeptidase YP_069074.1 622929 R 273123 CDS YP_069075.1 51594884 2957086 624720..625814 1 NC_006155.1 similar to Yersinia pestis YPO3440 membrane protein (99.7% evalue=0); Salmonella typhimurium STM4479 yjgP; permease (72.7% evalue=1.E-148); permease 625814 yjgP 2957086 yjgP Yersinia pseudotuberculosis IP 32953 permease YP_069075.1 624720 D 273123 CDS YP_069076.1 51594885 2957087 625814..626890 1 NC_006155.1 similar to Yersinia pestis YPO3439 membrane protein (100% evalue=0); Escherichia coli Z5874 yjgQ; orf, hypothetical protein (76.6% evalue=1.E-159); permease 626890 yjgQ 2957087 yjgQ Yersinia pseudotuberculosis IP 32953 permease YP_069076.1 625814 D 273123 CDS YP_069077.1 51594886 2953273 complement(628794..632042) 1 NC_006155.1 similar to Ureaplasma urealyticum UU095 hsdR; type I restriction enzyme R protein (26.8% evalue=2.E-71); Listeria innocua lin0521 similar to HsdR type IC restriction subunit (30.9% evalue=1.E-97); type I restriction enzyme, R subunit 632042 2953273 YPTB0535 Yersinia pseudotuberculosis IP 32953 type I restriction enzyme, R subunit YP_069077.1 628794 R 273123 CDS YP_069078.1 51594887 2953274 complement(632052..633335) 1 NC_006155.1 similar to Streptococcus pyogenes SPy1905 hsdS; type I restriction enzyme, S subunit (26% evalue=8.E-30); Staphylococcus aureus_N315 SA0392 hsdS; type I restriction enzyme, S subunit (25.1% evalue=2.E-18); type I restriction enzyme, S subunit 633335 2953274 YPTB0536 Yersinia pseudotuberculosis IP 32953 type I restriction enzyme, S subunit YP_069078.1 632052 R 273123 CDS YP_069079.1 51594888 2953275 complement(633337..635928) 1 NC_006155.1 similar to Streptococcus pyogenes SPy1906 hsdM; type I restriction enzyme M protein (43% evalue=1.E-101); Lactococcus lactis L0309 hsdM; type I restriction enzyme M protein (40.2% evalue=1.E-101); type I restriction-modification system, methyltransferase subunit (N-6 DNA methylase) 635928 2953275 YPTB0537 Yersinia pseudotuberculosis IP 32953 type I restriction-modification system, methyltransferase subunit (N-6 DNA methylase) YP_069079.1 633337 R 273123 CDS YP_069080.1 51594889 2953276 complement(636271..637317) 1 NC_006155.1 similar to Yersinia pestis YPO0398 M48 peptidase family protein (99.7% evalue=0); Sinorhizobium meliloti SMc00783 hypothetical transmembrane protein (26.4% evalue=2.E-25); M48 peptidase family protein 637317 2953276 YPTB0538 Yersinia pseudotuberculosis IP 32953 M48 peptidase family protein YP_069080.1 636271 R 273123 CDS YP_069081.1 51594890 2953277 complement(637364..638560) 1 NC_006155.1 similar to Yersinia pestis YPO0399 membrane protein (98.7% evalue=0); Salmonella typhimurium STM4474 yjgN; inner membrane protein (30.2% evalue=1.E-43); hypothetical protein 638560 2953277 YPTB0539 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069081.1 637364 R 273123 CDS YP_069082.1 51594891 2953278 639266..639802 1 NC_006155.1 similar to Yersinia pestis YPO0400 hypothetical protein (100% evalue=1.E-102); hypothetical protein 639802 2953278 YPTB0540 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069082.1 639266 D 273123 CDS YP_069083.1 51594892 2953279 639804..640679 1 NC_006155.1 similar to Yersinia pestis YPO0401 transcriptional regulator (99.6% evalue=1.E-166); Salmonella typhimurium STM4117 yijO; paral regulator (AraC/XylS family) (54.9% evalue=2.E-86); transcriptional regulator 640679 2953279 YPTB0541 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069083.1 639804 D 273123 CDS YP_069084.1 51594893 2955649 complement(640672..641016) 1 NC_006155.1 FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog; fructose-like phosphotransferase EIIB subunit 3 641016 frwD 2955649 frwD Yersinia pseudotuberculosis IP 32953 fructose-like phosphotransferase EIIB subunit 3 YP_069084.1 640672 R 273123 CDS YP_069085.1 51594894 2955647 complement(641109..641429) 1 NC_006155.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; PTS system fructose-like transporter subunit IIB 641429 frwB 2955647 frwB Yersinia pseudotuberculosis IP 32953 PTS system fructose-like transporter subunit IIB YP_069085.1 641109 R 273123 CDS YP_069086.2 229310107 2955648 complement(641552..642634) 1 NC_006155.1 FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; fructose-like permease EIIC subunit 2 642634 frwC 2955648 frwC Yersinia pseudotuberculosis IP 32953 fructose-like permease EIIC subunit 2 YP_069086.2 641552 R 273123 CDS YP_069087.1 51594896 2956348 642999..645539 1 NC_006155.1 similar to Yersinia pestis YPO0405 phosphotransferase system, enzyme I / PTS system, fructose-specific IIA component (97.1% evalue=0); Salmonella typhimurium STM4110 ptsA (63.7% evalue=0); PTS family transporter enzyme I phosphohistidine subunit 645539 pstA 2956348 pstA Yersinia pseudotuberculosis IP 32953 PTS family transporter enzyme I phosphohistidine subunit YP_069087.1 642999 D 273123 CDS YP_069088.1 51594897 2953280 complement(645601..646092) 1 NC_006155.1 similar to Yersinia pestis YPO0406 exported protein (100% evalue=8.E-86); Escherichia coli ECs5320 glycoprotein/receptor (46.2% evalue=3.E-32); hypothetical protein 646092 2953280 YPTB0546 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069088.1 645601 R 273123 CDS YP_069089.1 51594898 2957098 complement(646415..646705) 1 NC_006155.1 similar to Yersinia pestis YPO0407 conserved hypothetical protein (100% evalue=5.E-51); Salmonella typhi STY3791 conserved hypothetical protein (79.1% evalue=4.E-40); autoinducer-2 (AI-2) modifying protein LsrG 646705 yneC 2957098 yneC Yersinia pseudotuberculosis IP 32953 autoinducer-2 (AI-2) modifying protein LsrG YP_069089.1 646415 R 273123 CDS YP_069090.1 51594899 2957097 complement(646769..647644) 1 NC_006155.1 similar to Yersinia pestis YPO0408 aldolase (99.6% evalue=1.E-163); Salmonella typhimurium STM4078 yneB; fructose-1,6-bisphosphate aldolase (85.5% evalue=1.E-142); aldolase 647644 yneB 2957097 yneB Yersinia pseudotuberculosis IP 32953 aldolase YP_069090.1 646769 R 273123 CDS YP_069091.1 51594900 2953281 complement(647700..648719) 1 NC_006155.1 similar to Yersinia pestis YPO0409 periplasmic solute-binding protein (99.7% evalue=0); Escherichia coli ECs2123 LACI-type transcriptional regulator (84.4% evalue=1.E-163); sugar ABC transporter substrate-binding protein 648719 2953281 YPTB0549 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069091.1 647700 R 273123 CDS YP_069092.1 51594901 2956992 complement(648764..649765) 1 NC_006155.1 similar to Yersinia pestis YPO0410 ABC transporter permease (99.6% evalue=0); Salmonella typhimurium STM4076 ydeZ; ABC superfamily (membrane), sugar transport protein (79.5% evalue=1.E-149); sugar ABC transporter permease 649765 ydeZ 2956992 ydeZ Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069092.1 648764 R 273123 CDS YP_069093.1 51594902 2956991 complement(649762..650817) 1 NC_006155.1 similar to Yersinia pestis YPO0411 ABC transporter permease (98.8% evalue=0); Escherichia coli b1514 ydeY; simple sugar transport system permease (75.7% evalue=1.E-148); sugar ABC transporter permease 650817 ydeY 2956991 ydeY Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069093.1 649762 R 273123 CDS YP_069094.1 51594903 2955498 complement(650811..652394) 1 NC_006155.1 similar to Yersinia pestis YPO0412 ABC transporter ATP-binding protein (98.6% evalue=0); Salmonella typhimurium STM4074 ego; ABC-type sugar, aldose transport system, ATPase component (67.4% evalue=0); sugar ABC transporter ATPase 652394 ego 2955498 ego Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_069094.1 650811 R 273123 CDS YP_069095.1 51594904 2956990 652739..653752 1 NC_006155.1 similar to Salmonella typhi STY3797 ydeW; regulatory protein (69.6% evalue=1.E-120); Salmonella typhimurium STM4073 ydeW; transcriptional repressor (69.2% evalue=1.E-120); transcriptional repressor 653752 ydeW 2956990 ydeW Yersinia pseudotuberculosis IP 32953 transcriptional repressor YP_069095.1 652739 D 273123 CDS YP_069096.1 51594905 2956989 653923..655515 1 NC_006155.1 similar to Yersinia pestis YPO0415 carbohydrate kinase (99.8% evalue=0); Salmonella typhi STY3798 ydeV; sugar kinase (80.9% evalue=0); autoinducer-2 (AI-2) kinase 655515 ydeV 2956989 ydeV Yersinia pseudotuberculosis IP 32953 autoinducer-2 (AI-2) kinase YP_069096.1 653923 D 273123 CDS YP_069097.1 51594906 2953282 655984..657024 1 NC_006155.1 similar to Yersinia pestis YPO0416 lipopolysaccharide core biosynthesis protein (99.4% evalue=0); Escherichia coli ECs4507 lipopolysaccharide core biosynthesis protein RfaQ (41.5% evalue=5.E-63); lipopolysaccharide core biosynthesis protein 657024 2953282 YPTB0555 Yersinia pseudotuberculosis IP 32953 lipopolysaccharide core biosynthesis protein YP_069097.1 655984 D 273123 CDS YP_069098.1 51594907 2953283 657072..658298 1 NC_006155.1 similar to Yersinia pestis YPO0417 O-antigen biosynthesis protein (100% evalue=0); H. influenzae HI0874 hypothetical protein HI0874 (25.1% evalue=2.E-08); O-antigen biosynthesis protein 658298 2953283 YPTB0556 Yersinia pseudotuberculosis IP 32953 O-antigen biosynthesis protein YP_069098.1 657072 D 273123 CDS YP_069099.1 51594908 2953284 658664..659932 1 NC_006155.1 similar to Salmonella typhimurium STM1373 sufS; selenocysteine lyase (48.6% evalue=1.E-108); M. leprae ML0842 conserved hypothetical protein (48.6% evalue=1.E-110); cysteine desulfurase 659932 2953284 YPTB0557 Yersinia pseudotuberculosis IP 32953 cysteine desulfurase YP_069099.1 658664 D 273123 CDS YP_069100.1 51594909 2953285 659979..661157 1 NC_006155.1 similar to Thermoplasma volcanium TVG1333406 isovaleryl-CoA dehydrogenase precursor (24.7% evalue=5.E-23); A. fulgidus AF2244 acd-11; acyl-CoA dehydrogenase (27.2% evalue=2.E-25); acyl-CoA dehydrogenase 661157 2953285 YPTB0558 Yersinia pseudotuberculosis IP 32953 acyl-CoA dehydrogenase YP_069100.1 659979 D 273123 CDS YP_069101.1 51594910 2953286 661159..661434 1 NC_006155.1 . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 661434 2953286 YPTB0559 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069101.1 661159 D 273123 CDS YP_069102.1 51594911 2953287 661436..662272 1 NC_006155.1 . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 662272 2953287 YPTB0560 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069102.1 661436 D 273123 CDS YP_069103.1 51594912 2953288 662305..663531 1 NC_006155.1 similar to Mycobacterium tuberculosis_CDC1551MT3301 HesA/MoeB/ThiF family protein (42.6% evalue=4.E-74); Anabaena all2906 moeB; molybdopterin biosynthesis protein (45% evalue=3.E-76); molybdopterin biosynthesis protein 663531 2953288 YPTB0561 Yersinia pseudotuberculosis IP 32953 molybdopterin biosynthesis protein YP_069103.1 662305 D 273123 CDS YP_069104.1 51594913 2953289 complement(663710..663949) 1 NC_006155.1 similar to Bacillus halodurans transposase related protein (weak) ref|NP_243386.1|, evalue=0.092, 33% identity in 56 aa. This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 663949 2953289 YPTB0562 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069104.1 663710 R 273123 CDS YP_069105.1 51594914 2953290 664447..664644 1 NC_006155.1 similar to Yersinia pestis YPO0418 membrane protein. 95% identical; hypothetical protein 664644 2953290 YPTB0563 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069105.1 664447 D 273123 CDS YP_069106.1 51594915 2953291 664671..664904 1 NC_006155.1 similar to Yersinia pestis YPO0419 exported protein (98.7% evalue=2.E-36); hypothetical protein 664904 2953291 YPTB0564 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069106.1 664671 D 273123 CDS YP_069107.1 51594916 2953292 664956..666038 1 NC_006155.1 similar to Yersinia pestis YPO0420 lipoprotein (99.7% evalue=0); Vibrio cholerae VC1674 periplasmic linker protein, (28.1% evalue=7.E-40); lipoprotein heavy metal/multidrug efflux protein 666038 2953292 YPTB0565 Yersinia pseudotuberculosis IP 32953 lipoprotein heavy metal/multidrug efflux protein YP_069107.1 664956 D 273123 CDS YP_069108.1 51594917 2953293 666038..669124 1 NC_006155.1 similar to Yersinia pestis YPO0421 multi-drug efflux protein (99.9% evalue=0); Vibrio cholerae VC1673 transporter, AcrB/D/F family (50.8% evalue=0); heavy metal/multi-drug efflux protein 669124 2953293 YPTB0566 Yersinia pseudotuberculosis IP 32953 heavy metal/multi-drug efflux protein YP_069108.1 666038 D 273123 CDS YP_069109.1 51594918 2953294 complement(669487..669819) 1 NC_006155.1 similar to Yersinia pestis YPO0422 hypothetical protein (100% evalue=4.E-58); hypothetical protein 669819 2953294 YPTB0567 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069109.1 669487 R 273123 CDS YP_069110.1 51594919 2953295 complement(669966..670313) 1 NC_006155.1 similar to Yersinia pestis YPO0423 hypothetical protein (98.8% evalue=4.E-43); hypothetical protein 670313 2953295 YPTB0568 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069110.1 669966 R 273123 CDS YP_069111.1 51594920 2953296 670620..671705 1 NC_006155.1 similar to Yersinia pestis YPO0424 pectinesterase (100% evalue=0); A. thalianan At5g49180 K21P3.5; pectin methylesterase (32.6% evalue=1.E-27); pectinesterase A 671705 2953296 YPTB0569 Yersinia pseudotuberculosis IP 32953 pectinesterase A YP_069111.1 670620 D 273123 CDS YP_069112.1 51594921 2955809 complement(672246..673418) 1 NC_006155.1 similar to Yersinia pestis YPO0425 hmsT; HmsT protein (98.9% evalue=0); Salmonella typhimurium STM4551 diguanylate cyclase/phosphodiesterase domain 1 (44.2% evalue=3.E-80); diguanylate cyclase/phosphodiesterase 673418 hmsT 2955809 hmsT Yersinia pseudotuberculosis IP 32953 diguanylate cyclase/phosphodiesterase YP_069112.1 672246 R 273123 CDS YP_069113.1 51594922 2953297 673760..673999 1 NC_006155.1 similar to Yersinia pestis YPO0426 membrane protein (98.7% evalue=2.E-38); Salmonella typhimurium STM4552 inner membrane protein (46.5% evalue=6.E-15); hypothetical protein 673999 2953297 YPTB0571 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069113.1 673760 D 273123 CDS YP_069114.1 51594923 2956556 complement(674877..675920) 1 NC_006155.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 675920 rsmC 2956556 rsmC Yersinia pseudotuberculosis IP 32953 16S ribosomal RNA m2G1207 methyltransferase YP_069114.1 674877 R 273123 CDS YP_069115.1 51594924 2955821 676033..676470 1 NC_006155.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 676470 holD 2955821 holD Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit psi YP_069115.1 676033 D 273123 CDS YP_069116.1 51594925 2956456 676415..676858 1 NC_006155.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 676858 rimI 2956456 rimI Yersinia pseudotuberculosis IP 32953 ribosomal-protein-alanine N-acetyltransferase YP_069116.1 676415 D 273123 CDS YP_069117.1 51594926 2956317 677036..678625 1 NC_006155.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 678625 prfC 2956317 prfC Yersinia pseudotuberculosis IP 32953 peptide chain release factor 3 YP_069117.1 677036 D 273123 CDS YP_069118.1 51594927 2956201 678953..679567 1 NC_006155.1 similar to Yersinia pestis YPO0431 osmY; osmotically inducible protein Y (99% evalue=1.E-103); Salmonella typhi STY4911 osmY; periplasmic protein (63.5% evalue=3.E-66); hypothetical protein 679567 osmY 2956201 osmY Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069118.1 678953 D 273123 CDS YP_069119.1 51594928 2953298 679734..679895 1 NC_006155.1 similar to Yersinia pestis YPO0432 exported protein (98.1% evalue=3.E-22); Escherichia coli Z5978 hypothetical protein (90.3% evalue=7.E-20); hypothetical protein 679895 2953298 YPTB0577 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069119.1 679734 D 273123 CDS YP_069120.1 51594929 2957090 679969..681240 1 NC_006155.1 similar to Yersinia pestis YPO0433 conserved hypothetical protein (99.7% evalue=0); Escherichia coli JW4340 yjjU; Hypothetical protein (65.6% evalue=1.E-128); hypothetical protein 681240 yjjU 2957090 yjjU Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069120.1 679969 D 273123 CDS YP_069121.1 51594930 2957091 681277..682065 1 NC_006155.1 similar to Yersinia pestis YPO0434 metalloenzyme (99.6% evalue=1.E-147); Escherichia coli JW4341 yjjV; Hypothetical protein (63.9% evalue=2.E-89); hydrolase 682065 yjjV 2957091 yjjV Yersinia pseudotuberculosis IP 32953 hydrolase YP_069121.1 681277 D 273123 CDS YP_069122.1 51594931 2953299 682600..683871 1 NC_006155.1 similar to Yersinia pestis YPO0435 Na+ dependent nucleoside transporter-family protein (99.5% evalue=0); Vibrio cholerae VC2352 NupC family protein (72.2% evalue=1.E-169); Na+ dependent nucleoside transporter-family protein 683871 2953299 YPTB0580 Yersinia pseudotuberculosis IP 32953 Na+ dependent nucleoside transporter-family protein YP_069122.1 682600 D 273123 CDS YP_069123.1 51594932 2955452 684500..685297 1 NC_006155.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 685297 deoC 2955452 deoC Yersinia pseudotuberculosis IP 32953 deoxyribose-phosphate aldolase YP_069123.1 684500 D 273123 CDS YP_069124.1 51594933 2955449 685418..686740 1 NC_006155.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 686740 deoA 2955449 deoA Yersinia pseudotuberculosis IP 32953 thymidine phosphorylase YP_069124.1 685418 D 273123 CDS YP_069125.1 51594934 2955450 686872..688095 1 NC_006155.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 688095 deoB 2955450 deoB Yersinia pseudotuberculosis IP 32953 phosphopentomutase YP_069125.1 686872 D 273123 CDS YP_069126.1 51594935 2955453 688220..688939 1 NC_006155.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 688939 deoD 2955453 deoD Yersinia pseudotuberculosis IP 32953 purine nucleoside phosphorylase YP_069126.1 688220 D 273123 CDS YP_069127.1 51594936 2956615 complement(689051..689752) 1 NC_006155.1 similar to Yersinia pestis YPO0441 smp; membrane protein (100% evalue=1.E-125); Salmonella typhi STY4924 smp; membrane protein (65.4% evalue=2.E-75); hypothetical protein 689752 smp 2956615 smp Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069127.1 689051 R 273123 CDS YP_069128.1 51594937 2956595 689986..690966 1 NC_006155.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 690966 serB 2956595 serB Yersinia pseudotuberculosis IP 32953 phosphoserine phosphatase YP_069128.1 689986 D 273123 CDS YP_069129.1 51594938 2956397 691085..692467 1 NC_006155.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 692467 radA 2956397 radA Yersinia pseudotuberculosis IP 32953 DNA repair protein RadA YP_069129.1 691085 D 273123 CDS YP_069130.1 51594939 2956118 692626..693897 1 NC_006155.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 693897 nadR 2956118 nadR Yersinia pseudotuberculosis IP 32953 nicotinamide-nucleotide adenylyltransferase YP_069130.1 692626 D 273123 CDS YP_069131.1 51594940 2953300 694054..695184 1 NC_006155.1 similar to Yersinia pestis YPO0445 conserved hypothetical protein (99.2% evalue=0); Pseudomonas aeruginosa PA0574 hypothetical protein (56.3% evalue=1.E-116); hypothetical protein 695184 2953300 YPTB0589 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069131.1 694054 D 273123 CDS YP_069132.1 51594941 2957088 complement(695345..697012) 1 NC_006155.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 697012 yjjK 2957088 yjjK Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_069132.1 695345 R 273123 CDS YP_069133.1 51594942 2953301 complement(697195..697701) 1 NC_006155.1 similar to Yersinia pestis YPO0448 lipoprotein (98.7% evalue=2.E-88); Pseudomonas aeruginosa PA1119 probable outer membrane lipoprotein (52.4% evalue=5.E-37); OmpA/OmpF family outer membrane porin 697701 2953301 YPTB0591 Yersinia pseudotuberculosis IP 32953 OmpA/OmpF family outer membrane porin YP_069133.1 697195 R 273123 CDS YP_069134.1 51594943 2953302 complement(697707..698984) 1 NC_006155.1 similar to Yersinia pestis YPO0449 exported protein (100% evalue=0); Pseudomonas aeruginosa PA1120 conserved hypothetical protein (55.6% evalue=1.E-117); hypothetical protein 698984 2953302 YPTB0592 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069134.1 697707 R 273123 CDS YP_069135.1 51594944 2953303 complement(699005..699628) 1 NC_006155.1 similar to Yersinia pestis YPO0450 membrane protein (100% evalue=1.E-117); Pseudomonas aeruginosa PA1121 conserved hypothetical protein (43.2% evalue=2.E-33); hypothetical protein 699628 2953303 YPTB0593 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069135.1 699005 R 273123 CDS YP_069136.1 51594945 2953304 complement(700003..702729) 1 NC_006155.1 similar to Yersinia pestis YPO0451 cation-transporting P-type ATPase (99.8% evalue=0); Pseudomonas aeruginosa PA1429 probable cation-transporting P-type ATPase (44.2% evalue=0); Ca++ transporting P-type ATPase 702729 2953304 YPTB0594 Yersinia pseudotuberculosis IP 32953 Ca++ transporting P-type ATPase YP_069136.1 700003 R 273123 CDS YP_069137.1 51594946 2956609 703299..705218 1 NC_006155.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 705218 slt 2956609 slt Yersinia pseudotuberculosis IP 32953 lytic murein transglycosylase YP_069137.1 703299 D 273123 CDS YP_069138.1 51594947 2956832 705489..705866 1 NC_006155.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 705866 trpR 2956832 trpR Yersinia pseudotuberculosis IP 32953 Trp operon repressor YP_069138.1 705489 D 273123 CDS YP_069139.1 51594948 2953305 complement(705863..706405) 1 NC_006155.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 706405 2953305 YPTB0597 Yersinia pseudotuberculosis IP 32953 NTPase YP_069139.1 705863 R 273123 CDS YP_069140.1 51594949 2955740 706515..707162 1 NC_006155.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 707162 gpmB 2955740 gpmB Yersinia pseudotuberculosis IP 32953 phosphoglycerate mutase YP_069140.1 706515 D 273123 CDS YP_069141.1 51594950 2956477 complement(707159..708025) 1 NC_006155.1 similar to Yersinia pestis YPO0456 rob; right origin-binding protein (100% evalue=1.E-170); Salmonella typhimurium STM4586 rob; transcriptional regulator (AraC/XylS family) (67.4% evalue=1.E-112); AraC family transcriptional regulator 708025 rob 2956477 rob Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_069141.1 707159 R 273123 CDS YP_069142.1 51594951 2955357 708251..708718 1 NC_006155.1 similar to Yersinia pestis YPO0457 creA; exported protein (100% evalue=2.E-84); Salmonella typhi STY4934 creA; conserved hypothetical protein (79.7% evalue=7.E-67); hypothetical protein 708718 creA 2955357 creA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069142.1 708251 D 273123 CDS YP_069143.1 51594952 2955210 complement(708892..709608) 1 NC_006155.1 similar to Yersinia pestis YPO0458 arcA, dye, fexA, sfrA, seg, msp, cpxC; aerobic respiration control protein (100% evalue=1.E-135); Escherichia coli Z6004 arcA; negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) (92.8% evalue=1.E-125); two-component response regulator 709608 arcA 2955210 arcA Yersinia pseudotuberculosis IP 32953 two-component response regulator YP_069143.1 708892 R 273123 CDS YP_069144.1 51594953 2956700 710712..713171 1 NC_006155.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 713171 thrA 2956700 thrA Yersinia pseudotuberculosis IP 32953 bifunctional aspartokinase I/homoserine dehydrogenase I YP_069144.1 710712 D 273123 CDS YP_069145.1 51594954 2956701 713174..714103 1 NC_006155.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 714103 thrB 2956701 thrB Yersinia pseudotuberculosis IP 32953 homoserine kinase YP_069145.1 713174 D 273123 CDS YP_069146.1 51594955 2956702 714107..715396 1 NC_006155.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 715396 thrC 2956702 thrC Yersinia pseudotuberculosis IP 32953 threonine synthase YP_069146.1 714107 D 273123 CDS YP_069147.1 51594956 2956916 complement(716213..716989) 1 NC_006155.1 similar to Yersinia pestis YPO0462 conserved hypothetical protein (100% evalue=1.E-144); Escherichia coli JW0005 yaaA; inner membrane transport protein (78.5% evalue=1.E-113); hypothetical protein 716989 yaaA 2956916 yaaA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069147.1 716213 R 273123 CDS YP_069148.1 51594957 2956657 717504..718457 1 NC_006155.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 718457 talB 2956657 talB Yersinia pseudotuberculosis IP 32953 transaldolase B YP_069148.1 717504 D 273123 CDS YP_069149.1 51594958 2956066 718745..719332 1 NC_006155.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 719332 mogA 2956066 mogA Yersinia pseudotuberculosis IP 32953 molybdenum cofactor biosynthesis protein MogA YP_069149.1 718745 D 273123 CDS YP_069150.1 51594959 2953306 719460..720839 1 NC_006155.1 similar to Yersinia pestis YPO0465 transport protein (99.3% evalue=0); Pseudomonas aeruginosa PA5370 probable MFS transporter (68.9% evalue=1.E-165); major facilitator superfamily proline/glycine/betaine permease 720839 2953306 YPTB0608 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily proline/glycine/betaine permease YP_069150.1 719460 D 273123 CDS YP_069151.1 51594960 2953307 complement(720917..723373) 1 NC_006155.1 similar to Yersinia pestis YPO2884 exported protein (34% evalue=1.E-128); hypothetical protein 723373 2953307 YPTB0609 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069151.1 720917 R 273123 CDS YP_069152.1 51594961 2956917 complement(723664..724275) 1 NC_006155.1 similar to Yersinia pestis YPO0467 yaaH; membrane protein (98.5% evalue=1.E-111); Salmonella typhimurium STM0009 yaaH; regulator (76.3% evalue=2.E-79); hypothetical protein 724275 yaaH 2956917 yaaH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069152.1 723664 R 273123 CDS YP_069153.1 51594962 2955475 724649..726559 1 NC_006155.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 726559 dnaK 2955475 dnaK Yersinia pseudotuberculosis IP 32953 molecular chaperone DnaK YP_069153.1 724649 D 273123 CDS YP_069154.1 51594963 2955474 726671..727810 1 NC_006155.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 727810 dnaJ 2955474 dnaJ Yersinia pseudotuberculosis IP 32953 molecular chaperone DnaJ YP_069154.1 726671 D 273123 CDS YP_069155.1 51594964 2956137 728053..729237 1 NC_006155.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 729237 nhaA 2956137 nhaA Yersinia pseudotuberculosis IP 32953 pH-dependent sodium/proton antiporter YP_069155.1 728053 D 273123 CDS YP_069156.1 51594965 2956139 729367..730266 1 NC_006155.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 730266 nhaR 2956139 nhaR Yersinia pseudotuberculosis IP 32953 transcriptional activator NhaR YP_069156.1 729367 D 273123 CDS YP_069157.1 51594966 2956547 complement(730397..730660) 1 NC_006155.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 730660 rpsT 2956547 rpsT Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S20 YP_069157.1 730397 R 273123 CDS YP_069158.1 51594967 2956454 731075..732013 1 NC_006155.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 732013 ribF 2956454 ribF Yersinia pseudotuberculosis IP 32953 bifunctional riboflavin kinase/FMN adenylyltransferase YP_069158.1 731075 D 273123 CDS YP_069159.1 51594968 2955869 732045..734861 1 NC_006155.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 734861 ileS 2955869 ileS Yersinia pseudotuberculosis IP 32953 isoleucyl-tRNA synthetase YP_069159.1 732045 D 273123 CDS YP_069160.1 51594969 2955972 734861..735370 1 NC_006155.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 735370 lspA 2955972 lspA Yersinia pseudotuberculosis IP 32953 lipoprotein signal peptidase YP_069160.1 734861 D 273123 CDS YP_069161.1 51594970 2955553 735438..735896 1 NC_006155.1 similar to Yersinia pestis YPO0476a fkpB, slpA; FKBP-type peptidyl-prolyl cis-trans isomerase (99.3% evalue=3.E-82); Salmonella typhi STY0057 fkpB; probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase (69.4% evalue=3.E-54); FKBP-type peptidylprolyl isomerase 735896 fkpB 2955553 fkpB Yersinia pseudotuberculosis IP 32953 FKBP-type peptidylprolyl isomerase YP_069161.1 735438 D 273123 CDS YP_069162.1 51594971 2955981 735877..736830 1 NC_006155.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 736830 ispH 2955981 ispH Yersinia pseudotuberculosis IP 32953 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_069162.1 735877 D 273123 CDS YP_069163.1 51594972 2956710 737060..737518 1 NC_006155.1 similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 737518 tnp 2956710 tnp Yersinia pseudotuberculosis IP 32953 transposase for the IS1541 insertion element YP_069163.1 737060 D 273123 CDS YP_069164.1 51594973 2955427 738009..738830 1 NC_006155.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 738830 dapB 2955427 dapB Yersinia pseudotuberculosis IP 32953 dihydrodipicolinate reductase YP_069164.1 738009 D 273123 CDS YP_069165.1 51594974 2955303 739303..740478 1 NC_006155.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 740478 carA 2955303 carA Yersinia pseudotuberculosis IP 32953 carbamoyl phosphate synthase small subunit YP_069165.1 739303 D 273123 CDS YP_069166.1 51594975 2955304 740494..743727 1 NC_006155.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 743727 carB 2955304 carB Yersinia pseudotuberculosis IP 32953 carbamoyl phosphate synthase large subunit YP_069166.1 740494 D 273123 CDS YP_069167.1 51594976 2953308 complement(743953..744567) 1 NC_006155.1 similar to Yersinia pestis YPO0483 LysE type translocator (96.5% evalue=1.E-109); Pseudomonas aeruginosa PA2710 hypothetical protein (73.8% evalue=3.E-81); RhtB/LysE family threonine efflux pump 744567 2953308 YPTB0625 Yersinia pseudotuberculosis IP 32953 RhtB/LysE family threonine efflux pump YP_069167.1 743953 R 273123 CDS YP_069168.1 51594977 2957089 744882..745682 1 NC_006155.1 similar to Yersinia pestis YPO0484 yjjP; membrane protein (99.6% evalue=1.E-148); Salmonella typhi STY4899 membrane protein (74% evalue=1.E-107); transmembrane protein 745682 yjjP 2957089 yjjP Yersinia pseudotuberculosis IP 32953 transmembrane protein YP_069168.1 744882 D 273123 CDS YP_069169.2 229310106 2953309 745673..746143 1 NC_006155.1 similar to Yersinia pestis YPO0485 membrane protein (97.4% evalue=8.E-79); Salmonella typhimurium STM4545 inner membrane protein (75.9% evalue=3.E-63); hypothetical protein 746143 2953309 YPTB0627 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069169.2 745673 D 273123 CDS YP_069170.1 51594979 2955630 746293..746775 1 NC_006155.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 746775 folA 2955630 folA Yersinia pseudotuberculosis IP 32953 dihydrofolate reductase YP_069170.1 746293 D 273123 CDS YP_069171.1 51594980 2953310 747266..747541 1 NC_006155.1 similar to Yersinia pestis YPO488 with a frameshift. Either this gene or the Yersinia pestis gene are a possible pseudogene.; hypothetical protein 747541 2953310 YPTB0629 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069171.1 747266 D 273123 CDS YP_069172.1 51594981 2953311 747614..748078 1 NC_006155.1 similar to Yersinia pestis YPO0489 exported protein (96.1% evalue=3.E-84); hypothetical protein 748078 2953311 YPTB0630 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069172.1 747614 D 273123 CDS YP_069173.1 51594982 2955199 complement(748168..749037) 1 NC_006155.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 749037 apaH 2955199 apaH Yersinia pseudotuberculosis IP 32953 diadenosine tetraphosphatase YP_069173.1 748168 R 273123 CDS YP_069174.1 51594983 2955198 complement(749054..749431) 1 NC_006155.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 749431 apaG 2955198 apaG Yersinia pseudotuberculosis IP 32953 ApaG protein YP_069174.1 749054 R 273123 CDS YP_069175.1 51594984 2955927 complement(749445..750263) 1 NC_006155.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 750263 ksgA 2955927 ksgA Yersinia pseudotuberculosis IP 32953 dimethyladenosine transferase YP_069175.1 749445 R 273123 CDS YP_069176.1 51594985 2956222 complement(750256..751251) 1 NC_006155.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 751251 pdxA 2956222 pdxA Yersinia pseudotuberculosis IP 32953 4-hydroxythreonine-4-phosphate dehydrogenase YP_069176.1 750256 R 273123 CDS YP_069177.1 51594986 2956653 complement(751235..752539) 1 NC_006155.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 752539 surA 2956653 surA Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase SurA YP_069177.1 751235 R 273123 CDS YP_069178.1 51594987 2955883 complement(752607..754949) 1 NC_006155.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 754949 imp 2955883 imp Yersinia pseudotuberculosis IP 32953 organic solvent tolerance protein YP_069178.1 752607 R 273123 CDS YP_069179.1 51594988 2955461 755134..755967 1 NC_006155.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 755967 djlA 2955461 djlA Yersinia pseudotuberculosis IP 32953 Dna-J like membrane chaperone protein YP_069179.1 755134 D 273123 CDS YP_069180.1 51594989 2956462 complement(756284..756904) 1 NC_006155.1 similar to Yersinia pestis YPO0497 rluA; ribosomal large subunit pseudouridine synthase A (100% evalue=1.E-118); Escherichia coli b0058 rluA; ribosomal large subunit pseudouridine synthase A. (pseudouridylate synthase) (uracil hydrolyase) (77.1% evalue=2.E-90); 23S rRNA pseudouridylate 746 synthase 756904 rluA 2956462 rluA Yersinia pseudotuberculosis IP 32953 23S rRNA pseudouridylate 746 synthase YP_069180.1 756284 R 273123 CDS YP_069181.1 51594990 2953312 complement(758127..758870) 1 NC_006155.1 similar to Yersinia pestis YPO0498 hypothetical protein (100% evalue=1.E-144); hypothetical protein 758870 2953312 YPTB0639 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069181.1 758127 R 273123 CDS YP_069182.1 51594991 2953313 759200..760213 1 NC_006155.1 similar to Yersinia pestis YPO0499 hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0082 hypothetical protein (33.8% evalue=1.E-07); hypothetical protein 760213 2953313 YPTB0640 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069182.1 759200 D 273123 CDS YP_069183.1 51594992 2953314 760224..760784 1 NC_006155.1 similar to Yersinia pestis YPO0500 conserved hypothetical protein (100% evalue=1.E-101); Pseudomonas aeruginosa PA0083 conserved hypothetical protein (59.8% evalue=9.E-50); hypothetical protein 760784 2953314 YPTB0641 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069183.1 760224 D 273123 CDS YP_069184.1 51594993 2953315 760784..762295 1 NC_006155.1 similar to Yersinia pestis YPO0501 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0084 conserved hypothetical protein (63.8% evalue=0); hypothetical protein 762295 2953315 YPTB0642 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069184.1 760784 D 273123 CDS YP_069185.1 51594994 2953316 762458..762976 1 NC_006155.1 similar to Yersinia pestis YPO0502 conserved hypothetical protein (100% evalue=8.E-98); Pseudomonas aeruginosa PA0085 conserved hypothetical protein (38.9% evalue=2.E-27); hypothetical protein 762976 2953316 YPTB0643 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069185.1 762458 D 273123 CDS YP_069186.1 51594995 2953317 763050..763493 1 NC_006155.1 similar to Yersinia pestis YPO0503 conserved hypothetical protein (100% evalue=4.E-80); Salmonella typhimurium STM0269 cytoplasmic protein (33% evalue=4.E-10); hypothetical protein 763493 2953317 YPTB0644 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069186.1 763050 D 273123 CDS YP_069187.1 51594996 2953318 763526..765370 1 NC_006155.1 similar to Yersinia pestis YPO0504 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0088 hypothetical protein (29.4% evalue=3.E-57); hypothetical protein 765370 2953318 YPTB0645 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069187.1 763526 D 273123 CDS YP_069188.1 51594997 2953319 765363..766346 1 NC_006155.1 similar to Yersinia pestis YPO0505 conserved hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0089 hypothetical protein (27.9% evalue=9.E-25); hypothetical protein 766346 2953319 YPTB0646 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069188.1 765363 D 273123 CDS YP_069189.1 51594998 2955333 766349..768952 1 NC_006155.1 similar to Yersinia pestis YPO0506 clpB, htpM; Clp ATPase (100% evalue=0); Pseudomonas aeruginosa PA0090 probable ClpA/B-type chaperone (44.4% evalue=0); ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE 768952 clpB 2955333 clpB Yersinia pseudotuberculosis IP 32953 ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE YP_069189.1 766349 D 273123 CDS YP_069190.1 51594999 2953320 769056..771404 1 NC_006155.1 similar to Yersinia pestis YPO0507 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0095 conserved hypothetical protein (36.1% evalue=6.E-96); hypothetical protein 771404 2953320 YPTB0648 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069190.1 769056 D 273123 CDS YP_069191.1 51595000 2953321 771417..773636 1 NC_006155.1 similar to Yersinia pestis YPO0509 hypothetical protein (99.6% evalue=0); hypothetical protein 773636 2953321 YPTB0649 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069191.1 771417 D 273123 CDS YP_069192.1 51595001 2953322 773662..774765 1 NC_006155.1 similar to Yersinia pestis YPO0510 hypothetical protein (100% evalue=0); Anabaena alr1142 hypothetical protein (33.8% evalue=8.E-10); hypothetical protein 774765 2953322 YPTB0650 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069192.1 773662 D 273123 CDS YP_069193.1 51595002 2953323 774758..775375 1 NC_006155.1 similar to Yersinia pestis YPO0511 hypothetical protein (100% evalue=1.E-112); hypothetical protein 775375 2953323 YPTB0651 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069193.1 774758 D 273123 CDS YP_069194.1 51595003 2953324 775381..775746 1 NC_006155.1 similar to Yersinia pestis YPO0511a hypothetical protein (100% evalue=6.E-67); hypothetical protein 775746 2953324 YPTB0652 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069194.1 775381 D 273123 CDS YP_069195.1 51595004 2953325 775739..776230 1 NC_006155.1 similar to Yersinia pestis YPO0512 lipoprotein (99.3% evalue=1.E-88); lipoprotein 776230 2953325 YPTB0653 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_069195.1 775739 D 273123 CDS YP_069196.1 51595005 2953326 776350..777705 1 NC_006155.1 similar to Yersinia pestis YPO0513 conserved hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0079 hypothetical protein (34.6% evalue=2.E-72); hypothetical protein 777705 2953326 YPTB0654 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069196.1 776350 D 273123 CDS YP_069197.1 51595006 2953327 777702..779312 1 NC_006155.1 similar to Yersinia pestis YPO0514 OmpA-family membrane protein (99.8% evalue=0); Salmonella typhi STY0305 membrane protein (29.3% evalue=3.E-26); hypothetical protein 779312 2953327 YPTB0655 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069197.1 777702 D 273123 CDS YP_069198.1 51595007 2953328 779321..782815 1 NC_006155.1 similar to Yersinia pestis YPO0515 membrane protein (99.8% evalue=0); Pseudomonas aeruginosa PA0077 hypothetical protein (25.2% evalue=3.E-93); hypothetical protein 782815 2953328 YPTB0656 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069198.1 779321 D 273123 CDS YP_069199.1 51595008 2953329 782837..783190 1 NC_006155.1 similar to Yersinia pestis YPO0516 hypothetical protein (100% evalue=1.E-61); hypothetical protein 783190 2953329 YPTB0657 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069199.1 782837 D 273123 CDS YP_069200.1 51595009 2956400 complement(783446..786352) 1 NC_006155.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 786352 rapA 2956400 rapA Yersinia pseudotuberculosis IP 32953 ATP-dependent helicase HepA YP_069200.1 783446 R 273123 CDS YP_069201.1 51595010 2956295 complement(786813..789182) 1 NC_006155.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 789182 polB 2956295 polB Yersinia pseudotuberculosis IP 32953 DNA polymerase II YP_069201.1 786813 R 273123 CDS YP_069202.1 51595011 2953330 789378..790145 1 NC_006155.1 similar to Yersinia pestis YPO0519 DedA-family membrane protein (100% evalue=1.E-148); Escherichia coli Z0074 yabI; orf, hypothetical protein (58.8% evalue=3.E-84); DedA family membrane protein 790145 2953330 YPTB0660 Yersinia pseudotuberculosis IP 32953 DedA family membrane protein YP_069202.1 789378 D 273123 CDS YP_069203.2 229310105 2956698 complement(790214..790924) 1 NC_006155.1 with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit 790924 thiQ 2956698 thiQ Yersinia pseudotuberculosis IP 32953 thiamine transporter ATP-binding subunit YP_069203.2 790214 R 273123 CDS YP_069204.1 51595013 2956697 complement(790911..792518) 1 NC_006155.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 792518 thiP 2956697 thiP Yersinia pseudotuberculosis IP 32953 thiamine transporter membrane protein YP_069204.1 790911 R 273123 CDS YP_069205.1 51595014 2956671 complement(792494..793486) 1 NC_006155.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 793486 tbpA 2956671 tbpA Yersinia pseudotuberculosis IP 32953 thiamine transporter substrate binding subunit YP_069205.1 792494 R 273123 CDS YP_069206.1 51595015 2953331 794132..795634 1 NC_006155.1 . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 795634 2953331 YPTB0664 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069206.1 794132 D 273123 CDS YP_069207.1 51595016 2953333 complement(796037..796414) 1 NC_006155.1 similar to Yersinia pestis YPCD1.89 YPCD1.89 (65.4% evalue=6.E-35); Salmonella typhimurium STM2764 integrase core domain (84.4% evalue=1.E-51); IS1400 transposase B 796414 2953333 YPTB0666 Yersinia pseudotuberculosis IP 32953 IS1400 transposase B YP_069207.1 796037 R 273123 CDS YP_069208.1 51595017 2956918 complement(796557..798218) 1 NC_006155.1 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 798218 yabN 2956918 yabN Yersinia pseudotuberculosis IP 32953 transcriptional regulator SgrR YP_069208.1 796557 R 273123 CDS YP_069209.1 51595018 2956598 798864..800045 1 NC_006155.1 similar to Escherichia coli b0070 yabM; sugar efflux transporter A (70.6% evalue=1.E-154); Escherichia coli JW0069 yabM, leuD; Sugar efflux protein (70.9% evalue=1.E-154); major facilitator superfamily transporter sugar efflux pump 800045 setA 2956598 setA Yersinia pseudotuberculosis IP 32953 major facilitator superfamily transporter sugar efflux pump YP_069209.1 798864 D 273123 CDS YP_069210.1 51595019 2955942 complement(800323..800925) 1 NC_006155.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 800925 leuD 2955942 leuD Yersinia pseudotuberculosis IP 32953 isopropylmalate isomerase small subunit YP_069210.1 800323 R 273123 CDS YP_069211.1 51595020 2955941 complement(800940..802370) 1 NC_006155.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 802370 leuC 2955941 leuC Yersinia pseudotuberculosis IP 32953 isopropylmalate isomerase large subunit YP_069211.1 800940 R 273123 CDS YP_069212.2 161760590 2955940 complement(802372..803463) 1 NC_006155.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 803463 leuB 2955940 leuB Yersinia pseudotuberculosis IP 32953 3-isopropylmalate dehydrogenase YP_069212.2 802372 R 273123 CDS YP_069213.1 51595022 2955939 complement(803466..805028) 1 NC_006155.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 805028 leuA 2955939 leuA Yersinia pseudotuberculosis IP 32953 2-isopropylmalate synthase YP_069213.1 803466 R 273123 CDS YP_069214.1 51595023 2955943 806244..807200 1 NC_006155.1 activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 807200 leuO 2955943 leuO Yersinia pseudotuberculosis IP 32953 leucine transcriptional activator YP_069214.1 806244 D 273123 CDS YP_069215.1 51595024 2953334 807753..809558 1 NC_006155.1 similar to Yersinia pestis YPO0537 AMP-binding enzyme-family protein (100% evalue=0); Vibrio cholerae VC2484 long-chain-fatty-acid--CoA ligase, (56.3% evalue=0); AMP-binding protein 809558 2953334 YPTB0674 Yersinia pseudotuberculosis IP 32953 AMP-binding protein YP_069215.1 807753 D 273123 CDS YP_069216.1 51595025 2955877 810018..811745 1 NC_006155.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 811745 ilvI 2955877 ilvI Yersinia pseudotuberculosis IP 32953 acetolactate synthase 3 catalytic subunit YP_069216.1 810018 D 273123 CDS YP_069217.1 51595026 2955876 811748..812242 1 NC_006155.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 812242 ilvH 2955876 ilvH Yersinia pseudotuberculosis IP 32953 acetolactate synthase 3 regulatory subunit YP_069217.1 811748 D 273123 CDS YP_069218.1 51595027 2955646 812710..813720 1 NC_006155.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 813720 fruR 2955646 fruR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator FruR YP_069218.1 812710 D 273123 CDS YP_069219.1 51595028 2957042 complement(813851..814291) 1 NC_006155.1 similar to Yersinia pestis YPO0544 membrane protein (100% evalue=1.E-79); Salmonella typhimurium STM2800 inner membrane protein (65.5% evalue=2.E-49); hypothetical protein 814291 ygaW 2957042 ygaW Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069219.1 813851 R 273123 CDS YP_069220.1 51595029 2956076 815393..815851 1 NC_006155.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 815851 mraZ 2956076 mraZ Yersinia pseudotuberculosis IP 32953 cell division protein MraZ YP_069220.1 815393 D 273123 CDS YP_069221.1 51595030 2956074 815854..816816 1 NC_006155.1 similar to Yersinia pestis YPO0547 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0080 yabC; Hypothetical protein (ORFB) (77.1% evalue=1.E-136); S-adenosyl-methyltransferase MraW 816816 mraW 2956074 mraW Yersinia pseudotuberculosis IP 32953 S-adenosyl-methyltransferase MraW YP_069221.1 815854 D 273123 CDS YP_069222.1 51595031 2955657 816813..817130 1 NC_006155.1 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 817130 ftsL 2955657 ftsL Yersinia pseudotuberculosis IP 32953 cell division protein FtsL YP_069222.1 816813 D 273123 CDS YP_069223.1 51595032 2955654 817196..818959 1 NC_006155.1 similar to Yersinia pestis YPO0549 ftsI, pbpB; penicillin-binding protein 3 (99.8% evalue=0); Escherichia coli ECs0088 septum formation protein FtsI (84.7% evalue=0); division specific transpeptidase, penicillin-binding protein 3 818959 ftsI 2955654 ftsI Yersinia pseudotuberculosis IP 32953 division specific transpeptidase, penicillin-binding protein 3 YP_069223.1 817196 D 273123 CDS YP_069224.1 51595033 2956102 818961..820433 1 NC_006155.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 820433 murE 2956102 murE Yersinia pseudotuberculosis IP 32953 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_069224.1 818961 D 273123 CDS YP_069225.1 51595034 2956103 820430..821806 1 NC_006155.1 deleted EC_number 6.3.2.15; similar to Yersinia pestis YPO0551 murF, mra; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligase (99.7% evalue=0); Escherichia coli b0086 murF, mra (69.6% evalue=1.E-175); UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 821806 murF 2956103 murF Yersinia pseudotuberculosis IP 32953 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_069225.1 820430 D 273123 CDS YP_069226.1 51595035 2956075 821800..822882 1 NC_006155.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 822882 mraY 2956075 mraY Yersinia pseudotuberculosis IP 32953 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_069226.1 821800 D 273123 CDS YP_069227.1 51595036 2956101 822885..824201 1 NC_006155.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 824201 murD 2956101 murD Yersinia pseudotuberculosis IP 32953 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_069227.1 822885 D 273123 CDS YP_069228.1 51595037 2955660 824201..825403 1 NC_006155.1 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 825403 ftsW 2955660 ftsW Yersinia pseudotuberculosis IP 32953 cell division protein FtsW YP_069228.1 824201 D 273123 CDS YP_069229.1 51595038 2956104 825400..826470 1 NC_006155.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 826470 murG 2956104 murG Yersinia pseudotuberculosis IP 32953 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_069229.1 825400 D 273123 CDS YP_069230.1 51595039 2956100 826608..828083 1 NC_006155.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 828083 murC 2956100 murC Yersinia pseudotuberculosis IP 32953 UDP-N-acetylmuramate--L-alanine ligase YP_069230.1 826608 D 273123 CDS YP_069231.1 51595040 2955442 828076..828996 1 NC_006155.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 828996 ddl 2955442 ddl Yersinia pseudotuberculosis IP 32953 D-alanine--D-alanine ligase YP_069231.1 828076 D 273123 CDS YP_069232.1 51595041 2955659 828998..829825 1 NC_006155.1 involved in septum formation; cell division protein FtsQ 829825 ftsQ 2955659 ftsQ Yersinia pseudotuberculosis IP 32953 cell division protein FtsQ YP_069232.1 828998 D 273123 CDS YP_069233.1 51595042 2955651 829852..831108 1 NC_006155.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 831108 ftsA 2955651 ftsA Yersinia pseudotuberculosis IP 32953 cell division protein FtsA YP_069233.1 829852 D 273123 CDS YP_069234.1 51595043 2955663 831181..832332 1 NC_006155.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 832332 ftsZ 2955663 ftsZ Yersinia pseudotuberculosis IP 32953 cell division protein FtsZ YP_069234.1 831181 D 273123 CDS YP_069235.1 51595044 2955968 832429..833352 1 NC_006155.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 833352 lpxC 2955968 lpxC Yersinia pseudotuberculosis IP 32953 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_069235.1 832429 D 273123 CDS YP_069236.1 51595045 2953335 complement(833519..834049) 1 NC_006155.1 similar to Yersinia pestis YPO0562 conserved hypothetical protein (100% evalue=1.E-92); Vibrio cholerae VC2395 hypothetical protein (34.1% evalue=1.E-14); hypothetical protein 834049 2953335 YPTB0695 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069236.1 833519 R 273123 CDS YP_069237.2 161760589 2956587 834072..834605 1 NC_006155.1 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 834605 secM 2956587 secM Yersinia pseudotuberculosis IP 32953 SecA regulator SecM YP_069237.2 834072 D 273123 CDS YP_069238.1 51595047 2956581 834683..837397 1 NC_006155.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 837397 secA 2956581 secA Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecA YP_069238.1 834683 D 273123 CDS YP_069239.1 51595048 2956110 837692..838078 1 NC_006155.1 similar to Yersinia pestis YPO0565 mutT; mutator protein MutT (100% evalue=1.E-69); Salmonella typhimurium STM0137 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP (65% evalue=6.E-40); nucleoside triphosphate pyrophosphohydrolase 838078 mutT 2956110 mutT Yersinia pseudotuberculosis IP 32953 nucleoside triphosphate pyrophosphohydrolase YP_069239.1 837692 D 273123 CDS YP_069240.1 51595049 2956714 838293..838751 1 NC_006155.1 similar to Yersinia pestis YPO3968 tnp; transposase for the IS1541 insertion element (100% evalue=1.E-88); transposase 838751 tnpA 2956714 tnpA Yersinia pseudotuberculosis IP 32953 transposase YP_069240.1 838293 D 273123 CDS YP_069241.1 51595050 2956921 complement(838941..839147) 1 NC_006155.1 similar to Yersinia pestis YPO3432 conserved hypothetical protein (100% evalue=2.E-37); Escherichia coli ECs0105 hypothetical protein (80.3% evalue=4.E-25); zinc-binding protein 839147 yacG 2956921 yacG Yersinia pseudotuberculosis IP 32953 zinc-binding protein YP_069241.1 838941 R 273123 CDS YP_069242.1 51595051 2956920 complement(839355..840107) 1 NC_006155.1 similar to Yersinia pestis YPO3431 conserved hypothetical protein (100% evalue=1.E-140); Salmonella typhi STY0161 yacF; conserved hypothetical protein (69.9% evalue=2.E-95); hypothetical protein 840107 yacF 2956920 yacF Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069242.1 839355 R 273123 CDS YP_069243.1 51595052 2955345 complement(840104..840724) 1 NC_006155.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 840724 coaE 2955345 coaE Yersinia pseudotuberculosis IP 32953 dephospho-CoA kinase YP_069243.1 840104 R 273123 CDS YP_069244.1 51595053 2955764 841020..842063 1 NC_006155.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 842063 guaC 2955764 guaC Yersinia pseudotuberculosis IP 32953 guanosine 5'-monophosphate oxidoreductase YP_069244.1 841020 D 273123 CDS YP_069245.1 51595054 2953336 842257..843465 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 843465 2953336 YPTB0704 Yersinia pseudotuberculosis IP 32953 transposase YP_069245.1 842257 D 273123 CDS YP_069246.1 51595055 2955817 complement(843886..845085) 1 NC_006155.1 similar to Yersinia pestis YPO3427 hofC, hopC; type II secretion system protein (99.4% evalue=0); Salmonella typhimurium STM0142 hofC; component in type IV pilin biogenesis (38.4% evalue=8.E-77); type IV pilin biogenesis protein 845085 hofC 2955817 hofC Yersinia pseudotuberculosis IP 32953 type IV pilin biogenesis protein YP_069246.1 843886 R 273123 CDS YP_069247.1 51595056 2955816 complement(845082..846620) 1 NC_006155.1 similar to Yersinia pestis YPO3426 hofB, hopB; type II secretion system protein (99.8% evalue=0); Escherichia coli Z0117 hofB; integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake (45.3% evalue=1.E-112); hypothetical protein 846620 hofB 2955816 hofB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069247.1 845082 R 273123 CDS YP_069248.1 51595057 2956305 complement(846613..847077) 1 NC_006155.1 similar to Yersinia pestis YPO3425 ppdD; prepilin peptidase dependent protein D precursor (100% evalue=9.E-83); Escherichia coli Z0118 ppdD; prelipin peptidase dependent protein (57.4% evalue=4.E-42); major pilin subunit 847077 ppdD 2956305 ppdD Yersinia pseudotuberculosis IP 32953 major pilin subunit YP_069248.1 846613 R 273123 CDS YP_069249.1 51595058 2956115 complement(847280..848188) 1 NC_006155.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase 848188 nadC 2956115 nadC Yersinia pseudotuberculosis IP 32953 quinolinate phosphoribosyltransferase YP_069249.1 847280 R 273123 CDS YP_069250.1 51595059 2955189 848301..848852 1 NC_006155.1 similar to Yersinia pestis YPO3423 ampD; signalling protein in beta-lactamase regulation (100% evalue=1.E-105); Escherichia coli b0110 ampD; ampD protein (65% evalue=1.E-68); N-acetyl-anhydromuranmyl-L-alanine amidase 848852 ampD 2955189 ampD Yersinia pseudotuberculosis IP 32953 N-acetyl-anhydromuranmyl-L-alanine amidase YP_069250.1 848301 D 273123 CDS YP_069251.1 51595060 2955190 849125..849979 1 NC_006155.1 involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 849979 ampE 2955190 ampE Yersinia pseudotuberculosis IP 32953 regulatory protein AmpE YP_069251.1 849125 D 273123 CDS YP_069252.1 51595061 2955230 complement(850381..851778) 1 NC_006155.1 similar to Yersinia pestis YPO3421 aroP; aromatic amino acid transport protein (99.7% evalue=0); amino acid APC transporter 851778 aroP 2955230 aroP Yersinia pseudotuberculosis IP 32953 amino acid APC transporter YP_069252.1 850381 R 273123 CDS YP_069253.1 51595062 2956221 852641..853405 1 NC_006155.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 853405 pdhR 2956221 pdhR Yersinia pseudotuberculosis IP 32953 transcriptional regulator PdhR YP_069253.1 852641 D 273123 CDS YP_069254.1 51595063 2955161 853601..856264 1 NC_006155.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 856264 aceE 2955161 aceE Yersinia pseudotuberculosis IP 32953 pyruvate dehydrogenase subunit E1 YP_069254.1 853601 D 273123 CDS YP_069255.1 51595064 2955162 856278..857852 1 NC_006155.1 similar to Yersinia pestis YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (96.7% evalue=0); Escherichia coli JW0111 aceF; Dihydrolipoamide S-acetyltransferase (81.1% evalue=0); dihydrolipoamide acetyltransferase 857852 aceF 2955162 aceF Yersinia pseudotuberculosis IP 32953 dihydrolipoamide acetyltransferase YP_069255.1 856278 D 273123 CDS YP_069256.1 51595065 2955963 858155..859582 1 NC_006155.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 859582 lpdA 2955963 lpdA Yersinia pseudotuberculosis IP 32953 dihydrolipoamide dehydrogenase YP_069256.1 858155 D 273123 CDS YP_069257.1 51595066 2955166 860142..862739 1 NC_006155.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 862739 acnB 2955166 acnB Yersinia pseudotuberculosis IP 32953 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_069257.1 860142 D 273123 CDS YP_069258.1 51595067 2953337 863038..863397 1 NC_006155.1 similar to Yersinia pestis YPO3414 conserved hypothetical protein (100% evalue=6.E-67); Salmonella typhi STY0182 conserved hypothetical protein (69.7% evalue=1.E-47); hypothetical protein 863397 2953337 YPTB0717 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069258.1 863038 D 273123 CDS YP_069259.1 51595068 2956987 complement(863522..864409) 1 NC_006155.1 similar to Yersinia pestis YPO3413 yddG; membrane protein (97.3% evalue=1.E-168); Escherichia coli ECs2077 hypothetical protein (42.1% evalue=2.E-63); hypothetical protein 864409 yddG 2956987 yddG Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069259.1 863522 R 273123 CDS YP_069260.1 51595069 2956625 complement(864847..865641) 1 NC_006155.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 865641 speD 2956625 speD Yersinia pseudotuberculosis IP 32953 S-adenosylmethionine decarboxylase YP_069260.1 864847 R 273123 CDS YP_069261.1 51595070 2956626 complement(865719..866609) 1 NC_006155.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 866609 speE 2956626 speE Yersinia pseudotuberculosis IP 32953 spermidine synthase YP_069261.1 865719 R 273123 CDS YP_069262.1 51595071 2956919 complement(866726..867073) 1 NC_006155.1 similar to Yersinia pestis YPO3410 yacC; exported protein (100% evalue=3.E-61); Escherichia coli ECs0126 hypothetical protein (71.1% evalue=2.E-40); hypothetical protein 867073 yacC 2956919 yacC Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069262.1 866726 R 273123 CDS YP_069263.1 51595072 2956922 867390..868991 1 NC_006155.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 868991 yacK 2956922 yacK Yersinia pseudotuberculosis IP 32953 multicopper oxidase YP_069263.1 867390 D 273123 CDS YP_069264.1 51595073 2955833 869211..869747 1 NC_006155.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 869747 hpt 2955833 hpt Yersinia pseudotuberculosis IP 32953 hypoxanthine-guanine phosphoribosyltransferase YP_069264.1 869211 D 273123 CDS YP_069265.1 51595074 2956925 complement(870055..870717) 1 NC_006155.1 similar to Yersinia pestis YPO3407 yadF; carbonic anhydrase (100% evalue=1.E-127); Escherichia coli b0126 yadF; carbonic anhydrase (73.1% evalue=3.E-93); carbonic anhydrase 870717 yadF 2956925 yadF Yersinia pseudotuberculosis IP 32953 carbonic anhydrase YP_069265.1 870055 R 273123 CDS YP_069266.1 51595075 2956926 870953..871879 1 NC_006155.1 similar to Yersinia pestis YPO3406 yadG; ABC transporter, ATP-binding protein (99.6% evalue=1.E-171); Salmonella typhimurium STM0172 yadG; ABC-type multidrug transport system, ATPase component (82.4% evalue=1.E-142); drug efflux ABC transporter ATP-binding protein 871879 yadG 2956926 yadG Yersinia pseudotuberculosis IP 32953 drug efflux ABC transporter ATP-binding protein YP_069266.1 870953 D 273123 CDS YP_069267.1 51595076 2956927 871876..872646 1 NC_006155.1 similar to Yersinia pestis YPO3405 yadH; ABC transporter, integral membrane protein (100% evalue=1.E-144); Salmonella typhimurium STM0173 yadH; ABC superfamily (membrane) transport protein (80% evalue=1.E-118); drug efflux ABC transporter permease 872646 yadH 2956927 yadH Yersinia pseudotuberculosis IP 32953 drug efflux ABC transporter permease YP_069267.1 871876 D 273123 CDS YP_069268.1 51595077 2956924 872968..874161 1 NC_006155.1 similar to Yersinia pestis YPO3404 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0179 yadE; xylanase/chitin deacetylase (65.7% evalue=1.E-150); hypothetical protein 874161 yadE 2956924 yadE Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069268.1 872968 D 273123 CDS YP_069269.1 51595078 2956209 complement(874325..874705) 1 NC_006155.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 874705 panD 2956209 panD Yersinia pseudotuberculosis IP 32953 aspartate alpha-decarboxylase YP_069269.1 874325 R 273123 CDS YP_069270.1 51595079 2956208 complement(875116..875970) 1 NC_006155.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 875970 panC 2956208 panC Yersinia pseudotuberculosis IP 32953 pantoate--beta-alanine ligase YP_069270.1 875116 R 273123 CDS YP_069271.1 51595080 2956207 complement(876058..876858) 1 NC_006155.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 876858 panB 2956207 panB Yersinia pseudotuberculosis IP 32953 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_069271.1 876058 R 273123 CDS YP_069272.1 51595081 2955635 complement(877124..877603) 1 NC_006155.1 similar to Yersinia pestis YPO3400 folK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (100% evalue=4.E-88); Salmonella typhimurium STM0183 folK; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, PPPK (70.9% evalue=1.E-55); 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 877603 folK 2955635 folK Yersinia pseudotuberculosis IP 32953 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_069272.1 877124 R 273123 CDS YP_069273.2 161760588 2956218 complement(877611..879077) 1 NC_006155.1 Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase 879077 pcnB 2956218 pcnB Yersinia pseudotuberculosis IP 32953 poly(A) polymerase YP_069273.2 877611 R 273123 CDS YP_069274.1 51595083 2956923 complement(879166..880161) 1 NC_006155.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 880161 yadB 2956923 yadB Yersinia pseudotuberculosis IP 32953 glutamyl-Q tRNA(Asp) synthetase YP_069274.1 879166 R 273123 CDS YP_069275.1 51595084 2955462 complement(880441..880896) 1 NC_006155.1 similar to Yersinia pestis YPO3397 dksA; DnaK suppressor protein homologue (100% evalue=1.E-82); Salmonella typhi STY0211 dksA; dosage-dependent dnaK suppressor protein (96% evalue=2.E-79); RNA polymerase-binding transcription factor 880896 dksA 2955462 dksA Yersinia pseudotuberculosis IP 32953 RNA polymerase-binding transcription factor YP_069275.1 880441 R 273123 CDS YP_069276.1 51595085 2956600 complement(881066..881824) 1 NC_006155.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 881824 sfsA 2956600 sfsA Yersinia pseudotuberculosis IP 32953 sugar fermentation stimulation protein A YP_069276.1 881066 R 273123 CDS YP_069277.1 51595086 2955948 complement(881937..882512) 1 NC_006155.1 similar to Yersinia pestis YPO3395 ligT; 2'-5' RNA ligase (99.4% evalue=1.E-108); Escherichia coli JW0143 ligT; 2'-5' RNA ligase (58.1% evalue=5.E-56); 2'-5' RNA ligase 882512 ligT 2955948 ligT Yersinia pseudotuberculosis IP 32953 2'-5' RNA ligase YP_069277.1 881937 R 273123 CDS YP_069278.2 161760587 2955834 882556..885156 1 NC_006155.1 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 885156 hrp 2955834 hrp Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase HrpB YP_069278.2 882556 D 273123 CDS YP_069279.1 51595088 2956078 885265..887745 1 NC_006155.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 887745 mrcB 2956078 mrcB Yersinia pseudotuberculosis IP 32953 penicillin-binding protein 1b YP_069279.1 885265 D 273123 CDS YP_069280.1 51595089 2955548 888067..888861 1 NC_006155.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 888861 fhuC 2955548 fhuC Yersinia pseudotuberculosis IP 32953 iron-hydroxamate transporter ATP-binding subunit YP_069280.1 888067 D 273123 CDS YP_069281.2 161760586 2955549 888861..889913 1 NC_006155.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 889913 fhuD 2955549 fhuD Yersinia pseudotuberculosis IP 32953 iron-hydroxamate transporter substrate-binding subunit YP_069281.2 888861 D 273123 CDS YP_069282.1 51595091 2955547 889910..891907 1 NC_006155.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 891907 fhuB 2955547 fhuB Yersinia pseudotuberculosis IP 32953 iron-hydroxamate transporter permease subunit YP_069282.1 889910 D 273123 CDS YP_069283.1 51595092 2955781 complement(892281..893561) 1 NC_006155.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 893561 hemL 2955781 hemL Yersinia pseudotuberculosis IP 32953 glutamate-1-semialdehyde aminotransferase YP_069283.1 892281 R 273123 CDS YP_069284.2 161760585 2956928 893942..895378 1 NC_006155.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 895378 yadQ 2956928 yadQ Yersinia pseudotuberculosis IP 32953 chloride channel protein YP_069284.2 893942 D 273123 CDS YP_069285.1 51595094 2956929 895514..895858 1 NC_006155.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 895858 yadR 2956929 yadR Yersinia pseudotuberculosis IP 32953 iron-sulfur cluster insertion protein ErpA YP_069285.1 895514 D 273123 CDS YP_069286.1 51595095 2956930 complement(896143..896757) 1 NC_006155.1 similar to Yersinia pestis YPO3386 yadS; membrane protein (100% evalue=1.E-112); Salmonella typhimurium STM0205 yadS; inner membrane protein (87.1% evalue=1.E-98); hypothetical protein 896757 yadS 2956930 yadS Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069286.1 896143 R 273123 CDS YP_069287.1 51595096 2956931 complement(896757..897599) 1 NC_006155.1 solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF 897599 yadT 2956931 yadT Yersinia pseudotuberculosis IP 32953 vitamin B12-transporter protein BtuF YP_069287.1 896757 R 273123 CDS YP_069288.1 51595097 2956093 complement(897599..898300) 1 NC_006155.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 898300 mtn 2956093 mtn Yersinia pseudotuberculosis IP 32953 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_069288.1 897599 R 273123 CDS YP_069289.1 51595098 2955457 898611..900131 1 NC_006155.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 900131 dgt 2955457 dgt Yersinia pseudotuberculosis IP 32953 deoxyguanosinetriphosphate triphosphohydrolase YP_069289.1 898611 D 273123 CDS YP_069290.1 51595099 2955846 900329..901774 1 NC_006155.1 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 901774 htrA 2955846 htrA Yersinia pseudotuberculosis IP 32953 serine endoprotease YP_069290.1 900329 D 273123 CDS YP_069291.1 51595100 2955271 complement(901933..904761) 1 NC_006155.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 904761 barA 2955271 barA Yersinia pseudotuberculosis IP 32953 hybrid sensory histidine kinase BarA YP_069291.1 901933 R 273123 CDS YP_069292.1 51595101 2956423 905205..907439 1 NC_006155.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 907439 relA 2956423 relA Yersinia pseudotuberculosis IP 32953 GDP/GTP pyrophosphokinase YP_069292.1 905205 D 273123 CDS YP_069293.1 51595102 2953338 907489..907653 1 NC_006155.1 similar to Yersinia pestis YPO3379 hypothetical protein.; hypothetical protein 907653 2953338 YPTB0752 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069293.1 907489 D 273123 CDS YP_069294.1 51595103 2956003 907660..908502 1 NC_006155.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 908502 mazG 2956003 mazG Yersinia pseudotuberculosis IP 32953 nucleoside triphosphate pyrophosphohydrolase YP_069294.1 907660 D 273123 CDS YP_069295.1 51595104 2956389 908714..910351 1 NC_006155.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 910351 pyrG 2956389 pyrG Yersinia pseudotuberculosis IP 32953 CTP synthetase YP_069295.1 908714 D 273123 CDS YP_069296.1 51595105 2955507 910432..911727 1 NC_006155.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 911727 eno 2955507 eno Yersinia pseudotuberculosis IP 32953 phosphopyruvate hydratase YP_069296.1 910432 D 273123 CDS YP_069297.1 51595106 2956620 912099..912668 1 NC_006155.1 similar to Yersinia pestis YPO3375 sodC; superoxide dismutase [Cu-Zn] precursor (94% evalue=1.E-105); Salmonella typhimurium STM1044 sodC; Gifsy-2 prophage: superoxide dismutase precursor (Cu-Zn) (72.2% evalue=3.E-71); superoxide dismutase (Cu-Zn) 912668 sodC 2956620 sodC Yersinia pseudotuberculosis IP 32953 superoxide dismutase (Cu-Zn) YP_069297.1 912099 D 273123 CDS YP_069298.1 51595107 2957047 912772..913443 1 NC_006155.1 similar to Yersinia pestis YPO3374 conserved hypothetical protein (100% evalue=1.E-128); Salmonella typhi STY3080 conserved hypothetical protein (79.8% evalue=1.E-105); coenzyme PQQ synthesis protein 913443 ygcF 2957047 ygcF Yersinia pseudotuberculosis IP 32953 coenzyme PQQ synthesis protein YP_069298.1 912772 D 273123 CDS YP_069299.1 51595108 2957048 complement(913520..913879) 1 NC_006155.1 similar to Yersinia pestis YPO3373 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase family protein (100% evalue=1.E-68); Escherichia coli JW2735 ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (83.1% evalue=3.E-59); 6-pyruvoyl tetrahydrobiopterin synthase 913879 ygcM 2957048 ygcM Yersinia pseudotuberculosis IP 32953 6-pyruvoyl tetrahydrobiopterin synthase YP_069299.1 913520 R 273123 CDS YP_069300.1 51595109 2955407 914272..916128 1 NC_006155.1 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha 916128 cysJ 2955407 cysJ Yersinia pseudotuberculosis IP 32953 sulfite reductase subunit alpha YP_069300.1 914272 D 273123 CDS YP_069301.1 51595110 2955406 916128..917858 1 NC_006155.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 917858 cysI 2955406 cysI Yersinia pseudotuberculosis IP 32953 sulfite reductase subunit beta YP_069301.1 916128 D 273123 CDS YP_069302.1 51595111 2955405 917855..918589 1 NC_006155.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 918589 cysH 2955405 cysH Yersinia pseudotuberculosis IP 32953 phosphoadenosine phosphosulfate reductase YP_069302.1 917855 D 273123 CDS YP_069303.1 51595112 2953339 complement(918832..919239) 1 NC_006155.1 similar to Yersinia pestis YPO3369 conserved hypothetical protein (100% evalue=7.E-75); hypothetical protein 919239 2953339 YPTB0762 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069303.1 918832 R 273123 CDS YP_069304.1 51595113 2953340 complement(919414..919614) 1 NC_006155.1 similar to Yersinia pestis conserved hypothetical protein emb|CAC90635.1| (AJ414150) (122 aa), evalue=2e-05, 39.6% identity in 63 aa, and to Rhizobium meliloti (Sinorhizobium meliloti) hypothetical protein SMC04441 swall|Q92K60| (62 aa), evalue=2e-05, 35.; hypothetical protein 919614 2953340 YPTB0763 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069304.1 919414 R 273123 CDS YP_069305.1 51595114 2955403 920227..921645 1 NC_006155.1 similar to Yersinia pestis YPO3367 cysG; siroheme synthase (99.5% evalue=0); Neisseria meningitidis NMB1194 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase (60% evalue=1.E-153); siroheme synthase 921645 cysG 2955403 cysG Yersinia pseudotuberculosis IP 32953 siroheme synthase YP_069305.1 920227 D 273123 CDS YP_069306.1 51595115 2955401 921656..922564 1 NC_006155.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 922564 cysD 2955401 cysD Yersinia pseudotuberculosis IP 32953 sulfate adenylyltransferase subunit 2 YP_069306.1 921656 D 273123 CDS YP_069307.1 51595116 2955411 922657..924093 1 NC_006155.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 924093 cysN 2955411 cysN Yersinia pseudotuberculosis IP 32953 sulfate adenylyltransferase subunit 1 YP_069307.1 922657 D 273123 CDS YP_069308.1 51595117 2955400 924095..924736 1 NC_006155.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 924736 cysC 2955400 cysC Yersinia pseudotuberculosis IP 32953 adenylylsulfate kinase YP_069308.1 924095 D 273123 CDS YP_069309.1 51595118 2957044 924927..925244 1 NC_006155.1 similar to Yersinia pestis YPO3363 ygbE; membrane protein (100% evalue=5.E-58); Salmonella typhimurium STM2932 ygbE; inner membrane protein (53.9% evalue=4.E-24); hypothetical protein 925244 ygbE 2957044 ygbE Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069309.1 924927 D 273123 CDS YP_069310.1 51595119 2957046 925561..925881 1 NC_006155.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 925881 ftsB 2957046 ftsB Yersinia pseudotuberculosis IP 32953 cell division protein FtsB YP_069310.1 925561 D 273123 CDS YP_069311.1 51595120 2955900 925885..926610 1 NC_006155.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 926610 ispD 2955900 ispD Yersinia pseudotuberculosis IP 32953 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_069311.1 925885 D 273123 CDS YP_069312.1 51595121 2955901 926749..927237 1 NC_006155.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 927237 ispF 2955901 ispF Yersinia pseudotuberculosis IP 32953 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_069312.1 926749 D 273123 CDS YP_069313.1 51595122 2957045 927248..928297 1 NC_006155.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 928297 truD 2957045 truD Yersinia pseudotuberculosis IP 32953 tRNA pseudouridine synthase D YP_069313.1 927248 D 273123 CDS YP_069314.1 51595123 2956654 928275..929039 1 NC_006155.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 929039 surE 2956654 surE Yersinia pseudotuberculosis IP 32953 stationary phase survival protein SurE YP_069314.1 928275 D 273123 CDS YP_069315.1 51595124 2956217 929033..929659 1 NC_006155.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 929659 pcm 2956217 pcm Yersinia pseudotuberculosis IP 32953 protein-L-isoaspartate O-methyltransferase YP_069315.1 929033 D 273123 CDS YP_069316.1 51595125 2956146 929763..930764 1 NC_006155.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 930764 nlpD 2956146 nlpD Yersinia pseudotuberculosis IP 32953 lipoprotein NlpD YP_069316.1 929763 D 273123 CDS YP_069317.1 51595126 2956527 930819..931817 1 NC_006155.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 931817 rpoS 2956527 rpoS Yersinia pseudotuberculosis IP 32953 RNA polymerase sigma factor RpoS YP_069317.1 930819 D 273123 CDS YP_069318.1 51595127 2956715 complement(932043..933251) 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase-like protein 933251 tnpA 2956715 tnpA Yersinia pseudotuberculosis IP 32953 transposase-like protein YP_069318.1 932043 R 273123 CDS YP_069319.1 51595128 2956109 complement(933577..936132) 1 NC_006155.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 936132 mutS 2956109 mutS Yersinia pseudotuberculosis IP 32953 DNA mismatch repair protein MutS YP_069319.1 933577 R 273123 CDS YP_069320.1 51595129 2956486 complement(936975..937430) 1 NC_006155.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 937430 rpiB 2956486 rpiB Yersinia pseudotuberculosis IP 32953 ribose-5-phosphate isomerase B YP_069320.1 936975 R 273123 CDS YP_069321.1 51595130 2956996 937913..939028 1 NC_006155.1 similar to Yersinia pestis YPO3352 ydjJ; Zinc-binding dehydrogenase (100% evalue=0); Zinc-binding dehydrogenase 939028 ydjJ 2956996 ydjJ Yersinia pseudotuberculosis IP 32953 Zinc-binding dehydrogenase YP_069321.1 937913 D 273123 CDS YP_069322.1 51595131 2953341 939092..939862 1 NC_006155.1 similar to Yersinia pestis YPO3351 dehydrogenase (100% evalue=1.E-144); Listeria innocua lin0362 similar to dehydrogenase/reductase (54.7% evalue=5.E-78); short chain dehydrogenase 939862 2953341 YPTB0781 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_069322.1 939092 D 273123 CDS YP_069323.1 51595132 2953342 939949..940950 1 NC_006155.1 similar to Yersinia pestis YPO3350 dhaK, ycgT; dihydroxyacetone kinase (100% evalue=0); Sinorhizobium meliloti SMb20314 dihydroxyacetone kinase (63.3% evalue=1.E-115); dihydroxyacetone kinase 940950 2953342 YPTB0782 Yersinia pseudotuberculosis IP 32953 dihydroxyacetone kinase YP_069323.1 939949 D 273123 CDS YP_069324.1 51595133 2953343 940957..941631 1 NC_006155.1 similar to Yersinia pestis YPO3349 conserved hypothetical protein (99.5% evalue=1.E-122); Sinorhizobium meliloti SMb20313 dihydroxyacetone kinase (57.2% evalue=4.E-59); dihydroxyacetone kinase 941631 2953343 YPTB0783 Yersinia pseudotuberculosis IP 32953 dihydroxyacetone kinase YP_069324.1 940957 D 273123 CDS YP_069325.1 51595134 2953344 complement(941752..942711) 1 NC_006155.1 similar to Yersinia pestis YPO3348 transcriptional regulatory protein (100% evalue=1.E-179); Pasteurella multocida PM1646 SmoC-like regulatory protein (68.4% evalue=1.E-124); transcriptional regulator 942711 2953344 YPTB0784 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069325.1 941752 R 273123 CDS YP_069326.1 51595135 2955233 complement(943278..944567) 1 NC_006155.1 similar to Yersinia pestis YPO3347 arsB, arsF; arsenical pump membrane protein (99.7% evalue=0); Escherichia coli Z4904 arsB; arsenical pump membrane protein (83.9% evalue=0); arsenical efflux pump/H+ antiporter, arsB 944567 arsB 2955233 arsB Yersinia pseudotuberculosis IP 32953 arsenical efflux pump/H+ antiporter, arsB YP_069326.1 943278 R 273123 CDS YP_069327.1 51595136 2955234 complement(944652..944993) 1 NC_006155.1 regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR 944993 arsR 2955234 arsR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor ArsR YP_069327.1 944652 R 273123 CDS YP_069328.1 51595137 2953345 complement(945240..945518) 1 NC_006155.1 similar to Yersinia pestis YPO3345 hypothetical protein (98.9% evalue=3.E-48); hypothetical protein 945518 2953345 YPTB0787 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069328.1 945240 R 273123 CDS YP_069329.1 51595138 2953346 complement(945714..945920) 1 NC_006155.1 similar to Yersinia pestis YPO3344 hypothetical protein. 100% identical; hypothetical protein 945920 2953346 YPTB0788 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069329.1 945714 R 273123 CDS YP_069330.1 51595139 2953347 complement(946341..947111) 1 NC_006155.1 similar to Yersinia pestis YPO3343 probable extracellular solute-binding protein (99.2% evalue=1.E-142); Pseudomonas aeruginosa PA3475 pheC; cyclohexadienyl dehydratase precursor (prephenate dehydratase / arogenate dehydratase) (38% evalue=1.E-36); amino acid ABC transporter substrate-binding protein 947111 2953347 YPTB0789 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter substrate-binding protein YP_069330.1 946341 R 273123 CDS YP_069331.1 51595140 2957068 complement(947176..948555) 1 NC_006155.1 similar to Yersinia pestis YPO3342 yhjA; cytochrome C peroxidase (99.5% evalue=0); Escherichia coli b3518 yhjA; probable cytochrome C peroxidase (56.1% evalue=1.E-140); cytochrome C peroxidase 948555 yhjA 2957068 yhjA Yersinia pseudotuberculosis IP 32953 cytochrome C peroxidase YP_069331.1 947176 R 273123 CDS YP_069332.1 51595141 2953348 complement(948792..949046) 1 NC_006155.1 hypothetical protein 949046 2953348 YPTB0791 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069332.1 948792 R 273123 CDS YP_069333.1 51595142 2953349 949215..951311 1 NC_006155.1 similar to Escherichia coli ECs1360 Iha adhesin (56.2% evalue=0); Escherichia coli Z1617 receptor (56.2% evalue=0); exogenous ferric siderophore receptor; Iha adhesin 951311 2953349 YPTB0792 Yersinia pseudotuberculosis IP 32953 exogenous ferric siderophore receptor; Iha adhesin YP_069333.1 949215 D 273123 CDS YP_069334.1 51595143 2953350 951753..952940 1 NC_006155.1 similar to Yersinia pestis YPO3339 hypothetical protein (100% evalue=0); hypothetical protein 952940 2953350 YPTB0793 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069334.1 951753 D 273123 CDS YP_069335.1 51595144 2956001 complement(953280..954065) 1 NC_006155.1 similar to Yersinia pestis YPO3337 map; methionine aminopeptidase (100% evalue=1.E-150); Xylella fastidiosa XF0111 methionine aminopeptidase (62.6% evalue=1.E-91); methionine aminopeptidase 954065 map 2956001 map Yersinia pseudotuberculosis IP 32953 methionine aminopeptidase YP_069335.1 953280 R 273123 CDS YP_069336.1 51595145 2953351 complement(954062..954367) 1 NC_006155.1 similar to Yersinia pestis YPO3336 conserved hypothetical protein (100% evalue=2.E-41); hypothetical protein 954367 2953351 YPTB0795 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069336.1 954062 R 273123 CDS YP_069337.1 51595146 2955664 complement(954497..956140) 1 NC_006155.1 similar to Yersinia pestis YPO3335 fumA, fumB; fumarate hydratase, class I (100% evalue=0); Escherichia coli JW1604 fumA; fumarate hydratase, class I (86.4% evalue=0); fumarase A (fumarate hydratase class I), aerobic isozyme 956140 fumA 2955664 fumA Yersinia pseudotuberculosis IP 32953 fumarase A (fumarate hydratase class I), aerobic isozyme YP_069337.1 954497 R 273123 CDS YP_069338.1 51595147 2956606 complement(956538..958034) 1 NC_006155.1 similar to Yersinia pestis YPO3334 sgbK, lyx, lyxK, xylK; L-xylulose kinase (99.5% evalue=0); Escherichia coli JW3552 lyxK; Cryptic L-xylulose kinase (L-xylulokinase) (42.8% evalue=1.E-114); L-xylulose kinase 958034 sgbK 2956606 sgbK Yersinia pseudotuberculosis IP 32953 L-xylulose kinase YP_069338.1 956538 R 273123 CDS YP_069339.1 51595148 2956607 complement(958045..958926) 1 NC_006155.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; L-xylulose 5-phosphate 3-epimerase 958926 sgbU 2956607 sgbU Yersinia pseudotuberculosis IP 32953 L-xylulose 5-phosphate 3-epimerase YP_069339.1 958045 R 273123 CDS YP_069340.1 51595149 2953352 complement(959107..960168) 1 NC_006155.1 similar to Yersinia pestis YPO3332 sugar ABC transporter, permease (100% evalue=0); Sinorhizobium meliloti SMb20487 sugar ABC transporter permease (49.1% evalue=1.E-75); sugar ABC transporter permease 960168 2953352 YPTB0799 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069340.1 959107 R 273123 CDS YP_069341.1 51595150 2953353 complement(960181..961170) 1 NC_006155.1 similar to Yersinia pestis YPO3331 sugar ABC transporter, permease (100% evalue=1.E-180); Escherichia coli Z0418 permease component of transport system, probably ribose specific (44.6% evalue=2.E-72); sugar ABC transporter permease 961170 2953353 YPTB0800 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069341.1 960181 R 273123 CDS YP_069342.1 51595151 2953354 complement(961163..962677) 1 NC_006155.1 similar to Yersinia pestis YPO3634 ABC transporter ATP binding protein (54.3% evalue=1.E-147); sugar ABC transporter ATPase 962677 2953354 YPTB0801 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_069342.1 961163 R 273123 CDS YP_069343.1 51595152 2953355 complement(962826..963833) 1 NC_006155.1 similar to Yersinia pestis YPO3328 sugar ABC transporter, periplasmic protein (99.4% evalue=0); Agrobacterium tumefaciens AGR_L_271 periplasmic binding protein, probable substrate ribose (60.5% evalue=2.E-98); sugar ABC transporter substrate-binding protein 963833 2953355 YPTB0802 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069343.1 962826 R 273123 CDS YP_069344.1 51595153 2953356 complement(963991..964800) 1 NC_006155.1 similar to Yersinia pestis YPO3327 fucR; deoR-family regulatory protein (99.2% evalue=1.E-150); B. halodurans BH1553 transcriptional regulator (DeoR family) (35.9% evalue=1.E-42); DeoR family transcriptional regulator 964800 2953356 YPTB0803 Yersinia pseudotuberculosis IP 32953 DeoR family transcriptional regulator YP_069344.1 963991 R 273123 CDS YP_069345.1 51595154 2955205 965521..966216 1 NC_006155.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 966216 araD 2955205 araD Yersinia pseudotuberculosis IP 32953 L-ribulose-5-phosphate 4-epimerase YP_069345.1 965521 D 273123 CDS YP_069346.1 51595155 2955465 966666..969116 1 NC_006155.1 similar to Yersinia pestis YPO3325 dmsA; anaerobic dimethyl sulfoxide reductase chain A (99.8% evalue=0); Salmonella typhimurium STM0964 dmsA; anaerobic dimethyl sulfoxide reductase, subunit A (80.3% evalue=0); anaerobic dimethyl sulfoxide reductase subunit A 969116 dmsA 2955465 dmsA Yersinia pseudotuberculosis IP 32953 anaerobic dimethyl sulfoxide reductase subunit A YP_069346.1 966666 D 273123 CDS YP_069347.1 51595156 2955466 969128..969745 1 NC_006155.1 similar to Yersinia pestis YPO3324 dmsB; anaerobic dimethyl sulfoxide reductase chain B (99.5% evalue=1.E-126); Salmonella typhimurium STM0965 dmsB; anaerobic dimethyl sulfoxide reductase, subunit B (85.8% evalue=1.E-112); anaerobic dimethyl sulfoxide reductase subunit B 969745 dmsB 2955466 dmsB Yersinia pseudotuberculosis IP 32953 anaerobic dimethyl sulfoxide reductase subunit B YP_069347.1 969128 D 273123 CDS YP_069348.1 51595157 2955468 969747..970607 1 NC_006155.1 similar to Yersinia pestis YPO3323 dmsC; anaerobic dimethyl sulfoxide reductase chain C (99.6% evalue=1.E-160); Salmonella typhimurium STM0966 dmsC; anaerobic dimethyl sulfoxide reductase, subunit C (67% evalue=1.E-106); anaerobic dimethyl sulfoxide reductase subunit C 970607 dmsC 2955468 dmsC Yersinia pseudotuberculosis IP 32953 anaerobic dimethyl sulfoxide reductase subunit C YP_069348.1 969747 D 273123 CDS YP_069349.1 51595158 2953357 970753..971463 1 NC_006155.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD 971463 2953357 YPTB0808 Yersinia pseudotuberculosis IP 32953 twin-argninine leader-binding protein DmsD YP_069349.1 970753 D 273123 CDS YP_069350.1 51595159 2955386 complement(971721..972251) 1 NC_006155.1 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; cytochrome b561 972251 cybB 2955386 cybB Yersinia pseudotuberculosis IP 32953 cytochrome b561 YP_069350.1 971721 R 273123 CDS YP_069351.1 51595160 2955387 complement(972398..972781) 1 NC_006155.1 similar to Yersinia pestis YPO3320 cybC; cytochrome B562 (98.4% evalue=5.E-66); Salmonella typhi STY4778 cybC; soluble cytochrome b562 (52.3% evalue=1.E-29); cytochrome b(562) 972781 cybC 2955387 cybC Yersinia pseudotuberculosis IP 32953 cytochrome b(562) YP_069351.1 972398 R 273123 CDS YP_069352.1 51595161 2955908 complement(972857..975070) 1 NC_006155.1 similar to Yersinia pestis YPO3319 katY; catalase-peroxidase (100% evalue=0); Sinorhizobium meliloti SMa2379 catalase/peroxidase (61.1% evalue=0); catalase 975070 katY 2955908 katY Yersinia pseudotuberculosis IP 32953 catalase YP_069352.1 972857 R 273123 CDS YP_069353.1 51595162 2953358 975606..976547 1 NC_006155.1 similar to Yersinia pestis YPO3318 sugar ABC transporter, periplasmic protein (99.6% evalue=1.E-173); Sinorhizobium meliloti SMb20349 probable ABC transporter sugar-binding protein (72.1% evalue=1.E-118); sugar ABC transporter substrate-binding protein 976547 2953358 YPTB0812 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069353.1 975606 D 273123 CDS YP_069354.1 51595163 2953359 976640..977257 1 NC_006155.1 similar to Yersinia pestis YPO3317 lipoprotein (100% evalue=1.E-111); Mesorhizobium loti mll7013 hypothetical protein (34.1% evalue=8.E-16); hypothetical protein 977257 2953359 YPTB0813 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069354.1 976640 D 273123 CDS YP_069355.1 51595164 2953360 977257..978780 1 NC_006155.1 similar to Yersinia pestis YPO3316 sugar ABC transporter, ATP-binding protein (99.6% evalue=0); Mesorhizobium loti mll7012 ribose ABC transporter, ATP-binding protein (54.2% evalue=1.E-144); sugar ABC transporter ATPase 978780 2953360 YPTB0814 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_069355.1 977257 D 273123 CDS YP_069356.1 51595165 2953361 978777..979904 1 NC_006155.1 similar to Yersinia pestis YPO3315 rbsC; sugar ABC transporter, permease (98.1% evalue=0); Sinorhizobium meliloti SMb20352 probable sugar ABC transporter permease (59.8% evalue=1.E-120); sugar ABC transporter permease 979904 2953361 YPTB0815 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069356.1 978777 D 273123 CDS YP_069357.1 51595166 2953362 980123..980953 1 NC_006155.1 similar to Yersinia pestis YPO3314 N-terminal region of transketolase (100% evalue=1.E-159); Listeria monocytogenes lmo1032 transketolase (45.1% evalue=2.E-61); hypothetical protein 980953 2953362 YPTB0816 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069357.1 980123 D 273123 CDS YP_069358.1 51595167 2953363 980946..981890 1 NC_006155.1 similar to Yersinia pestis YPO3313 C-terminal region of transketolase (100% evalue=1.E-177); Listeria monocytogenes lmo1033 similar to transketolase (40.5% evalue=3.E-56); C-terminal region of transketolase 981890 2953363 YPTB0817 Yersinia pseudotuberculosis IP 32953 C-terminal region of transketolase YP_069358.1 980946 D 273123 CDS YP_069359.1 51595168 2953364 981893..983380 1 NC_006155.1 similar to Yersinia pestis YPO3312 glycerol kinase (99.7% evalue=0); Agrobacterium tumefaciens Atu1903 glpK; glycerol kinase (44.3% evalue=1.E-108); glycerol kinase 2 983380 2953364 YPTB0818 Yersinia pseudotuberculosis IP 32953 glycerol kinase 2 YP_069359.1 981893 D 273123 CDS YP_069360.1 51595169 2953365 983401..984825 1 NC_006155.1 similar to Yersinia pestis YPO3311 conserved hypothetical protein (99.3% evalue=0); Thermotoga maritima TM0951 hypothetical protein (51.5% evalue=1.E-134); hypothetical protein 984825 2953365 YPTB0819 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069360.1 983401 D 273123 CDS YP_069361.1 51595170 2953366 complement(985047..985991) 1 NC_006155.1 similar to Yersinia pestis YPO3310 transcriptional regulatory protein (100% evalue=1.E-173); Agrobacterium tumefaciens AGR_C_3494 transcriptional regulator (40.5% evalue=2.E-63); transcriptional regulator 985991 2953366 YPTB0820 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069361.1 985047 R 273123 CDS YP_069362.1 51595171 2953367 complement(986239..987579) 1 NC_006155.1 similar to Yersinia pestis YPO3309 membrane protein (99.5% evalue=0); Pseudomonas aeruginosa PA3355 hypothetical protein (56% evalue=1.E-132); MFS transporter 987579 2953367 YPTB0821 Yersinia pseudotuberculosis IP 32953 MFS transporter YP_069362.1 986239 R 273123 CDS YP_069363.1 51595172 2957040 987896..988384 1 NC_006155.1 similar to Yersinia pestis YPO3308 competence-damaged protein (100% evalue=3.E-88); Escherichia coli JW2670 ygaD; Hypothetical protein (66.6% evalue=3.E-55); competence damage-inducible protein A 988384 ygaD 2957040 ygaD Yersinia pseudotuberculosis IP 32953 competence damage-inducible protein A YP_069363.1 987896 D 273123 CDS YP_069364.1 51595173 2956412 988499..989569 1 NC_006155.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 989569 recA 2956412 recA Yersinia pseudotuberculosis IP 32953 recombinase A YP_069364.1 988499 D 273123 CDS YP_069365.1 51595174 2956422 989955..990503 1 NC_006155.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 990503 recX 2956422 recX Yersinia pseudotuberculosis IP 32953 recombination regulator RecX YP_069365.1 989955 D 273123 CDS YP_069366.1 51595175 2955183 990643..993270 1 NC_006155.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 993270 alaS 2955183 alaS Yersinia pseudotuberculosis IP 32953 alanyl-tRNA synthetase YP_069366.1 990643 D 273123 CDS YP_069367.1 51595176 2955375 993520..993705 1 NC_006155.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 993705 csrA 2955375 csrA Yersinia pseudotuberculosis IP 32953 carbon storage regulator YP_069367.1 993520 D 273123 CDS YP_069368.1 51595177 2957111 995005..995571 1 NC_006155.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 995571 yqaB 2957111 yqaB Yersinia pseudotuberculosis IP 32953 fructose-1-phosphatase YP_069368.1 995005 D 273123 CDS YP_069369.1 51595178 2957110 995568..995996 1 NC_006155.1 similar to Yersinia pestis YPO3302 yqaA; membrane protein (99.2% evalue=7.E-76); Salmonella typhimurium STM2819 yqaA; inner membrane protein (58.1% evalue=7.E-46); hypothetical protein 995996 yqaA 2957110 yqaA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069369.1 995568 D 273123 CDS YP_069370.1 51595179 2955750 996079..997638 1 NC_006155.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 997638 gshA 2955750 gshA Yersinia pseudotuberculosis IP 32953 glutamate--cysteine ligase YP_069370.1 996079 D 273123 CDS YP_069371.1 51595180 2955974 997806..998321 1 NC_006155.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 998321 luxS 2955974 luxS Yersinia pseudotuberculosis IP 32953 S-ribosylhomocysteinase YP_069371.1 997806 D 273123 CDS YP_069372.2 161760584 2957038 complement(998410..999600) 1 NC_006155.1 similar to Yersinia pestis YPO3298 yfjD; membrane protein (99.2% evalue=0); Escherichia coli JW2593 yfjD; Hypothetical protein (77.3% evalue=0); hypothetical protein 999600 yfjD 2957038 yfjD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069372.2 998410 R 273123 CDS YP_069373.1 51595182 2957104 complement(999762..1000655) 1 NC_006155.1 similar to Yersinia pestis YPO3297 corE; membrane protein (99.6% evalue=1.E-166); Escherichia coli ECs3474 hypothetical protein (74.8% evalue=1.E-114); hypothetical protein 1000655 ypjD 2957104 ypjD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069373.1 999762 R 273123 CDS YP_069374.1 51595183 2955545 1000719..1002080 1 NC_006155.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1002080 ffh 2955545 ffh Yersinia pseudotuberculosis IP 32953 signal recognition particle protein YP_069374.1 1000719 D 273123 CDS YP_069375.1 51595184 2956543 1002308..1002556 1 NC_006155.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1002556 rpsP 2956543 rpsP Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S16 YP_069375.1 1002308 D 273123 CDS YP_069376.1 51595185 2956458 1002578..1003126 1 NC_006155.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1003126 rimM 2956458 rimM Yersinia pseudotuberculosis IP 32953 16S rRNA-processing protein RimM YP_069376.1 1002578 D 273123 CDS YP_069377.1 51595186 2956736 1003165..1003905 1 NC_006155.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1003905 trmD 2956736 trmD Yersinia pseudotuberculosis IP 32953 tRNA (guanine-N(1)-)-methyltransferase YP_069377.1 1003165 D 273123 CDS YP_069378.1 51595187 2956503 1003986..1004333 1 NC_006155.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1004333 rplS 2956503 rplS Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L19 YP_069378.1 1003986 D 273123 CDS YP_069379.1 51595188 2956995 complement(1004596..1005363) 1 NC_006155.1 similar to Yersinia pestis YPO3290 ydiY; exported protein (100% evalue=1.E-145); Escherichia coli ECs2428 hypothetical protein (54% evalue=6.E-77); hypothetical protein 1005363 ydiY 2956995 ydiY Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069379.1 1004596 R 273123 CDS YP_069380.1 51595189 2955436 complement(1005686..1007029) 1 NC_006155.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 1007029 dcuB 2955436 dcuB Yersinia pseudotuberculosis IP 32953 anaerobic C4-dicarboxylate transporter YP_069380.1 1005686 R 273123 CDS YP_069381.1 51595190 2953368 complement(1007462..1008178) 1 NC_006155.1 unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 1008178 2953368 YPTB0840 Yersinia pseudotuberculosis IP 32953 two-component response-regulatory protein YehT YP_069381.1 1007462 R 273123 CDS YP_069382.1 51595191 2955225 1008411..1009481 1 NC_006155.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1009481 aroF 2955225 aroF Yersinia pseudotuberculosis IP 32953 phospho-2-dehydro-3-deoxyheptonate aldolase YP_069382.1 1008411 D 273123 CDS YP_069383.1 51595192 2956845 1009494..1010615 1 NC_006155.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1010615 tyrA 2956845 tyrA Yersinia pseudotuberculosis IP 32953 bifunctional chorismate mutase/prephenate dehydrogenase YP_069383.1 1009494 D 273123 CDS YP_069384.1 51595193 2956248 complement(1010720..1011877) 1 NC_006155.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 1011877 pheA 2956248 pheA Yersinia pseudotuberculosis IP 32953 bifunctional chorismate mutase/prephenate dehydratase YP_069384.1 1010720 R 273123 CDS YP_069385.1 51595194 2957031 complement(1012239..1012601) 1 NC_006155.1 similar to Yersinia pestis YPO3279 yfiA; sigma 54 modulation protein (100% evalue=9.E-63); Escherichia coli Z3890 yfiA; yhbH sigma 54 modulator (79.6% evalue=6.E-46); sigma 54 modulation protein 1012601 yfiA 2957031 yfiA Yersinia pseudotuberculosis IP 32953 sigma 54 modulation protein YP_069385.1 1012239 R 273123 CDS YP_069386.1 51595195 2957035 complement(1012956..1013687) 1 NC_006155.1 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO 1013687 yfiO 2957035 yfiO Yersinia pseudotuberculosis IP 32953 outer membrane protein assembly complex subunit YfiO YP_069386.1 1012956 R 273123 CDS YP_069387.1 51595196 2956464 1013823..1014800 1 NC_006155.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 1014800 rluD 2956464 rluD Yersinia pseudotuberculosis IP 32953 23S rRNA pseudouridine synthase D YP_069387.1 1013823 D 273123 CDS YP_069388.1 51595197 2957033 1014802..1015533 1 NC_006155.1 similar to Yersinia pestis YPO3276 conserved hypothetical protein (99.5% evalue=1.E-138); Escherichia coli ECs3456 hypothetical protein (62.1% evalue=2.E-85); hypothetical protein 1015533 yfiH 2957033 yfiH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069388.1 1014802 D 273123 CDS YP_069389.1 51595198 2955334 1015663..1018236 1 NC_006155.1 similar to Yersinia pestis YPO3275 clpB, htpM; Clp ATPase (99.8% evalue=0); Escherichia coli JW2573 clpB; ClpB protein (heat shock protein f84.1) (86.6% evalue=0); protein disaggregation chaperone 1018236 clpB 2955334 clpB Yersinia pseudotuberculosis IP 32953 protein disaggregation chaperone YP_069389.1 1015663 D 273123 CDS YP_069390.1 51595199 2957034 complement(1024406..1024747) 1 NC_006155.1 similar to Yersinia pestis YPO3274 lipoprotein (100% evalue=2.E-63); Salmonella typhimurium STM2653 yfiM; outer membrane lipoprotein (55.7% evalue=7.E-31); hypothetical protein 1024747 yfiM 2957034 yfiM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069390.1 1024406 R 273123 CDS YP_069391.1 51595200 2956346 complement(1024809..1026167) 1 NC_006155.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 1026167 pssA 2956346 pssA Yersinia pseudotuberculosis IP 32953 phosphatidylserine synthase YP_069391.1 1024809 R 273123 CDS YP_069392.1 51595201 2957037 complement(1026340..1028982) 1 NC_006155.1 similar to Yersinia pestis YPO3272 yfiQ; acetyltransferase (99.6% evalue=0); Escherichia coli Z3869 yfiQ; orf, hypothetical protein (75.6% evalue=0); acyl-CoA synthetase 1028982 yfiQ 2957037 yfiQ Yersinia pseudotuberculosis IP 32953 acyl-CoA synthetase YP_069392.1 1026340 R 273123 CDS YP_069393.1 51595202 2957036 complement(1029025..1029774) 1 NC_006155.1 similar to Yersinia pestis YPO3271 conserved hypothetical protein (98.7% evalue=1.E-143); Escherichia coli b2583 yfiP; hypothetical 27.0 kD protein in ung-pssA intergenic region (60.8% evalue=3.E-75); hypothetical protein 1029774 yfiP 2957036 yfiP Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069393.1 1029025 R 273123 CDS YP_069394.1 51595203 2956838 complement(1029945..1030382) 1 NC_006155.1 similar to Yersinia pestis YPO3270 trxC; thioredoxin 2 (97.9% evalue=3.E-81); Escherichia coli Z3867 trxC; thioredoxin-like protein (76.9% evalue=4.E-63); thioredoxin 1030382 trxC 2956838 trxC Yersinia pseudotuberculosis IP 32953 thioredoxin YP_069394.1 1029945 R 273123 CDS YP_069395.1 51595204 2957032 1030634..1031806 1 NC_006155.1 similar to Yersinia pestis YPO3269 yfiF; tRNA/rRNA methyltransferase (99.2% evalue=0); Salmonella typhimurium STM2648 yfiF; tRNA/rRNA methyltransferase (60% evalue=1.E-123); methyltransferase 1031806 yfiF 2957032 yfiF Yersinia pseudotuberculosis IP 32953 methyltransferase YP_069395.1 1030634 D 273123 CDS YP_069396.1 51595205 2955503 complement(1031939..1033474) 1 NC_006155.1 similar to Yersinia pestis YPO3268 emrB; multidrug resistance protein B (99.8% evalue=0); Escherichia coli JW2661 emrB; Multidrug resistant protein EmrB (84% evalue=0); MFS multidrug efflux pump, emrB subunit 1033474 emrB 2955503 emrB Yersinia pseudotuberculosis IP 32953 MFS multidrug efflux pump, emrB subunit YP_069396.1 1031939 R 273123 CDS YP_069397.1 51595206 2955502 complement(1033513..1034685) 1 NC_006155.1 similar to Yersinia pestis YPO3267 emrA; multidrug resistance protein A (100% evalue=0); Salmonella typhi STY2940 emrA; multidrug resistance protein A (71.4% evalue=1.E-157); multidrug efflux pump membrane fusion subunit EmrA 1034685 emrA 2955502 emrA Yersinia pseudotuberculosis IP 32953 multidrug efflux pump membrane fusion subunit EmrA YP_069397.1 1033513 R 273123 CDS YP_069398.1 51595207 2955504 complement(1035069..1035581) 1 NC_006155.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 1035581 emrR 2955504 emrR Yersinia pseudotuberculosis IP 32953 transcriptional repressor MprA YP_069398.1 1035069 R 273123 CDS YP_069399.1 51595208 2957041 complement(1035753..1036094) 1 NC_006155.1 similar to Yersinia pestis YPO3265 membrane protein (99.1% evalue=2.E-59); Escherichia coli JW2658 ygaH; Hypothetical protein (55.2% evalue=3.E-28); hypothetical protein 1036094 ygaH 2957041 ygaH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069399.1 1035753 R 273123 CDS YP_069400.1 51595209 2957043 complement(1036091..1036864) 1 NC_006155.1 similar to Yersinia pestis YPO3264 amino acid transporter (99.2% evalue=1.E-141); Escherichia coli Z3983 hypothetical protein (71.3% evalue=1.E-92); LIV-E family branched chain amino acid exporter large subunit 1036864 ygaZ 2957043 ygaZ Yersinia pseudotuberculosis IP 32953 LIV-E family branched chain amino acid exporter large subunit YP_069400.1 1036091 R 273123 CDS YP_069401.1 51595210 2953369 complement(1037024..1038223) 1 NC_006155.1 similar to Yersinia pestis YPO3263 probable sugar transporter (99.7% evalue=0); Salmonella typhi STY2938 transmembrane transport protein (75.3% evalue=1.E-162); MFS sugar/multidrug efflux antiporter 1038223 2953369 YPTB0860 Yersinia pseudotuberculosis IP 32953 MFS sugar/multidrug efflux antiporter YP_069401.1 1037024 R 273123 CDS YP_069402.1 51595211 2953370 complement(1038447..1038914) 1 NC_006155.1 similar to Yersinia pestis YPO3262 hypothetical protein (98.7% evalue=1.E-84); Caulobacter crescentus CC2614 hypothetical protein (47.9% evalue=8.E-26); hypothetical protein 1038914 2953370 YPTB0861 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069402.1 1038447 R 273123 CDS YP_069403.1 51595212 2953371 complement(1038943..1040340) 1 NC_006155.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1040340 2953371 YPTB0862 Yersinia pseudotuberculosis IP 32953 amidase YP_069403.1 1038943 R 273123 CDS YP_069404.1 51595213 2953372 complement(1040337..1040540) 1 NC_006155.1 similar to Yersinia pestis YPO3260 hypothetical protein (100% evalue=5.E-31); hypothetical protein 1040540 2953372 YPTB0863 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069404.1 1040337 R 273123 CDS YP_069405.1 51595214 2953373 1040838..1041683 1 NC_006155.1 similar to Yersinia pestis YPO3259 rpiR-family transcriptional regulatory protein (100% evalue=1.E-153); Sinorhizobium meliloti SMc04363 hypothetical protein (32.7% evalue=1.E-30); rpiR family transcriptional regulatory protein 1041683 2953373 YPTB0864 Yersinia pseudotuberculosis IP 32953 rpiR family transcriptional regulatory protein YP_069405.1 1040838 D 273123 CDS YP_069406.1 51595215 2953374 1041685..1041900 1 NC_006155.1 similar to Yersinia pestis YPO3258 membrane protein. 94% identical.; hypothetical protein 1041900 2953374 YPTB0865 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069406.1 1041685 D 273123 CDS YP_069407.1 51595216 2953375 1042011..1042799 1 NC_006155.1 similar to Yersinia pestis YPO3257 amino acid ABC transporter, periplasmic protein (99.6% evalue=1.E-145); Agrobacterium tumefaciens AGR_C_2566 antigenic protein (61.1% evalue=5.E-82); amino acid ABC transporter substrate-binding protein 1042799 2953375 YPTB0866 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter substrate-binding protein YP_069407.1 1042011 D 273123 CDS YP_069408.1 51595217 2953376 1042812..1043480 1 NC_006155.1 similar to Yersinia pestis YPO3256 amino acid ABC transporter, permease (100% evalue=1.E-119); Agrobacterium tumefaciens AGR_C_2567 amino acid ABC transporter, permease (55.2% evalue=2.E-59); amino acid ABC transporter permease 1043480 2953376 YPTB0867 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter permease YP_069408.1 1042812 D 273123 CDS YP_069409.1 51595218 2953377 1043477..1044130 1 NC_006155.1 similar to Yersinia pestis YPO3255 amino acid ABC transporter, permease (99.5% evalue=1.E-122); Agrobacterium tumefaciens Atu1390 ABC transporter, membrane spanning protein (60.9% evalue=1.E-67); amino acid ABC transporter permease 1044130 2953377 YPTB0868 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter permease YP_069409.1 1043477 D 273123 CDS YP_069410.1 51595219 2953378 1044111..1044857 1 NC_006155.1 similar to Yersinia pestis YPO3254 amino acid ABC transporter, ATP-binding protein (100% evalue=1.E-137); Ralstonia solanacearum RS01498 probable amino-acid ATP-binding ABC transporter protein (63.2% evalue=1.E-79); amino acid ABC transporter ATP-binding protein 1044857 2953378 YPTB0869 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter ATP-binding protein YP_069410.1 1044111 D 273123 CDS YP_069411.1 51595220 2953379 1044889..1046214 1 NC_006155.1 similar to Caulobacter crescentus CC2604 aminotransferase, class V (60.6% evalue=1.E-136); B. halodurans BH0762 transaminase (52.6% evalue=1.E-116); class V aminotransferase 1046214 2953379 YPTB0870 Yersinia pseudotuberculosis IP 32953 class V aminotransferase YP_069411.1 1044889 D 273123 CDS YP_069412.1 51595221 2953380 1046214..1047497 1 NC_006155.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1047497 2953380 YPTB0871 Yersinia pseudotuberculosis IP 32953 allantoate amidohydrolase YP_069412.1 1046214 D 273123 CDS YP_069413.1 51595222 2956936 complement(1047598..1048368) 1 NC_006155.1 similar to Salmonella typhi STY0353 possible hydrolase (67.4% evalue=1.E-100); Salmonella typhimurium STM0308 yafV; amidohydrolase (67.8% evalue=1.E-101); hypothetical protein 1048368 yafV 2956936 yafV Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069413.1 1047598 R 273123 CDS YP_069414.1 51595223 2956963 complement(1048356..1049516) 1 NC_006155.1 catalyzes the transfer of an amino moiety; aminotransferase 1049516 ybdL 2956963 ybdL Yersinia pseudotuberculosis IP 32953 aminotransferase YP_069414.1 1048356 R 273123 CDS YP_069415.1 51595224 2953381 1049656..1050324 1 NC_006155.1 catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1050324 2953381 YPTB0874 Yersinia pseudotuberculosis IP 32953 methylthioribulose-1-phosphate dehydratase YP_069415.1 1049656 D 273123 CDS YP_069416.1 51595225 2953382 1050321..1051010 1 NC_006155.1 similar to Xylella fastidiosa XF2211 enolase-phosphatase (48.5% evalue=2.E-50); Pseudomonas aeruginosa PA1685 masA; enolase-phosphatase E-1 (50.6% evalue=3.E-55); enolase 1051010 2953382 YPTB0875 Yersinia pseudotuberculosis IP 32953 enolase YP_069416.1 1050321 D 273123 CDS YP_069417.1 51595226 2953383 1051109..1051651 1 NC_006155.1 similar to Xylella fastidiosa XF2210 dioxygenase (52.2% evalue=5.E-51); Pseudomonas aeruginosa PA1684 probable oxidase (55.8% evalue=3.E-56); methionine salvage pathway enzyme E-2/E-2' 1051651 2953383 YPTB0876 Yersinia pseudotuberculosis IP 32953 methionine salvage pathway enzyme E-2/E-2' YP_069417.1 1051109 D 273123 CDS YP_069418.1 51595227 2955499 complement(1051684..1052724) 1 NC_006155.1 similar to Thermotoga maritima TM0911 translation initiation factor, eIF-2B alpha subunit-related (44.7% evalue=2.E-65); A. aeolicus aq_2114 eif; initiation factor eIF-2B alpha subunit (45.9% evalue=4.E-66); translation initiation factor EIF-2B subunit alpha 1052724 eif 2955499 eif Yersinia pseudotuberculosis IP 32953 translation initiation factor EIF-2B subunit alpha YP_069418.1 1051684 R 273123 CDS YP_069419.1 51595228 2953384 1052920..1054143 1 NC_006155.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1054143 mtnK 2953384 mtnK Yersinia pseudotuberculosis IP 32953 methylthioribose kinase YP_069419.1 1052920 D 273123 CDS YP_069420.1 51595229 2956551 1055346..1057136 1 NC_006155.1 similar to Yersinia pestis YPO3248 hxuB; surface-exposed protein (99.6% evalue=0); H. influenzae HI0263 hxuB; heme-hemopexin utilization protein B precursor (30.4% evalue=1.E-65); TPS secretion family afimbrial adhesion 1057136 rscB 2956551 rscB Yersinia pseudotuberculosis IP 32953 TPS secretion family afimbrial adhesion YP_069420.1 1055346 D 273123 CDS YP_069421.1 51595230 2956550 1057177..1063347 1 NC_006155.1 similar to Yersinia pestis YPO3247 hmwA; adhesin (95.6% evalue=0); adhesin 1063347 rscA 2956550 rscA Yersinia pseudotuberculosis IP 32953 adhesin YP_069421.1 1057177 D 273123 CDS YP_069422.1 51595231 2956408 1063502..1065355 1 NC_006155.1 similar to Yersinia pestis YPO3246 hmwC; accessory processing protein (99.3% evalue=0); accessory processing protein 1065355 rcsC 2956408 rcsC Yersinia pseudotuberculosis IP 32953 accessory processing protein YP_069422.1 1063502 D 273123 CDS YP_069423.1 51595232 2953385 1065357..1066103 1 NC_006155.1 similar to Yersinia pestis YPO3245 hypothetical protein (100% evalue=1.E-141); hypothetical protein 1066103 2953385 YPTB0882 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069423.1 1065357 D 273123 CDS YP_069424.1 51595233 2955524 complement(1066275..1068722) 1 NC_006155.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1068722 fadE 2955524 fadE Yersinia pseudotuberculosis IP 32953 acyl-CoA dehydrogenase YP_069424.1 1066275 R 273123 CDS YP_069425.1 51595234 2955962 1068962..1069543 1 NC_006155.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1069543 gmhA 2955962 gmhA Yersinia pseudotuberculosis IP 32953 phosphoheptose isomerase YP_069425.1 1068962 D 273123 CDS YP_069426.1 51595235 2956934 1069746..1070519 1 NC_006155.1 similar to Yersinia pestis YPO3242 conserved hypothetical protein (100% evalue=1.E-155); Escherichia coli b0223 yafJ; amidotransferase (86.2% evalue=1.E-134); hypothetical protein 1070519 yafJ 2956934 yafJ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069426.1 1069746 D 273123 CDS YP_069427.1 51595236 2956935 complement(1070484..1071224) 1 NC_006155.1 similar to Yersinia pestis YPO3241 yafK; exported protein (99.1% evalue=1.E-141); Salmonella typhi STY0357 yafK; exported protein (60.7% evalue=7.E-82); hypothetical protein 1071224 yafK 2956935 yafK Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069427.1 1070484 R 273123 CDS YP_069428.1 51595237 2956148 1071720..1073063 1 NC_006155.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1073063 nqrA 2956148 nqrA Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit A YP_069428.1 1071720 D 273123 CDS YP_069429.1 51595238 2956149 1073067..1074308 1 NC_006155.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1074308 nqrB 2956149 nqrB Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit B YP_069429.1 1073067 D 273123 CDS YP_069430.1 51595239 2956150 1074298..1075098 1 NC_006155.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1075098 nqrC 2956150 nqrC Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit C YP_069430.1 1074298 D 273123 CDS YP_069431.1 51595240 2956151 1075091..1075720 1 NC_006155.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1075720 nqrD 2956151 nqrD Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit D YP_069431.1 1075091 D 273123 CDS YP_069432.1 51595241 2956152 1075727..1076323 1 NC_006155.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1076323 nqrE 2956152 nqrE Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit E YP_069432.1 1075727 D 273123 CDS YP_069433.1 51595242 2956153 1076339..1077562 1 NC_006155.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1077562 nqrF 2956153 nqrF Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit F YP_069433.1 1076339 D 273123 CDS YP_069434.1 51595243 2955200 1077603..1078625 1 NC_006155.1 similar to Yersinia pestis YPO3234 apbE; thiamine biosynthesis lipoprotein (99.7% evalue=0); Vibrio cholerae VC2289 thiamin biosynthesis lipoprotein ApbE (64.2% evalue=1.E-118); thiamine biosynthesis lipoprotein 1078625 apbE 2955200 apbE Yersinia pseudotuberculosis IP 32953 thiamine biosynthesis lipoprotein YP_069434.1 1077603 D 273123 CDS YP_069435.1 51595244 2953386 1078638..1078865 1 NC_006155.1 similar to Yersinia pestis YPO3233 exported protein (100% evalue=3.E-37); Vibrio cholerae VC2288 conserved hypothetical protein (58.8% evalue=1.E-19); hypothetical protein 1078865 2953386 YPTB0894 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069435.1 1078638 D 273123 CDS YP_069436.1 51595245 2953387 complement(1079110..1080057) 1 NC_006155.1 similar to Yersinia pestis YPO3232 exported protein (99% evalue=1.E-177); hypothetical protein 1080057 2953387 YPTB0895 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069436.1 1079110 R 273123 CDS YP_069437.1 51595246 2955460 1080413..1081471 1 NC_006155.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1081471 dinP 2955460 dinP Yersinia pseudotuberculosis IP 32953 DNA polymerase IV YP_069437.1 1080413 D 273123 CDS YP_069438.2 284987825 2956232 complement(1081585..1083045) 1 NC_006155.1 similar to Yersinia pestis YPO3230 pepD, pepH; aminoacyl-histidine dipeptidase (99.5% evalue=0); Escherichia coli JW0227 pepD; X-his dipeptidase precursor (78.3% evalue=0); aminoacyl-histidine dipeptidase 1083045 pepD 2956232 pepD Yersinia pseudotuberculosis IP 32953 aminoacyl-histidine dipeptidase YP_069438.2 1081585 R 273123 CDS YP_069439.1 51595248 2953388 1084920..1085831 1 NC_006155.1 similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (38.2% evalue=1.E-12); LysR family transcriptional regulator 1085831 2953388 YPTB0898 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_069439.1 1084920 D 273123 CDS YP_069440.1 51595249 2953389 complement(1086291..1087895) 1 NC_006155.1 similar to Yersinia pestis YPO3227 carbohydrate-binding protein (100% evalue=0); Vibrio cholerae VCA0140 spindolin-related protein (34.5% evalue=6.E-50); carbohydrate-binding protein 1087895 2953389 YPTB0899 Yersinia pseudotuberculosis IP 32953 carbohydrate-binding protein YP_069440.1 1086291 R 273123 CDS YP_069441.1 51595250 2953390 complement(1088092..1088397) 1 NC_006155.1 similar to Yersinia pestis YPO3226 membrane protein.; holin protein 1088397 2953390 YPTB0900 Yersinia pseudotuberculosis IP 32953 holin protein YP_069441.1 1088092 R 273123 CDS YP_069442.1 51595251 2955742 1088824..1089282 1 NC_006155.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1089282 gpt 2955742 gpt Yersinia pseudotuberculosis IP 32953 xanthine-guanine phosphoribosyltransferase YP_069442.1 1088824 D 273123 CDS YP_069443.1 51595252 2956932 1089409..1090656 1 NC_006155.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1090656 frsA 2956932 frsA Yersinia pseudotuberculosis IP 32953 fermentation/respiration switch protein YP_069443.1 1089409 D 273123 CDS YP_069444.1 51595253 2955361 1090716..1091117 1 NC_006155.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 1091117 crl 2955361 crl Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator Crl YP_069444.1 1090716 D 273123 CDS YP_069445.1 51595254 2956323 1091294..1092397 1 NC_006155.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1092397 proB 2956323 proB Yersinia pseudotuberculosis IP 32953 gamma-glutamyl kinase YP_069445.1 1091294 D 273123 CDS YP_069446.1 51595255 2956322 1092407..1093666 1 NC_006155.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1093666 proA 2956322 proA Yersinia pseudotuberculosis IP 32953 gamma-glutamyl phosphate reductase YP_069446.1 1092407 D 273123 CDS YP_069447.1 51595256 2953391 1093994..1094752 1 NC_006155.1 similar to Yersinia pestis YPO3220 conserved hypothetical protein (99.2% evalue=1.E-140); Salmonella typhimurium STM1798 ycgR; inner membrane protein (44.2% evalue=2.E-49); hypothetical protein 1094752 2953391 YPTB0906 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069447.1 1093994 D 273123 CDS YP_069448.1 51595257 2953392 1094935..1095204 1 NC_006155.1 similar to Yersinia pestis YPO3219 membrane protein (100% evalue=6.E-42); hypothetical protein 1095204 2953392 YPTB0907 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069448.1 1094935 D 273123 CDS YP_069449.1 51595258 2956933 1095450..1095971 1 NC_006155.1 similar to Yersinia pestis YPO3218 conserved hypothetical protein (98.2% evalue=6.E-94); Escherichia coli ECs0206 biotin synthesis protein (64% evalue=2.E-64); methyltransferase in menaquinone/biotin biosynthesis 1095971 yafE 2956933 yafE Yersinia pseudotuberculosis IP 32953 methyltransferase in menaquinone/biotin biosynthesis YP_069449.1 1095450 D 273123 CDS YP_069450.1 51595259 2953393 complement(1096218..1096433) 1 NC_006155.1 similar to Yersinia pestis YPO3217 hypothetical protein. 88% identical.; hypothetical protein 1096433 2953393 YPTB0909 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069450.1 1096218 R 273123 CDS YP_069451.1 51595260 2953394 1096701..1097258 1 NC_006155.1 similar to Yersinia pestis YPO3216 methyltransferase (99.4% evalue=1.E-102); B. halodurans BH2056 unknown conserved protein in others (28.8% evalue=3.E-15); methyltransferase 1097258 2953394 YPTB0910 Yersinia pseudotuberculosis IP 32953 methyltransferase YP_069451.1 1096701 D 273123 CDS YP_069452.1 51595261 2955229 1097505..1098029 1 NC_006155.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1098029 aroL 2955229 aroL Yersinia pseudotuberculosis IP 32953 shikimate kinase YP_069452.1 1097505 D 273123 CDS YP_069453.1 51595262 2956939 1098526..1098813 1 NC_006155.1 similar to Yersinia pestis YPO3213 conserved hypothetical protein (100% evalue=6.E-50); Salmonella typhi STY0424 yaiE; conserved hypothetical protein (65.9% evalue=1.E-31); hypothetical protein 1098813 yaiE 2956939 yaiE Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069453.1 1098526 D 273123 CDS YP_069454.1 51595263 2956411 complement(1099035..1099946) 1 NC_006155.1 Required for efficient pilin antigenic variation; recombination associated protein 1099946 rdgC 2956411 rdgC Yersinia pseudotuberculosis IP 32953 recombination associated protein YP_069454.1 1099035 R 273123 CDS YP_069455.1 51595264 2956942 1100279..1101193 1 NC_006155.1 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 1101193 yajF 2956942 yajF Yersinia pseudotuberculosis IP 32953 fructokinase YP_069455.1 1100279 D 273123 CDS YP_069456.1 51595265 2956572 complement(1101662..1105351) 1 NC_006155.1 similar to Salmonella typhimurium STM0395 sbcC; ATP-dependent dsDNA exonuclease (43.9% evalue=0); Pseudomonas aeruginosa PA4282 probable exonuclease (33.3% evalue=1.E-140); ATP-dependent dsDNA exonuclease 1105351 sbcC 2956572 sbcC Yersinia pseudotuberculosis IP 32953 ATP-dependent dsDNA exonuclease YP_069456.1 1101662 R 273123 CDS YP_069457.1 51595266 2956573 complement(1105348..1106592) 1 NC_006155.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease SbcD 1106592 sbcD 2956573 sbcD Yersinia pseudotuberculosis IP 32953 exonuclease SbcD YP_069457.1 1105348 R 273123 CDS YP_069458.1 51595267 2956266 1106860..1107549 1 NC_006155.1 similar to Yersinia pestis YPO3205 phoB; phosphate regulon transcriptional regulatory protein (100% evalue=1.E-129); Salmonella typhi STY0432 phoB; phosphate regulon transcriptional regulatory protein PhoB (90.3% evalue=1.E-119); two-component regulatory system response regulator 1107549 phoB 2956266 phoB Yersinia pseudotuberculosis IP 32953 two-component regulatory system response regulator YP_069458.1 1106860 D 273123 CDS YP_069459.1 51595268 2956270 1107574..1108890 1 NC_006155.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 1108890 phoR 2956270 phoR Yersinia pseudotuberculosis IP 32953 phosphate regulon sensor protein YP_069459.1 1107574 D 273123 CDS YP_069460.1 51595269 2956354 1108912..1109976 1 NC_006155.1 similar to Yersinia pestis YPO3203 pstS; phosphate binding protein (99.7% evalue=0); Pseudomonas aeruginosa PA5369 phosphate transport system substrate-binding protein (58.1% evalue=2.E-97); phosphate ABC transporter substrate-binding protein 1109976 pstS 2956354 pstS Yersinia pseudotuberculosis IP 32953 phosphate ABC transporter substrate-binding protein YP_069460.1 1108912 D 273123 CDS YP_069461.1 51595270 2955296 1110450..1111769 1 NC_006155.1 similar to Yersinia pestis YPO3202 brnQ; branched-chain amino acid transport system II carrier protein (100% evalue=0); Salmonella typhimurium STM0399 brnQ; LIVCS family, branched chain amino acid transporter system II (LIV-II) (75.9% evalue=0); LIVCS family branched chain amino acid transporter system II (LIV-II) 1111769 brnQ 2955296 brnQ Yersinia pseudotuberculosis IP 32953 LIVCS family branched chain amino acid transporter system II (LIV-II) YP_069461.1 1110450 D 273123 CDS YP_069462.1 51595271 2956330 1111845..1113236 1 NC_006155.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; permease 1113236 proY 2956330 proY Yersinia pseudotuberculosis IP 32953 permease YP_069462.1 1111845 D 273123 CDS YP_069463.1 51595272 2955992 1113831..1115660 1 NC_006155.1 similar to Yersinia pestis YPO3200 malZ; maltodextrin glucosidase (99.8% evalue=0); Salmonella typhimurium STM0401 malZ; maltodextrin glucosidase (58.8% evalue=0); maltodextrin glucosidase 1115660 malZ 2955992 malZ Yersinia pseudotuberculosis IP 32953 maltodextrin glucosidase YP_069463.1 1113831 D 273123 CDS YP_069464.1 51595273 2953395 1115815..1116495 1 NC_006155.1 similar to Yersinia pestis YPO3199 probable short-chain dehydrogenase (100% evalue=1.E-126); Pseudomonas aeruginosa PA4079 probable dehydrogenase (38.9% evalue=2.E-39); short chain dehydrogenase 1116495 2953395 YPTB0923 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_069464.1 1115815 D 273123 CDS YP_069465.1 51595274 2955684 complement(1116703..1118466) 1 NC_006155.1 similar to Ralstonia solanacearum RS03690 ggt1, RSp0274; probable gamma-glutamyltranspeptidase signal peptide protein (57.4% evalue=0); Mesorhizobium loti mlr5711 gamma-glutamyltranspeptidase (56.5% evalue=1.E-174); gamma-glutamyltranspeptidase 1118466 ggt 2955684 ggt Yersinia pseudotuberculosis IP 32953 gamma-glutamyltranspeptidase YP_069465.1 1116703 R 273123 CDS YP_069466.1 51595275 2955179 complement(1118856..1119458) 1 NC_006155.1 similar to Yersinia pestis YPO3194 ahpC; alkyl hydroperoxide reductase subunit c (100% evalue=1.E-114); Salmonella typhi STY0440 thiol - alkyl hydroperoxide reductase (86.5% evalue=1.E-100); alkyl hydroperoxide reductase 1119458 ahpC 2955179 ahpC Yersinia pseudotuberculosis IP 32953 alkyl hydroperoxide reductase YP_069466.1 1118856 R 273123 CDS YP_069467.1 51595276 2956940 complement(1119797..1120378) 1 NC_006155.1 similar to Yersinia pestis YPO3193 conserved hypothetical protein (100% evalue=1.E-111); Salmonella typhi STY0441 yajB; conserved hypothetical protein (61.6% evalue=3.E-66); hypothetical protein 1120378 yajB 2956940 yajB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069467.1 1119797 R 273123 CDS YP_069468.1 51595277 2956396 1120581..1121651 1 NC_006155.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1121651 queA 2956396 queA Yersinia pseudotuberculosis IP 32953 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_069468.1 1120581 D 273123 CDS YP_069469.1 51595278 2956686 1121744..1122868 1 NC_006155.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1122868 tgt 2956686 tgt Yersinia pseudotuberculosis IP 32953 queuine tRNA-ribosyltransferase YP_069469.1 1121744 D 273123 CDS YP_069470.1 51595279 2956941 1122980..1123315 1 NC_006155.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1123315 yajC 2956941 yajC Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit YajC YP_069470.1 1122980 D 273123 CDS YP_069471.1 51595280 2956584 1123343..1125190 1 NC_006155.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1125190 secD 2956584 secD Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecD YP_069471.1 1123343 D 273123 CDS YP_069472.1 51595281 2956585 1125201..1126169 1 NC_006155.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1126169 secF 2956585 secF Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecF YP_069472.1 1125201 D 273123 CDS YP_069473.1 51595282 2953396 1126421..1127743 1 NC_006155.1 similar to Yersinia pestis YPO3186 hypothetical protein (100% evalue=1.E-110); hypothetical protein 1127743 2953396 YPTB0932 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069473.1 1126421 D 273123 CDS YP_069474.1 51595283 2956954 1127814..1128263 1 NC_006155.1 similar to Yersinia pestis YPO3184 conserved hypothetical protein (100% evalue=9.E-80); Escherichia coli b0413 ybaD; hypothetical 17.2 kD protein in tsx-ribg intergenic region (ORF1) (86.5% evalue=8.E-71); transcriptional regulator NrdR 1128263 nrdR 2956954 nrdR Yersinia pseudotuberculosis IP 32953 transcriptional regulator NrdR YP_069474.1 1127814 D 273123 CDS YP_069475.1 51595284 2956452 1128413..1129522 1 NC_006155.1 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 1129522 ribD 2956452 ribD Yersinia pseudotuberculosis IP 32953 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_069475.1 1128413 D 273123 CDS YP_069476.1 51595285 2956455 1129658..1130128 1 NC_006155.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1130128 ribH 2956455 ribH Yersinia pseudotuberculosis IP 32953 6,7-dimethyl-8-ribityllumazine synthase YP_069476.1 1129658 D 273123 CDS YP_069477.1 51595286 2956182 1130149..1130565 1 NC_006155.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1130565 nusB 2956182 nusB Yersinia pseudotuberculosis IP 32953 transcription antitermination protein NusB YP_069477.1 1130149 D 273123 CDS YP_069478.1 51595287 2956696 1130806..1131795 1 NC_006155.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1131795 thiL 2956696 thiL Yersinia pseudotuberculosis IP 32953 thiamine monophosphate kinase YP_069478.1 1130806 D 273123 CDS YP_069479.1 51595288 2956244 1131788..1132273 1 NC_006155.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 1132273 pgpA 2956244 pgpA Yersinia pseudotuberculosis IP 32953 phosphatidylglycerophosphatase A YP_069479.1 1131788 D 273123 CDS YP_069480.1 51595289 2955492 complement(1132414..1134273) 1 NC_006155.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1134273 dxs 2955492 dxs Yersinia pseudotuberculosis IP 32953 1-deoxy-D-xylulose-5-phosphate synthase YP_069480.1 1132414 R 273123 CDS YP_069481.1 51595290 2955898 complement(1134429..1135349) 1 NC_006155.1 similar to Yersinia pestis YPO3176 ispA; geranyltranstransferase (99.6% evalue=1.E-170); Salmonella typhi STY0462 ispA; geranyltranstransferase (73.1% evalue=1.E-122); geranyltranstransferase 1135349 ispA 2955898 ispA Yersinia pseudotuberculosis IP 32953 geranyltranstransferase YP_069481.1 1134429 R 273123 CDS YP_069482.1 51595291 2956910 complement(1135354..1135608) 1 NC_006155.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1135608 xseB 2956910 xseB Yersinia pseudotuberculosis IP 32953 exodeoxyribonuclease VII small subunit YP_069482.1 1135354 R 273123 CDS YP_069483.1 51595292 2953397 1135690..1135860 1 NC_006155.1 similar to Yersinia pestis YPO3174 hypothetical protein. 100% identical; hypothetical protein 1135860 2953397 YPTB0942 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069483.1 1135690 D 273123 CDS YP_069484.1 51595293 2956694 1135958..1137409 1 NC_006155.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1137409 thiI 2956694 thiI Yersinia pseudotuberculosis IP 32953 thiamine biosynthesis protein ThiI YP_069484.1 1135958 D 273123 CDS YP_069485.1 51595294 2956695 complement(1137477..1138067) 1 NC_006155.1 similar to Yersinia pestis YPO3172 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme (100% evalue=1.E-107); Escherichia coli b0424 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (73.9% evalue=5.E-78); DJ-1 family protein 1138067 thiJ 2956695 thiJ Yersinia pseudotuberculosis IP 32953 DJ-1 family protein YP_069485.1 1137477 R 273123 CDS YP_069486.1 51595295 2956210 complement(1138030..1138941) 1 NC_006155.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1138941 panE 2956210 panE Yersinia pseudotuberculosis IP 32953 2-dehydropantoate 2-reductase YP_069486.1 1138030 R 273123 CDS YP_069487.1 51595296 2956944 1139173..1139664 1 NC_006155.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1139664 yajQ 2956944 yajQ Yersinia pseudotuberculosis IP 32953 nucleotide-binding protein YP_069487.1 1139173 D 273123 CDS YP_069488.1 51595297 2956945 complement(1139788..1141158) 1 NC_006155.1 similar to Yersinia pestis YPO3169 yajR; transporter (100% evalue=0); Salmonella typhi STY0475 hpothetical major facilitator family transport protein (75.2% evalue=0); MFS multidrug efflux pump 1141158 yajR 2956945 yajR Yersinia pseudotuberculosis IP 32953 MFS multidrug efflux pump YP_069488.1 1139788 R 273123 CDS YP_069489.1 51595298 2955397 complement(1141636..1142526) 1 NC_006155.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1142526 cyoE 2955397 cyoE Yersinia pseudotuberculosis IP 32953 protoheme IX farnesyltransferase YP_069489.1 1141636 R 273123 CDS YP_069490.1 51595299 2955396 complement(1142537..1142869) 1 NC_006155.1 similar to Yersinia pestis YPO3167 cyoD; cytochrome O ubiquinol oxidase subunit CyoD (100% evalue=3.E-56); Escherichia coli b0429 cyoD; cytochrome o ubiquinol oxidase operon protein cyoD (65.1% evalue=1.E-35); cytochrome o ubiquinol oxidase subunit IV 1142869 cyoD 2955396 cyoD Yersinia pseudotuberculosis IP 32953 cytochrome o ubiquinol oxidase subunit IV YP_069490.1 1142537 R 273123 CDS YP_069491.1 51595300 2955395 complement(1142869..1143483) 1 NC_006155.1 similar to Yersinia pestis YPO3166 cyoC; cytochrome O ubiquinol oxidase subunit III (100% evalue=1.E-116); Salmonella typhimurium STM0441 cyoC; cytochrome o ubiquinol oxidase subunit III (76% evalue=2.E-89); cytochrome o ubiquinol oxidase subunit III 1143483 cyoC 2955395 cyoC Yersinia pseudotuberculosis IP 32953 cytochrome o ubiquinol oxidase subunit III YP_069491.1 1142869 R 273123 CDS YP_069492.1 51595301 2955394 complement(1143473..1145464) 1 NC_006155.1 similar to Yersinia pestis YPO3165 cyoB; cytochrome O ubiquinol oxidase subunit I (100% evalue=0); Salmonella typhimurium STM0442 cyoB; cytochrome o ubiquinol oxidase subunit I (84.1% evalue=0); cytochrome o ubiquinol oxidase subunit I 1145464 cyoB 2955394 cyoB Yersinia pseudotuberculosis IP 32953 cytochrome o ubiquinol oxidase subunit I YP_069492.1 1143473 R 273123 CDS YP_069493.1 51595302 2955393 complement(1145469..1146425) 1 NC_006155.1 similar to Yersinia pestis YPO3164 cyoA; cytochrome O ubiquinol oxidase subunit II (100% evalue=0); Escherichia coli b0432 cyoA; cytochrome o ubiquinol oxidase subunit II (66.8% evalue=1.E-118); cytochrome o ubiquinol oxidase subunit II 1146425 cyoA 2955393 cyoA Yersinia pseudotuberculosis IP 32953 cytochrome o ubiquinol oxidase subunit II YP_069493.1 1145469 R 273123 CDS YP_069494.1 51595303 2957023 complement(1146795..1147562) 1 NC_006155.1 similar to Yersinia pestis YPO3163 yfeN; exported protein (100% evalue=1.E-154); Salmonella typhimurium STM2423 yfeN; outer membrane protein (60.9% evalue=1.E-91); hypothetical protein 1147562 yfeN 2957023 yfeN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069494.1 1146795 R 273123 CDS YP_069495.1 51595304 2955191 complement(1147854..1149332) 1 NC_006155.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 1149332 ampG 2955191 ampG Yersinia pseudotuberculosis IP 32953 muropeptide transporter YP_069495.1 1147854 R 273123 CDS YP_069496.1 51595305 2956943 complement(1149449..1150027) 1 NC_006155.1 similar to Yersinia pestis YPO3161 yajG; lipoprotein (100% evalue=1.E-102); Salmonella typhi STY0487 yajG; lipoprotein (73.4% evalue=3.E-77); hypothetical protein 1150027 yajG 2956943 yajG Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069496.1 1149449 R 273123 CDS YP_069497.1 51595306 2955295 1150376..1150696 1 NC_006155.1 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA 1150696 bolA 2955295 bolA Yersinia pseudotuberculosis IP 32953 transcriptional regulator BolA YP_069497.1 1150376 D 273123 CDS YP_069498.1 51595307 2953398 1150837..1151040 1 NC_006155.1 similar to Yersinia pestis YPO3159 hypothetical protein. 100% identical.; hypothetical protein 1151040 2953398 YPTB0957 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069498.1 1150837 D 273123 CDS YP_069499.1 51595308 2956706 1151113..1152417 1 NC_006155.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1152417 tig 2956706 tig Yersinia pseudotuberculosis IP 32953 trigger factor YP_069499.1 1151113 D 273123 CDS YP_069500.1 51595309 2955339 1152879..1153502 1 NC_006155.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1153502 clpP 2955339 clpP Yersinia pseudotuberculosis IP 32953 ATP-dependent Clp protease proteolytic subunit YP_069500.1 1152879 D 273123 CDS YP_069501.1 51595310 2955340 1153708..1154979 1 NC_006155.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1154979 clpX 2955340 clpX Yersinia pseudotuberculosis IP 32953 ATP-dependent protease ATP-binding subunit ClpX YP_069501.1 1153708 D 273123 CDS YP_069502.1 51595311 2955961 1155174..1157528 1 NC_006155.1 similar to Yersinia pestis YPO3155 lon, capR, deg, muc, lopA; ATP-dependent protease La (100% evalue=0); Salmonella typhi STY0492 lon; Lon protease (91% evalue=0); DNA-binding ATP-dependent protease La 1157528 lon 2955961 lon Yersinia pseudotuberculosis IP 32953 DNA-binding ATP-dependent protease La YP_069502.1 1155174 D 273123 CDS YP_069503.1 51595312 2955850 1157746..1158018 1 NC_006155.1 histone-like DNA-binding protein; transcriptional regulator HU subunit beta 1158018 hupB 2955850 hupB Yersinia pseudotuberculosis IP 32953 transcriptional regulator HU subunit beta YP_069503.1 1157746 D 273123 CDS YP_069504.1 51595313 2956309 1158319..1160205 1 NC_006155.1 similar to Yersinia pestis YPO3153 ppiD; peptidyl-prolyl cis-trans isomerase D (99.8% evalue=0); Salmonella typhimurium STM0452 cypD; peptidyl prolyl isomerase (59.4% evalue=0); peptidyl-prolyl cis-trans isomerase 1160205 ppiD 2956309 ppiD Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase YP_069504.1 1158319 D 273123 CDS YP_069505.1 51595314 2953399 1160345..1160791 1 NC_006155.1 similar to Yersinia pestis YPO3152 ybaV; exported protein (100% evalue=1.E-78); Salmonella typhi STY0495 ybaV; exported protein (44.7% evalue=4.E-15); DNA uptake protein ComEA-like protein 1160791 2953399 YPTB0964 Yersinia pseudotuberculosis IP 32953 DNA uptake protein ComEA-like protein YP_069505.1 1160345 D 273123 CDS YP_069506.1 51595315 2956958 1161145..1161552 1 NC_006155.1 similar to Yersinia pestis YPO3151 conserved hypothetical protein (100% evalue=2.E-74); Salmonella typhi STY0496 conserved hypothetical protein (69.4% evalue=2.E-48); hypothetical protein 1161552 ybaW 2956958 ybaW Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069506.1 1161145 D 273123 CDS YP_069507.1 51595316 2956959 complement(1161638..1162336) 1 NC_006155.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC 1162336 ybaX 2956959 ybaX Yersinia pseudotuberculosis IP 32953 queuosine biosynthesis protein QueC YP_069507.1 1161638 R 273123 CDS YP_069508.1 51595317 2953400 complement(1162649..1164352) 1 NC_006155.1 similar to Yersinia pestis YPO3149 conserved hypothetical protein (99.2% evalue=0); Escherichia coli Z0552 ybaE; orf, hypothetical protein (46.1% evalue=1.E-151); hypothetical protein 1164352 2953400 YPTB0967 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069508.1 1162649 R 273123 CDS YP_069509.1 51595318 2955348 1164457..1165278 1 NC_006155.1 similar to Yersinia pestis YPO3148 haloacid dehalogenase-like hydrolase (99.2% evalue=1.E-161); Escherichia coli ECs0500 hypothetical protein (57.3% evalue=1.E-86); haloacid dehalogenase 1165278 cof 2955348 cof Yersinia pseudotuberculosis IP 32953 haloacid dehalogenase YP_069509.1 1164457 D 273123 CDS YP_069510.1 51595319 2953401 complement(1165490..1166530) 1 NC_006155.1 similar to Yersinia pestis YPO3147 Pyridoxal-phosphate dependent protein (99.7% evalue=0); Salmonella typhimurium STM0458 cysteine synthase/cystathionine beta-synthase (76.8% evalue=1.E-154); pyridoxal-phosphate dependent protein 1166530 2953401 YPTB0969 Yersinia pseudotuberculosis IP 32953 pyridoxal-phosphate dependent protein YP_069510.1 1165490 R 273123 CDS YP_069511.1 51595320 2956957 1166656..1167117 1 NC_006155.1 similar to Yersinia pestis YPO3146 probable AsnC-family regulatory protein (100% evalue=3.E-84); Salmonella typhi STY0502 ybaO; hypothetical transcriptional regulator (76.8% evalue=4.E-63); transcription regulator AsnC 1167117 ybaO 2956957 ybaO Yersinia pseudotuberculosis IP 32953 transcription regulator AsnC YP_069511.1 1166656 D 273123 CDS YP_069512.1 51595321 2956007 1167219..1168985 1 NC_006155.1 similar to Yersinia pestis YPO3145 mdlA, mdl; probable ABC transporter (ATP-binding protein) (99.4% evalue=0); Escherichia coli JW0438 mdlA; Multidrag resistance-like ATP-binding protien (76.5% evalue=0); multidrug transporter membrane\ATP-binding components 1168985 mdlA 2956007 mdlA Yersinia pseudotuberculosis IP 32953 multidrug transporter membrane\ATP-binding components YP_069512.1 1167219 D 273123 CDS YP_069513.1 51595322 2956008 1168978..1170801 1 NC_006155.1 similar to Yersinia pestis YPO3144 mdlB, mdl; probable ATP transporter (ATP-binding protein) (99.1% evalue=0); Escherichia coli b0449 mdlB; multidrug resistance protein (78.7% evalue=0); multidrug transporter membrane\ATP-binding components 1170801 mdlB 2956008 mdlB Yersinia pseudotuberculosis IP 32953 multidrug transporter membrane\ATP-binding components YP_069513.1 1168978 D 273123 CDS YP_069514.1 51595323 2955700 1171253..1171591 1 NC_006155.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 1171591 glnK 2955700 glnK Yersinia pseudotuberculosis IP 32953 nitrogen regulatory protein P-II 2 YP_069514.1 1171253 D 273123 CDS YP_069515.1 51595324 2955194 1171625..1172920 1 NC_006155.1 similar to Yersinia pestis YPO3142 amtB; probable ammonium transporter (100% evalue=0); Escherichia coli b0451 amtB; probable ammonium transporter (79% evalue=0); ammonium transporter 1172920 amtB 2955194 amtB Yersinia pseudotuberculosis IP 32953 ammonium transporter YP_069515.1 1171625 D 273123 CDS YP_069516.1 51595325 2956685 complement(1173182..1174042) 1 NC_006155.1 similar to Yersinia pestis YPO3141 tesB; acyl-CoA thioesterase II (100% evalue=1.E-166); Escherichia coli ECs0506 acyl-CoA thioesterase II (78.9% evalue=1.E-132); acyl-CoA thioesterase 1174042 tesB 2956685 tesB Yersinia pseudotuberculosis IP 32953 acyl-CoA thioesterase YP_069516.1 1173182 R 273123 CDS YP_069517.1 51595326 2956960 1174299..1174820 1 NC_006155.1 similar to Yersinia pestis YPO3140 ybaY; lipoprotein (99.4% evalue=7.E-91); Escherichia coli Z0565 ybaY; glycoprotein/polysaccharide metabolism (56.2% evalue=7.E-46); lipoprotein 1174820 ybaY 2956960 ybaY Yersinia pseudotuberculosis IP 32953 lipoprotein YP_069517.1 1174299 D 273123 CDS YP_069518.1 51595327 2953402 complement(1174956..1175519) 1 NC_006155.1 similar to Yersinia pestis YPO3139 6-O-methylguanine DNA methyltransferase family protein (97.4% evalue=3.E-83); Escherichia coli Z0566 ybaZ; orf, hypothetical protein (62.6% evalue=2.E-36); 6-O-methylguanine DNA methyltransferase 1175519 2953402 YPTB0977 Yersinia pseudotuberculosis IP 32953 6-O-methylguanine DNA methyltransferase YP_069518.1 1174956 R 273123 CDS YP_069519.1 51595328 2957095 complement(1176251..1176454) 1 NC_006155.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 1176454 ymoA 2957095 ymoA Yersinia pseudotuberculosis IP 32953 hemolysin expression-modulating protein YP_069519.1 1176251 R 273123 CDS YP_069520.1 51595329 2953403 complement(1176503..1176871) 1 NC_006155.1 similar to Yersinia pestis YPO3137 conserved hypothetical protein (100% evalue=2.E-68); Escherichia coli b0461 ybaJ; hypothetical 14.6 kD protein in hha-acrB intergenic region (65.7% evalue=2.E-40); hypothetical protein 1176871 2953403 YPTB0979 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069520.1 1176503 R 273123 CDS YP_069521.1 51595330 2953404 complement(1177030..1177383) 1 NC_006155.1 similar to Yersinia pestis YPO3136 hypothetical protein (100% evalue=2.E-63); hypothetical protein 1177383 2953404 YPTB0980 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069521.1 1177030 R 273123 CDS YP_069522.1 51595331 2953405 complement(1178247..1178390) 1 NC_006155.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1178390 rpmJ 2953405 rpmJ Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L36 YP_069522.1 1178247 R 273123 CDS YP_069523.1 51595332 2957092 complement(1178406..1178666) 1 NC_006155.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1178666 rpmE2 2957092 rpmE2 Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L31 YP_069523.1 1178406 R 273123 CDS YP_069524.1 51595333 2955171 complement(1178852..1182004) 1 NC_006155.1 similar to Yersinia pestis YPO3133 acrB, acrE; multidrug efflux protein (99.8% evalue=0); Salmonella typhimurium STM0475 acrB; RND family, acridine efflux pump (84% evalue=0); acridine/multidrug efflux system protein 1182004 acrB 2955171 acrB Yersinia pseudotuberculosis IP 32953 acridine/multidrug efflux system protein YP_069524.1 1178852 R 273123 CDS YP_069525.1 51595334 2955170 complement(1182021..1183208) 1 NC_006155.1 similar to Yersinia pestis YPO3132 acrA, mtcA; multidrug efflux protein (100% evalue=0); Salmonella typhimurium STM0476 acrA; acridine efflux pump (73.9% evalue=1.E-162); acridine efflux pump, membrane fusion (MFP/HlyD) family protein 1183208 acrA 2955170 acrA Yersinia pseudotuberculosis IP 32953 acridine efflux pump, membrane fusion (MFP/HlyD) family protein YP_069525.1 1182021 R 273123 CDS YP_069526.1 51595335 2955172 1183352..1184008 1 NC_006155.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 1184008 acrR 2955172 acrR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor AcrR YP_069526.1 1183352 D 273123 CDS YP_069527.1 51595336 2956986 1184021..1184374 1 NC_006155.1 similar to Yersinia pestis YPO3130 conserved hypothetical protein (100% evalue=2.E-60); Salmonella typhimurium STM1769 ychN; ACR involved in intracellular sulfur reduction (81.1% evalue=3.E-49); hypothetical protein 1184374 ychN 2956986 ychN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069527.1 1184021 D 273123 CDS YP_069528.1 51595337 2955925 1184613..1188032 1 NC_006155.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1188032 kefA 2955925 kefA Yersinia pseudotuberculosis IP 32953 potassium efflux protein KefA YP_069528.1 1184613 D 273123 CDS YP_069529.1 51595338 2956955 complement(1188406..1188561) 1 NC_006155.1 similar to Yersinia pestis YPO3128 conserved hypothetical protein (100% evalue=6.E-22); Salmonella typhimurium STM0480 ybaM; inner membrane protein (54.9% evalue=1.E-07); hypothetical protein 1188561 ybaM 2956955 ybaM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069529.1 1188406 R 273123 CDS YP_069530.1 51595339 2953406 complement(1188732..1189268) 1 NC_006155.1 similar to Yersinia pestis YPO3127 priC; primosomal replication protein n'' (98.8% evalue=1.E-93); Salmonella typhimurium STM0481 priC; primosomal replication protein N (39.2% evalue=2.E-26); primosomal replication protein N'' 1189268 2953406 YPTB0989 Yersinia pseudotuberculosis IP 32953 primosomal replication protein N'' YP_069530.1 1188732 R 273123 CDS YP_069531.1 51595340 2956956 1189469..1189849 1 NC_006155.1 similar to Salmonella typhi STY0526 ybaN; membrane protein (69.6% evalue=6.E-49); Salmonella typhimurium STM0482 ybaN; phage gene 58 (69.6% evalue=6.E-49); hypothetical protein 1189849 ybaN 2956956 ybaN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069531.1 1189469 D 273123 CDS YP_069532.1 51595341 2955201 1190088..1190651 1 NC_006155.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1190651 apt 2955201 apt Yersinia pseudotuberculosis IP 32953 adenine phosphoribosyltransferase YP_069532.1 1190088 D 273123 CDS YP_069533.1 51595342 2955478 1191307..1193283 1 NC_006155.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1193283 dnaX 2955478 dnaX Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunits gamma and tau YP_069533.1 1191307 D 273123 CDS YP_069534.1 51595343 2956953 1193339..1193671 1 NC_006155.1 similar to Yersinia pestis YPO3121 conserved hypothetical protein (100% evalue=4.E-57); Salmonella typhimurium STM0485 ybaB; cytoplasmic protein (91.8% evalue=3.E-52); hypothetical protein 1193671 ybaB 2956953 ybaB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069534.1 1193339 D 273123 CDS YP_069535.1 51595344 2956421 1193671..1194276 1 NC_006155.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1194276 recR 2956421 recR Yersinia pseudotuberculosis IP 32953 recombination protein RecR YP_069535.1 1193671 D 273123 CDS YP_069536.1 51595345 2955844 1194468..1196342 1 NC_006155.1 molecular chaperone; heat shock protein 90 1196342 htpG 2955844 htpG Yersinia pseudotuberculosis IP 32953 heat shock protein 90 YP_069536.1 1194468 D 273123 CDS YP_069537.1 51595346 2955175 1196569..1197213 1 NC_006155.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1197213 adk 2955175 adk Yersinia pseudotuberculosis IP 32953 adenylate kinase YP_069537.1 1196569 D 273123 CDS YP_069538.1 51595347 2955780 1197303..1198265 1 NC_006155.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1198265 hemH 2955780 hemH Yersinia pseudotuberculosis IP 32953 ferrochelatase YP_069538.1 1197303 D 273123 CDS YP_069539.1 51595348 2955441 1198863..1199852 1 NC_006155.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 1199852 ddhD 2955441 ddhD Yersinia pseudotuberculosis IP 32953 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_069539.1 1198863 D 273123 CDS YP_069540.1 51595349 2955438 1199878..1200663 1 NC_006155.1 similar to Yersinia pestis YPO3115 ddhA, rfbF; glucose-1-phosphate cytidylyltransferase (99.6% evalue=1.E-155); Salmonella typhimurium STM2092 rfbF; glucose-1-phosphate cytidylyltransferase (80.5% evalue=1.E-126); glucose-1-phosphate cytidylyltransferase 1200663 ddhA 2955438 ddhA Yersinia pseudotuberculosis IP 32953 glucose-1-phosphate cytidylyltransferase YP_069540.1 1199878 D 273123 CDS YP_069541.1 51595350 2955439 1200668..1201741 1 NC_006155.1 similar to Salmonella typhi STY2301 rfbG; CDP-glucose 4,6-dehydratase (73.5% evalue=1.E-161); Salmonella typhimurium STM2091 rfbG; CDP-glucose 4,6-dehydratase (73.2% evalue=1.E-160); CDP-glucose 4,6-dehydratase 1201741 ddhB 2955439 ddhB Yersinia pseudotuberculosis IP 32953 CDP-glucose 4,6-dehydratase YP_069541.1 1200668 D 273123 CDS YP_069542.1 51595351 2955440 1201759..1203072 1 NC_006155.1 similar to Yersinia pestis YPO3113 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydratase (99.7% evalue=0); Salmonella typhi STY2300 rfbH; dehydratase RfbH (87.4% evalue=0); CDP-4-keto-6-deoxy-D-glucose-3-dehydratase 1203072 ddhC 2955440 ddhC Yersinia pseudotuberculosis IP 32953 CDP-4-keto-6-deoxy-D-glucose-3-dehydratase YP_069542.1 1201759 D 273123 CDS YP_069543.1 51595352 2956332 1203109..1203966 1 NC_006155.1 similar to Yersinia pestis YPO3112 prt, rfbS; paratose synthase (99.2% evalue=1.E-159); Salmonella typhi STY2299 rfbS; paratose synthase (43.9% evalue=2.E-64); paratose synthase 1203966 prt 2956332 prt Yersinia pseudotuberculosis IP 32953 paratose synthase YP_069543.1 1203109 D 273123 CDS YP_069544.1 51595353 2956893 1203967..1205250 1 NC_006155.1 similar to Yersinia pestis YPO3111 wbyH; exported protein (99% evalue=0); P. horikoshii PH0425 hypothetical protein (25.1% evalue=1.E-32); hypothetical protein 1205250 wbyH 2956893 wbyH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069544.1 1203967 D 273123 CDS YP_069545.1 51595354 2956900 1205339..1206682 1 NC_006155.1 similar to Yersinia pestis YPO3110 wzx; O-unit flippase (90.3% evalue=0); O-unit flippase 1206682 wzx 2956900 wzx Yersinia pseudotuberculosis IP 32953 O-unit flippase YP_069545.1 1205339 D 273123 CDS YP_069546.1 51595355 2953407 1206693..1207676 1 NC_006155.1 similar to Methanocaldococcus jannaschii MJ1057 glycosyl transferase, (25.3% evalue=5.E-10); B. halodurans BH3713 glycosyltransferase (29.7% evalue=2.E-13); hypothetical protein 1207676 2953407 YPTB1005 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069546.1 1206693 D 273123 CDS YP_069547.1 51595356 2956894 1207848..1208990 1 NC_006155.1 similar to Yersinia pestis YPO3107 wbyJ; mannosyltransferase (99.7% evalue=0); Clostridium acetobutylicum CAC3051 glycosyltransferase (26.6% evalue=2.E-08); mannosyltransferase 1208990 wbyJ 2956894 wbyJ Yersinia pseudotuberculosis IP 32953 mannosyltransferase YP_069547.1 1207848 D 273123 CDS YP_069548.1 51595357 2953408 1208987..1210207 1 NC_006155.1 O-unit polymerase-like protein 1210207 2953408 YPTB1007 Yersinia pseudotuberculosis IP 32953 O-unit polymerase-like protein YP_069548.1 1208987 D 273123 CDS YP_069549.1 51595358 2956895 1210456..1211469 1 NC_006155.1 similar to Yersinia pestis YPO3104 wbyK; mannosyltransferase (99.7% evalue=0); Synechocystis slr1064 rfbU, mtfA; mannosyltransferase B (36.3% evalue=2.E-41); mannosyltransferase 1211469 wbyK 2956895 wbyK Yersinia pseudotuberculosis IP 32953 mannosyltransferase YP_069549.1 1210456 D 273123 CDS YP_069550.1 51595359 2955730 1211485..1212606 1 NC_006155.1 similar to Escherichia coli JW2038 gmd; GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase) (79.6% evalue=1.E-177); Escherichia coli Z3217 gmd; GDP-D-mannose dehydratase (79.6% evalue=1.E-177); GDP-D-mannose dehydratase 1212606 gmd 2955730 gmd Yersinia pseudotuberculosis IP 32953 GDP-D-mannose dehydratase YP_069550.1 1211485 D 273123 CDS YP_069551.1 51595360 2955532 1212612..1213577 1 NC_006155.1 similar to Escherichia coli b2052 fcl, wcaG; GDP-fucose synthetase (75.3% evalue=1.E-142); Escherichia coli JW2037 fcl; GDP-fucose synthetase (75.3% evalue=1.E-142); GDP-fucose synthetase 1213577 fcl 2955532 fcl Yersinia pseudotuberculosis IP 32953 GDP-fucose synthetase YP_069551.1 1212612 D 273123 CDS YP_069552.1 51595361 2955996 1213743..1215149 1 NC_006155.1 similar to Yersinia pestis YPO3099 manC, rfbM; mannose-1-phosphate guanylyltransferase (100% evalue=0); Salmonella typhimurium STM2105 manC; mannose-1-phosphate in colanic acid gene cluster (61.8% evalue=1.E-167); mannose-1-phosphate guanylyltransferase 1215149 manC 2955996 manC Yersinia pseudotuberculosis IP 32953 mannose-1-phosphate guanylyltransferase YP_069552.1 1213743 D 273123 CDS YP_069553.1 51595362 2956896 1215152..1215895 1 NC_006155.1 similar to Yersinia pestis YPO3098 wbyL; probable glycosyltransferase (100% evalue=1.E-140); Helicobacter pylori HP0102 conserved hypothetical protein (43.8% evalue=6.E-55); glycosyltransferase 1215895 wbyL 2956896 wbyL Yersinia pseudotuberculosis IP 32953 glycosyltransferase YP_069553.1 1215152 D 273123 CDS YP_069554.1 51595363 2955994 1215900..1217273 1 NC_006155.1 similar to Yersinia pestis YPO3097 manB, rfbK; phosphomannomutase (99.7% evalue=0); Escherichia coli JW2033 manB; Phosphomannomutase (PMM) (73.6% evalue=0); phosphomannomutase 1217273 manB 2955994 manB Yersinia pseudotuberculosis IP 32953 phosphomannomutase YP_069554.1 1215900 D 273123 CDS YP_069555.1 51595364 2956902 1217321..1218472 1 NC_006155.1 part of the ferric enterobactin transport system; necessary for enetrobactin uptake; ferric enterobactin transport protein FepE 1218472 wzz 2956902 wzz Yersinia pseudotuberculosis IP 32953 ferric enterobactin transport protein FepE YP_069555.1 1217321 D 273123 CDS YP_069556.1 51595365 2955752 1218676..1219980 1 NC_006155.1 similar to Yersinia pestis YPO3095 gsk; inosine-guanosine kinase (100% evalue=0); Salmonella typhimurium STM0491 gsk; inosine-guanosine kinase (84.7% evalue=0); inosine-guanosine kinase 1219980 gsk 2955752 gsk Yersinia pseudotuberculosis IP 32953 inosine-guanosine kinase YP_069556.1 1218676 D 273123 CDS YP_069557.1 51595366 2956480 complement(1220077..1221768) 1 NC_006155.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 1221768 rosB 2956480 rosB Yersinia pseudotuberculosis IP 32953 cation:proton antiport protein YP_069557.1 1220077 R 273123 CDS YP_069558.1 51595367 2956479 complement(1222003..1223217) 1 NC_006155.1 similar to Yersinia pestis YPO3093 rosA, fsr; membrane efflux protein (99.7% evalue=0); Salmonella typhimurium STM0493 fsr; MFS family of transport protein (77.1% evalue=1.E-171); Citation: Bengoechea and Skurnik (2000) Mol. Microbiol. 37:67-80; MFS cationic anti peptides (CAMPs) efflux/K+ antiporter, rosA subunit 1223217 rosA 2956479 rosA Yersinia pseudotuberculosis IP 32953 MFS cationic anti peptides (CAMPs) efflux/K+ antiporter, rosA subunit YP_069558.1 1222003 R 273123 CDS YP_069559.1 51595368 2953410 complement(1225257..1225496) 1 NC_006155.1 similar to Yersinia pestis YPO3089 hypothetical protein (100% evalue=5.E-39); hypothetical protein 1225496 2953410 YPTB1019 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069559.1 1225257 R 273123 CDS YP_069560.1 51595369 2953411 complement(1225833..1226312) 1 NC_006155.1 similar to Yersinia pestis YPO3088 conserved hypothetical protein (99.3% evalue=2.E-84); Escherichia coli b0481 ybaK; hypothetical 17.1 kD protein in ushA-tesA intergenic region (76.7% evalue=9.E-65); hypothetical protein 1226312 2953411 YPTB1020 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069560.1 1225833 R 273123 CDS YP_069561.1 51595370 2953412 complement(1226576..1227385) 1 NC_006155.1 similar to Yersinia pestis YPO3087 conserved hypothetical protein (100% evalue=1.E-155); Escherichia coli b0482 ybaP; hypothetical 29.9 kD protein in ushA-tesA intergenic region (56.4% evalue=5.E-81); hypothetical protein 1227385 2953412 YPTB1021 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069561.1 1226576 R 273123 CDS YP_069562.1 51595371 2955256 complement(1227782..1230667) 1 NC_006155.1 similar to Yersinia pestis YPO3086 ybaR; Cu2+-exporting ATPase (99.7% evalue=0); Escherichia coli ECs0537 Cu2+-exporting ATPase (66.3% evalue=0); copper exporting ATPase 1230667 copA 2955256 copA Yersinia pseudotuberculosis IP 32953 copper exporting ATPase YP_069562.1 1227782 R 273123 CDS YP_069563.1 51595372 2955378 1230874..1231293 1 NC_006155.1 similar to Yersinia pestis YPO3085 cueR; regulatory protein (100% evalue=1.E-75); Salmonella typhimurium STM0499 cueR; heavy metal transcriptional repressor (MerR family) (72.9% evalue=2.E-54); MerR family transcriptional regulator 1231293 cueR 2955378 cueR Yersinia pseudotuberculosis IP 32953 MerR family transcriptional regulator YP_069563.1 1230874 D 273123 CDS YP_069564.1 51595373 2953413 complement(1231492..1231941) 1 NC_006155.1 similar to Yersinia pestis YPO3084 ybbJ; membrane protein (100% evalue=2.E-84); Escherichia coli JW0477 ybbJ; Hypothetical protein (58.2% evalue=2.E-47); hypothetical protein 1231941 2953413 YPTB1024 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069564.1 1231492 R 273123 CDS YP_069565.1 51595374 2953414 complement(1231944..1232858) 1 NC_006155.1 similar to Yersinia pestis YPO3083 conserved hypothetical protein (100% evalue=1.E-164); Salmonella typhimurium STM0501 ybbK; inner membrane protein (84.2% evalue=1.E-142); hypothetical protein 1232858 2953414 YPTB1025 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069565.1 1231944 R 273123 CDS YP_069566.1 51595375 2953415 complement(1233053..1233922) 1 NC_006155.1 similar to Yersinia pestis YPO3082 ybbN; thioredoxin (99.6% evalue=1.E-158); Salmonella typhi STY0550 ybbN; thioredoxin-like protein (71.9% evalue=1.E-114); thioredoxin 1233922 2953415 YPTB1026 Yersinia pseudotuberculosis IP 32953 thioredoxin YP_069566.1 1233053 R 273123 CDS YP_069567.1 51595376 2953416 complement(1233999..1234775) 1 NC_006155.1 similar to Yersinia pestis YPO3081 ybbO; probable short-chain dehydrogenase (100% evalue=1.E-143); Escherichia coli ECs0556 oxidoreductase (68.3% evalue=5.E-99); short chain dehydrogenase 1234775 2953416 YPTB1027 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_069567.1 1233999 R 273123 CDS YP_069568.1 51595377 2956684 complement(1235162..1235800) 1 NC_006155.1 similar to Yersinia pestis YPO3080 tesA, apeA, pldC; acyl-CoA thioesterase (100% evalue=1.E-120); Escherichia coli b0494 tesA, apeA; acyl-CoA thioesterase I precursor (protease I) (71.1% evalue=3.E-84); multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 1235800 tesA 2956684 tesA Yersinia pseudotuberculosis IP 32953 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 YP_069568.1 1235162 R 273123 CDS YP_069569.1 51595378 2956961 1235768..1236454 1 NC_006155.1 similar to Yersinia pestis YPO3079 ybbA; ABC transporter ATP-binding protein (99.5% evalue=1.E-123); Escherichia coli ECs0557 ATP-binding component of a transport system (78.9% evalue=1.E-95); ABC transporter ATP-binding protein 1236454 ybbA 2956961 ybbA Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_069569.1 1235768 D 273123 CDS YP_069570.1 51595379 2953417 1236451..1238880 1 NC_006155.1 similar to Yersinia pestis YPO3078 ybbP; permease (99.1% evalue=0); Salmonella typhimurium STM0508 ybbP; inner membrane protein (68.9% evalue=0); permease 1238880 2953417 YPTB1030 Yersinia pseudotuberculosis IP 32953 permease YP_069570.1 1236451 D 273123 CDS YP_069571.1 51595380 2956374 complement(1238924..1239988) 1 NC_006155.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1239988 purK 2956374 purK Yersinia pseudotuberculosis IP 32953 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_069571.1 1238924 R 273123 CDS YP_069572.1 51595381 2956370 complement(1239985..1240509) 1 NC_006155.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit 1240509 purE 2956370 purE Yersinia pseudotuberculosis IP 32953 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_069572.1 1239985 R 273123 CDS YP_069573.1 51595382 2953418 complement(1240825..1241547) 1 NC_006155.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1241547 2953418 YPTB1033 Yersinia pseudotuberculosis IP 32953 UDP-2,3-diacylglucosamine hydrolase YP_069573.1 1240825 R 273123 CDS YP_069574.1 51595383 2956307 complement(1241558..1242052) 1 NC_006155.1 similar to Yersinia pestis YPO3074 ppiB; peptidyl-prolyl cis-trans isomerase B (100% evalue=8.E-94); Escherichia coli b0525 ppiB; peptidyl-prolyl cis-trans isomerase B (ppiase B) (rotamase B) (84.7% evalue=7.E-79); peptidyl-prolyl cis-trans isomerase B 1242052 ppiB 2956307 ppiB Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase B YP_069574.1 1241558 R 273123 CDS YP_069575.1 51595384 2955414 1242263..1243648 1 NC_006155.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1243648 cysS 2955414 cysS Yersinia pseudotuberculosis IP 32953 cysteinyl-tRNA synthetase YP_069575.1 1242263 D 273123 CDS YP_069576.1 51595385 2953419 complement(1243890..1244102) 1 NC_006155.1 similar to Yersinia pestis YPO2825 conserved hypothetical protein (100% evalue=9.E-35); Salmonella typhi STY0587 ybcJ; conserved hypothetical protein (72.8% evalue=5.E-23); hypothetical protein 1244102 2953419 YPTB1036 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069576.1 1243890 R 273123 CDS YP_069577.1 51595386 2955633 complement(1244117..1244983) 1 NC_006155.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1244983 folD 2955633 folD Yersinia pseudotuberculosis IP 32953 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_069577.1 1244117 R 273123 CDS YP_069578.1 51595387 2953420 complement(1245351..1245533) 1 NC_006155.1 similar to Yersinia pestis YPO2823 putativ regulator. 100% identical.; hypothetical protein 1245533 2953420 YPTB1038 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069578.1 1245351 R 273123 CDS YP_069579.1 51595388 2953421 complement(1245792..1245992) 1 NC_006155.1 similar to Yersinia pestis YPO2822 hypothetical protein. 96% identical.; hypothetical protein 1245992 2953421 YPTB1039 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069579.1 1245792 R 273123 CDS YP_069580.1 51595389 2953422 complement(1246106..1246753) 1 NC_006155.1 similar to Yersinia pestis YPO2821 hypothetical protein (98.2% evalue=1.E-61); hypothetical protein 1246753 2953422 YPTB1040 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069580.1 1246106 R 273123 CDS YP_069581.1 51595390 2953423 complement(1246738..1247076) 1 NC_006155.1 similar to Yersinia pestis YPO2820 hypothetical protein (100% evalue=3.E-61); hypothetical protein 1247076 2953423 YPTB1041 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069581.1 1246738 R 273123 CDS YP_069582.1 51595391 2953425 1247610..1247855 1 NC_006155.1 hypothetical protein 1247855 2953425 YPTB1043 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069582.1 1247610 D 273123 CDS YP_069583.1 51595392 2953426 1248255..1248857 1 NC_006155.1 similar to Yersinia pestis YPO2817 CDP-alcohol phosphatidyltransferase (99.5% evalue=1.E-110); Escherichia coli JW1405 hypothetical protein (55.8% evalue=1.E-57); CDP-alcohol phosphatidyltransferase 1248857 2953426 YPTB1044 Yersinia pseudotuberculosis IP 32953 CDP-alcohol phosphatidyltransferase YP_069583.1 1248255 D 273123 CDS YP_069584.1 51595393 2953427 1248850..1249779 1 NC_006155.1 similar to Yersinia pestis YPO2816 ynbB; phosphatidate cytidylyltransferase (99.3% evalue=1.E-179); Vibrio cholerae VC1936 phosphatidate cytidylyltransferase, (52.2% evalue=4.E-93); phosphatidate cytidylyltransferase 1249779 2953427 YPTB1045 Yersinia pseudotuberculosis IP 32953 phosphatidate cytidylyltransferase YP_069584.1 1248850 D 273123 CDS YP_069585.1 51595394 2953428 1249789..1250421 1 NC_006155.1 similar to Yersinia pestis YPO2815 acyltransferase (100% evalue=1.E-120); Vibrio cholerae VC1937 conserved hypothetical protein (47.8% evalue=2.E-45); acyltransferase 1250421 2953428 YPTB1046 Yersinia pseudotuberculosis IP 32953 acyltransferase YP_069585.1 1249789 D 273123 CDS YP_069586.1 51595395 2953429 1250418..1252181 1 NC_006155.1 similar to Yersinia pestis YPO2814 conserved hypothetical protein (99.4% evalue=0); Escherichia coli ECs2012 hypothetical protein (66.2% evalue=0); hypothetical protein 1252181 2953429 YPTB1047 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069586.1 1250418 D 273123 CDS YP_069587.1 51595396 2953430 1252174..1253493 1 NC_006155.1 similar to Yersinia pestis YPO2813 ynbD; dual specificity phosphatase (99.5% evalue=0); Escherichia coli JW1408 ynbD; Hypothetical protein (49.5% evalue=1.E-114); dual specificity phosphatase 1253493 2953430 YPTB1048 Yersinia pseudotuberculosis IP 32953 dual specificity phosphatase YP_069587.1 1252174 D 273123 CDS YP_069588.1 51595397 2953431 1253505..1253876 1 NC_006155.1 similar to Yersinia pestis YPO2812 membrane protein (98.3% evalue=4.E-65); hypothetical protein 1253876 2953431 YPTB1049 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069588.1 1253505 D 273123 CDS YP_069589.1 51595398 2953432 1253973..1254278 1 NC_006155.1 similar to Yersinia pestis YPO2811 membrane protein (100% evalue=5.E-58); hypothetical protein 1254278 2953432 YPTB1050 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069589.1 1253973 D 273123 CDS YP_069590.1 51595399 2953433 1254581..1255474 1 NC_006155.1 similar to Yersinia pestis YPO2807 ptxR; LysR-family transcriptional regulatory protein (99.6% evalue=1.E-169); Xylella fastidiosa XF1752 transcriptional regulator (LysR family) (52.8% evalue=3.E-92); LysR family transcriptional regulator 1255474 2953433 YPTB1051 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_069590.1 1254581 D 273123 CDS YP_069591.1 51595400 2953434 complement(1255529..1256518) 1 NC_006155.1 similar to Yersinia pestis YPO2806 aldo/keto reductase (100% evalue=0); Sinorhizobium meliloti SMa0563 aldehyde or keto oxidase, probable (64.3% evalue=1.E-113); aldo/keto reductase 1256518 2953434 YPTB1052 Yersinia pseudotuberculosis IP 32953 aldo/keto reductase YP_069591.1 1255529 R 273123 CDS YP_069592.1 51595401 2953435 complement(1256544..1257395) 1 NC_006155.1 similar to Yersinia pestis YPO2805 aldo/keto reductase (99.6% evalue=1.E-161); Escherichia coli ECs0335 oxidoreductase (91.9% evalue=5.E-98); aldo/keto reductase 1257395 2953435 YPTB1053 Yersinia pseudotuberculosis IP 32953 aldo/keto reductase YP_069592.1 1256544 R 273123 CDS YP_069593.1 51595402 2953436 1257868..1259496 1 NC_006155.1 similar to Yersinia pestis YPO2804 hypothetical protein (99.8% evalue=0); hypothetical protein 1259496 2953436 YPTB1054 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069593.1 1257868 D 273123 CDS YP_069594.1 51595403 2955284 complement(1259575..1261956) 1 NC_006155.1 similar to Yersinia pestis YPO2803 bglB; beta-glucosidase (98.2% evalue=0); Thermotoga maritima TM0025 beta-glucosidase (41.1% evalue=1.E-152); beta-glucosidase 1261956 bglB 2955284 bglB Yersinia pseudotuberculosis IP 32953 beta-glucosidase YP_069594.1 1259575 R 273123 CDS YP_069595.1 51595404 2953437 complement(1262112..1262642) 1 NC_006155.1 similar to Yersinia pestis YPO2802 membrane protein (97.7% evalue=2.E-93); Pasteurella multocida PM0986 unknown (32.9% evalue=8.E-16); hypothetical protein 1262642 2953437 YPTB1056 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069595.1 1262112 R 273123 CDS YP_069596.1 51595405 2953438 complement(1262635..1264842) 1 NC_006155.1 similar to Yersinia pestis YPO2801 membrane protein (99% evalue=0); Pasteurella multocida PM0986 unknown (25.7% evalue=3.E-13); hypothetical protein 1264842 2953438 YPTB1057 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069596.1 1262635 R 273123 CDS YP_069597.1 51595406 2953439 1265226..1266098 1 NC_006155.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 1266098 2953439 YPTB1058 Yersinia pseudotuberculosis IP 32953 23S rRNA pseudouridine synthase F YP_069597.1 1265226 D 273123 CDS YP_069598.1 51595407 2953440 1266316..1267437 1 NC_006155.1 similar to Escherichia coli b1128 ycfD; hypothetical 42.6 kD protein in pepT-phoQ intergenic region (67.3% evalue=1.E-154); Escherichia coli JW1114 ycfD; Hypothetical protein (67.3% evalue=1.E-154); hypothetical protein 1267437 2953440 YPTB1059 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069598.1 1266316 D 273123 CDS YP_069599.1 51595408 2953442 complement(1268552..1270468) 1 NC_006155.1 similar to Yersinia pestis YPO3028 autotransporter (39.1% evalue=1.E-84); pertactin family virulence factor/autotransporter 1270468 2953442 YPTB1061 Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_069599.1 1268552 R 273123 CDS YP_069600.1 51595409 2953443 1271277..1271516 1 NC_006155.1 similar to Yersinia pestis YPO2795 hypothetical protein (100% evalue=4.E-38); hypothetical protein 1271516 2953443 YPTB1062 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069600.1 1271277 D 273123 CDS YP_069601.1 51595410 2953444 1271555..1271806 1 NC_006155.1 similar to Yersinia pestis YPO2794 hypothetical protein (98.7% evalue=2.E-40); hypothetical protein 1271806 2953444 YPTB1063 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069601.1 1271555 D 273123 CDS YP_069602.1 51595411 2953445 1271830..1272309 1 NC_006155.1 similar to Yersinia pestis YPO2962 conserved hypothetical protein (65.4% evalue=3.E-58); hypothetical protein 1272309 2953445 YPTB1064 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069602.1 1271830 D 273123 CDS YP_069603.1 51595412 2953446 complement(1272414..1272815) 1 NC_006155.1 similar to Yersinia pestis YPO2590 hypothetical protein, 100% identical; hypothetical protein 1272815 2953446 YPTB1065 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069603.1 1272414 R 273123 CDS YP_069604.1 51595413 2953447 complement(1273441..1274298) 1 NC_006155.1 similar to Yersinia pestis YPO2863 membrane protein (40% evalue=6.E-41); hypothetical protein 1274298 2953447 YPTB1066 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069604.1 1273441 R 273123 CDS YP_069605.1 51595414 2956602 1274971..1275216 1 NC_006155.1 similar to Yersinia pestis YPO2785 sfsB, nlp, sfs7; DNA-binding protein (100% evalue=5.E-42); Salmonella typhi STY4673 cII; transcriptional regulatory protein (73.2% evalue=1.E-25); DNA-binding protein 1275216 sfsB 2956602 sfsB Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_069605.1 1274971 D 273123 CDS YP_069606.1 51595415 2956296 complement(1275429..1277792) 1 NC_006155.1 similar to Rickettsia conorii RC0249 pbpC; bifunctional penicillin-binding protein 1C (39.7% evalue=1.E-163); Pasteurella multocida PM0644 ponC; bifunctional penicillin-binding protein 1C (45.8% evalue=0); bifunctional penicillin-binding protein 1C 1277792 ponC 2956296 ponC Yersinia pseudotuberculosis IP 32953 bifunctional penicillin-binding protein 1C YP_069606.1 1275429 R 273123 CDS YP_069607.1 51595416 2953448 complement(1277849..1283818) 1 NC_006155.1 similar to Yersinia pestis YPO2573 membrane protein (99.4% evalue=0); Pasteurella multocida PM0659 hypothetical R. prowazekii (38.4% evalue=0); hypothetical protein 1283818 2953448 YPTB1069 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069607.1 1277849 R 273123 CDS YP_069608.1 51595417 2953449 complement(1284480..1285334) 1 NC_006155.1 similar to Yersinia pestis YPO2576 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM4417 transcriptional regulator (62.8% evalue=2.E-89); hypothetical protein 1285334 2953449 YPTB1070 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069608.1 1284480 R 273123 CDS YP_069609.1 51595418 2953450 1285676..1287202 1 NC_006155.1 similar to Yersinia pestis YPO2577 methylmalonate-semialdehyde dehydrogenase (99.6% evalue=0); Salmonella typhimurium STM4421 NAD-dependent aldehyde dehydrogenase (63.8% evalue=0); methylmalonate-semialdehyde dehydrogenase 1287202 2953450 YPTB1071 Yersinia pseudotuberculosis IP 32953 methylmalonate-semialdehyde dehydrogenase YP_069609.1 1285676 D 273123 CDS YP_069610.1 51595419 2953451 1287216..1289162 1 NC_006155.1 similar to Yersinia pestis YPO2578 thiamine pyrophosphate-dependent protein (99.8% evalue=0); C. perfringens CPE0089 iolD; myo-inositol catabolism protein (56.2% evalue=0); thiamine pyrophosphate-dependent protein 1289162 2953451 YPTB1072 Yersinia pseudotuberculosis IP 32953 thiamine pyrophosphate-dependent protein YP_069610.1 1287216 D 273123 CDS YP_069611.1 51595420 2953452 1289456..1290442 1 NC_006155.1 similar to Agrobacterium tumefaciens Atu4012 idhA; myo-inositol 2-dehydrogenase (48.9% evalue=1.E-81); Agrobacterium tumefaciens AGR_L_1682 myo-inositol 2-dehydrogenase (48.9% evalue=1.E-81); myo-inositol 2-dehydrogenase 1290442 2953452 YPTB1073 Yersinia pseudotuberculosis IP 32953 myo-inositol 2-dehydrogenase YP_069611.1 1289456 D 273123 CDS YP_069612.1 51595421 2953453 1290568..1291497 1 NC_006155.1 similar to Yersinia pestis YPO2581 sugar-binding periplasmic protein (100% evalue=1.E-171); Caulobacter crescentus CC0859 sugar ABC transporter, periplasmic sugar-binding protein (41% evalue=3.E-63); sugar ABC transporter substrate-binding protein 1291497 2953453 YPTB1074 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069612.1 1290568 D 273123 CDS YP_069613.1 51595422 2953454 1291546..1293093 1 NC_006155.1 similar to Yersinia pestis YPO2582 sugar transport ATP-binding protein (99% evalue=0); Caulobacter crescentus CC0860 sugar ABC transporter, ATP-binding protein (52.1% evalue=1.E-135); sugar ABC transporter ATP-binding protein 1293093 2953454 YPTB1075 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_069613.1 1291546 D 273123 CDS YP_069614.1 51595423 2953455 1293105..1294133 1 NC_006155.1 similar to Yersinia pestis YPO2583 sugar transport system permease (100% evalue=0); Caulobacter crescentus CC0861 sugar ABC transporter, permease (54.8% evalue=1.E-101); sugar ABC transporter permease 1294133 2953455 YPTB1076 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069614.1 1293105 D 273123 CDS YP_069615.1 51595424 2953456 1294157..1295290 1 NC_006155.1 similar to Yersinia pestis YPO2584 conserved hypothetical protein (99.2% evalue=0); Sinorhizobium meliloti SMc01163 oxidoreductase (46.5% evalue=2.E-92); hypothetical protein 1295290 2953456 YPTB1077 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069615.1 1294157 D 273123 CDS YP_069616.1 51595425 2953457 1295339..1297309 1 NC_006155.1 similar to Yersinia pestis YPO2585 carbohydrate kinase (99.6% evalue=0); Ralstonia solanacearum RS02748 iolC, RSc1240; probable transferase kinase (55.5% evalue=0); carbohydrate kinase 1297309 2953457 YPTB1078 Yersinia pseudotuberculosis IP 32953 carbohydrate kinase YP_069616.1 1295339 D 273123 CDS YP_069617.1 51595426 2953458 1297516..1298436 1 NC_006155.1 similar to Yersinia pestis YPO2586 conserved hypothetical protein (99.3% evalue=1.E-176); Mesorhizobium loti mlr2437 rhizopine catabolism protein MocC (52% evalue=1.E-87); hypothetical protein 1298436 2953458 YPTB1079 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069617.1 1297516 D 273123 CDS YP_069618.1 51595427 2953459 1298446..1299261 1 NC_006155.1 similar to Yersinia pestis YPO2587 conserved hypothetical protein (98.8% evalue=1.E-161); Salmonella typhimurium STM4420 inner membrane protein (64% evalue=2.E-96); hypothetical protein 1299261 2953459 YPTB1080 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069618.1 1298446 D 273123 CDS YP_069619.1 51595428 2953460 complement(1299464..1299766) 1 NC_006155.1 hypothetical protein 1299766 2953460 YPTB1081 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069619.1 1299464 R 273123 CDS YP_069620.1 51595429 2953461 1299831..1301621 1 NC_006155.1 similar to Yersinia pestis YPO2588 ABC transport protein (100% evalue=0); Ralstonia solanacearum RS04417 probable composite ATP-binding transmembrane ABC transporter protein (53.8% evalue=1.E-180); ABC transporter 1301621 2953461 YPTB1082 Yersinia pseudotuberculosis IP 32953 ABC transporter YP_069620.1 1299831 D 273123 CDS YP_069621.1 51595430 2953462 complement(1301637..1301924) 1 NC_006155.1 similar to Yersinia pestis YPO2589 conserved hypothetical protein (100% evalue=8.E-52); Clostridium acetobutylicum CAC3394 uncharacterized conserved protein, YGIN family (40% evalue=1.E-11); hypothetical protein 1301924 2953462 YPTB1083 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069621.1 1301637 R 273123 CDS YP_069622.1 51595431 2953463 complement(1302579..1302758) 1 NC_006155.1 similar to Yersinia pestis YPO2591 hypothetical protein (75% evalue=1.E-16); hypothetical protein 1302758 2953463 YPTB1084 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069622.1 1302579 R 273123 CDS YP_069623.1 51595432 2953464 complement(1302940..1303905) 1 NC_006155.1 similar to Yersinia pestis YPO4045 membrane protein (24% evalue=2.E-08); hypothetical protein 1303905 2953464 YPTB1085 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069623.1 1302940 R 273123 CDS YP_069624.1 51595433 2953465 1304328..1304945 1 NC_006155.1 similar to Yersinia pestis YPO2593 LuxR-family regulatory proteins (100% evalue=1.E-111); LuxR family transcriptional regulator 1304945 2953465 YPTB1086 Yersinia pseudotuberculosis IP 32953 LuxR family transcriptional regulator YP_069624.1 1304328 D 273123 CDS YP_069625.1 51595434 2953466 complement(1305225..1305716) 1 NC_006155.1 similar to Yersinia pestis YPO2594 hypothetical protein (99.1% evalue=5.E-62); hypothetical protein 1305716 2953466 YPTB1087 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069625.1 1305225 R 273123 CDS YP_069626.1 51595435 2955374 1305983..1306192 1 NC_006155.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 1306192 cspE 2955374 cspE Yersinia pseudotuberculosis IP 32953 cold shock protein CspE YP_069626.1 1305983 D 273123 CDS YP_069627.1 51595436 2955356 complement(1306615..1306998) 1 NC_006155.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1306998 ccrB 2955356 ccrB Yersinia pseudotuberculosis IP 32953 camphor resistance protein CrcB YP_069627.1 1306615 R 273123 CDS YP_069628.1 51595437 2956665 1307565..1307822 1 NC_006155.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 1307822 tatE 2956665 tatE Yersinia pseudotuberculosis IP 32953 twin-arginine translocation protein TatA YP_069628.1 1307565 D 273123 CDS YP_069629.1 51595438 2955949 complement(1308003..1308968) 1 NC_006155.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1308968 lipA 2955949 lipA Yersinia pseudotuberculosis IP 32953 lipoyl synthase YP_069629.1 1308003 R 273123 CDS YP_069630.2 161760583 2955950 complement(1309161..1309850) 1 NC_006155.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1309850 lipB 2955950 lipB Yersinia pseudotuberculosis IP 32953 lipoate-protein ligase B YP_069630.2 1309161 R 273123 CDS YP_069631.1 51595440 2953467 complement(1310074..1310337) 1 NC_006155.1 similar to Yersinia pestis YPO2600 conserved hypothetical protein (100% evalue=2.E-44); Salmonella typhimurium STM0636 ybeD; cytoplasmic protein (83.9% evalue=7.E-37); hypothetical protein 1310337 2953467 YPTB1093 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069631.1 1310074 R 273123 CDS YP_069632.1 51595441 2955419 complement(1310535..1311737) 1 NC_006155.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase 1311737 dacA 2955419 dacA Yersinia pseudotuberculosis IP 32953 D-alanyl-D-alanine carboxypeptidase YP_069632.1 1310535 R 273123 CDS YP_069633.1 51595442 2956460 complement(1312140..1313222) 1 NC_006155.1 similar to Yersinia pestis YPO2602 rlpA; rare lipoprotein A precursor (100% evalue=0); Salmonella typhimurium STM0638 rlpA; a minor lipoprotein (55% evalue=1.E-100); rare lipoprotein A 1313222 rlpA 2956460 rlpA Yersinia pseudotuberculosis IP 32953 rare lipoprotein A YP_069633.1 1312140 R 273123 CDS YP_069634.1 51595443 2956478 complement(1313232..1314344) 1 NC_006155.1 similar to Yersinia pestis YPO2603 rodA, mrdB; rod shape-determining protein (100% evalue=0); Escherichia coli Z0780 mrdB; rod shape-determining membrane protein (85.9% evalue=0); cell wall shape-determining protein 1314344 rodA 2956478 rodA Yersinia pseudotuberculosis IP 32953 cell wall shape-determining protein YP_069634.1 1313232 R 273123 CDS YP_069635.1 51595444 2956214 complement(1314530..1316425) 1 NC_006155.1 similar to Yersinia pestis YPO2604 pbpA, mrdA; penicillin-binding protein 2 (99.5% evalue=0); Salmonella typhimurium STM0640 mrdA; cell elongation specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) (80.7% evalue=0); penicillin-binding protein 2 1316425 pbpA 2956214 pbpA Yersinia pseudotuberculosis IP 32953 penicillin-binding protein 2 YP_069635.1 1314530 R 273123 CDS YP_069636.1 51595445 2953468 complement(1316507..1316977) 1 NC_006155.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1316977 2953468 YPTB1098 Yersinia pseudotuberculosis IP 32953 rRNA large subunit methyltransferase YP_069636.1 1316507 R 273123 CDS YP_069637.1 51595446 2953469 complement(1316981..1317298) 1 NC_006155.1 similar to Yersinia pestis YPO2606 conserved hypothetical protein (99% evalue=4.E-54); Salmonella typhimurium STM0642 ybeB; ACR, homolog of plant Iojap protein (84.7% evalue=2.E-48); hypothetical protein 1317298 2953469 YPTB1099 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069637.1 1316981 R 273123 CDS YP_069638.1 51595447 2956116 complement(1317521..1318183) 1 NC_006155.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1318183 nadD 2956116 nadD Yersinia pseudotuberculosis IP 32953 nicotinic acid mononucleotide adenylyltransferase YP_069638.1 1317521 R 273123 CDS YP_069639.1 51595448 2955818 complement(1318173..1319207) 1 NC_006155.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1319207 holA 2955818 holA Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit delta YP_069639.1 1318173 R 273123 CDS YP_069640.1 51595449 2956461 complement(1319204..1319827) 1 NC_006155.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 1319827 rlpB 2956461 rlpB Yersinia pseudotuberculosis IP 32953 LPS-assembly lipoprotein RlpB YP_069640.1 1319204 R 273123 CDS YP_069641.1 51595450 2955944 complement(1319842..1322424) 1 NC_006155.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1322424 leuS 2955944 leuS Yersinia pseudotuberculosis IP 32953 leucyl-tRNA synthetase YP_069641.1 1319842 R 273123 CDS YP_069642.1 51595451 2953470 1322686..1323168 1 NC_006155.1 similar to Yersinia pestis YPO2611 conserved hypothetical protein (100% evalue=1.E-90); Salmonella typhi STY0704 ybeL; conserved hypothetical protein (79.3% evalue=2.E-72); hypothetical protein 1323168 2953470 YPTB1104 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069642.1 1322686 D 273123 CDS YP_069643.1 51595452 2955721 complement(1323302..1324027) 1 NC_006155.1 similar to Yersinia pestis YPO2612 gltL; glutamate/aspartate transport ATP-binding protein (100% evalue=1.E-133); Salmonella typhi STY0707 gltL; glutamate/aspartate transport ATP-binding protein GltL (87.9% evalue=1.E-118); glutamate/aspartate ABC transporter ATP-binding protein gltL 1324027 gltL 2955721 gltL Yersinia pseudotuberculosis IP 32953 glutamate/aspartate ABC transporter ATP-binding protein gltL YP_069643.1 1323302 R 273123 CDS YP_069644.1 51595453 2955720 complement(1324027..1324701) 1 NC_006155.1 similar to Yersinia pestis YPO2613 gltK; glutamate/aspartate transport system permease (100% evalue=1.E-119); Salmonella typhi STY0708 gltK; glutamate/aspartate transport system permease GltK (87.5% evalue=1.E-107); glutamate/aspartate ABC transporter permease gltK 1324701 gltK 2955720 gltK Yersinia pseudotuberculosis IP 32953 glutamate/aspartate ABC transporter permease gltK YP_069644.1 1324027 R 273123 CDS YP_069645.1 51595454 2955719 complement(1324701..1325441) 1 NC_006155.1 similar to Yersinia pestis YPO2614 gltJ; glutamate/aspartate transport system permease (99.5% evalue=1.E-138); Salmonella typhi STY0709 gltJ; glutamate/aspartate transport system permease GltJ (86.9% evalue=1.E-122); glutamate/aspartate ABC transporter permease gltJ 1325441 gltJ 2955719 gltJ Yersinia pseudotuberculosis IP 32953 glutamate/aspartate ABC transporter permease gltJ YP_069645.1 1324701 R 273123 CDS YP_069646.1 51595455 2956964 complement(1325615..1326532) 1 NC_006155.1 similar to Yersinia pestis YPO2615 glnH; amino acid-binding protein precursor (100% evalue=1.E-170); Salmonella typhimurium STM0665 gltI; ABC superfamily (bind_prot), glutamate/aspartate transporter (79.6% evalue=1.E-137); glutamate and aspartate transporter subunit 1326532 ybeJ 2956964 ybeJ Yersinia pseudotuberculosis IP 32953 glutamate and aspartate transporter subunit YP_069646.1 1325615 R 273123 CDS YP_069647.1 51595456 2955380 complement(1327281..1328828) 1 NC_006155.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1328828 lnt 2955380 lnt Yersinia pseudotuberculosis IP 32953 apolipoprotein N-acyltransferase YP_069647.1 1327281 R 273123 CDS YP_069648.1 51595457 2955351 complement(1328836..1329714) 1 NC_006155.1 similar to Yersinia pestis YPO2617 ybeX; membrane protein (100% evalue=1.E-165); Escherichia coli JW0655 ybeX; Hypothteical protein (86.6% evalue=1.E-144); magnesium/cobalt efflux protein CorC 1329714 CorC 2955351 CorC Yersinia pseudotuberculosis IP 32953 magnesium/cobalt efflux protein CorC YP_069648.1 1328836 R 273123 CDS YP_069649.1 51595458 2953471 complement(1329832..1330305) 1 NC_006155.1 similar to Yersinia pestis YPO2618 conserved hypothetical protein (98.7% evalue=7.E-87); Salmonella typhi STY0714 conserved hypothetical protein (79.8% evalue=2.E-67); metalloprotease 1330305 2953471 YPTB1111 Yersinia pseudotuberculosis IP 32953 metalloprotease YP_069649.1 1329832 R 273123 CDS YP_069650.1 51595459 2953472 complement(1330302..1331414) 1 NC_006155.1 similar to Yersinia pestis YPO2619 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0698 ATP-binding protein in pho regulon (87.2% evalue=1.E-172); hypothetical protein 1331414 2953472 YPTB1112 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069650.1 1330302 R 273123 CDS YP_069651.1 51595460 2956042 complement(1331702..1333126) 1 NC_006155.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1333126 miaB 2956042 miaB Yersinia pseudotuberculosis IP 32953 (dimethylallyl)adenosine tRNA methylthiotransferase YP_069651.1 1331702 R 273123 CDS YP_069652.1 51595461 2956853 1333368..1334549 1 NC_006155.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1334549 ubiF 2956853 ubiF Yersinia pseudotuberculosis IP 32953 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_069652.1 1333368 D 273123 CDS YP_069653.1 51595462 2955243 complement(1336039..1337703) 1 NC_006155.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 1337703 asnB 2955243 asnB Yersinia pseudotuberculosis IP 32953 asparagine synthetase B YP_069653.1 1336039 R 273123 CDS YP_069654.1 51595463 2956122 complement(1338058..1338810) 1 NC_006155.1 similar to Yersinia pestis YPO2624 nagD; N-acetylglucosamine metabolism protein (100% evalue=1.E-142); Escherichia coli Z0822 nagD; N-acetylglucosamine metabolism (86% evalue=1.E-126); UMP phosphatase 1338810 nagD 2956122 nagD Yersinia pseudotuberculosis IP 32953 UMP phosphatase YP_069654.1 1338058 R 273123 CDS YP_069655.1 51595464 2956121 complement(1338883..1340109) 1 NC_006155.1 similar to Yersinia pestis YPO2625 nagC, nagR; N-acetylglucosamine regulatory protein (99.7% evalue=0); Salmonella typhi STY0720 nagC; N-acetylglucosamine repressor (77.3% evalue=0); N-acetylglucosamine regulatory protein 1340109 nagC 2956121 nagC Yersinia pseudotuberculosis IP 32953 N-acetylglucosamine regulatory protein YP_069655.1 1338883 R 273123 CDS YP_069656.1 51595465 2956119 complement(1340126..1341271) 1 NC_006155.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 1341271 nagA 2956119 nagA Yersinia pseudotuberculosis IP 32953 N-acetylglucosamine-6-phosphate deacetylase YP_069656.1 1340126 R 273123 CDS YP_069657.1 51595466 2956120 complement(1341291..1342091) 1 NC_006155.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 1342091 nagB 2956120 nagB Yersinia pseudotuberculosis IP 32953 glucosamine-6-phosphate deaminase YP_069657.1 1341291 R 273123 CDS YP_069658.1 51595467 2956123 1342490..1344523 1 NC_006155.1 similar to Yersinia pestis YPO2628 nagE, pstN; pts system, N-acetylglucosamine-specific IIABC component (99.8% evalue=0); Pasteurella multocida PM0876 PTS system, N-acetylglucosamine-specific II component (65.9% evalue=0); PTS system N-acetylglucosamine-specific transporter subunit IIABC 1344523 nagE 2956123 nagE Yersinia pseudotuberculosis IP 32953 PTS system N-acetylglucosamine-specific transporter subunit IIABC YP_069658.1 1342490 D 273123 CDS YP_069659.1 51595468 2955703 1344738..1346405 1 NC_006155.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1346405 glnS 2955703 glnS Yersinia pseudotuberculosis IP 32953 glutaminyl-tRNA synthetase YP_069659.1 1344738 D 273123 CDS YP_069660.1 51595469 2953473 1347111..1348532 1 NC_006155.1 similar to Yersinia pestis YPO2631 ybfM; exported protein (99.3% evalue=0); Escherichia coli JW0667 ybfM; Hypothteical protein (68.5% evalue=0); outermembrane porin 1348532 2953473 YPTB1122 Yersinia pseudotuberculosis IP 32953 outermembrane porin YP_069660.1 1347111 D 273123 CDS YP_069661.1 51595470 2953474 1348860..1351535 1 NC_006155.1 similar to Vibrio cholerae VC2217 beta-N-acetylhexosaminidase (57.2% evalue=0); Caulobacter crescentus CC0447 beta-N-acetylhexosaminidase, (25.7% evalue=2.E-39); beta-N-acetylhexosaminidase 1351535 2953474 YPTB1123 Yersinia pseudotuberculosis IP 32953 beta-N-acetylhexosaminidase YP_069661.1 1348860 D 273123 CDS YP_069662.1 51595471 2955666 complement(1351976..1352422) 1 NC_006155.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 1352422 fur 2955666 fur Yersinia pseudotuberculosis IP 32953 ferric uptake regulator YP_069662.1 1351976 R 273123 CDS YP_069663.1 51595472 2955555 complement(1352789..1353316) 1 NC_006155.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1353316 fldA 2955555 fldA Yersinia pseudotuberculosis IP 32953 flavodoxin FldA YP_069663.1 1352789 R 273123 CDS YP_069664.1 51595473 2953475 complement(1353389..1353637) 1 NC_006155.1 hypothetical protein 1353637 2953475 YPTB1126 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069664.1 1353389 R 273123 CDS YP_069665.1 51595474 2953476 complement(1353753..1354040) 1 NC_006155.1 similar to Yersinia pestis YPO2637 conserved hypothetical protein (100% evalue=9.E-48); Escherichia coli b0685 ybfE; hypothetical 13.9 kD protein in fldA-seqA intergenic region (86.5% evalue=5.E-38); LexA regulated protein 1354040 2953476 YPTB1127 Yersinia pseudotuberculosis IP 32953 LexA regulated protein YP_069665.1 1353753 R 273123 CDS YP_069666.1 51595475 2953477 complement(1354372..1355139) 1 NC_006155.1 similar to Yersinia pestis YPO2638 conserved hypothetical protein (99.2% evalue=1.E-144); Escherichia coli b0686 ybfF; esterase/lipase ybff (66.4% evalue=1.E-97); hypothetical protein 1355139 2953477 YPTB1128 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069666.1 1354372 R 273123 CDS YP_069667.1 51595476 2956824 complement(1356532..1356795) 1 NC_006155.1 similar to Yersinia pestis YPO2640 trp1400A; IS1400 transposase A (100% evalue=8.E-44); Salmonella typhimurium STM2765 transposase (70.9% evalue=7.E-30); IS1400 transposase 1356795 trp1400A 2956824 trp1400A Yersinia pseudotuberculosis IP 32953 IS1400 transposase YP_069667.1 1356532 R 273123 CDS YP_069668.1 51595477 2953479 1357127..1358149 1 NC_006155.1 similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 1358149 2953479 YPTB1132 Yersinia pseudotuberculosis IP 32953 transposase YP_069668.1 1357127 D 273123 CDS YP_069669.1 51595478 2953480 1358149..1358928 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 1358928 2953480 YPTB1133 Yersinia pseudotuberculosis IP 32953 transposase/IS protein YP_069669.1 1358149 D 273123 CDS YP_069670.1 51595479 2956616 complement(1359940..1360422) 1 NC_006155.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1360422 smpB 2956616 smpB Yersinia pseudotuberculosis IP 32953 SsrA-binding protein YP_069670.1 1359940 R 273123 CDS YP_069671.1 51595480 2953482 1360583..1361017 1 NC_006155.1 similar to Yersinia pestis YPO1102 conserved hypothetical protein (100% evalue=3.E-78); Escherichia coli Z3912 hypothetical protein (79.1% evalue=2.E-63); hypothetical protein 1361017 2953482 YPTB1136 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069671.1 1360583 D 273123 CDS YP_069672.1 51595481 2953483 1361010..1361294 1 NC_006155.1 similar to Yersinia pestis YPO1103 conserved hypothetical protein (98.9% evalue=3.E-46); Escherichia coli b2618 hypothetical protein (76.4% evalue=3.E-32); hypothetical protein 1361294 2953483 YPTB1137 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069672.1 1361010 D 273123 CDS YP_069673.2 229310104 2953484 complement(1361444..1361785) 1 NC_006155.1 similar to Yersinia pestis YPO1104 conserved hypothetical protein (100% evalue=4.E-61); Salmonella typhimurium STM2685 smpA; small membrane protein A (80.1% evalue=1.E-48); hypothetical protein 1361785 2953484 YPTB1138 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069673.2 1361444 R 273123 CDS YP_069674.1 51595483 2956419 complement(1361899..1363578) 1 NC_006155.1 similar to Yersinia pestis YPO1105 DNA repair protein RecN (99.8% evalue=0); Escherichia coli JW2597 recN; DNA repair protein RecN (recombination protein n) (74.5% evalue=0); recombination and repair protein 1363578 RecN 2956419 RecN Yersinia pseudotuberculosis IP 32953 recombination and repair protein YP_069674.1 1361899 R 273123 CDS YP_069675.1 51595484 2953485 complement(1363647..1364528) 1 NC_006155.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1364528 ppnK 2953485 ppnK Yersinia pseudotuberculosis IP 32953 inorganic polyphosphate/ATP-NAD kinase YP_069675.1 1363647 R 273123 CDS YP_069676.1 51595485 2955747 1364652..1365230 1 NC_006155.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1365230 GrpE 2955747 GrpE Yersinia pseudotuberculosis IP 32953 heat shock protein GrpE YP_069676.1 1364652 D 273123 CDS YP_069677.1 51595486 2955716 complement(1365338..1366618) 1 NC_006155.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1366618 gltA 2955716 gltA Yersinia pseudotuberculosis IP 32953 type II citrate synthase YP_069677.1 1365338 R 273123 CDS YP_069678.1 51595487 2956579 1367328..1367717 1 NC_006155.1 similar to Yersinia pestis YPO1109 sdhC, cybA; succinate dehydrogenase cytochrome b-556 subunit (99.2% evalue=3.E-67); Escherichia coli b0721 sdhC, cybA; succinate dehydrogenase cytochrome b-556 subunit (77.1% evalue=2.E-51); succinate dehydrogenase cytochrome b556 large membrane subunit 1367717 sdhC 2956579 sdhC Yersinia pseudotuberculosis IP 32953 succinate dehydrogenase cytochrome b556 large membrane subunit YP_069678.1 1367328 D 273123 CDS YP_069679.1 51595488 2956580 1367711..1368058 1 NC_006155.1 similar to Yersinia pestis YPO1110 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein (100% evalue=2.E-60); Escherichia coli b0722 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein (69.2% evalue=3.E-44); succinate dehydrogenase cytochrome b556 small membrane subunit 1368058 sdhD 2956580 sdhD Yersinia pseudotuberculosis IP 32953 succinate dehydrogenase cytochrome b556 small membrane subunit YP_069679.1 1367711 D 273123 CDS YP_069680.1 51595489 2956577 1368059..1369825 1 NC_006155.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1369825 sdhA 2956577 sdhA Yersinia pseudotuberculosis IP 32953 succinate dehydrogenase flavoprotein subunit YP_069680.1 1368059 D 273123 CDS YP_069681.1 51595490 2956578 1369875..1370591 1 NC_006155.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1370591 sdhB 2956578 sdhB Yersinia pseudotuberculosis IP 32953 succinate dehydrogenase iron-sulfur subunit YP_069681.1 1369875 D 273123 CDS YP_069682.1 51595491 2956645 1370947..1373754 1 NC_006155.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 1373754 sucA 2956645 sucA Yersinia pseudotuberculosis IP 32953 2-oxoglutarate dehydrogenase E1 YP_069682.1 1370947 D 273123 CDS YP_069683.1 51595492 2956646 1373784..1375007 1 NC_006155.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1375007 sucB 2956646 sucB Yersinia pseudotuberculosis IP 32953 dihydrolipoamide succinyltransferase YP_069683.1 1373784 D 273123 CDS YP_069684.1 51595493 2956647 1375120..1376286 1 NC_006155.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1376286 sucC 2956647 sucC Yersinia pseudotuberculosis IP 32953 succinyl-CoA synthetase subunit beta YP_069684.1 1375120 D 273123 CDS YP_069685.1 51595494 2956648 1376286..1377158 1 NC_006155.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1377158 sucD 2956648 sucD Yersinia pseudotuberculosis IP 32953 succinyl-CoA synthetase subunit alpha YP_069685.1 1376286 D 273123 CDS YP_069686.1 51595495 2955389 1377926..1379494 1 NC_006155.1 similar to Yersinia pestis YPO1117 cydA; cytochrome D ubiquinol oxidase subunit I (100% evalue=0); Escherichia coli ECs0768 cytochrome bd-I oxidase subunit I (86.5% evalue=0); cytochrome D ubiquinol oxidase subunit I 1379494 cydA 2955389 cydA Yersinia pseudotuberculosis IP 32953 cytochrome D ubiquinol oxidase subunit I YP_069686.1 1377926 D 273123 CDS YP_069687.1 51595496 2955390 1379509..1380648 1 NC_006155.1 similar to Yersinia pestis YPO1118 cydB; cytochrome D ubiquinol oxidase subunit II (100% evalue=0); Salmonella typhi STY0787 cydB; cytochrome d ubiquinol oxidase subunit II (79.4% evalue=0); cytochrome D ubiquinol oxidase subunit II 1380648 cydB 2955390 cydB Yersinia pseudotuberculosis IP 32953 cytochrome D ubiquinol oxidase subunit II YP_069687.1 1379509 D 273123 CDS YP_069688.1 51595497 2953486 1380661..1380795 1 NC_006155.1 similar to Salmonella typhi STY0788 membrane protein (89.6% evalue=1.E-08); Escherichia coli JW0724 ybgT, ybgE; Hypothetical protein (ORFC) (76.4% evalue=4.E-09); hypothetical protein 1380795 2953486 YPTB1153 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069688.1 1380661 D 273123 CDS YP_069689.1 51595498 2953487 1380785..1381072 1 NC_006155.1 similar to Yersinia pestis YPO1119 conserved hypothetical protein (100% evalue=1.E-50); Escherichia coli ECs0770 hypothetical protein (59.5% evalue=4.E-27); hypothetical protein 1381072 2953487 YPTB1154 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069689.1 1380785 D 273123 CDS YP_069690.1 51595499 2953488 1381204..1381605 1 NC_006155.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase 1381605 2953488 YPTB1155 Yersinia pseudotuberculosis IP 32953 acyl-CoA thioester hydrolase YP_069690.1 1381204 D 273123 CDS YP_069691.1 51595500 2956721 1381605..1382291 1 NC_006155.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1382291 tolQ 2956721 tolQ Yersinia pseudotuberculosis IP 32953 colicin uptake protein TolQ YP_069691.1 1381605 D 273123 CDS YP_069692.1 51595501 2956722 1382304..1382732 1 NC_006155.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1382732 tolR 2956722 tolR Yersinia pseudotuberculosis IP 32953 colicin uptake protein TolR YP_069692.1 1382304 D 273123 CDS YP_069693.1 51595502 2956719 1382844..1384010 1 NC_006155.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1384010 tolA 2956719 tolA Yersinia pseudotuberculosis IP 32953 cell envelope integrity inner membrane protein TolA YP_069693.1 1382844 D 273123 CDS YP_069694.1 51595503 2956720 1384130..1385422 1 NC_006155.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1385422 tolB 2956720 tolB Yersinia pseudotuberculosis IP 32953 translocation protein TolB YP_069694.1 1384130 D 273123 CDS YP_069695.1 51595504 2956206 1385473..1385979 1 NC_006155.1 similar to Yersinia pestis YPO1125 pal, excC; peptidoglycan-associated lipoprotein Pal (99.4% evalue=2.E-89); Escherichia coli JW0731 pal; Peptidoglycan-associated lipoprotein precursor (83.8% evalue=5.E-75); peptidoglycan-associated outer membrane lipoprotein 1385979 pal 2956206 pal Yersinia pseudotuberculosis IP 32953 peptidoglycan-associated outer membrane lipoprotein YP_069695.1 1385473 D 273123 CDS YP_069696.1 51595505 2953489 1385989..1386798 1 NC_006155.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 1386798 2953489 YPTB1161 Yersinia pseudotuberculosis IP 32953 tol-pal system protein YbgF YP_069696.1 1385989 D 273123 CDS YP_069697.1 51595506 2956113 1388174..1389235 1 NC_006155.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1389235 nadA 2956113 nadA Yersinia pseudotuberculosis IP 32953 quinolinate synthetase YP_069697.1 1388174 D 273123 CDS YP_069698.1 51595507 2956293 1389357..1390082 1 NC_006155.1 similar to Yersinia pestis YPO1128 pnuC; intergral membrane NMN transport protein PnuC (100% evalue=1.E-138); Salmonella typhimurium STM0757 pnuC; NMN family, nucleoside/purine/pyrimidine transporter (77.3% evalue=1.E-104); intergral membrane NMN transport protein PnuC 1390082 pnuC 2956293 pnuC Yersinia pseudotuberculosis IP 32953 intergral membrane NMN transport protein PnuC YP_069698.1 1389357 D 273123 CDS YP_069699.1 51595508 2953490 complement(1390197..1391135) 1 NC_006155.1 involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 1391135 2953490 YPTB1164 Yersinia pseudotuberculosis IP 32953 zinc transporter ZitB YP_069699.1 1390197 R 273123 CDS YP_069700.1 51595509 2955226 1391602..1392654 1 NC_006155.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1392654 aroG 2955226 aroG Yersinia pseudotuberculosis IP 32953 phospho-2-dehydro-3-deoxyheptonate aldolase YP_069700.1 1391602 D 273123 CDS YP_069701.1 51595510 2955739 complement(1392836..1393588) 1 NC_006155.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1393588 gpmA 2955739 gpmA Yersinia pseudotuberculosis IP 32953 phosphoglyceromutase YP_069701.1 1392836 R 273123 CDS YP_069702.1 51595511 2956339 complement(1393935..1394270) 1 NC_006155.1 similar to Yersinia pestis YPO1134 psiF; starvation-inducible protein (99% evalue=2.E-58); Salmonella typhimurium STM0384 psiF; induced by phosphate starvation (53.5% evalue=9.E-26); starvation-inducible protein 1394270 psiF 2956339 psiF Yersinia pseudotuberculosis IP 32953 starvation-inducible protein YP_069702.1 1393935 R 273123 CDS YP_069703.1 51595512 2955672 complement(1394563..1395633) 1 NC_006155.1 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 1395633 galM 2955672 galM Yersinia pseudotuberculosis IP 32953 aldose 1-epimerase YP_069703.1 1394563 R 273123 CDS YP_069704.1 51595513 2955671 complement(1395627..1396778) 1 NC_006155.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 1396778 galK 2955671 galK Yersinia pseudotuberculosis IP 32953 galactokinase YP_069704.1 1395627 R 273123 CDS YP_069705.1 51595514 2955674 complement(1396775..1397827) 1 NC_006155.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1397827 galT 2955674 galT Yersinia pseudotuberculosis IP 32953 galactose-1-phosphate uridylyltransferase YP_069705.1 1396775 R 273123 CDS YP_069706.1 51595515 2955669 complement(1397837..1398853) 1 NC_006155.1 similar to Yersinia pestis YPO1139 galE, galD; UDP-glucose 4-epimerase (99.4% evalue=0); Escherichia coli b0759 galE, galD; UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) (76.3% evalue=1.E-151); UDP-galactose-4-epimerase 1398853 galE 2955669 galE Yersinia pseudotuberculosis IP 32953 UDP-galactose-4-epimerase YP_069706.1 1397837 R 273123 CDS YP_069707.1 51595516 2953491 complement(1399213..1400031) 1 NC_006155.1 similar to Yersinia pestis YPO1140 membrane protein (100% evalue=1.E-153); Pseudomonas aeruginosa PA5132 hypothetical protein (62.7% evalue=1.E-93); hypothetical protein 1400031 2953491 YPTB1172 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069707.1 1399213 R 273123 CDS YP_069708.1 51595517 2956064 complement(1400248..1401738) 1 NC_006155.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 1401738 modF 2956064 modF Yersinia pseudotuberculosis IP 32953 molybdenum transport ATP-binding protein ModF YP_069708.1 1400248 R 273123 CDS YP_069709.1 51595518 2956063 complement(1401848..1402639) 1 NC_006155.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 1402639 modE 2956063 modE Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator ModE YP_069709.1 1401848 R 273123 CDS YP_069710.1 51595519 2953492 1402871..1403023 1 NC_006155.1 hypothetical protein 1403023 2953492 YPTB1175 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069710.1 1402871 D 273123 CDS YP_069711.1 51595520 2956060 1403258..1404037 1 NC_006155.1 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1404037 modA 2956060 modA Yersinia pseudotuberculosis IP 32953 molybdate transporter periplasmic protein YP_069711.1 1403258 D 273123 CDS YP_069712.1 51595521 2956061 1404037..1404732 1 NC_006155.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1404732 modB 2956061 modB Yersinia pseudotuberculosis IP 32953 molybdate ABC transporter permease YP_069712.1 1404037 D 273123 CDS YP_069713.1 51595522 2956062 1404726..1405805 1 NC_006155.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1405805 modC 2956062 modC Yersinia pseudotuberculosis IP 32953 molybdate transporter ATP-binding protein YP_069713.1 1404726 D 273123 CDS YP_069714.1 51595523 2953493 complement(1405861..1406682) 1 NC_006155.1 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 1406682 2953493 YPTB1179 Yersinia pseudotuberculosis IP 32953 phosphotransferase YP_069714.1 1405861 R 273123 CDS YP_069715.1 51595524 2953494 1406973..1407977 1 NC_006155.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1407977 2953494 YPTB1180 Yersinia pseudotuberculosis IP 32953 6-phosphogluconolactonase YP_069715.1 1406973 D 273123 CDS YP_069716.1 51595525 2955285 complement(1408162..1409442) 1 NC_006155.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1409442 bioA 2955285 bioA Yersinia pseudotuberculosis IP 32953 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_069716.1 1408162 R 273123 CDS YP_069717.1 51595526 2955286 1409541..1410578 1 NC_006155.1 similar to Yersinia pestis YPO1151 bioB; biotin synthase (100% evalue=0); Escherichia coli JW0758 bioB; biotin synthetase (84.5% evalue=1.E-170); biotin synthase 1410578 bioB 2955286 bioB Yersinia pseudotuberculosis IP 32953 biotin synthase YP_069717.1 1409541 D 273123 CDS YP_069718.1 51595527 2955290 1410578..1411729 1 NC_006155.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1411729 bioF 2955290 bioF Yersinia pseudotuberculosis IP 32953 8-amino-7-oxononanoate synthase YP_069718.1 1410578 D 273123 CDS YP_069719.1 51595528 2955287 1411713..1412516 1 NC_006155.1 similar to Yersinia pestis YPO1153 bioC; biotin synthesis protein BioC (99.6% evalue=1.E-155); Salmonella typhimurium STM0796 bioC; biotin biosynthesis; reaction prior to pimeloyl CoA (50.4% evalue=3.E-61); biotin synthesis protein BioC 1412516 bioC 2955287 bioC Yersinia pseudotuberculosis IP 32953 biotin synthesis protein BioC YP_069719.1 1411713 D 273123 CDS YP_069720.1 51595529 2955288 1412509..1413231 1 NC_006155.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1413231 bioD 2955288 bioD Yersinia pseudotuberculosis IP 32953 dithiobiotin synthetase YP_069720.1 1412509 D 273123 CDS YP_069721.1 51595530 2953495 complement(1413459..1414169) 1 NC_006155.1 similar to Yersinia pestis YPO1155 amino acid transporter (100% evalue=1.E-135); Ralstonia solanacearum RS03602 probable ATP-binding ABC transporter protein (46.3% evalue=5.E-51); branched-chain amino acid ABC transporter ATP-binding protein 1414169 2953495 YPTB1186 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter ATP-binding protein YP_069721.1 1413459 R 273123 CDS YP_069722.1 51595531 2956882 1415260..1417275 1 NC_006155.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1417275 uvrB 2956882 uvrB Yersinia pseudotuberculosis IP 32953 excinuclease ABC subunit B YP_069722.1 1415260 D 273123 CDS YP_069723.1 51595532 2953496 1417586..1417831 1 NC_006155.1 similar to Yersinia pestis YPO1157 conserved hypothetical protein (100% evalue=5.E-42); Vibrio cholerae VC1816 hypothetical protein (70.4% evalue=4.E-21); hypothetical protein 1417831 2953496 YPTB1188 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069723.1 1417586 D 273123 CDS YP_069724.1 51595533 2953497 complement(1417962..1418885) 1 NC_006155.1 similar to Yersinia pestis YPO1158 conserved hypothetical protein (100% evalue=1.E-169); Salmonella typhimurium STM0801 ybhK; cytoplasmic protein (79.4% evalue=1.E-133); hypothetical protein 1418885 2953497 YPTB1189 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069724.1 1417962 R 273123 CDS YP_069725.1 51595534 2956054 1419417..1420397 1 NC_006155.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1420397 moaA 2956054 moaA Yersinia pseudotuberculosis IP 32953 molybdenum cofactor biosynthesis protein A YP_069725.1 1419417 D 273123 CDS YP_069726.1 51595535 2956055 1420620..1421099 1 NC_006155.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1421099 moaC 2956055 moaC Yersinia pseudotuberculosis IP 32953 molybdenum cofactor biosynthesis protein MoaC YP_069726.1 1420620 D 273123 CDS YP_069727.1 51595536 2956056 1421096..1421341 1 NC_006155.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 1421341 moaD 2956056 moaD Yersinia pseudotuberculosis IP 32953 molybdopterin synthase small subunit YP_069727.1 1421096 D 273123 CDS YP_069728.1 51595537 2956057 1421341..1421796 1 NC_006155.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 1421796 moaE 2956057 moaE Yersinia pseudotuberculosis IP 32953 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_069728.1 1421341 D 273123 CDS YP_069729.1 51595538 2953498 1421939..1422649 1 NC_006155.1 similar to Yersinia pestis YPO1163 membrane protein (99.5% evalue=1.E-129); Salmonella typhimurium STM0807 ybhL; permease (76.6% evalue=2.E-97); stationary phase anti-death family (SAD), acetate uptake 1422649 2953498 YPTB1194 Yersinia pseudotuberculosis IP 32953 stationary phase anti-death family (SAD), acetate uptake YP_069729.1 1421939 D 273123 CDS YP_069730.1 51595539 2955276 complement(1422860..1424563) 1 NC_006155.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1424563 betA 2955276 betA Yersinia pseudotuberculosis IP 32953 choline dehydrogenase YP_069730.1 1422860 R 273123 CDS YP_069731.1 51595540 2955277 complement(1424586..1426058) 1 NC_006155.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1426058 betB 2955277 betB Yersinia pseudotuberculosis IP 32953 betaine aldehyde dehydrogenase YP_069731.1 1424586 R 273123 CDS YP_069732.1 51595541 2955278 complement(1426116..1426712) 1 NC_006155.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1426712 betI 2955278 betI Yersinia pseudotuberculosis IP 32953 transcriptional regulator BetI YP_069732.1 1426116 R 273123 CDS YP_069733.1 51595542 2955279 1427078..1429126 1 NC_006155.1 proton-motive-force-driven choline transporter; choline transport protein BetT 1429126 betT 2955279 betT Yersinia pseudotuberculosis IP 32953 choline transport protein BetT YP_069733.1 1427078 D 273123 CDS YP_069734.1 51595543 2953499 1429367..1430260 1 NC_006155.1 similar to Yersinia pestis YPO1169 LysR-family regulatory protein (100% evalue=1.E-169); Salmonella typhi STY2655 xapR; xanthosine operon transcriptional regulator (39.3% evalue=2.E-52); DNA-binding transcriptional activator XapR 1430260 2953499 YPTB1199 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional activator XapR YP_069734.1 1429367 D 273123 CDS YP_069735.1 51595544 2953500 complement(1430298..1431179) 1 NC_006155.1 similar to Yersinia pestis YPO1170 membrane protein (98.9% evalue=1.E-159); Bacillus subtilis BG10039 yyaM; similar to unknown proteins (20.1% evalue=4.E-19); DMT superfamily drug/metabolite efflux pump 1431179 2953500 YPTB1200 Yersinia pseudotuberculosis IP 32953 DMT superfamily drug/metabolite efflux pump YP_069735.1 1430298 R 273123 CDS YP_069736.1 51595545 2956904 1431492..1432355 1 NC_006155.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 1432355 xapA 2956904 xapA Yersinia pseudotuberculosis IP 32953 purine nucleoside phosphorylase YP_069736.1 1431492 D 273123 CDS YP_069737.1 51595546 2956905 1432494..1433750 1 NC_006155.1 similar to Escherichia coli b2406 xapB; xanthosine permease (xanthosine transporter) (65.5% evalue=1.E-163); Escherichia coli JW2397 xapB; Xanthosine permease (xanthosine transporter) (65.5% evalue=1.E-163); major facilitator superfamily xanthosine permease 1433750 xapB 2956905 xapB Yersinia pseudotuberculosis IP 32953 major facilitator superfamily xanthosine permease YP_069737.1 1432494 D 273123 CDS YP_069738.1 51595547 2953501 complement(1433838..1434311) 1 NC_006155.1 similar to Salmonella typhi STY3713 possible exported protein (36% evalue=2.E-17); Salmonella typhimurium STM4172 zraP; zinc-resistance associated protein (36% evalue=2.E-17); zinc resistance protein 1434311 zraP 2953501 zraP Yersinia pseudotuberculosis IP 32953 zinc resistance protein YP_069738.1 1433838 R 273123 CDS YP_069739.1 51595548 2953502 1434661..1436475 1 NC_006155.1 similar to Salmonella typhi STY3712 hydH; two-component system sensor protein (56.4% evalue=4.E-70); two component histidine kinase-sensor 1436475 2953502 YPTB1204 Yersinia pseudotuberculosis IP 32953 two component histidine kinase-sensor YP_069739.1 1434661 D 273123 CDS YP_069740.1 51595549 2955857 1436462..1437826 1 NC_006155.1 similar to Escherichia coli b4004 hydG; transcriptional regulatory protein hydG (63.9% evalue=1.E-160); Escherichia coli JW3968 hydG; Transcriptional regulatory protein HydG. (63.9% evalue=1.E-160); transcriptional regulator hydG 1437826 hydG 2955857 hydG Yersinia pseudotuberculosis IP 32953 transcriptional regulator hydG YP_069740.1 1436462 D 273123 CDS YP_069741.1 51595550 2956067 1438174..1439283 1 NC_006155.1 similar to Ralstonia solanacearum RS02674 probable flavoprotein NADH-dependent oxidoreductase (51.2% evalue=5.E-96); Pseudomonas aeruginosa PA2932 morB; morphinone reductase (50.2% evalue=2.E-96); morphinone reductase 1439283 morB 2956067 morB Yersinia pseudotuberculosis IP 32953 morphinone reductase YP_069741.1 1438174 D 273123 CDS YP_069742.1 51595551 2953503 complement(1439284..1440195) 1 NC_006155.1 similar to Sinorhizobium meliloti SMc01817 transcription regulator protein (42.7% evalue=3.E-60); Mesorhizobium loti mlr2579 probable transcriptional regulator (46.2% evalue=4.E-65); LysR family transcriptional regulator 1440195 2953503 YPTB1207 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_069742.1 1439284 R 273123 CDS YP_069743.1 51595552 2953504 1440765..1441091 1 NC_006155.1 hypothetical protein 1441091 2953504 YPTB1208 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069743.1 1440765 D 273123 CDS YP_069744.1 51595553 2953505 complement(1441130..1442236) 1 NC_006155.1 similar to Escherichia coli ECs0870 hypothetical protein (85.5% evalue=1.E-178); Escherichia coli b0792 ybhR; ABC-2 type transport system permease (85.5% evalue=1.E-178); multidrug ABC transporter permease 1442236 2953505 YPTB1209 Yersinia pseudotuberculosis IP 32953 multidrug ABC transporter permease YP_069744.1 1441130 R 273123 CDS YP_069745.1 51595554 2953506 complement(1442249..1443424) 1 NC_006155.1 similar to Salmonella typhi STY0851 inner membrane protein (79.5% evalue=1.E-164); Salmonella typhimurium STM0816 ybhS; ABC superfamily (membrane) transport protein (79.5% evalue=1.E-164); multidrug ABC transporter permease 1443424 2953506 YPTB1210 Yersinia pseudotuberculosis IP 32953 multidrug ABC transporter permease YP_069745.1 1442249 R 273123 CDS YP_069746.1 51595555 2953507 complement(1443429..1445171) 1 NC_006155.1 similar to Escherichia coli b0794 ybhF; ABC-2 type transport system ATP-binding protein (74.5% evalue=0); Escherichia coli JW0778 yhiG; Hypothetical ABC transporter ATP-binding protein (74.5% evalue=0); ABC transporter ATPase 1445171 2953507 YPTB1211 Yersinia pseudotuberculosis IP 32953 ABC transporter ATPase YP_069746.1 1443429 R 273123 CDS YP_069747.1 51595556 2953508 complement(1445185..1446171) 1 NC_006155.1 similar to Salmonella typhi STY0853 HlyD-family secretion protein (66.5% evalue=1.E-122); Escherichia coli ECs0873 membrane protein (66.7% evalue=1.E-121); hypothetical protein 1446171 2953508 YPTB1212 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069747.1 1445185 R 273123 CDS YP_069748.1 51595557 2953509 complement(1446223..1446933) 1 NC_006155.1 similar to Escherichia coli b0796 ybiH; hypothetical transcriptional regulator in moaE-rhlE intergenic region (52.5% evalue=1.E-56); Escherichia coli Z1016 ybiH; transcriptional regulator (52.5% evalue=1.E-56); DNA-binding transcriptional regulator 1446933 2953509 YPTB1213 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_069748.1 1446223 R 273123 CDS YP_069749.1 51595558 2956446 1447324..1448679 1 NC_006155.1 this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 1448679 rhlE 2956446 rhlE Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase RhlE YP_069749.1 1447324 D 273123 CDS YP_069750.1 51595559 2953510 1449052..1449981 1 NC_006155.1 similar to Yersinia pestis YPO1174 hypothetical protein (92.1% evalue=1.E-122); hypothetical protein 1449981 2953510 YPTB1215 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069750.1 1449052 D 273123 CDS YP_069751.1 51595560 2953511 1450275..1451219 1 NC_006155.1 similar to Yersinia pestis YPO1175 conserved hypothetical protein (100% evalue=1.E-179); Escherichia coli ECs3026 regulator protein (83.6% evalue=1.E-153); tRNA-dihydrouridine synthase C 1451219 2953511 YPTB1216 Yersinia pseudotuberculosis IP 32953 tRNA-dihydrouridine synthase C YP_069751.1 1450275 D 273123 CDS YP_069752.1 51595561 2956215 1451812..1452747 1 NC_006155.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 1452747 pbpG 2956215 pbpG Yersinia pseudotuberculosis IP 32953 D-alanyl-D-alanine endopeptidase YP_069752.1 1451812 D 273123 CDS YP_069753.1 51595562 2955463 complement(1452868..1454583) 1 NC_006155.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 1454583 dld 2955463 dld Yersinia pseudotuberculosis IP 32953 D-lactate dehydrogenase YP_069753.1 1452868 R 273123 CDS YP_069754.1 51595563 2955384 1454790..1455329 1 NC_006155.1 similar to Yersinia pestis YPO1178 cyaB; adenylate cyclase 2 (100% evalue=2.E-99); Methanocaldococcus jannaschii MJ0240 hypothetical protein MJ0240 (27.4% evalue=6.E-09); adenylate cyclase 1455329 cyaB 2955384 cyaB Yersinia pseudotuberculosis IP 32953 adenylate cyclase YP_069754.1 1454790 D 273123 CDS YP_069755.1 51595564 2953512 complement(1455355..1455696) 1 NC_006155.1 similar to Yersinia pestis YPO1179 conserved hypothetical protein (100% evalue=7.E-66); Salmonella typhi STY0449 yajD; conserved hypothetical protein (84% evalue=1.E-56); hypothetical protein 1455696 2953512 YPTB1220 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069755.1 1455355 R 273123 CDS YP_069756.1 51595565 2953513 1456009..1457112 1 NC_006155.1 similar to Yersinia pestis YPO1180 hypothetical protein (99.7% evalue=0); hypothetical protein 1457112 2953513 YPTB1221 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069756.1 1456009 D 273123 CDS YP_069757.1 51595566 2953514 1457297..1457545 1 NC_006155.1 similar to Yersinia pestis YPO1181 membrane protein (100% evalue=6.E-41); Escherichia coli JW1784 hypothetical protein (82.9% evalue=2.E-35); hypothetical protein 1457545 2953514 YPTB1222 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069757.1 1457297 D 273123 CDS YP_069758.1 51595567 2956251 1457753..1458589 1 NC_006155.1 similar to Yersinia pestis YPO1182 ABC transport ATP-binding subunit (100% evalue=1.E-156); Agrobacterium tumefaciens Atu0174 phnC; ABC transporter, nucleotide binding/ATPase [phosphonate] (47.8% evalue=1.E-57); ABC transport ATP-binding subunit, phnC 1458589 phnC 2956251 phnC Yersinia pseudotuberculosis IP 32953 ABC transport ATP-binding subunit, phnC YP_069758.1 1457753 D 273123 CDS YP_069759.1 51595568 2956252 1458626..1459555 1 NC_006155.1 similar to Yersinia pestis YPO1183 substrate-binding periplasmic transport protein (99.3% evalue=1.E-176); Sinorhizobium meliloti SMb21176 phoD; phosphate uptake ABC transporter periplasmic solute-binding protein precursor (39.2% evalue=2.E-51); periplasmic phosphonate binding protein phnD 1459555 phnD 2956252 phnD Yersinia pseudotuberculosis IP 32953 periplasmic phosphonate binding protein phnD YP_069759.1 1458626 D 273123 CDS YP_069760.1 51595569 2956253 1459719..1460519 1 NC_006155.1 similar to Yersinia pestis YPO1184 ABC transport membrane permease (99.6% evalue=1.E-147); Agrobacterium tumefaciens AGR_C_285 phoE; phosphate uptake ABC transporter permease (34.4% evalue=3.E-38); ABC transport permease subunit, phnE 1460519 phnE1 2956253 phnE1 Yersinia pseudotuberculosis IP 32953 ABC transport permease subunit, phnE YP_069760.1 1459719 D 273123 CDS YP_069761.1 51595570 2956254 1460516..1461403 1 NC_006155.1 similar to Yersinia pestis YPO1185 ABC transport membrane permease (100% evalue=1.E-166); Agrobacterium tumefaciens AGR_C_284 PhoT (43% evalue=1.E-41); ABC transport permease subunit, phnE 1461403 phnE2 2956254 phnE2 Yersinia pseudotuberculosis IP 32953 ABC transport permease subunit, phnE YP_069761.1 1460516 D 273123 CDS YP_069762.1 51595571 2953515 1461648..1462121 1 NC_006155.1 similar to Yersinia pestis YPO1186 conserved hypothetical protein (99.3% evalue=3.E-85); Pseudomonas aeruginosa PA0915 conserved hypothetical protein (55.5% evalue=5.E-44); hypothetical protein 1462121 2953515 YPTB1227 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069762.1 1461648 D 273123 CDS YP_069763.1 51595572 2953516 1462570..1463838 1 NC_006155.1 similar to Yersinia pestis YPO1187 substrate-binding periplasmic transport protein (100% evalue=0); Pseudomonas aeruginosa PA4858 conserved hypothetical protein (80.2% evalue=0); branched-chain amino acid ABC transporter substrate-binding protein 1463838 2953516 YPTB1228 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter substrate-binding protein YP_069763.1 1462570 D 273123 CDS YP_069764.1 51595573 2953517 1463962..1465563 1 NC_006155.1 similar to Yersinia pestis YPO1188 Branched-chain amino acid transport system, permease component (100% evalue=0); Pseudomonas aeruginosa PA4859 probable permease of ABC transporter (84.8% evalue=1.E-151); branched-chain amino acid ABC transporter permease 1465563 2953517 YPTB1229 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter permease YP_069764.1 1463962 D 273123 CDS YP_069765.1 51595574 2953518 1465563..1466639 1 NC_006155.1 similar to Yersinia pestis YPO1189 Branched-chain amino acid transport system, permease component (100% evalue=0); Pseudomonas aeruginosa PA4860 probable permease of ABC transporter (77.5% evalue=1.E-166); branched-chain amino acid ABC transporter permease 1466639 2953518 YPTB1230 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter permease YP_069765.1 1465563 D 273123 CDS YP_069766.1 51595575 2953519 1466636..1467472 1 NC_006155.1 similar to Yersinia pestis YPO1190 ABC transport ATP-binding subunit (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA4861 probable ATP-binding component of ABC transporter (76.4% evalue=1.E-100); branched-chain amino acid ABC transporter ATP-binding protein 1467472 2953519 YPTB1231 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter ATP-binding protein YP_069766.1 1466636 D 273123 CDS YP_069767.1 51595576 2953520 1467566..1468264 1 NC_006155.1 similar to Yersinia pestis YPO1191 ABC transport ATP-binding subunit (99.1% evalue=1.E-129); Pseudomonas aeruginosa PA4862 probable ATP-binding component of ABC transporter (77.1% evalue=1.E-100); branched-chain amino acid ABC transporter ATP-binding protein 1468264 2953520 YPTB1232 Yersinia pseudotuberculosis IP 32953 branched-chain amino acid ABC transporter ATP-binding protein YP_069767.1 1467566 D 273123 CDS YP_069768.1 51595577 2953521 1468379..1469236 1 NC_006155.1 similar to Yersinia pestis YPO1192 conserved hypothetical protein (98.2% evalue=1.E-164); B. halodurans BH2933 unknown (24.7% evalue=1.E-10); hypothetical protein 1469236 2953521 YPTB1233 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069768.1 1468379 D 273123 CDS YP_069769.1 51595578 2953522 1469260..1470675 1 NC_006155.1 similar to Yersinia pestis YPO1193 pyridoxal-dependent decarboxylase (99.7% evalue=0); A. thalianan At2g20340 F11A3.11; tyrosine decarboxylase (38.3% evalue=2.E-92); pyridoxal-dependent decarboxylase 1470675 2953522 YPTB1234 Yersinia pseudotuberculosis IP 32953 pyridoxal-dependent decarboxylase YP_069769.1 1469260 D 273123 CDS YP_069770.1 51595579 2953523 complement(1470886..1471740) 1 NC_006155.1 similar to Yersinia pestis YPO1194 sulfurtransferase (99.6% evalue=1.E-163); Escherichia coli JW2505 sseA; thiosulfate sulfurtransferase (rhodanese-like protein). (50.5% evalue=1.E-79); sulfurtransferase 1471740 2953523 YPTB1235 Yersinia pseudotuberculosis IP 32953 sulfurtransferase YP_069770.1 1470886 R 273123 CDS YP_069771.1 51595580 2953524 1472476..1473408 1 NC_006155.1 similar to Salmonella typhi STY2395 yehZ; periplasmic protein (71.1% evalue=1.E-120); Salmonella typhimurium STM2165 yehZ; ABC superfamily transport protein (possibly glycine betaine choline transport for osmoprotection) (71.1% evalue=1.E-120); choline/glycine/betaine ABC transporter substrate-binding protein 1473408 2953524 YPTB1236 Yersinia pseudotuberculosis IP 32953 choline/glycine/betaine ABC transporter substrate-binding protein YP_069771.1 1472476 D 273123 CDS YP_069772.1 51595581 2953525 1473669..1474823 1 NC_006155.1 similar to Yersinia pestis YPO1197 ABC transport integral membrane subunit (100% evalue=0); Escherichia coli Z3379 yehY; transport system permease (52.3% evalue=1.E-105); choline/glycine/betaine ABC transporter permease 1474823 2953525 YPTB1237 Yersinia pseudotuberculosis IP 32953 choline/glycine/betaine ABC transporter permease YP_069772.1 1473669 D 273123 CDS YP_069773.1 51595582 2953526 1474820..1475758 1 NC_006155.1 similar to Yersinia pestis YPO1198 ABC transport ATP-binding subunit (99.6% evalue=1.E-175); Salmonella typhimurium STM2163 yehX; ABC-type proline/glycine betaine transport system, ATPase component (68% evalue=1.E-112); choline/glycine/betaine ABC transporter ATP-binding protein 1475758 2953526 YPTB1238 Yersinia pseudotuberculosis IP 32953 choline/glycine/betaine ABC transporter ATP-binding protein YP_069773.1 1474820 D 273123 CDS YP_069774.1 51595583 2953527 1475755..1476591 1 NC_006155.1 similar to Yersinia pestis YPO1199 ABC transport integral membrane subunit (100% evalue=1.E-153); Salmonella typhi STY2392 yehW; permease transmembrane component (67% evalue=6.E-83); choline/glycine/betaine ABC transporter permease 1476591 2953527 YPTB1239 Yersinia pseudotuberculosis IP 32953 choline/glycine/betaine ABC transporter permease YP_069774.1 1475755 D 273123 CDS YP_069775.1 51595584 2953528 1477045..1478379 1 NC_006155.1 similar to Yersinia pestis YPO1200 amino acid permease (99.7% evalue=0); Salmonella typhi STY4493 amino acid permease (88.1% evalue=0); arginine:agmatin antiporter 1478379 2953528 YPTB1240 Yersinia pseudotuberculosis IP 32953 arginine:agmatin antiporter YP_069775.1 1477045 D 273123 CDS YP_069776.1 51595585 2953529 1478449..1480755 1 NC_006155.1 similar to Yersinia pestis YPO1201 arginine decarboxylase (99.8% evalue=0); Escherichia coli Z5719 adiA; biodegradative arginine decarboxylase (52.4% evalue=0); arginine decarboxylase 1480755 2953529 YPTB1241 Yersinia pseudotuberculosis IP 32953 arginine decarboxylase YP_069776.1 1478449 D 273123 CDS YP_069777.1 51595586 2953530 complement(1480873..1481091) 1 NC_006155.1 hypothetical protein 1481091 2953530 YPTB1242 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069777.1 1480873 R 273123 CDS YP_069778.1 51595587 2953531 complement(1481216..1482106) 1 NC_006155.1 similar to Yersinia pestis YPO1203 membrane protein (99.3% evalue=1.E-162); Salmonella typhi STY2198 yedA; membrane protein (68.9% evalue=1.E-110); hypothetical protein 1482106 2953531 YPTB1243 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069778.1 1481216 R 273123 CDS YP_069779.1 51595588 2953532 complement(1482518..1483633) 1 NC_006155.1 similar to Yersinia pestis YPO1205 ompC2; outer membrane protein C2 (99.4% evalue=0); Escherichia coli b1377 outer membrane protein (62.4% evalue=1.E-135); porin 1483633 2953532 YPTB1244 Yersinia pseudotuberculosis IP 32953 porin YP_069779.1 1482518 R 273123 CDS YP_069780.1 51595589 2955458 1483903..1486083 1 NC_006155.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1486083 dinG 2955458 dinG Yersinia pseudotuberculosis IP 32953 ATP-dependent DNA helicase DinG YP_069780.1 1483903 D 273123 CDS YP_069781.1 51595590 2955907 complement(1486151..1487593) 1 NC_006155.1 similar to Yersinia pestis YPO1207 katA; catalase (100% evalue=0); Pseudomonas aeruginosa PA4236 katA; catalase (80.3% evalue=0); catalase 1487593 katA 2955907 katA Yersinia pseudotuberculosis IP 32953 catalase YP_069781.1 1486151 R 273123 CDS YP_069782.1 51595591 2953533 1487951..1488493 1 NC_006155.1 similar to Yersinia pestis YPO1208 exported protein (99.4% evalue=2.E-98); Escherichia coli Z3508 hypothetical protein (51.1% evalue=9.E-55); hypothetical protein 1488493 2953533 YPTB1247 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069782.1 1487951 D 273123 CDS YP_069783.1 51595592 2956847 complement(1488729..1489937) 1 NC_006155.1 similar to Yersinia pestis YPO1209 tyrP; tyrosine-specific transport protein (99.7% evalue=0); Escherichia coli JW1895 tyrP; Tyrosine-specific transport protein (tyrosine permease) (79.1% evalue=0); HAAAP family tyrosine/H(+) symporter TyrP 1489937 tyrP 2956847 tyrP Yersinia pseudotuberculosis IP 32953 HAAAP family tyrosine/H(+) symporter TyrP YP_069783.1 1488729 R 273123 CDS YP_069784.1 51595593 2953534 complement(1490211..1490462) 1 NC_006155.1 hypothetical protein 1490462 2953534 YPTB1249 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069784.1 1490211 R 273123 CDS YP_069785.1 51595594 2953535 1490556..1491749 1 NC_006155.1 similar to Yersinia pestis YPO1210 conserved hypothetical protein (99.7% evalue=0); Salmonella typhi STY2523 conserved hypothetical protein (59.9% evalue=1.E-137); competence damage-inducible protein A 1491749 2953535 YPTB1250 Yersinia pseudotuberculosis IP 32953 competence damage-inducible protein A YP_069785.1 1490556 D 273123 CDS YP_069786.1 51595595 2955493 complement(1491807..1492316) 1 NC_006155.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1492316 eco 2955493 eco Yersinia pseudotuberculosis IP 32953 ecotin YP_069786.1 1491807 R 273123 CDS YP_069787.1 51595596 2953536 complement(1492351..1492608) 1 NC_006155.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin 1492608 2953536 YPTB1252 Yersinia pseudotuberculosis IP 32953 2Fe-2S ferredoxin YP_069787.1 1492351 R 273123 CDS YP_069788.1 51595597 2956155 complement(1492612..1493742) 1 NC_006155.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 1493742 nrdB 2956155 nrdB Yersinia pseudotuberculosis IP 32953 ribonucleotide-diphosphate reductase subunit beta YP_069788.1 1492612 R 273123 CDS YP_069789.1 51595598 2956154 complement(1493904..1496192) 1 NC_006155.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1496192 nrdA 2956154 nrdA Yersinia pseudotuberculosis IP 32953 ribonucleotide-diphosphate reductase subunit alpha YP_069789.1 1493904 R 273123 CDS YP_069790.1 51595599 2956854 complement(1496686..1497414) 1 NC_006155.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 1497414 ubiG 2956854 ubiG Yersinia pseudotuberculosis IP 32953 3-demethylubiquinone-9 3-methyltransferase YP_069790.1 1496686 R 273123 CDS YP_069791.1 51595600 2955766 1497714..1500407 1 NC_006155.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1500407 gyrA 2955766 gyrA Yersinia pseudotuberculosis IP 32953 DNA gyrase subunit A YP_069791.1 1497714 D 273123 CDS YP_069792.1 51595601 2956407 1500595..1503468 1 NC_006155.1 similar to Yersinia pestis YPO1217 rcsC; two component sensor kinase/response regulator protein RcsC (99.8% evalue=0); Salmonella typhi STY2496 rcsC; sensor protein RcsC (58% evalue=0); hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1503468 rcsC 2956407 rcsC Yersinia pseudotuberculosis IP 32953 hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_069792.1 1500595 D 273123 CDS YP_069793.1 51595602 2956406 complement(1503536..1504189) 1 NC_006155.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 1504189 rcsB 2956406 rcsB Yersinia pseudotuberculosis IP 32953 transcriptional regulator RcsB YP_069793.1 1503536 R 273123 CDS YP_069794.1 51595603 2953537 complement(1504192..1506885) 1 NC_006155.1 similar to Salmonella typhi STY2494 yojN; two-component system sensor kinase (46.4% evalue=0); Salmonella typhimurium STM2269 yojN; sensor/kinase in regulatory system (46.5% evalue=0); phosphotransfer intermediate protein in two-component regulatory system with RcsBC 1506885 2953537 YPTB1259 Yersinia pseudotuberculosis IP 32953 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_069794.1 1504192 R 273123 CDS YP_069795.1 51595604 2953538 complement(1506909..1508063) 1 NC_006155.1 similar to Yersinia pestis YPO1221 membrane protein (100% evalue=0); Agrobacterium tumefaciens AGR_C_4938 probable transport protein (36.8% evalue=6.E-59); MFS transporter 1508063 2953538 YPTB1260 Yersinia pseudotuberculosis IP 32953 MFS transporter YP_069795.1 1506909 R 273123 CDS YP_069796.1 51595605 2953539 1509158..1510282 1 NC_006155.1 allows for ions and hydrophilic solutes to cross the outer membrane; porin 1510282 2953539 YPTB1261 Yersinia pseudotuberculosis IP 32953 porin YP_069796.1 1509158 D 273123 CDS YP_069797.1 51595606 2955192 complement(1511022..1512188) 1 NC_006155.1 this protein has no known enzymatic function; beta-lactam binding protein AmpH 1512188 ampH 2955192 ampH Yersinia pseudotuberculosis IP 32953 beta-lactam binding protein AmpH YP_069797.1 1511022 R 273123 CDS YP_069798.1 51595607 2953540 complement(1512463..1513989) 1 NC_006155.1 similar to Yersinia pestis YPO1226 transport protein (99.5% evalue=0); Clostridium acetobutylicum CAC0357 permease of the Na:galactoside symporter family (37.6% evalue=4.E-96); GPH family oligogalacturonide symporter 1513989 2953540 YPTB1263 Yersinia pseudotuberculosis IP 32953 GPH family oligogalacturonide symporter YP_069798.1 1512463 R 273123 CDS YP_069799.1 51595608 2953541 1514366..1515394 1 NC_006155.1 similar to Yersinia pestis YPO1228 conserved hypothetical protein (99.7% evalue=0); Ralstonia solanacearum RS02069 conserved hypothetical protein (41.1% evalue=1.E-67); hypothetical protein 1515394 2953541 YPTB1264 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069799.1 1514366 D 273123 CDS YP_069800.1 51595609 2956840 complement(1515468..1517255) 1 NC_006155.1 similar to Yersinia pestis YPO1229 tsr2, cheD2; methyl-accepting chemotaxis protein (100% evalue=0); Ralstonia solanacearum RS04837 methyl-accepting chemotaxis transmembrane protein (55.3% evalue=1.E-180); methyl-accepting chemotaxis protein 1517255 tsr2 2956840 tsr2 Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein YP_069800.1 1515468 R 273123 CDS YP_069801.1 51595610 2956275 complement(1517662..1518597) 1 NC_006155.1 outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA; outer membrane protease 1518597 pla2 2956275 pla2 Yersinia pseudotuberculosis IP 32953 outer membrane protease YP_069801.1 1517662 R 273123 CDS YP_069802.1 51595611 2956086 complement(1518769..1519011) 1 NC_006155.1 similar to Yersinia pestis YPO1232 msgA, dinI; stress response protein (100% evalue=9.E-40); Salmonella typhi STY1883 msgA; virulence protein (61.8% evalue=1.E-20); stress response protein 1519011 msgA 2956086 msgA Yersinia pseudotuberculosis IP 32953 stress response protein YP_069802.1 1518769 R 273123 CDS YP_069803.1 51595612 2953542 complement(1519217..1519939) 1 NC_006155.1 similar to Yersinia pestis YPO1233 prophage repressor protein (100% evalue=1.E-135); Escherichia coli ECs0274 repressor protein CI (47.6% evalue=1.E-56); cI prophage repressor protein 1519939 2953542 YPTB1268 Yersinia pseudotuberculosis IP 32953 cI prophage repressor protein YP_069803.1 1519217 R 273123 CDS YP_069804.1 51595613 2953543 1520213..1520692 1 NC_006155.1 similar to Yersinia pestis YPO1234 probable phage antitermination protein Q (100% evalue=6.E-88); Salmonella typhimurium STM2239 phage protein; homology to antiterminator protein Q of phage P5 (60.8% evalue=3.E-37); phage antitermination protein Q 1520692 2953543 YPTB1269 Yersinia pseudotuberculosis IP 32953 phage antitermination protein Q YP_069804.1 1520213 D 273123 CDS YP_069805.1 51595614 2953544 1520894..1522207 1 NC_006155.1 similar to Yersinia pestis YPO1235 conserved hypothetical protein (99.3% evalue=0); Brucella melitensis BMEII1091 hypothetical pyridoxal phosphate biosynthesis protein (46.1% evalue=1.E-103); hypothetical protein 1522207 2953544 YPTB1270 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069805.1 1520894 D 273123 CDS YP_069806.1 51595615 2953546 1522935..1523750 1 NC_006155.1 similar to Yersinia pestis YPO1237 transcriptional regulatory protein (100% evalue=1.E-150); Pasteurella multocida PM1367 glycerol-3 phosphate regulon, (47.6% evalue=2.E-57); transcriptional regulator 1523750 2953546 YPTB1272 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069806.1 1522935 D 273123 CDS YP_069807.1 51595616 2953547 1523726..1524520 1 NC_006155.1 similar to Yersinia pestis YPO1238 conserved hypothetical protein (99.6% evalue=1.E-148); Salmonella typhimurium STM2915 ygbM; endonuclease (46.2% evalue=7.E-60); hypothetical protein 1524520 2953547 YPTB1273 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069807.1 1523726 D 273123 CDS YP_069808.1 51595617 2953548 1525116..1525406 1 NC_006155.1 similar to Yersinia pestis YPO1239 bacteriophage protein (98.9% evalue=3.E-48); bacteriophage protein 1525406 2953548 YPTB1274 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_069808.1 1525116 D 273123 CDS YP_069809.1 51595618 2953549 1525422..1526069 1 NC_006155.1 similar to Yersinia pestis YPO1240 ATP-binding protein (100% evalue=1.E-110); bacteriophage ATP-binding protein 1526069 2953549 YPTB1275 Yersinia pseudotuberculosis IP 32953 bacteriophage ATP-binding protein YP_069809.1 1525422 D 273123 CDS YP_069810.1 51595619 2953550 1526074..1526268 1 NC_006155.1 similar to Yersinia pestis YPO1241 bacteriophage protein (100% evalue=6.E-31); Escherichia coli ECs4978 hypothetical protein (44.6% evalue=4.E-07); bacteriophage protein 1526268 2953550 YPTB1276 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_069810.1 1526074 D 273123 CDS YP_069811.1 51595620 2953551 1526265..1527773 1 NC_006155.1 similar to Yersinia pestis YPO1242 bacteriophage tail sheath protein (100% evalue=0); H. influenzae HI1511 hypothetical protein HI1511 (40% evalue=1.E-93); bacteriophage tail sheath protein 1527773 2953551 YPTB1277 Yersinia pseudotuberculosis IP 32953 bacteriophage tail sheath protein YP_069811.1 1526265 D 273123 CDS YP_069812.1 51595621 2953552 1527795..1528163 1 NC_006155.1 similar to Yersinia pestis YPO1243 hypothetical protein, 99% identical; hypothetical protein 1528163 2953552 YPTB1278 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069812.1 1527795 D 273123 CDS YP_069813.1 51595622 2953553 1528165..1528464 1 NC_006155.1 similar to Yersinia pestis YPO1244 hypothetical protein (100% evalue=3.E-50); bacteriophage protein 1528464 2953553 YPTB1279 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_069813.1 1528165 D 273123 CDS YP_069814.1 51595623 2953554 1528585..1530078 1 NC_006155.1 similar to Yersinia pestis YPO1245 bacteriophage coat protein (100% evalue=0); bacteriophage coat protein 1530078 2953554 YPTB1280 Yersinia pseudotuberculosis IP 32953 bacteriophage coat protein YP_069814.1 1528585 D 273123 CDS YP_069815.1 51595624 2953555 1530345..1531751 1 NC_006155.1 similar to Yersinia pestis YPO1246 bacteriophage protein (99.1% evalue=0); H. influenzae HI1515 muN; N protein (25.2% evalue=2.E-15); bacteriophage protein 1531751 2953555 YPTB1281 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_069815.1 1530345 D 273123 CDS YP_069816.1 51595625 2953556 1531748..1532803 1 NC_006155.1 similar to Yersinia pestis YPO1247 bacteriophage tail protein (99.7% evalue=0); Escherichia coli ECs4984 tail protein (29.2% evalue=3.E-31); bacteriophage tail protein 1532803 2953556 YPTB1282 Yersinia pseudotuberculosis IP 32953 bacteriophage tail protein YP_069816.1 1531748 D 273123 CDS YP_069817.1 51595626 2953557 1532819..1533415 1 NC_006155.1 similar to Yersinia pestis YPO1248 bacteriophage (baseplate assembly) protein (100% evalue=1.E-108); Neisseria meningitidis NMB1111 baseplate assembly protein V, (36.9% evalue=1.E-12); bacteriophage (baseplate assembly) protein 1533415 2953557 YPTB1283 Yersinia pseudotuberculosis IP 32953 bacteriophage (baseplate assembly) protein YP_069817.1 1532819 D 273123 CDS YP_069818.1 51595627 2953558 1533412..1533867 1 NC_006155.1 similar to Yersinia pestis YPO1249 bacteriophage protein GP46 (100% evalue=9.E-83); Escherichia coli ECs4986 hypothetical protein (42.1% evalue=6.E-20); bacteriophage protein GP46 1533867 2953558 YPTB1284 Yersinia pseudotuberculosis IP 32953 bacteriophage protein GP46 YP_069818.1 1533412 D 273123 CDS YP_069819.1 51595628 2953559 1533871..1535007 1 NC_006155.1 similar to Yersinia pestis YPO1250 bacteriophage protein (99.7% evalue=0); H. influenzae HI1520 hypothetical protein HI1520 (29.4% evalue=1.E-30); bacteriophage protein 1535007 2953559 YPTB1285 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_069819.1 1533871 D 273123 CDS YP_069820.1 51595629 2953560 1535004..1535606 1 NC_006155.1 similar to Yersinia pestis YPO1251 bacteriophage protein (100% evalue=4.E-63); bacteriophage protein GP48 1535606 2953560 YPTB1286 Yersinia pseudotuberculosis IP 32953 bacteriophage protein GP48 YP_069820.1 1535004 D 273123 CDS YP_069821.1 51595630 2953561 1535703..1536419 1 NC_006155.1 similar to Yersinia pestis YPO1252 stf; bacteriophage tail fiber protein (95.2% evalue=4.E-52); Escherichia coli JW2351 yfdL; Hypothetical protein (34.9% evalue=2.E-13); bacteriophage tail fiber protein 1536419 2953561 YPTB1287 Yersinia pseudotuberculosis IP 32953 bacteriophage tail fiber protein YP_069821.1 1535703 D 273123 CDS YP_069822.1 51595631 2953562 1536421..1536840 1 NC_006155.1 similar to Salmonella typhi STY4610 phage tail fibre protein (35.5% evalue=2.E-08); Salmonella typhi STY3693 conserved hypothetical protein (30.7% evalue=4.E-11); tail fiber assembly protein p37 1536840 2953562 YPTB1288 Yersinia pseudotuberculosis IP 32953 tail fiber assembly protein p37 YP_069822.1 1536421 D 273123 CDS YP_069823.1 51595632 2953563 1537280..1538020 1 NC_006155.1 similar to Yersinia pestis YPO1253 LacI-family regulatory protein (100% evalue=1.E-137); B. halodurans BH0181 unknown conserved protein (46.2% evalue=2.E-58); LacI family regulatory protein 1538020 2953563 YPTB1289 Yersinia pseudotuberculosis IP 32953 LacI family regulatory protein YP_069823.1 1537280 D 273123 CDS YP_069824.1 51595633 2955283 1538311..1539747 1 NC_006155.1 similar to Yersinia pestis YPO1254 bglA; 6-phospho-beta-glucosidase (100% evalue=0); Salmonella typhimurium STM3051 bglA; 6-phospho-beta-glucosidase A (79% evalue=0); 6-phospho-beta-glucosidase 1539747 bglA 2955283 bglA Yersinia pseudotuberculosis IP 32953 6-phospho-beta-glucosidase YP_069824.1 1538311 D 273123 CDS YP_069825.1 51595634 2953564 complement(1539873..1540235) 1 NC_006155.1 similar to Yersinia pestis YPO1255 hypothetical protein (100% evalue=1.E-64); hypothetical protein 1540235 2953564 YPTB1291 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069825.1 1539873 R 273123 CDS YP_069826.1 51595635 2953565 complement(1540821..1541105) 1 NC_006155.1 hypothetical protein 1541105 2953565 YPTB1292 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069826.1 1540821 R 273123 CDS YP_069827.1 51595636 2953566 complement(1541134..1541391) 1 NC_006155.1 similar to Yersinia pestis YPO0872 hypothetical protein (87.5% evalue=1.E-33); hypothetical protein 1541391 2953566 YPTB1293 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069827.1 1541134 R 273123 CDS YP_069828.1 51595637 2953569 complement(1543440..1545236) 1 NC_006155.1 similar to Yersinia pestis YPO1260 membrane protein (100% evalue=0); Salmonella typhi STY2466 yejM; sulphatase (63.5% evalue=0); hypothetical protein 1545236 2953569 YPTB1296 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069828.1 1543440 R 273123 CDS YP_069829.1 51595638 2953570 complement(1545264..1545491) 1 NC_006155.1 similar to Yersinia pestis YPO1261 conserved hypothetical protein (100% evalue=4.E-35); Salmonella typhimurium STM2227 yejL; cytoplasmic protein (81.3% evalue=6.E-29); hypothetical protein 1545491 2953570 YPTB1297 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069829.1 1545264 R 273123 CDS YP_069830.1 51595639 2953571 1545669..1546673 1 NC_006155.1 similar to Yersinia pestis YPO1262 nucleoid-associated protein (99.7% evalue=0); Salmonella typhi STY2463 yejK; nucleoid-asociated protein (78.4% evalue=1.E-147); nucleoid-associated protein NdpA 1546673 2953571 YPTB1298 Yersinia pseudotuberculosis IP 32953 nucleoid-associated protein NdpA YP_069830.1 1545669 D 273123 CDS YP_069831.1 51595640 2956509 complement(1546761..1547045) 1 NC_006155.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1547045 rplY 2956509 rplY Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L25 YP_069831.1 1546761 R 273123 CDS YP_069832.1 51595641 2953572 complement(1547207..1548964) 1 NC_006155.1 similar to Yersinia pestis YPO1265 DEAD box helicase family protein (99.6% evalue=0); Salmonella typhi STY2460 yejH; helicase (77.9% evalue=0); DEAD/DEAH box helicase 1548964 2953572 YPTB1300 Yersinia pseudotuberculosis IP 32953 DEAD/DEAH box helicase YP_069832.1 1547207 R 273123 CDS YP_069833.1 51595642 2956560 1549498..1550205 1 NC_006155.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 1550205 rsuA 2956560 rsuA Yersinia pseudotuberculosis IP 32953 16S rRNA pseudouridylate synthase A YP_069833.1 1549498 D 273123 CDS YP_069834.1 51595643 2955275 1550384..1551583 1 NC_006155.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 1551583 bcr 2955275 bcr Yersinia pseudotuberculosis IP 32953 bicyclomycin/multidrug efflux system protein YP_069834.1 1550384 D 273123 CDS YP_069835.1 51595644 2953573 1552586..1552930 1 NC_006155.1 similar to Yersinia pestis YPO1269 conserved hypothetical protein (98.2% evalue=4.E-61); Escherichia coli JW2169 yejG; Hypothetical protein (55.2% evalue=2.E-29); hypothetical protein 1552930 2953573 YPTB1303 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069835.1 1552586 D 273123 CDS YP_069836.1 51595645 2957015 complement(1552991..1554583) 1 NC_006155.1 similar to Yersinia pestis YPO1270 ABC transporter ATP-binding subunit (99.6% evalue=0); Salmonella typhimurium STM2219 yejF; ATPase component of ABC-type transport system, contain duplicated ATPase domain (71.4% evalue=0); oligo-dipeptide/nickel ABC transporter ATP-binding subunit 1554583 yejF 2957015 yejF Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter ATP-binding subunit YP_069836.1 1552991 R 273123 CDS YP_069837.1 51595646 2957014 complement(1554585..1555613) 1 NC_006155.1 similar to Yersinia pestis YPO1271 ABC transporter integral membrane subunit (100% evalue=0); Escherichia coli ECs3071 transport system permease (78.4% evalue=1.E-158); oligo-dipeptide/nickel ABC transporter permease 1555613 yejE 2957014 yejE Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter permease YP_069837.1 1554585 R 273123 CDS YP_069838.1 51595647 2957013 complement(1555613..1556713) 1 NC_006155.1 similar to Yersinia pestis YPO1272 ABC transporter integral membrane subunit (99.7% evalue=0); Escherichia coli ECs3070 transport system permease (80.8% evalue=1.E-171); oligo-dipeptide/nickel ABC transporter permease 1556713 yejB 2957013 yejB Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter permease YP_069838.1 1555613 R 273123 CDS YP_069839.1 51595648 2957012 complement(1556723..1558531) 1 NC_006155.1 similar to Yersinia pestis YPO1273 substrate-binding transport protein (99.8% evalue=0); Escherichia coli JW2165 yejA; Hypothetical protein (68.1% evalue=0); oligo-dipeptide/nickel ABC transporter substrate-binding protein 1558531 yejA 2957012 yejA Yersinia pseudotuberculosis IP 32953 oligo-dipeptide/nickel ABC transporter substrate-binding protein YP_069839.1 1556723 R 273123 CDS YP_069840.1 51595649 2953574 complement(1558613..1560193) 1 NC_006155.1 similar to Yersinia pestis YPO1274 membrane protein (100% evalue=0); Salmonella typhi STY2451 rtn; rtn protein (42.8% evalue=1.E-119); hypothetical protein 1560193 2953574 YPTB1308 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069840.1 1558613 R 273123 CDS YP_069841.1 51595650 2956631 complement(1560779..1561363) 1 NC_006155.1 by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein 1561363 spr 2956631 spr Yersinia pseudotuberculosis IP 32953 outer membrane lipoprotein YP_069841.1 1560779 R 273123 CDS YP_069842.1 51595651 2953575 complement(1561805..1562506) 1 NC_006155.1 similar to Yersinia pestis YPO1276 membrane protein (99.1% evalue=1.E-131); Escherichia coli Z3433 hypothetical protein (62.1% evalue=5.E-82); hypothetical protein 1562506 2953575 YPTB1310 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069842.1 1561805 R 273123 CDS YP_069843.1 51595652 2953576 complement(1562565..1563548) 1 NC_006155.1 similar to Yersinia pestis YPO1277 cobalamin synthesis protein (99% evalue=0); Escherichia coli b2173 yeiR; hypothetical 36.1 kD protein in fruB-rtn intergenic region (67.5% evalue=1.E-124); cobalamin synthesis protein 1563548 2953576 YPTB1311 Yersinia pseudotuberculosis IP 32953 cobalamin synthesis protein YP_069843.1 1562565 R 273123 CDS YP_069844.1 51595653 2953577 1563863..1564189 1 NC_006155.1 similar to Yersinia pestis YPO1278 membrane protein, 100% identical; hypothetical protein 1564189 2953577 YPTB1312 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069844.1 1563863 D 273123 CDS YP_069845.1 51595654 2953578 1564298..1565098 1 NC_006155.1 similar to Yersinia pestis YPO1279 transcriptional regulatory protein (100% evalue=1.E-140); H. influenzae HI0054 uxuR; uxu operon regulator (52.6% evalue=3.E-66); transcriptional regulator 1565098 2953578 YPTB1313 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_069845.1 1564298 D 273123 CDS YP_069846.1 51595655 2953579 complement(1565242..1566714) 1 NC_006155.1 similar to Yersinia pestis YPO1280 D-mannonate oxidoreductase (99.7% evalue=0); Escherichia coli ECs3064 oxidoreductase (64.8% evalue=0); D-mannonate oxidoreductase 1566714 2953579 YPTB1314 Yersinia pseudotuberculosis IP 32953 D-mannonate oxidoreductase YP_069846.1 1565242 R 273123 CDS YP_069847.1 51595656 2956889 1567306..1568499 1 NC_006155.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1568499 uxuA 2956889 uxuA Yersinia pseudotuberculosis IP 32953 mannonate dehydratase YP_069847.1 1567306 D 273123 CDS YP_069848.1 51595657 2953580 complement(1568639..1569211) 1 NC_006155.1 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P 1569211 2953580 YPTB1316 Yersinia pseudotuberculosis IP 32953 elongation factor P YP_069848.1 1568639 R 273123 CDS YP_069849.1 51595658 2956094 complement(1569315..1570559) 1 NC_006155.1 similar to Yersinia pestis YPO1285 mtr; tryptophan-specific transport protein (100% evalue=0); Pseudomonas aeruginosa PA5434 mtr; tryptophan permease (59.6% evalue=1.E-139); HAAAP family tryptophan-specific transporter mtr 1570559 mtr 2956094 mtr Yersinia pseudotuberculosis IP 32953 HAAAP family tryptophan-specific transporter mtr YP_069849.1 1569315 R 273123 CDS YP_069850.1 51595659 2953581 1570971..1571225 1 NC_006155.1 similar to Yersinia pestis YPO1286 conserved hypothetical protein (98.8% evalue=1.E-45); Escherichia coli JW2158 hypothetical protein (66.6% evalue=1.E-28); hypothetical protein 1571225 2953581 YPTB1318 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069850.1 1570971 D 273123 CDS YP_069851.1 51595660 2953582 complement(1571294..1572109) 1 NC_006155.1 similar to Yersinia pestis YPO1287 short chain oxidoreductase (99.2% evalue=1.E-150); Sinorhizobium meliloti SMc02034 oxidoreductase (61% evalue=6.E-80); short chain oxidoreductase 1572109 2953582 YPTB1319 Yersinia pseudotuberculosis IP 32953 short chain oxidoreductase YP_069851.1 1571294 R 273123 CDS YP_069852.1 51595661 2953583 complement(1572120..1573085) 1 NC_006155.1 similar to Yersinia pestis YPO1288 D-isomer specific 2-hydroxyacid dehydrogenase family protein (99.6% evalue=1.E-177); Mycobacterium tuberculosis Rv2996c serA; D-3-phosphoglycerate dehydrogenase (39.1% evalue=4.E-47); D-isomer specific 2-hydroxyacid dehydrogenase family protein 1573085 2953583 YPTB1320 Yersinia pseudotuberculosis IP 32953 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_069852.1 1572120 R 273123 CDS YP_069853.1 51595662 2953584 complement(1573082..1574224) 1 NC_006155.1 similar to Yersinia pestis YPO1289 conserved hypothetical protein (98.6% evalue=0); Agrobacterium tumefaciens AGR_C_4970 transcription induced by xylose (54.3% evalue=1.E-105); hypothetical protein 1574224 2953584 YPTB1321 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069853.1 1573082 R 273123 CDS YP_069854.1 51595663 2953585 1574576..1576072 1 NC_006155.1 similar to Yersinia pestis YPO1290 aldehyde dehydrogenase (99.1% evalue=0); Salmonella typhimurium STM2791 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent (44.4% evalue=1.E-111); aldehyde dehydrogenase 1576072 2953585 YPTB1322 Yersinia pseudotuberculosis IP 32953 aldehyde dehydrogenase YP_069854.1 1574576 D 273123 CDS YP_069855.1 51595664 2953586 1576076..1577629 1 NC_006155.1 similar to Yersinia pestis YPO1291 carbohydrate kinase (99.4% evalue=0); Clostridium acetobutylicum CAC2612 xylB; xylulose kinase (38.9% evalue=1.E-103); carbohydrate kinase 1577629 2953586 YPTB1323 Yersinia pseudotuberculosis IP 32953 carbohydrate kinase YP_069855.1 1576076 D 273123 CDS YP_069856.1 51595665 2956484 1577649..1578359 1 NC_006155.1 similar to Yersinia pestis YPO1292 rpiA; ribose 5-phosphate isomerase (100% evalue=1.E-136); Mesorhizobium loti mll0526 ribose 5-phosphate isomerase (44.5% evalue=2.E-42); ribose 5-phosphate isomerase 1578359 rpiA 2956484 rpiA Yersinia pseudotuberculosis IP 32953 ribose 5-phosphate isomerase YP_069856.1 1577649 D 273123 CDS YP_069857.1 51595666 2953587 1578475..1579563 1 NC_006155.1 similar to Yersinia pestis YPO1293 periplasmic carbohydrate-binding transport protein (99.7% evalue=0); Salmonella typhi STY3894 rbsB; D-ribose-binding periplasmic protein (26.8% evalue=8.E-20); sugar ABC transporter substrate-binding protein 1579563 2953587 YPTB1325 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_069857.1 1578475 D 273123 CDS YP_069858.1 51595667 2953588 1579672..1581246 1 NC_006155.1 similar to Yersinia pestis YPO1294 ABC transport ATP-binding subunit (99.2% evalue=0); Agrobacterium tumefaciens AGR_C_5112 ABC transporter protein, ATP binding component (38.8% evalue=9.E-82); sugar ABC transporter ATP-binding protein 1581246 2953588 YPTB1326 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_069858.1 1579672 D 273123 CDS YP_069859.1 51595668 2953589 1581282..1582280 1 NC_006155.1 similar to Yersinia pestis YPO1295 ABC transport integral membrane subunit (99.6% evalue=0); Lactococcus lactis L83296 rbsC; ribose ABC transporter permease (37.8% evalue=2.E-52); sugar ABC transporter permease 1582280 2953589 YPTB1327 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_069859.1 1581282 D 273123 CDS YP_069860.1 51595669 2953590 complement(1582373..1582828) 1 NC_006155.1 similar to Yersinia pestis YPO1296 Mut family protein (100% evalue=3.E-88); Pseudomonas aeruginosa PA2769 hypothetical protein (39.8% evalue=8.E-18); Mut family protein 1582828 2953590 YPTB1328 Yersinia pseudotuberculosis IP 32953 Mut family protein YP_069860.1 1582373 R 273123 CDS YP_069861.1 51595670 2955644 1583090..1584223 1 NC_006155.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; PTS system fructose-specific transporter subunit IIA/HPr protein 1584223 fruB 2955644 fruB Yersinia pseudotuberculosis IP 32953 PTS system fructose-specific transporter subunit IIA/HPr protein YP_069861.1 1583090 D 273123 CDS YP_069862.1 51595671 2955645 1584220..1585158 1 NC_006155.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 1585158 fruK 2955645 fruK Yersinia pseudotuberculosis IP 32953 1-phosphofructokinase YP_069862.1 1584220 D 273123 CDS YP_069863.1 51595672 2955643 1585173..1586873 1 NC_006155.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 1586873 fruA 2955643 fruA Yersinia pseudotuberculosis IP 32953 PTS system fructose-specific transporter subunit IIBC YP_069863.1 1585173 D 273123 CDS YP_069864.1 51595673 2956336 1587198..1587842 1 NC_006155.1 similar to Yersinia pestis YPO1301 psaE; regulatory protein (100% evalue=1.E-118); regulatory protein 1587842 psaE 2956336 psaE Yersinia pseudotuberculosis IP 32953 regulatory protein YP_069864.1 1587198 D 273123 CDS YP_069865.1 51595674 2956337 1587839..1588327 1 NC_006155.1 similar to Yersinia pestis YPO1302 psaF; membrane protein (100% evalue=2.E-90); hypothetical protein 1588327 psaF 2956337 psaF Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069865.1 1587839 D 273123 CDS YP_069866.1 51595675 2956333 1588872..1589348 1 NC_006155.1 similar to Yersinia pestis YPO1303 psaA; pH 6 antigen precursor (antigen 4) (adhesin) (100% evalue=6.E-91); adhesin 1589348 psaA 2956333 psaA Yersinia pseudotuberculosis IP 32953 adhesin YP_069866.1 1588872 D 273123 CDS YP_069867.1 51595676 2956334 1589475..1590296 1 NC_006155.1 similar to Yersinia pestis YPO1304 psaB; chaperone protein PsaB precursor (100% evalue=1.E-158); Salmonella typhimurium STM0300 safB; fimbriae assembly chaparone (45.4% evalue=1.E-54); chaperone protein PsaB 1590296 psaB 2956334 psaB Yersinia pseudotuberculosis IP 32953 chaperone protein PsaB YP_069867.1 1589475 D 273123 CDS YP_069868.1 51595677 2956335 1590380..1592851 1 NC_006155.1 similar to Yersinia pestis YPO1305 psaC; outer membrane usher protein PsaC precursor (100% evalue=0); Salmonella typhi STY0336 safC; outer-membrane fimbrial usher protein (46.3% evalue=0); outer membrane usher protein PsaC 1592851 psaC 2956335 psaC Yersinia pseudotuberculosis IP 32953 outer membrane usher protein PsaC YP_069868.1 1590380 D 273123 CDS YP_069869.1 51595678 2956136 complement(1592938..1593795) 1 NC_006155.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1593795 nfo 2956136 nfo Yersinia pseudotuberculosis IP 32953 endonuclease IV YP_069869.1 1592938 R 273123 CDS YP_069870.1 51595679 2953591 complement(1593959..1595047) 1 NC_006155.1 similar to Yersinia pestis YPO1307 membrane protein (100% evalue=0); Escherichia coli JW2145 yeiH; Hypothetical protein (66.3% evalue=1.E-121); hypothetical protein 1595047 2953591 YPTB1338 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069870.1 1593959 R 273123 CDS YP_069871.1 51595680 2953592 1595705..1596577 1 NC_006155.1 similar to Yersinia pestis YPO1308 LysR-family transcriptional regulatory protein (100% evalue=1.E-162); Salmonella typhimurium STM2201 yeiE; transcriptional regulator, LysR family (73.8% evalue=1.E-119); DNA-binding transcriptional regulator 1596577 2953592 YPTB1339 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_069871.1 1595705 D 273123 CDS YP_069872.1 51595681 2955978 1596835..1598346 1 NC_006155.1 similar to Yersinia pestis YPO1309 lysP, cadR; lysine-specific permease (100% evalue=0); Escherichia coli ECs3048 lysine-specific permease (87.6% evalue=0); lysine transporter 1598346 lysP 2955978 lysP Yersinia pseudotuberculosis IP 32953 lysine transporter YP_069872.1 1596835 D 273123 CDS YP_069873.1 51595682 2953593 1598632..1599777 1 NC_006155.1 similar to Yersinia pestis YPO1310 periplasmic substrate-binding transport protein (99.7% evalue=0); Agrobacterium tumefaciens Atu3391 ABC transporter, substrate binding protein [iron] (37.5% evalue=9.E-76); iron siderophore/cobalamin ABC transporter substrate-binding protein 1599777 2953593 YPTB1341 Yersinia pseudotuberculosis IP 32953 iron siderophore/cobalamin ABC transporter substrate-binding protein YP_069873.1 1598632 D 273123 CDS YP_069874.1 51595683 2953594 1599976..1601058 1 NC_006155.1 similar to Yersinia pestis YPO1311 FecCD-family membrane transport protein (100% evalue=0); Salmonella typhi STY0802 ABC transporter permease (FecCD_family) (72.8% evalue=1.E-141); iron ABC transporter permease 1601058 2953594 YPTB1342 Yersinia pseudotuberculosis IP 32953 iron ABC transporter permease YP_069874.1 1599976 D 273123 CDS YP_069875.1 51595684 2953595 1601055..1601843 1 NC_006155.1 similar to Yersinia pestis YPO1312 siderophore ABC transporter, ATP-binding subunit (99.6% evalue=1.E-144); Salmonella typhimurium STM0771 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component (72.4% evalue=1.E-103); siderophore/cobalamin ABC transporter ATP-binding subunit 1601843 2953595 YPTB1343 Yersinia pseudotuberculosis IP 32953 siderophore/cobalamin ABC transporter ATP-binding subunit YP_069875.1 1601055 D 273123 CDS YP_069876.1 51595685 2953596 1602103..1604100 1 NC_006155.1 YiuR; outer membrane siderophore receptor; outer membrane receptor 1604100 2953596 YPTB1344 Yersinia pseudotuberculosis IP 32953 outer membrane receptor YP_069876.1 1602103 D 273123 CDS YP_069877.1 51595686 2953597 complement(1604371..1604991) 1 NC_006155.1 similar to Yersinia pestis YPO1314 glutathione S-transferase-family protein (99.5% evalue=1.E-119); Pseudomonas aeruginosa PA2813 probable glutathione S-transferase (51.4% evalue=6.E-65); glutathione S-transferase 1604991 2953597 YPTB1345 Yersinia pseudotuberculosis IP 32953 glutathione S-transferase YP_069877.1 1604371 R 273123 CDS YP_069878.1 51595687 2953598 complement(1605196..1605858) 1 NC_006155.1 similar to Yersinia pestis YPO1315 hydrolase (100% evalue=1.E-125); Pseudomonas aeruginosa PA1143 hypothetical protein (42.2% evalue=4.E-39); hydrolase 1605858 2953598 YPTB1346 Yersinia pseudotuberculosis IP 32953 hydrolase YP_069878.1 1605196 R 273123 CDS YP_069879.1 51595688 2953599 1606345..1607412 1 NC_006155.1 similar to Yersinia pestis YPO1316 iron/ascorbate oxidoreductase family protein (99.7% evalue=0); Mesorhizobium loti mlr6892 hypothetical protein (61.7% evalue=1.E-118); iron/ascorbate oxidoreductase family protein 1607412 2953599 YPTB1347 Yersinia pseudotuberculosis IP 32953 iron/ascorbate oxidoreductase family protein YP_069879.1 1606345 D 273123 CDS YP_069880.1 51595689 2953600 1607640..1608464 1 NC_006155.1 similar to Yersinia pestis YPO1317 exported protein (99.2% evalue=1.E-151); Pseudomonas aeruginosa PA3931 conserved hypothetical protein (50.5% evalue=6.E-59); ABC transporter substrate-binding protein 1608464 2953600 YPTB1348 Yersinia pseudotuberculosis IP 32953 ABC transporter substrate-binding protein YP_069880.1 1607640 D 273123 CDS YP_069881.1 51595690 2953601 1608461..1609447 1 NC_006155.1 similar to Yersinia pestis YPO1318 ABC transport ATP-binding subunit (100% evalue=1.E-180); Mesorhizobium loti mll4792 ABC transporter, ATP-binding protein (51.2% evalue=9.E-79); ABC transporter ATP-binding protein 1609447 2953601 YPTB1349 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_069881.1 1608461 D 273123 CDS YP_069882.1 51595691 2953602 1609444..1610115 1 NC_006155.1 similar to Yersinia pestis YPO1319 ABC transport integral membrane subunit (100% evalue=1.E-119); Ralstonia solanacearum RS04492 probable transmembrane ABC transporter protein (54.6% evalue=4.E-64); ABC transport permease subunit 1610115 2953602 YPTB1350 Yersinia pseudotuberculosis IP 32953 ABC transport permease subunit YP_069882.1 1609444 D 273123 CDS YP_069883.1 51595692 2955421 1610450..1611655 1 NC_006155.1 similar to Yersinia pestis YPO1320 dacC; D-alanyl-D-alanine carboxypeptidase (100% evalue=0); Escherichia coli ECs0919 D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6 (71.4% evalue=1.E-164); D-alanyl-D-alanine carboxypeptidase 1611655 dacC 2955421 dacC Yersinia pseudotuberculosis IP 32953 D-alanyl-D-alanine carboxypeptidase YP_069883.1 1610450 D 273123 CDS YP_069884.1 51595693 2956576 complement(1612130..1613431) 1 NC_006155.1 similar to Yersinia pestis YPO1321 sdaC, dcrA; serine transporter (99.7% evalue=0); Escherichia coli Z4113 sdaC; probable serine transporter (82.9% evalue=0); HAAAP family serine/H(+) symporter SdaC 1613431 sdaC 2956576 sdaC Yersinia pseudotuberculosis IP 32953 HAAAP family serine/H(+) symporter SdaC YP_069884.1 1612130 R 273123 CDS YP_069885.1 51595694 2955454 complement(1614532..1615296) 1 NC_006155.1 similar to Yersinia pestis YPO1322 deoR, nucR; deoxyribose operon repressor (100% evalue=1.E-144); Salmonella typhimurium STM0864 deoR; transcriptional repressor for deoxyribose operon (DeoR family) (57.9% evalue=1.E-80); DNA-binding transcriptional repressor DeoR 1615296 deoR 2955454 deoR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor DeoR YP_069885.1 1614532 R 273123 CDS YP_069886.1 51595695 2955451 complement(1615527..1616198) 1 NC_006155.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1616198 deoC 2955451 deoC Yersinia pseudotuberculosis IP 32953 deoxyribose-phosphate aldolase YP_069886.1 1615527 R 273123 CDS YP_069887.1 51595696 2953603 complement(1616456..1617061) 1 NC_006155.1 similar to Yersinia pestis YPO1324 permease (100% evalue=1.E-115); Salmonella typhimurium STM0865 ybjG; permease (57.5% evalue=9.E-68); undecaprenyl pyrophosphate phosphatase 1617061 2953603 YPTB1355 Yersinia pseudotuberculosis IP 32953 undecaprenyl pyrophosphate phosphatase YP_069887.1 1616456 R 273123 CDS YP_069888.1 51595697 2953604 complement(1617061..1617876) 1 NC_006155.1 similar to Yersinia pestis YPO1325 membrane protein (99.6% evalue=1.E-161); Pseudomonas aeruginosa PA4382 hypothetical protein (34.9% evalue=2.E-28); hypothetical protein 1617876 2953604 YPTB1356 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069888.1 1617061 R 273123 CDS YP_069889.1 51595698 2953605 complement(1618209..1619897) 1 NC_006155.1 similar to Yersinia pestis YPO1326 TrkA, Potassium channel-family protein (99.8% evalue=0); Salmonella typhimurium STM0870 transport protein (90.8% evalue=0); hypothetical protein 1619897 2953605 YPTB1357 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069889.1 1618209 R 273123 CDS YP_069890.1 51595699 2955748 complement(1620307..1620570) 1 NC_006155.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1620570 grxA 2955748 grxA Yersinia pseudotuberculosis IP 32953 glutaredoxin YP_069890.1 1620307 R 273123 CDS YP_069891.1 51595700 2953606 1621033..1621347 1 NC_006155.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein 1621347 2953606 YPTB1359 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069891.1 1621033 D 273123 CDS YP_069892.1 51595701 2953607 1621489..1621974 1 NC_006155.1 similar to Yersinia pestis YPO1330 conserved hypothetical protein (100% evalue=4.E-87); Salmonella typhimurium STM0876 ybjN; cytoplasmic protein (68.9% evalue=9.E-58); hypothetical protein 1621974 2953607 YPTB1360 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069892.1 1621489 D 273123 CDS YP_069893.1 51595702 2956297 1622527..1623636 1 NC_006155.1 similar to Yersinia pestis YPO1331 potF; putrescine-binding periplasmic protein precursor (100% evalue=0); Escherichia coli JW0838 potF; Putrescine transport protein PotF (85.9% evalue=0); putrescine ABC transporter periplasmic-binding protein 1623636 potF 2956297 potF Yersinia pseudotuberculosis IP 32953 putrescine ABC transporter periplasmic-binding protein YP_069893.1 1622527 D 273123 CDS YP_069894.1 51595703 2956298 1623807..1624940 1 NC_006155.1 part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 1624940 potG 2956298 potG Yersinia pseudotuberculosis IP 32953 putrescine ABC transporter ATP-binding protein YP_069894.1 1623807 D 273123 CDS YP_069895.1 51595704 2956299 1624965..1625930 1 NC_006155.1 similar to Yersinia pestis YPO1333 potH; putrescine transport system permease (99.3% evalue=0); Salmonella typhimurium STM0879 potH; ABC superfamily (membrane), putrescine transporter (80.6% evalue=1.E-149); putrescine ABC transporter membrane protein 1625930 potH 2956299 potH Yersinia pseudotuberculosis IP 32953 putrescine ABC transporter membrane protein YP_069895.1 1624965 D 273123 CDS YP_069896.1 51595705 2953608 1626876..1627340 1 NC_006155.1 similar to Yersinia pestis YPO1335 membrane protein (99.3% evalue=3.E-84); Salmonella typhi STY0914 membrane protein (42.3% evalue=4.E-27); hypothetical protein 1627340 2953608 YPTB1365 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069896.1 1626876 D 273123 CDS YP_069897.1 51595706 2953609 1627424..1628554 1 NC_006155.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1628554 rumB 2953609 rumB Yersinia pseudotuberculosis IP 32953 23S rRNA methyluridine methyltransferase YP_069897.1 1627424 D 273123 CDS YP_069898.1 51595707 2955236 complement(1628681..1629412) 1 NC_006155.1 similar to Escherichia coli b0860 artJ; L-arginine transport system substrate-binding protein (78.6% evalue=1.E-110); Escherichia coli JW0844 artJ; Arginine-binding protein ArtJ (78.6% evalue=1.E-110); arginine ABC transporter substrate-binding protein artJ 1629412 artJ 2955236 artJ Yersinia pseudotuberculosis IP 32953 arginine ABC transporter substrate-binding protein artJ YP_069898.1 1628681 R 273123 CDS YP_069899.1 51595708 2953610 1630182..1631108 1 NC_006155.1 similar to Yersinia pestis YPO1342 SPFH domain protein (100% evalue=1.E-169); Thermotoga maritima TM1823 ftsH protease activity modulator HflC (25% evalue=2.E-14); SPFH domain-containing protein 1631108 2953610 YPTB1368 Yersinia pseudotuberculosis IP 32953 SPFH domain-containing protein YP_069899.1 1630182 D 273123 CDS YP_069900.1 51595709 2953611 1631477..1632613 1 NC_006155.1 similar to Yersinia pestis YPO1343 periplasmic binding protein (99.4% evalue=0); Agrobacterium tumefaciens Atu3391 ABC transporter, substrate binding protein [iron] (25.3% evalue=4.E-30); periplasmic iron/siderophore binding protein 1632613 2953611 YPTB1369 Yersinia pseudotuberculosis IP 32953 periplasmic iron/siderophore binding protein YP_069900.1 1631477 D 273123 CDS YP_069901.1 51595710 2953612 1632613..1633671 1 NC_006155.1 similar to Yersinia pestis YPO1344 FecCD transport family protein (100% evalue=1.E-83); Sinorhizobium meliloti SMb21430 iron ABC transporter permease (47.9% evalue=3.E-82); FecCD ABC type transporter, permease 1633671 2953612 YPTB1370 Yersinia pseudotuberculosis IP 32953 FecCD ABC type transporter, permease YP_069901.1 1632613 D 273123 CDS YP_069902.1 51595711 2953613 1633668..1634453 1 NC_006155.1 similar to Yersinia pestis YPO1345 transport ATP-binding protein (100% evalue=1.E-147); Agrobacterium tumefaciens Atu3388 fecE; ABC transporter, nucleotide binding/ATPase [iron] (36.2% evalue=6.E-36); iron ABC transporter ATP-binding protein 1634453 2953613 YPTB1371 Yersinia pseudotuberculosis IP 32953 iron ABC transporter ATP-binding protein YP_069902.1 1633668 D 273123 CDS YP_069903.1 51595712 2953614 1634450..1635238 1 NC_006155.1 similar to Yersinia pestis YPO1346 conserved hypothetical protein (98.8% evalue=1.E-146); Pseudomonas aeruginosa PA4836 hypothetical protein (33.7% evalue=1.E-30); hypothetical protein 1635238 2953614 YPTB1372 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069903.1 1634450 D 273123 CDS YP_069904.1 51595713 2953615 1635231..1636601 1 NC_006155.1 similar to Yersinia pestis YPO1347 exported protein (100% evalue=0); Pseudomonas aeruginosa PA4835 hypothetical protein (40% evalue=9.E-81); hypothetical protein 1636601 2953615 YPTB1373 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069904.1 1635231 D 273123 CDS YP_069905.1 51595714 2953616 1636598..1637443 1 NC_006155.1 similar to Yersinia pestis YPO1348 membrane protein (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA4834 hypothetical protein (55.9% evalue=3.E-86); drug/metabolite family efflux pump 1637443 2953616 YPTB1374 Yersinia pseudotuberculosis IP 32953 drug/metabolite family efflux pump YP_069905.1 1636598 D 273123 CDS YP_069906.1 51595715 2955237 complement(1637651..1638319) 1 NC_006155.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 1638319 artM 2955237 artM Yersinia pseudotuberculosis IP 32953 arginine transporter permease subunit ArtM YP_069906.1 1637651 R 273123 CDS YP_069907.1 51595716 2955239 complement(1638319..1639035) 1 NC_006155.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 1639035 artQ 2955239 artQ Yersinia pseudotuberculosis IP 32953 arginine transporter permease subunit ArtQ YP_069907.1 1638319 R 273123 CDS YP_069908.1 51595717 2955235 complement(1639047..1639778) 1 NC_006155.1 similar to Yersinia pestis YPO1351 artI; arginine-binding periplasmic protein 1 precursor (100% evalue=1.E-136); Salmonella typhimurium STM0890 artI; ABC superfamily (bind_prot), arginine transport system (74.8% evalue=1.E-106); arginine-ABC transporter substrate-binding protein artI 1639778 artI 2955235 artI Yersinia pseudotuberculosis IP 32953 arginine-ABC transporter substrate-binding protein artI YP_069908.1 1639047 R 273123 CDS YP_069909.1 51595718 2955238 complement(1639799..1640527) 1 NC_006155.1 With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 1640527 artP 2955238 artP Yersinia pseudotuberculosis IP 32953 arginine transporter ATP-binding subunit YP_069909.1 1639799 R 273123 CDS YP_069910.1 51595719 2953617 complement(1640822..1641382) 1 NC_006155.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 1641382 2953617 YPTB1379 Yersinia pseudotuberculosis IP 32953 chorismate mutase YP_069910.1 1640822 R 273123 CDS YP_069911.1 51595720 2953618 complement(1641552..1642127) 1 NC_006155.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; lipoprotein 1642127 2953618 YPTB1380 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_069911.1 1641552 R 273123 CDS YP_069912.1 51595721 2953619 complement(1642224..1643231) 1 NC_006155.1 similar to Yersinia pestis YPO1355 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM0932 nucleoside-diphosphate-sugar epimerase (74.4% evalue=1.E-146); hypothetical protein 1643231 2953619 YPTB1381 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069912.1 1642224 R 273123 CDS YP_069913.1 51595722 2953620 complement(1643331..1644821) 1 NC_006155.1 similar to Yersinia pestis YPO1356 membrane protein (99.7% evalue=0); Salmonella typhimurium STM0933 ybjT; nucleoside-diphosphate-sugar epimerase (63.2% evalue=1.E-172); hypothetical protein 1644821 2953620 YPTB1382 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069913.1 1643331 R 273123 CDS YP_069914.1 51595723 2955973 complement(1644818..1645837) 1 NC_006155.1 low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; L-threonine aldolase 1645837 ltaA 2955973 ltaA Yersinia pseudotuberculosis IP 32953 L-threonine aldolase YP_069914.1 1644818 R 273123 CDS YP_069915.1 51595724 2956302 complement(1646186..1647907) 1 NC_006155.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1647907 poxB 2956302 poxB Yersinia pseudotuberculosis IP 32953 pyruvate dehydrogenase YP_069915.1 1646186 R 273123 CDS YP_069916.1 51595725 2955772 complement(1648051..1649073) 1 NC_006155.1 similar to Yersinia pestis YPO1359 hcr; oxidoreductase (99.7% evalue=0); Escherichia coli JW0856 hcr; NADH oxidoreductase for the HCP (59.5% evalue=1.E-104); HCP oxidoreductase 1649073 hcr 2955772 hcr Yersinia pseudotuberculosis IP 32953 HCP oxidoreductase YP_069916.1 1648051 R 273123 CDS YP_069917.1 51595726 2955771 complement(1649187..1650839) 1 NC_006155.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1650839 hcp 2955771 hcp Yersinia pseudotuberculosis IP 32953 hydroxylamine reductase YP_069917.1 1649187 R 273123 CDS YP_069918.1 51595727 2953621 complement(1651041..1651937) 1 NC_006155.1 similar to Yersinia pestis YPO1361 membrane protein (99.6% evalue=1.E-163); Salmonella typhimurium STM0938 ybjE; inner membrane protein (73.1% evalue=1.E-119); hypothetical protein 1651937 2953621 YPTB1387 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069918.1 1651041 R 273123 CDS YP_069919.1 51595728 2953622 1652290..1653957 1 NC_006155.1 similar to Yersinia pestis YPO1362 conserved hypothetical protein (100% evalue=0); Escherichia coli b0876 ybjD; hypothetical 63.6 kD protein in aqpZ-cspD intergenic region (64.4% evalue=0); hypothetical protein 1653957 2953622 YPTB1388 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069919.1 1652290 D 273123 CDS YP_069920.1 51595729 2953623 complement(1654094..1655041) 1 NC_006155.1 similar to Yersinia pestis YPO1363 virulence factor (100% evalue=0); Escherichia coli b0877 ybjX; hypothetical 38.4 kD protein in aqpZ-cspD intergenic region (46.3% evalue=8.E-74); virulence factor 1655041 2953623 YPTB1389 Yersinia pseudotuberculosis IP 32953 virulence factor YP_069920.1 1654094 R 273123 CDS YP_069921.1 51595730 2953624 1655275..1656390 1 NC_006155.1 confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA 1656390 2953624 YPTB1390 Yersinia pseudotuberculosis IP 32953 macrolide transporter subunit MacA YP_069921.1 1655275 D 273123 CDS YP_069922.1 51595731 2953625 1656390..1658339 1 NC_006155.1 with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease 1658339 2953625 YPTB1391 Yersinia pseudotuberculosis IP 32953 macrolide transporter ATP-binding /permease YP_069922.1 1656390 D 273123 CDS YP_069923.1 51595732 2955373 complement(1658620..1658883) 1 NC_006155.1 similar to Yersinia pestis YPO1366 cspD, cspH; cold shock-like protein (100% evalue=5.E-47); Salmonella typhimurium STM0943 cspD; similar to CspA but not cold shock induced (88.8% evalue=3.E-34); cold shock-like protein 1658883 cspD 2955373 cspD Yersinia pseudotuberculosis IP 32953 cold shock-like protein YP_069923.1 1658620 R 273123 CDS YP_069924.1 51595733 2953626 1659244..1659564 1 NC_006155.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1659564 clpS 2953626 clpS Yersinia pseudotuberculosis IP 32953 ATP-dependent Clp protease adaptor protein ClpS YP_069924.1 1659244 D 273123 CDS YP_069925.1 51595734 2955332 1659590..1661866 1 NC_006155.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 1661866 clpA 2955332 clpA Yersinia pseudotuberculosis IP 32953 ATP-dependent Clp protease ATP-binding subunit YP_069925.1 1659590 D 273123 CDS YP_069926.1 51595735 2955884 complement(1662279..1662497) 1 NC_006155.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1662497 infA 2955884 infA Yersinia pseudotuberculosis IP 32953 translation initiation factor IF-1 YP_069926.1 1662279 R 273123 CDS YP_069927.1 51595736 2955153 complement(1662663..1663373) 1 NC_006155.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1663373 aat 2955153 aat Yersinia pseudotuberculosis IP 32953 leucyl/phenylalanyl-tRNA--protein transferase YP_069927.1 1662663 R 273123 CDS YP_069928.1 51595737 2955391 complement(1663592..1665316) 1 NC_006155.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1665316 cydC 2955391 cydC Yersinia pseudotuberculosis IP 32953 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_069928.1 1663592 R 273123 CDS YP_069929.1 51595738 2955392 complement(1665319..1667103) 1 NC_006155.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1667103 cydD 2955392 cydD Yersinia pseudotuberculosis IP 32953 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_069929.1 1665319 R 273123 CDS YP_069930.1 51595739 2956837 complement(1667544..1668506) 1 NC_006155.1 similar to Yersinia pestis YPO1374 trxB; thioredoxin reductase (100% evalue=0); Escherichia coli ECs0973 thioredoxin reductase (85% evalue=1.E-156); thioredoxin reductase 1668506 trxB 2956837 trxB Yersinia pseudotuberculosis IP 32953 thioredoxin reductase YP_069930.1 1667544 R 273123 CDS YP_069931.1 51595740 2955971 1669274..1669768 1 NC_006155.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1669768 lrp 2955971 lrp Yersinia pseudotuberculosis IP 32953 leucine-responsive transcriptional regulator YP_069931.1 1669274 D 273123 CDS YP_069932.1 51595741 2955656 1669891..1673823 1 NC_006155.1 similar to Yersinia pestis YPO1376 ftsK; cell division protein (99% evalue=0); Salmonella typhi STY0958 ftsK; cell division protein FtsK (54.2% evalue=0); cell division protein 1673823 ftsK 2955656 ftsK Yersinia pseudotuberculosis IP 32953 cell division protein YP_069932.1 1669891 D 273123 CDS YP_069933.1 51595742 2955957 1674015..1674623 1 NC_006155.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1674623 lolA 2955957 lolA Yersinia pseudotuberculosis IP 32953 outer-membrane lipoprotein carrier protein YP_069933.1 1674015 D 273123 CDS YP_069934.1 51595743 2953627 1674634..1675977 1 NC_006155.1 similar to Yersinia pestis YPO1378 ATPase (99.7% evalue=0); Escherichia coli JW0875 ycaJ; Hypothetical protein (86.3% evalue=0); recombination factor protein RarA 1675977 2953627 YPTB1403 Yersinia pseudotuberculosis IP 32953 recombination factor protein RarA YP_069934.1 1674634 D 273123 CDS YP_069935.1 51595744 2956597 1676219..1677511 1 NC_006155.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1677511 serS 2956597 serS Yersinia pseudotuberculosis IP 32953 seryl-tRNA synthetase YP_069935.1 1676219 D 273123 CDS YP_069936.1 51595745 2953628 1677806..1678954 1 NC_006155.1 similar to Yersinia pestis YPO1380 membrane protein (100% evalue=0); Escherichia coli Z1244 ycaD; transport (65.9% evalue=1.E-149); MFS family transporter protein 1678954 2953628 YPTB1405 Yersinia pseudotuberculosis IP 32953 MFS family transporter protein YP_069936.1 1677806 D 273123 CDS YP_069937.1 51595746 2956239 complement(1679108..1679842) 1 NC_006155.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 1679842 pflA 2956239 pflA Yersinia pseudotuberculosis IP 32953 pyruvate formate lyase-activating enzyme 1 YP_069937.1 1679108 R 273123 CDS YP_069938.1 51595747 2953629 1680829..1681503 1 NC_006155.1 similar to Yersinia pestis YPO1382 hypothetical protein (100% evalue=1.E-131); hypothetical protein 1681503 2953629 YPTB1407 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069938.1 1680829 D 273123 CDS YP_069939.1 51595748 2956240 complement(1681621..1683903) 1 NC_006155.1 similar to Yersinia pestis YPO1383 pflB, pfl, YPO1383; formate acetyltransferase 1 (100% evalue=0); Escherichia coli JW0886 pflB; Formate c-acetyltransferase. (90.5% evalue=0); formate acetyltransferase 1 1683903 pflB 2956240 pflB Yersinia pseudotuberculosis IP 32953 formate acetyltransferase 1 YP_069939.1 1681621 R 273123 CDS YP_069940.1 51595749 2955629 complement(1683959..1684816) 1 NC_006155.1 similar to Yersinia pestis YPO1384 focA; formate transporter 1 (99.6% evalue=1.E-164); Escherichia coli JW0887 focA; probable formate transporter (82.4% evalue=1.E-137); formate transporter 1684816 focA 2955629 focA Yersinia pseudotuberculosis IP 32953 formate transporter YP_069940.1 1683959 R 273123 CDS YP_069941.1 51595750 2953630 complement(1685513..1687279) 1 NC_006155.1 similar to Yersinia pestis YPO1385 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0988 hypothetical protein (80.3% evalue=0); hypothetical protein 1687279 2953630 YPTB1410 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069941.1 1685513 R 273123 CDS YP_069942.1 51595751 2955196 1687428..1688465 1 NC_006155.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II 1688465 ansB 2955196 ansB Yersinia pseudotuberculosis IP 32953 L-asparaginase II YP_069942.1 1687428 D 273123 CDS YP_069943.1 51595752 2953631 1688784..1689878 1 NC_006155.1 similar to Yersinia pestis YPO1388 exported protein (37.6% evalue=1.E-57); hypothetical protein 1689878 2953631 YPTB1412 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069943.1 1688784 D 273123 CDS YP_069944.1 51595753 2953632 1689878..1691746 1 NC_006155.1 similar to Yersinia pestis YPO1388 exported protein (99% evalue=0); hypothetical protein 1691746 2953632 YPTB1413 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069944.1 1689878 D 273123 CDS YP_069945.1 51595754 2956596 1692113..1693198 1 NC_006155.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1693198 serC 2956596 serC Yersinia pseudotuberculosis IP 32953 phosphoserine aminotransferase YP_069945.1 1692113 D 273123 CDS YP_069946.1 51595755 2955221 1693376..1694662 1 NC_006155.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1694662 aroA 2955221 aroA Yersinia pseudotuberculosis IP 32953 3-phosphoshikimate 1-carboxyvinyltransferase YP_069946.1 1693376 D 273123 CDS YP_069947.1 51595756 2955342 1694976..1695668 1 NC_006155.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1695668 cmk 2955342 cmk Yersinia pseudotuberculosis IP 32953 cytidylate kinase YP_069947.1 1694976 D 273123 CDS YP_069948.1 51595757 2956530 1695842..1697515 1 NC_006155.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1697515 rpsA 2956530 rpsA Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S1 YP_069948.1 1695842 D 273123 CDS YP_069949.1 51595758 2955868 1697576..1697860 1 NC_006155.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 1697860 ihfB 2955868 ihfB Yersinia pseudotuberculosis IP 32953 integration host factor subunit beta YP_069949.1 1697576 D 273123 CDS YP_069950.1 51595759 2953633 1698393..1700684 1 NC_006155.1 similar to Yersinia pestis YPO1394 membrane protein (99.8% evalue=0); Escherichia coli ECs0996 hypothetical protein (41.8% evalue=1.E-168); hypothetical protein 1700684 2953633 YPTB1419 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069950.1 1698393 D 273123 CDS YP_069951.1 51595760 2956083 1700720..1702468 1 NC_006155.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding protein/permease 1702468 msbA 2956083 msbA Yersinia pseudotuberculosis IP 32953 lipid transporter ATP-binding protein/permease YP_069951.1 1700720 D 273123 CDS YP_069952.1 51595761 2955970 1702465..1703451 1 NC_006155.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1703451 lpxK 2955970 lpxK Yersinia pseudotuberculosis IP 32953 tetraacyldisaccharide 4'-kinase YP_069952.1 1702465 D 273123 CDS YP_069953.1 51595762 2953634 complement(1703459..1704904) 1 NC_006155.1 similar to Yersinia pestis YPO1397 conserved hypothetical protein (98.9% evalue=0); Sinorhizobium meliloti SMc04383 conserved hypothetical protein (51.5% evalue=1.E-133); hypothetical protein 1704904 2953634 YPTB1422 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069953.1 1703459 R 273123 CDS YP_069954.1 51595763 2955368 1705623..1705832 1 NC_006155.1 similar to Yersinia pestis YPO2595 cspE; cold shock protein (57.1% evalue=5.E-14); cold shock-like protein 1705832 cspB 2955368 cspB Yersinia pseudotuberculosis IP 32953 cold shock-like protein YP_069954.1 1705623 D 273123 CDS YP_069955.1 51595764 2953635 1706380..1706562 1 NC_006155.1 similar to Yersinia pestis YPO1399 conserved hypothetical protein (100% evalue=9.E-30); Salmonella typhimurium STM0987 ycaR; inner membrane protein (77.1% evalue=1.E-21); hypothetical protein 1706562 2953635 YPTB1424 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069955.1 1706380 D 273123 CDS YP_069956.1 51595765 2955919 1706559..1707311 1 NC_006155.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1707311 kdsB 2955919 kdsB Yersinia pseudotuberculosis IP 32953 3-deoxy-manno-octulosonate cytidylyltransferase YP_069956.1 1706559 D 273123 CDS YP_069957.1 51595766 2953636 1707674..1708567 1 NC_006155.1 similar to Yersinia pestis YPO1401 conserved hypothetical protein (99.3% evalue=1.E-171); Salmonella typhimurium STM0989 mukF protein (killing factor KicB) (54.3% evalue=2.E-93); hypothetical protein 1708567 2953636 YPTB1426 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069957.1 1707674 D 273123 CDS YP_069958.1 51595767 2956617 1709395..1710180 1 NC_006155.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 1710180 smtA 2956617 smtA Yersinia pseudotuberculosis IP 32953 metallothionein SmtA YP_069958.1 1709395 D 273123 CDS YP_069959.1 51595768 2956097 1710177..1711499 1 NC_006155.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1711499 mukF 2956097 mukF Yersinia pseudotuberculosis IP 32953 condesin subunit F YP_069959.1 1710177 D 273123 CDS YP_069960.1 51595769 2956096 1711507..1712208 1 NC_006155.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1712208 mukE 2956096 mukE Yersinia pseudotuberculosis IP 32953 condesin subunit E YP_069960.1 1711507 D 273123 CDS YP_069961.1 51595770 2956095 1712205..1716662 1 NC_006155.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1716662 mukB 2956095 mukB Yersinia pseudotuberculosis IP 32953 cell division protein MukB YP_069961.1 1712205 D 273123 CDS YP_069962.1 51595771 2953637 1716910..1718766 1 NC_006155.1 similar to Yersinia pestis YPO1407 exported protein (100% evalue=0); Salmonella typhi STY0997 ycbB; exported protein (59.3% evalue=0); hypothetical protein 1718766 2953637 YPTB1431 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069962.1 1716910 D 273123 CDS YP_069963.1 51595772 2953638 1718990..1719538 1 NC_006155.1 similar to Yersinia pestis YPO1408 exported protein (100% evalue=1.E-103); Salmonella typhimurium STM0996 ycbK; outer membrane protein (82.4% evalue=3.E-82); hypothetical protein 1719538 2953638 YPTB1432 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069963.1 1718990 D 273123 CDS YP_069964.1 51595773 2953639 1719599..1720246 1 NC_006155.1 similar to Yersinia pestis YPO1409 metallo-beta-lactamase superfamily protein (99.5% evalue=1.E-125); Escherichia coli ECs1010 hypothetical protein (71.1% evalue=5.E-94); metallo-beta-lactamase superfamily protein 1720246 2953639 YPTB1433 Yersinia pseudotuberculosis IP 32953 metallo-beta-lactamase superfamily protein YP_069964.1 1719599 D 273123 CDS YP_069965.1 51595774 2955248 complement(1720670..1721860) 1 NC_006155.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1721860 aspC 2955248 aspC Yersinia pseudotuberculosis IP 32953 aromatic amino acid aminotransferase YP_069965.1 1720670 R 273123 CDS YP_069966.1 51595775 2953640 complement(1722117..1723199) 1 NC_006155.1 similar to Yersinia pestis YPO1411 outer membrane porin C protein (93.6% evalue=0); Salmonella typhimurium STM1473 ompN; outer membrane protein N, non-specific porin (66.2% evalue=1.E-141); porin 1723199 2953640 YPTB1435 Yersinia pseudotuberculosis IP 32953 porin YP_069966.1 1722117 R 273123 CDS YP_069967.1 51595776 2955245 complement(1723497..1724897) 1 NC_006155.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1724897 asnC 2955245 asnC Yersinia pseudotuberculosis IP 32953 asparaginyl-tRNA synthetase YP_069967.1 1723497 R 273123 CDS YP_069968.1 51595777 2956289 complement(1725411..1726616) 1 NC_006155.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1726616 pncB 2956289 pncB Yersinia pseudotuberculosis IP 32953 nicotinate phosphoribosyltransferase YP_069968.1 1725411 R 273123 CDS YP_069969.1 51595778 2956233 1727332..1729947 1 NC_006155.1 similar to Yersinia pestis YPO1414 pepN; aminopeptidase N (99.6% evalue=0); Salmonella typhimurium STM1057 pepN; aminopeptidase N (77.5% evalue=0); aminopeptidase 1729947 pepN 2956233 pepN Yersinia pseudotuberculosis IP 32953 aminopeptidase YP_069969.1 1727332 D 273123 CDS YP_069970.1 51595779 2956386 1730592..1731602 1 NC_006155.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1731602 pyrD 2956386 pyrD Yersinia pseudotuberculosis IP 32953 dihydroorotate dehydrogenase 2 YP_069970.1 1730592 D 273123 CDS YP_069971.1 51595780 2953641 1731785..1732336 1 NC_006155.1 similar to Yersinia pestis YPO1416 conserved hypothetical protein (99.4% evalue=1.E-102); Salmonella typhi STY1080 conserved hypothetical protein (67.6% evalue=2.E-61); hypothetical protein 1732336 2953641 YPTB1440 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069971.1 1731785 D 273123 CDS YP_069972.1 51595781 2953642 complement(1732362..1733474) 1 NC_006155.1 similar to Yersinia pestis YPO1417 iron-sulfur binding protein (99.7% evalue=0); Escherichia coli Z1297 hypothetical protein (68.8% evalue=1.E-151); iron-sulfur binding protein 1733474 2953642 YPTB1441 Yersinia pseudotuberculosis IP 32953 iron-sulfur binding protein YP_069972.1 1732362 R 273123 CDS YP_069973.1 51595782 2953643 1733574..1735694 1 NC_006155.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1735694 rlmL 2953643 rlmL Yersinia pseudotuberculosis IP 32953 23S rRNA m(2)G2445 methyltransferase YP_069973.1 1733574 D 273123 CDS YP_069974.1 51595783 2956880 1735700..1737613 1 NC_006155.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1737613 uup 2956880 uup Yersinia pseudotuberculosis IP 32953 ABC transporter ATPase YP_069974.1 1735700 D 273123 CDS YP_069975.1 51595784 2956313 1737742..1739028 1 NC_006155.1 similar to Yersinia pestis YPO1420 pqiA; paraquat-inducible protein A (99.2% evalue=0); Escherichia coli JW0933 pqiA; Paraquat-inducible protein A (70.4% evalue=1.E-175); paraquat-inducible protein A 1739028 pqiA 2956313 pqiA Yersinia pseudotuberculosis IP 32953 paraquat-inducible protein A YP_069975.1 1737742 D 273123 CDS YP_069976.1 51595785 2956314 1739042..1740667 1 NC_006155.1 similar to Yersinia pestis YPO1421 pqiB; paraquat-inducible protein B (99.8% evalue=0); Salmonella typhi STY1085 pqiB; secreted protein (69.7% evalue=0); paraquat-inducible protein B 1740667 pqiB 2956314 pqiB Yersinia pseudotuberculosis IP 32953 paraquat-inducible protein B YP_069976.1 1739042 D 273123 CDS YP_069977.1 51595786 2953644 1740664..1741260 1 NC_006155.1 similar to Yersinia pestis YPO1422 lipoprotein protein (96.9% evalue=1.E-104); Salmonella typhi STY1086 lipoprotein (56% evalue=3.E-59); lipoprotein 1741260 2953644 YPTB1446 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_069977.1 1740664 D 273123 CDS YP_069978.1 51595787 2953645 1741309..1741449 1 NC_006155.1 similar to Yersinia pestis YPO1423 hypothetical protein, 100% identical; hypothetical protein 1741449 2953645 YPTB1447 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069978.1 1741309 D 273123 CDS YP_069979.1 51595788 2956465 1741530..1741697 1 NC_006155.1 similar to Yersinia pestis YPO1423a rmf; ribosome modulation factor (100% evalue=2.E-26); Salmonella typhimurium STM1066 rmf; ribosome modulation factor (involved in dimerization of 70S ribosomes) (81.8% evalue=4.E-21); ribosome modulation factor 1741697 rmf 2956465 rmf Yersinia pseudotuberculosis IP 32953 ribosome modulation factor YP_069979.1 1741530 D 273123 CDS YP_069980.1 51595789 2955517 complement(1741759..1743033) 1 NC_006155.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1743033 fabF2 2955517 fabF2 Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP synthase YP_069980.1 1741759 R 273123 CDS YP_069981.1 51595790 2955513 complement(1743733..1744251) 1 NC_006155.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1744251 fabA 2955513 fabA Yersinia pseudotuberculosis IP 32953 3-hydroxydecanoyl-ACP dehydratase YP_069981.1 1743733 R 273123 CDS YP_069982.1 51595791 2953646 complement(1744320..1746092) 1 NC_006155.1 similar to Yersinia pestis YPO1431 Lon protease (99.8% evalue=0); Escherichia coli JW0938 Lon protease (lon) homolog (57.9% evalue=0); Lon protease 1746092 2953646 YPTB1451 Yersinia pseudotuberculosis IP 32953 Lon protease YP_069982.1 1744320 R 273123 CDS YP_069983.1 51595792 2953647 1746282..1746737 1 NC_006155.1 similar to Yersinia pestis YPO1433 conserved hypothetical protein (100% evalue=3.E-82); Escherichia coli b0956 ycbG; hypothetical 17.7 kD protein in fabA-ompA intergenic region (80% evalue=1.E-64); hypothetical protein 1746737 2953647 YPTB1452 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069983.1 1746282 D 273123 CDS YP_069984.1 51595793 2956188 complement(1746843..1747904) 1 NC_006155.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein OmpA 1747904 ompA 2956188 ompA Yersinia pseudotuberculosis IP 32953 outer membrane protein OmpA YP_069984.1 1746843 R 273123 CDS YP_069985.1 51595794 2956652 complement(1748262..1748768) 1 NC_006155.1 similar to Yersinia pestis YPO1436 sulA, sfiA; cell division inhibitor (99.4% evalue=7.E-93); Escherichia coli b0958 sulA, sfiA; cell division inhibitor (60.5% evalue=1.E-41); SOS cell division inhibitor 1748768 sulA 2956652 sulA Yersinia pseudotuberculosis IP 32953 SOS cell division inhibitor YP_069985.1 1748262 R 273123 CDS YP_069986.1 51595795 2953648 1748997..1749632 1 NC_006155.1 similar to Yersinia pestis YPO1437 conserved hypothetical protein (100% evalue=1.E-117); Escherichia coli b0959 hypothetical protein (44.6% evalue=7.E-34); hypothetical protein 1749632 2953648 YPTB1455 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069986.1 1748997 D 273123 CDS YP_069987.1 51595796 2953649 complement(1749734..1751872) 1 NC_006155.1 similar to Yersinia pestis YPO1438 membrane protein (99.4% evalue=0); Salmonella typhi STY1095 membrane protein (71.7% evalue=0); efflux transporter (PET) family protein 1751872 2953649 YPTB1456 Yersinia pseudotuberculosis IP 32953 efflux transporter (PET) family protein YP_069987.1 1749734 R 273123 CDS YP_069988.1 51595797 2953650 complement(1751902..1752348) 1 NC_006155.1 similar to Yersinia pestis YPO1439 membrane protein (99.3% evalue=2.E-81); Escherichia coli b0961 yccF; hypothetical 16.3 kD protein in sulA-helD intergenic region (78% evalue=6.E-63); hypothetical protein 1752348 2953650 YPTB1457 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069988.1 1751902 R 273123 CDS YP_069989.1 51595798 2953651 1752542..1754596 1 NC_006155.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1754596 helD 2953651 helD Yersinia pseudotuberculosis IP 32953 DNA helicase IV YP_069989.1 1752542 D 273123 CDS YP_069990.1 51595799 2956036 complement(1754657..1755121) 1 NC_006155.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1755121 mgsA 2956036 mgsA Yersinia pseudotuberculosis IP 32953 methylglyoxal synthase YP_069990.1 1754657 R 273123 CDS YP_069991.1 51595800 2953652 complement(1755300..1755980) 1 NC_006155.1 similar to Yersinia pestis YPO1442 exported protein (100% evalue=1.E-127); Escherichia coli ECs1048 hypothetical protein (36.2% evalue=4.E-34); hypothetical protein 1755980 2953652 YPTB1460 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069991.1 1755300 R 273123 CDS YP_069992.1 51595801 2953653 1756296..1756712 1 NC_006155.1 similar to Yersinia pestis YPO1443 conserved hypothetical protein (100% evalue=2.E-73); Salmonella typhi STY1101 conserved hypothetical protein (72.2% evalue=1.E-51); hypothetical protein 1756712 2953653 YPTB1461 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069992.1 1756296 D 273123 CDS YP_069993.1 51595802 2953654 complement(1756821..1757162) 1 NC_006155.1 similar to Yersinia pestis YPO1444 conserved hypothetical protein (100% evalue=2.E-57); Salmonella typhi STY1102 conserved hypothetical protein (79% evalue=8.E-43); heat shock protein HspQ 1757162 2953654 YPTB1462 Yersinia pseudotuberculosis IP 32953 heat shock protein HspQ YP_069993.1 1756821 R 273123 CDS YP_069994.1 51595803 2953655 complement(1757199..1758389) 1 NC_006155.1 similar to Yersinia pestis YPO1445 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0950 yccW; Hypothetical protein (80.5% evalue=0); hypothetical protein 1758389 2953655 YPTB1463 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069994.1 1757199 R 273123 CDS YP_069995.1 51595804 2953656 1758483..1758761 1 NC_006155.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1758761 2953656 YPTB1464 Yersinia pseudotuberculosis IP 32953 acylphosphatase YP_069995.1 1758483 D 273123 CDS YP_069996.1 51595805 2953657 complement(1758813..1759139) 1 NC_006155.1 similar to Yersinia pestis YPO1447 sulfite reductase subunit protein (99% evalue=4.E-58); Escherichia coli ECs1053 sulfite reductase (80.7% evalue=4.E-46); sulfite reductase subunit protein 1759139 2953657 YPTB1465 Yersinia pseudotuberculosis IP 32953 sulfite reductase subunit protein YP_069996.1 1758813 R 273123 CDS YP_069997.1 51595806 2953660 complement(1762466..1764883) 1 NC_006155.1 similar to Yersinia pestis YPO1451 oxidoreductase (99.7% evalue=0); Mycobacterium tuberculosis_CDC1551MT1824 oxidoreductase, FAD-binding (31.8% evalue=1.E-47); oxidoreductase 1764883 2953660 YPTB1469 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_069997.1 1762466 R 273123 CDS YP_069998.1 51595807 2953661 complement(1765037..1765783) 1 NC_006155.1 similar to Yersinia pestis YPO1452 short chain dehydrogenase (100% evalue=1.E-136); Mesorhizobium loti mlr7055 probable dehydrogenase (44% evalue=7.E-53); short chain dehydrogenase 1765783 2953661 YPTB1470 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_069998.1 1765037 R 273123 CDS YP_069999.1 51595808 2953662 1766412..1766732 1 NC_006155.1 similar to Yersinia pestis YPO1453 hypothetical protein (100% evalue=1.E-58); hypothetical protein 1766732 2953662 YPTB1471 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_069999.1 1766412 D 273123 CDS YP_070000.1 51595809 2953663 1767062..1767520 1 NC_006155.1 similar to Yersinia pestis YPO1454 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase (99.3% evalue=4.E-84); C. pneumoniae_J138 fabZ myristoyl-acyl carrier dehydratase (35% evalue=5.E-14); (3R)-hydroxymyristoyl-ACP dehydratase 1767520 2953663 YPTB1472 Yersinia pseudotuberculosis IP 32953 (3R)-hydroxymyristoyl-ACP dehydratase YP_070000.1 1767062 D 273123 CDS YP_070001.1 51595810 2953664 1767510..1768793 1 NC_006155.1 similar to Yersinia pestis YPO1455 beta-ketoacyl-[acyl-carrier-protein] synthase (99.2% evalue=0); Neisseria meningitidis NMB0219 3-oxoacyl-(acyl-carrier-protein) synthase II (33.4% evalue=1.E-58); 3-ketoacyl-ACP synthase 1768793 2953664 YPTB1473 Yersinia pseudotuberculosis IP 32953 3-ketoacyl-ACP synthase YP_070001.1 1767510 D 273123 CDS YP_070002.1 51595811 2953665 1768786..1769532 1 NC_006155.1 similar to Yersinia pestis YPO1456 beta-ketoacyl-[acyl-carrier-protein] reductase (99.5% evalue=1.E-138); B. halodurans BH2491 fabG; 3-oxoacyl-(acyl-carrier protein) reductase (35.7% evalue=5.E-36); 3-ketoacyl-ACP reductase 1769532 2953665 YPTB1474 Yersinia pseudotuberculosis IP 32953 3-ketoacyl-ACP reductase YP_070002.1 1768786 D 273123 CDS YP_070003.1 51595812 2953666 1769548..1770786 1 NC_006155.1 similar to Yersinia pestis YPO1457 hydroxymethylglutaryl-coenzyme A synthase (100% evalue=0); Bacillus subtilis BG10926 pksG; polyketide biosynthesis protein pksG (34.4% evalue=8.E-56); hydroxymethylglutaryl-CoA synthase 1770786 2953666 YPTB1475 Yersinia pseudotuberculosis IP 32953 hydroxymethylglutaryl-CoA synthase YP_070003.1 1769548 D 273123 CDS YP_070004.1 51595813 2953667 1770779..1771498 1 NC_006155.1 similar to Yersinia pestis YPO1458 enoyl-CoA hydratase (100% evalue=1.E-133); Ralstonia solanacearum RS03234 enoyl-CoA hydratase (25.7% evalue=4.E-14); enoyl-CoA hydratase 1771498 2953667 YPTB1476 Yersinia pseudotuberculosis IP 32953 enoyl-CoA hydratase YP_070004.1 1770779 D 273123 CDS YP_070005.1 51595814 2953668 1771491..1772252 1 NC_006155.1 involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1772252 2953668 YPTB1477 Yersinia pseudotuberculosis IP 32953 polyketide biosynthesis enoyl-CoA hydratase YP_070005.1 1771491 D 273123 CDS YP_070006.1 51595815 2953669 1772255..1773043 1 NC_006155.1 similar to Yersinia pestis YPO1460 short chain dehydrogenase (100% evalue=1.E-150); Thermoplasma volcanium TVG1417421 3-oxoacyl-acyl carrier protein reductase (27.9% evalue=2.E-15); 3-oxoacyl-ACP reductase 1773043 2953669 YPTB1478 Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP reductase YP_070006.1 1772255 D 273123 CDS YP_070007.1 51595816 2953670 1773130..1773570 1 NC_006155.1 similar to Yersinia pestis YPO1461 hypothetical protein (100% evalue=3.E-83); hypothetical protein 1773570 2953670 YPTB1479 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070007.1 1773130 D 273123 CDS YP_070008.1 51595817 2953671 1773608..1773856 1 NC_006155.1 similar to Yersinia pestis YPO1462 acyl carrier protein (100% evalue=6.E-39); acyl carrier protein 1773856 2953671 YPTB1480 Yersinia pseudotuberculosis IP 32953 acyl carrier protein YP_070008.1 1773608 D 273123 CDS YP_070009.1 51595818 2953672 1773955..1774803 1 NC_006155.1 similar to Yersinia pestis YPO1463 acyl transferase (100% evalue=1.E-158); Bacillus subtilis BG12649 pksC; involved in polyketide synthesis (45% evalue=2.E-60); acyl transferase 1774803 2953672 YPTB1481 Yersinia pseudotuberculosis IP 32953 acyl transferase YP_070009.1 1773955 D 273123 CDS YP_070010.1 51595819 2953673 1774960..1775127 1 NC_006155.1 similar to Yersinia pestis YPO1464 hypothetical protein, 100% identical; hypothetical protein 1775127 2953673 YPTB1482 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070010.1 1774960 D 273123 CDS YP_070011.1 51595820 2953674 1775792..1776292 1 NC_006155.1 similar to Yersinia pestis YPO1465 conserved hypothetical protein (97.5% evalue=5.E-86); hypothetical protein 1776292 2953674 YPTB1483 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070011.1 1775792 D 273123 CDS YP_070012.1 51595821 2953675 1776335..1777885 1 NC_006155.1 similar to Yersinia pestis YPO1466 conserved hypothetical protein (99.8% evalue=0); hypothetical protein 1777885 2953675 YPTB1484 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070012.1 1776335 D 273123 CDS YP_070013.1 51595822 2953676 1777897..1779249 1 NC_006155.1 similar to Yersinia pestis YPO1467 conserved hypothetical protein (99.1% evalue=0); hypothetical protein 1779249 2953676 YPTB1485 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070013.1 1777897 D 273123 CDS YP_070014.1 51595823 2953677 1779246..1779932 1 NC_006155.1 similar to Yersinia pestis YPO1468 membrane protein (99.1% evalue=1.E-132); hypothetical protein 1779932 2953677 YPTB1486 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070014.1 1779246 D 273123 CDS YP_070015.1 51595824 2953678 1779932..1781668 1 NC_006155.1 similar to Yersinia pestis YPO1469 exported protein (100% evalue=0); OmpA family outer membrane protein 1781668 2953678 YPTB1487 Yersinia pseudotuberculosis IP 32953 OmpA family outer membrane protein YP_070015.1 1779932 D 273123 CDS YP_070016.1 51595825 2953679 1781672..1782163 1 NC_006155.1 similar to Yersinia pestis YPO1470 conserved hypothetical protein (100% evalue=5.E-93); hypothetical protein 1782163 2953679 YPTB1488 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070016.1 1781672 D 273123 CDS YP_070017.1 51595826 2955336 1782551..1785199 1 NC_006155.1 similar to Yersinia pestis YPO1471 ATPase subunit of ATP-dependent protease (95.6% evalue=0); Clp ATPase 1785199 clpB3 2955336 clpB3 Yersinia pseudotuberculosis IP 32953 Clp ATPase YP_070017.1 1782551 D 273123 CDS YP_070018.1 51595827 2953680 1785196..1787694 1 NC_006155.1 similar to Yersinia pestis YPO1472 conserved hypothetical protein (96.2% evalue=0); hypothetical protein 1787694 2953680 YPTB1490 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070018.1 1785196 D 273123 CDS YP_070019.1 51595828 2953681 1787812..1789083 1 NC_006155.1 hypothetical protein 1789083 2953681 YPTB1491 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070019.1 1787812 D 273123 CDS YP_070020.1 51595829 2953682 1789090..1789482 1 NC_006155.1 similar to Yersinia pestis YPO0982 lipoprotein (77.6% evalue=1.E-55); lipoprotein 1789482 2953682 YPTB1492 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070020.1 1789090 D 273123 CDS YP_070021.1 51595830 2953683 1789798..1792500 1 NC_006155.1 similar to Yersinia pestis YPO1472 conserved hypothetical protein (93.6% evalue=0); hypothetical protein 1792500 2953683 YPTB1493 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070021.1 1789798 D 273123 CDS YP_070022.1 51595831 2953684 1792503..1792919 1 NC_006155.1 similar to Salmonella typhi STY3343 exported protein (33% evalue=3.E-10); hypothetical protein 1792919 2953684 YPTB1494 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070022.1 1792503 D 273123 CDS YP_070023.1 51595832 2953685 1792928..1794676 1 NC_006155.1 LysM domain-containing protein 1794676 2953685 YPTB1495 Yersinia pseudotuberculosis IP 32953 LysM domain-containing protein YP_070023.1 1792928 D 273123 CDS YP_070024.1 51595833 2953686 1794681..1795193 1 NC_006155.1 similar to Salmonella typhi STY3285 exported protein (41.1% evalue=7.E-35); hypothetical protein 1795193 2953686 YPTB1496 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070024.1 1794681 D 273123 CDS YP_070025.1 51595834 2953687 1796147..1797205 1 NC_006155.1 similar to Yersinia pestis YPO1481 hypothetical protein (98.6% evalue=0); hypothetical protein 1797205 2953687 YPTB1497 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070025.1 1796147 D 273123 CDS YP_070026.1 51595835 2953688 1797202..1800624 1 NC_006155.1 similar to Yersinia pestis YPO1482 membrane protein (99.3% evalue=0); Ralstonia solanacearum RS01945 probable transmembrane protein (23.6% evalue=1.E-39); hypothetical protein 1800624 2953688 YPTB1498 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070026.1 1797202 D 273123 CDS YP_070027.1 51595836 2953689 1800668..1802269 1 NC_006155.1 similar to Yersinia pestis YPO1483 hypothetical protein (98.8% evalue=0); Pseudomonas aeruginosa PA1656 hypothetical protein (25.5% evalue=2.E-23); hypothetical protein 1802269 2953689 YPTB1499 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070027.1 1800668 D 273123 CDS YP_070028.1 51595837 2953690 1802287..1803345 1 NC_006155.1 similar to Yersinia pestis YPO1484 hypothetical protein (99.7% evalue=0); hypothetical protein 1803345 2953690 YPTB1500 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070028.1 1802287 D 273123 CDS YP_070029.1 51595838 2953691 1803345..1803815 1 NC_006155.1 hypothetical protein 1803815 2953691 YPTB1501 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070029.1 1803345 D 273123 CDS YP_070030.1 51595839 2953692 1804036..1805799 1 NC_006155.1 similar to Yersinia pestis YPO1485 conserved hypothetical protein (99.4% evalue=0); Vibrio cholerae VCA0110 hypothetical protein (30.3% evalue=4.E-67); hypothetical protein 1805799 2953692 YPTB1502 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070030.1 1804036 D 273123 CDS YP_070031.1 51595840 2953693 1805763..1806848 1 NC_006155.1 similar to Yersinia pestis YPO1486 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0228 hypothetical protein (30% evalue=3.E-27); hypothetical protein 1806848 2953693 YPTB1503 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070031.1 1805763 D 273123 CDS YP_070032.1 51595841 2953694 1806724..1807425 1 NC_006155.1 similar to Yersinia pestis YPO1487 conserved hypothetical protein (98.7% evalue=4.E-86); Salmonella typhimurium STM0280 outer membrane lipoprotein (28.3% evalue=2.E-11); hypothetical protein 1807425 2953694 YPTB1504 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070032.1 1806724 D 273123 CDS YP_070033.1 51595842 2953695 1807425..1807877 1 NC_006155.1 similar to Yersinia pestis YPO1488 conserved hypothetical protein (99.3% evalue=2.E-81); hypothetical protein 1807877 2953695 YPTB1505 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070033.1 1807425 D 273123 CDS YP_070034.1 51595843 2953696 1807902..1809269 1 NC_006155.1 similar to Yersinia pestis YPO1489 hypothetical protein (97.1% evalue=0); Escherichia coli ECs0217 hypothetical protein (30.7% evalue=2.E-50); hypothetical protein 1809269 2953696 YPTB1506 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070034.1 1807902 D 273123 CDS YP_070035.1 51595844 2953697 complement(1809481..1810104) 1 NC_006155.1 similar to Yersinia pestis YPO1492 hypothetical protein (30.7% evalue=3.E-10); hypothetical protein 1810104 2953697 YPTB1507 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070035.1 1809481 R 273123 CDS YP_070036.1 51595845 2956967 1810619..1812382 1 NC_006155.1 similar to Yersinia pestis YPO1491 ybiT; ABC transporter ATP-binding protein (99.6% evalue=0); ABC transporter ATP-binding protein 1812382 ybiT 2956967 ybiT Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_070036.1 1810619 D 273123 CDS YP_070037.1 51595846 2953698 1812610..1813257 1 NC_006155.1 similar to Yersinia pestis YPO1492 hypothetical protein (93.9% evalue=1.E-113); hypothetical protein 1813257 2953698 YPTB1509 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070037.1 1812610 D 273123 CDS YP_070038.1 51595847 2956065 complement(1813329..1814099) 1 NC_006155.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 1814099 moeB 2956065 moeB Yersinia pseudotuberculosis IP 32953 molybdopterin biosynthesis protein MoeB YP_070038.1 1813329 R 273123 CDS YP_070039.1 51595848 2955372 complement(1814101..1815375) 1 NC_006155.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 1815375 cspD 2955372 cspD Yersinia pseudotuberculosis IP 32953 molybdopterin biosynthesis protein MoeA YP_070039.1 1814101 R 273123 CDS YP_070040.1 51595849 2953699 complement(1815910..1817220) 1 NC_006155.1 similar to Yersinia pestis YPO1496 heme-binding protein (99.7% evalue=0); Salmonella typhimurium STM0036 arylsulfatase regulatory protein (25.8% evalue=3.E-29); heme-binding protein 1817220 2953699 YPTB1512 Yersinia pseudotuberculosis IP 32953 heme-binding protein YP_070040.1 1815910 R 273123 CDS YP_070041.1 51595850 2953700 complement(1817230..1817898) 1 NC_006155.1 similar to Yersinia pestis YPO1497 ABC transporter ATP-binding protein (99% evalue=1.E-120); Bacillus subtilis BG13245 yknY; ABC transport system ATP-binding protein (47.2% evalue=6.E-53); ABC transporter ATP-binding protein 1817898 2953700 YPTB1513 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_070041.1 1817230 R 273123 CDS YP_070042.1 51595851 2953701 complement(1817900..1819162) 1 NC_006155.1 similar to Yersinia pestis YPO1498 exported protein (98.3% evalue=0); A. aeolicus aq_294 protein (21.6% evalue=6.E-12); hypothetical protein 1819162 2953701 YPTB1514 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070042.1 1817900 R 273123 CDS YP_070043.1 51595852 2953702 complement(1819164..1821524) 1 NC_006155.1 similar to Yersinia pestis YPO1499 membrane protein (98.6% evalue=0); hypothetical protein 1821524 2953702 YPTB1515 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070043.1 1819164 R 273123 CDS YP_070044.1 51595853 2953703 complement(1822077..1822919) 1 NC_006155.1 similar to Yersinia pestis YPO1501 esterase (99.2% evalue=1.E-167); Escherichia coli JW2141 yeiG; esterase (73.5% evalue=1.E-124); esterase 1822919 2953703 YPTB1516 Yersinia pseudotuberculosis IP 32953 esterase YP_070044.1 1822077 R 273123 CDS YP_070045.1 51595854 2953704 complement(1822940..1824079) 1 NC_006155.1 similar to Yersinia pestis YPO1502 probable alcohol dehydrogenase / formaldehyde dehydrogenase (glutathione) (99.7% evalue=0); Pseudomonas aeruginosa PA3629 adhC; alcohol dehydrogenase class III (78.9% evalue=1.E-175); alcohol dehydrogenase 1824079 2953704 YPTB1517 Yersinia pseudotuberculosis IP 32953 alcohol dehydrogenase YP_070045.1 1822940 R 273123 CDS YP_070046.1 51595855 2953705 complement(1824352..1825221) 1 NC_006155.1 similar to Yersinia pestis YPO1503 LysR-family transcriptional regulatory protein (100% evalue=1.E-164); Pseudomonas aeruginosa PA1413 probable transcriptional regulator (53.7% evalue=1.E-79); LysR family transcriptional regulator 1825221 2953705 YPTB1518 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_070046.1 1824352 R 273123 CDS YP_070047.1 51595856 2953706 1825357..1826508 1 NC_006155.1 similar to Yersinia pestis YPO1504 exported protein (100% evalue=0); Pseudomonas aeruginosa PA1412 hypothetical protein (45.8% evalue=8.E-79); major facilitator superfamily transporter 1826508 2953706 YPTB1519 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily transporter YP_070047.1 1825357 D 273123 CDS YP_070048.1 51595857 2955634 1826650..1827354 1 NC_006155.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1827354 folE 2955634 folE Yersinia pseudotuberculosis IP 32953 GTP cyclohydrolase I YP_070048.1 1826650 D 273123 CDS YP_070049.1 51595858 2957011 1827400..1828575 1 NC_006155.1 similar to Yersinia pestis YPO1506 yeiB; exported protein (99.4% evalue=0); Escherichia coli ECs3044 hypothetical protein (60.6% evalue=1.E-140); hypothetical protein 1828575 yeiB 2957011 yeiB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070049.1 1827400 D 273123 CDS YP_070050.1 51595859 2956034 1829323..1830315 1 NC_006155.1 similar to Yersinia pestis YPO1507 mglB; galactose-binding protein (98.5% evalue=0); Salmonella typhimurium STM2190 mglB; D-galactose-binding periplasmic protein (85.4% evalue=1.E-163); galactose ABC transporter substrate-binding protein 1830315 mglB 2956034 mglB Yersinia pseudotuberculosis IP 32953 galactose ABC transporter substrate-binding protein YP_070050.1 1829323 D 273123 CDS YP_070051.1 51595860 2956032 1830545..1832065 1 NC_006155.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 1832065 mglA 2956032 mglA Yersinia pseudotuberculosis IP 32953 galactose/methyl galaxtoside transporter ATP-binding protein YP_070051.1 1830545 D 273123 CDS YP_070052.1 51595861 2956035 1832086..1833096 1 NC_006155.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 1833096 mglC 2956035 mglC Yersinia pseudotuberculosis IP 32953 beta-methylgalactoside transporter inner membrane protein YP_070052.1 1832086 D 273123 CDS YP_070053.1 51595862 2956565 complement(1833541..1834278) 1 NC_006155.1 similar to Yersinia pestis YPO1510 sanA; exported protein (100% evalue=1.E-138); Escherichia coli Z3399 sanA; vancomycin sensitivity (80% evalue=1.E-112); hypothetical protein 1834278 sanA 2956565 sanA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070053.1 1833541 R 273123 CDS YP_070054.1 51595863 2956599 complement(1834559..1836256) 1 NC_006155.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1836256 sfcA 2956599 sfcA Yersinia pseudotuberculosis IP 32953 malate dehydrogenase YP_070054.1 1834559 R 273123 CDS YP_070055.1 51595864 2955314 complement(1836612..1837496) 1 NC_006155.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1837496 cdd 2955314 cdd Yersinia pseudotuberculosis IP 32953 cytidine deaminase YP_070055.1 1836612 R 273123 CDS YP_070056.1 51595865 2957103 complement(1837822..1838517) 1 NC_006155.1 similar to Yersinia pestis YPO1513 yohK; membrane protein (99.5% evalue=1.E-126); Escherichia coli JW2130 yohK; Hypothetical protein (76.1% evalue=3.E-99); hypothetical protein 1838517 yohK 2957103 yohK Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070056.1 1837822 R 273123 CDS YP_070057.1 51595866 2957102 complement(1838514..1838921) 1 NC_006155.1 similar to Yersinia pestis YPO1514 yohJ; membrane protein (100% evalue=1.E-73); Salmonella typhimurium STM2181 yohJ; effector of murein hydrolase LrgA (68% evalue=2.E-45); hypothetical protein 1838921 yohJ 2957102 yohJ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070057.1 1838514 R 273123 CDS YP_070058.1 51595867 2953707 complement(1839163..1840344) 1 NC_006155.1 similar to Yersinia pestis YPO1515 multidrug resistance protein (100% evalue=0); Salmonella typhimurium STM1516 ydeE; MFS family transport protein (40.8% evalue=2.E-76); MFS multidrug efflux pump 1840344 2953707 YPTB1530 Yersinia pseudotuberculosis IP 32953 MFS multidrug efflux pump YP_070058.1 1839163 R 273123 CDS YP_070059.1 51595868 2953708 complement(1840695..1841948) 1 NC_006155.1 similar to Yersinia pestis YPO1516 hypothetical protein (99.7% evalue=0); hypothetical protein 1841948 2953708 YPTB1531 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070059.1 1840695 R 273123 CDS YP_070060.1 51595869 2953709 complement(1841966..1843042) 1 NC_006155.1 similar to Yersinia pestis YPO1517 sugar ABC transporter (100% evalue=0); Mesorhizobium loti mlr7288 ABC transporter binding protein (31.1% evalue=6.E-34); sugar ABC transporter 1843042 2953709 YPTB1532 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter YP_070060.1 1841966 R 273123 CDS YP_070061.1 51595870 2953710 1843576..1844406 1 NC_006155.1 similar to Yersinia pestis YPO1518 membrane protein (99.4% evalue=3.E-99); hypothetical protein 1844406 2953710 YPTB1533 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070061.1 1843576 D 273123 CDS YP_070062.1 51595871 2956025 complement(1844535..1846562) 1 NC_006155.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1846562 metG 2956025 metG Yersinia pseudotuberculosis IP 32953 methionyl-tRNA synthetase YP_070062.1 1844535 R 273123 CDS YP_070063.1 51595872 2953711 1846827..1847939 1 NC_006155.1 similar to Yersinia pestis YPO1523 conserved hypothetical protein (100% evalue=0); Escherichia coli JW2100 mrp; Mrp protein. (76.7% evalue=1.E-166); ATPase 1847939 2953711 YPTB1535 Yersinia pseudotuberculosis IP 32953 ATPase YP_070063.1 1846827 D 273123 CDS YP_070064.1 51595873 2956857 1848184..1848825 1 NC_006155.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1848825 udk 2956857 udk Yersinia pseudotuberculosis IP 32953 uridine kinase YP_070064.1 1848184 D 273123 CDS YP_070065.1 51595874 2955433 1848930..1849511 1 NC_006155.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1849511 dcd 2955433 dcd Yersinia pseudotuberculosis IP 32953 deoxycytidine triphosphate deaminase YP_070065.1 1848930 D 273123 CDS YP_070066.1 51595875 2953712 1849698..1851554 1 NC_006155.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein 1851554 2953712 YPTB1538 Yersinia pseudotuberculosis IP 32953 assembly protein YP_070066.1 1849698 D 273123 CDS YP_070067.1 51595876 2953713 complement(1851699..1853285) 1 NC_006155.1 similar to Yersinia pestis YPO1527 membrane protein (99.8% evalue=0); Salmonella typhimurium STM2119 yegH; inner membrane protein (72.1% evalue=0); CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps 1853285 2953713 YPTB1539 Yersinia pseudotuberculosis IP 32953 CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps YP_070067.1 1851699 R 273123 CDS YP_070068.1 51595877 2953714 1853727..1854506 1 NC_006155.1 similar to Yersinia pestis YPO1528 ferric iron reductase (98.8% evalue=1.E-154); Escherichia coli b4367 fhuF; ferric hydroxamate transport protein fhuF (38.6% evalue=1.E-41); ferric hydroximate transport ferric iron reductase 1854506 2953714 YPTB1540 Yersinia pseudotuberculosis IP 32953 ferric hydroximate transport ferric iron reductase YP_070068.1 1853727 D 273123 CDS YP_070069.1 51595878 2953715 1854657..1856204 1 NC_006155.1 similar to Yersinia pestis YPO1529 decarboxylase (99.2% evalue=0); Anabaena all0395 L-2,4-diaminobutyrate decarboxylase (42.8% evalue=1.E-106); decarboxylase 1856204 2953715 YPTB1541 Yersinia pseudotuberculosis IP 32953 decarboxylase YP_070069.1 1854657 D 273123 CDS YP_070070.1 51595879 2955184 1856239..1857537 1 NC_006155.1 similar to Yersinia pestis YPO1530 alcA; siderophore biosynthetic enzyme (100% evalue=0); Anabaena all0392 probable monooxygenase (46% evalue=1.E-110); siderophore biosynthetic enzyme 1857537 alcA 2955184 alcA Yersinia pseudotuberculosis IP 32953 siderophore biosynthetic enzyme YP_070070.1 1856239 D 273123 CDS YP_070071.1 51595880 2955185 1857537..1858115 1 NC_006155.1 similar to Yersinia pestis YPO1531 alcB; siderophore biosynthetic enzyme (100% evalue=1.E-112); Anabaena all0393 hypothetical protein (25.6% evalue=2.E-17); siderophore biosynthetic enzyme 1858115 alcB 2955185 alcB Yersinia pseudotuberculosis IP 32953 siderophore biosynthetic enzyme YP_070071.1 1857537 D 273123 CDS YP_070072.1 51595881 2955186 1858112..1859956 1 NC_006155.1 similar to Yersinia pestis YPO1538 siderophore biosynthetic enzyme (46.8% evalue=1.E-157); siderophore biosynthetic enzyme 1859956 alcC 2955186 alcC Yersinia pseudotuberculosis IP 32953 siderophore biosynthetic enzyme YP_070072.1 1858112 D 273123 CDS YP_070073.1 51595882 2953716 complement(1860083..1860931) 1 NC_006155.1 similar to Yersinia pestis YPO1533 iron-siderophore transport system, ATP-binding component (99.6% evalue=1.E-156); Agrobacterium tumefaciens Atu5316 fepC; ABC transporter, nucleotide binding/ATPase [iron-siderophore] (53.7% evalue=3.E-75); iron-siderophore ABC transporter ATP-binding protein 1860931 2953716 YPTB1545 Yersinia pseudotuberculosis IP 32953 iron-siderophore ABC transporter ATP-binding protein YP_070073.1 1860083 R 273123 CDS YP_070074.1 51595883 2953717 complement(1860928..1861968) 1 NC_006155.1 similar to Yersinia pestis YPO1534 iron-siderophore transport system, membrane permease component (100% evalue=0); Pseudomonas aeruginosa PA4161 fepG; ferric enterobactin transport system permease (37.9% evalue=7.E-45); iron-siderophore ABC transporter permease 1861968 2953717 YPTB1546 Yersinia pseudotuberculosis IP 32953 iron-siderophore ABC transporter permease YP_070074.1 1860928 R 273123 CDS YP_070075.1 51595884 2953718 complement(1861955..1862995) 1 NC_006155.1 similar to Yersinia pestis YPO1535 iron-siderophore transport system, transmembrane component (99.7% evalue=0); Escherichia coli Z0732 fepD; ferric enterobactin (enterochelin) transport (42.9% evalue=9.E-61); iron-siderophore ABC transporter permease 1862995 2953718 YPTB1547 Yersinia pseudotuberculosis IP 32953 iron-siderophore ABC transporter permease YP_070075.1 1861955 R 273123 CDS YP_070076.1 51595885 2953719 complement(1862992..1864071) 1 NC_006155.1 similar to Yersinia pestis YPO1536 iron-siderophore transport system, periplasmic binding protein (99.7% evalue=0); Agrobacterium tumefaciens AGR_pAT_447 DtxR/iron regulated lipoprotein precursor (34.1% evalue=1.E-43); iron-siderophore ABC transporter substrate-binding protein 1864071 2953719 YPTB1548 Yersinia pseudotuberculosis IP 32953 iron-siderophore ABC transporter substrate-binding protein YP_070076.1 1862992 R 273123 CDS YP_070077.1 51595886 2953720 complement(1864161..1866422) 1 NC_006155.1 similar to Yersinia pestis YPO1537 iron-siderophore receptor (99.7% evalue=0); Salmonella typhimurium STM1204 fhuE; outer membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid uptake (36.9% evalue=1.E-128); OMR family iron-siderophore receptor 1866422 2953720 YPTB1549 Yersinia pseudotuberculosis IP 32953 OMR family iron-siderophore receptor YP_070077.1 1864161 R 273123 CDS YP_070078.1 51595887 2953721 complement(1866652..1868466) 1 NC_006155.1 similar to Yersinia pestis YPO1538 siderophore biosynthetic enzyme (99.6% evalue=0); siderophore biosynthetic enzyme 1868466 2953721 YPTB1550 Yersinia pseudotuberculosis IP 32953 siderophore biosynthetic enzyme YP_070078.1 1866652 R 273123 CDS YP_070079.1 51595888 2955675 1869413..1870303 1 NC_006155.1 similar to Yersinia pestis YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase (100% evalue=1.E-168); Escherichia coli Z2012 galU; UTP--glucose-1-phosphate uridylyltransferase (73.4% evalue=1.E-122); UTP-glucose-1-phosphate uridylyltransferase 1870303 galU 2955675 galU Yersinia pseudotuberculosis IP 32953 UTP-glucose-1-phosphate uridylyltransferase YP_070079.1 1869413 D 273123 CDS YP_070080.1 51595889 2955670 1870387..1871280 1 NC_006155.1 similar to Yersinia pestis YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase (100% evalue=1.E-167); Escherichia coli ECs2846 Galf transferase (65.3% evalue=1.E-107); UTP-glucose-1-phosphate uridylyltransferase 1871280 galF 2955670 galF Yersinia pseudotuberculosis IP 32953 UTP-glucose-1-phosphate uridylyltransferase YP_070080.1 1870387 D 273123 CDS YP_070081.1 51595890 2955732 1871666..1873075 1 NC_006155.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1873075 gnd 2955732 gnd Yersinia pseudotuberculosis IP 32953 6-phosphogluconate dehydrogenase YP_070081.1 1871666 D 273123 CDS YP_070082.1 51595891 2956711 1873396..1873854 1 NC_006155.1 similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 1873854 tnp 2956711 tnp Yersinia pseudotuberculosis IP 32953 transposase for the IS1541 insertion element YP_070082.1 1873396 D 273123 CDS YP_070083.1 51595892 2955796 complement(1873985..1874599) 1 NC_006155.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 1874599 hisI 2955796 hisI Yersinia pseudotuberculosis IP 32953 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_070083.1 1873985 R 273123 CDS YP_070084.1 51595893 2955793 complement(1874593..1875369) 1 NC_006155.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1875369 hisF 2955793 hisF Yersinia pseudotuberculosis IP 32953 imidazole glycerol phosphate synthase subunit HisF YP_070084.1 1874593 R 273123 CDS YP_070085.1 51595894 2955789 complement(1875351..1876088) 1 NC_006155.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1876088 hisA 2955789 hisA Yersinia pseudotuberculosis IP 32953 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_070085.1 1875351 R 273123 CDS YP_070086.1 51595895 2955795 complement(1876094..1876684) 1 NC_006155.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1876684 hisH 2955795 hisH Yersinia pseudotuberculosis IP 32953 imidazole glycerol phosphate synthase subunit HisH YP_070086.1 1876094 R 273123 CDS YP_070087.1 51595896 2955790 complement(1876684..1877751) 1 NC_006155.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1877751 hisB 2955790 hisB Yersinia pseudotuberculosis IP 32953 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_070087.1 1876684 R 273123 CDS YP_070088.1 51595897 2955791 complement(1877748..1878896) 1 NC_006155.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1878896 hisC 2955791 hisC Yersinia pseudotuberculosis IP 32953 histidinol-phosphate aminotransferase YP_070088.1 1877748 R 273123 CDS YP_070089.1 51595898 2955792 complement(1878899..1880230) 1 NC_006155.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1880230 hisD 2955792 hisD Yersinia pseudotuberculosis IP 32953 histidinol dehydrogenase YP_070089.1 1878899 R 273123 CDS YP_070090.1 51595899 2955794 complement(1880234..1881133) 1 NC_006155.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1881133 hisG 2955794 hisG Yersinia pseudotuberculosis IP 32953 ATP phosphoribosyltransferase YP_070090.1 1880234 R 273123 CDS YP_070091.1 51595900 2953722 1881839..1882666 1 NC_006155.1 similar to Yersinia pestis YPO1551 exported protein (100% evalue=1.E-157); Salmonella typhi STY2279 conserved hypothetical protein (65.3% evalue=6.E-99); hypothetical protein 1882666 2953722 YPTB1563 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070091.1 1881839 D 273123 CDS YP_070092.1 51595901 2953723 complement(1882973..1883629) 1 NC_006155.1 hypothetical protein 1883629 2953723 YPTB1564 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070092.1 1882973 R 273123 CDS YP_070093.1 51595902 2953724 complement(1884738..1885733) 1 NC_006155.1 similar to Yersinia pestis YPO1553 ribose transport system, permease (99.3% evalue=1.E-178); Mesorhizobium loti mlr7287 ABC transporter, permease (40.4% evalue=2.E-69); sugar ABC transporter permease 1885733 2953724 YPTB1565 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_070093.1 1884738 R 273123 CDS YP_070094.1 51595903 2953725 complement(1885730..1887286) 1 NC_006155.1 similar to Agrobacterium tumefaciens Atu2819 rbsA; ABC transporter, nucleotide binding/ATPase [ribose] (39.2% evalue=2.E-97); Agrobacterium tumefaciens AGR_C_5112 ABC transporter protein, ATP binding component (39.2% evalue=2.E-97); sugar ABC transporter ATPase 1887286 2953725 YPTB1566 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_070094.1 1885730 R 273123 CDS YP_070095.1 51595904 2953726 1887572..1888663 1 NC_006155.1 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 1888663 2953726 YPTB1567 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070095.1 1887572 D 273123 CDS YP_070096.1 51595905 2957005 1889123..1890514 1 NC_006155.1 similar to Yersinia pestis YPO1557 yeeF; Amino acid permease (99.7% evalue=0); Escherichia coli ECs2816 amino acid/amine transport protein (73.6% evalue=0); APC family amino acid permease 1890514 yeeF 2957005 yeeF Yersinia pseudotuberculosis IP 32953 APC family amino acid permease YP_070096.1 1889123 D 273123 CDS YP_070097.1 51595906 2956571 complement(1891312..1892742) 1 NC_006155.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 1892742 sbcB 2956571 sbcB Yersinia pseudotuberculosis IP 32953 exonuclease I YP_070097.1 1891312 R 273123 CDS YP_070098.1 51595907 2953727 1893005..1894144 1 NC_006155.1 similar to Yersinia pestis YPO1559 hypothetical protein (99.4% evalue=0); Ralstonia solanacearum RS03845 signal peptide protein (37.5% evalue=1.E-58); hypothetical protein 1894144 2953727 YPTB1570 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070098.1 1893005 D 273123 CDS YP_070099.1 51595908 2953728 1894578..1894895 1 NC_006155.1 similar to Yersinia pestis YPO1560 conserved hypothetical protein (100% evalue=1.E-53); Escherichia coli Z3168 yeeX; alpha helix protein (84.1% evalue=3.E-44); hypothetical protein 1894895 2953728 YPTB1571 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070099.1 1894578 D 273123 CDS YP_070100.1 51595909 2953729 complement(1895039..1898266) 1 NC_006155.1 similar to Yersinia pestis YPO3944 invasin (35.3% evalue=1.E-145); invasin 1898266 2953729 YPTB1572 Yersinia pseudotuberculosis IP 32953 invasin YP_070100.1 1895039 R 273123 CDS YP_070101.1 51595910 2953730 1899210..1900610 1 NC_006155.1 similar to Yersinia pestis YPO1563 transmembrane transporter (99.7% evalue=0); Salmonella typhi STY2520 transport protein (54.9% evalue=1.E-131); major facilitator superfamily anion:cation symporter family transporter 1900610 2953730 YPTB1573 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily anion:cation symporter family transporter YP_070101.1 1899210 D 273123 CDS YP_070102.1 51595911 2953731 complement(1900619..1901044) 1 NC_006155.1 similar to Yersinia pestis YPO1564 membrane protein (97.8% evalue=2.E-77); Bacillus subtilis BG10978 yuxK, yugD; unknown (39% evalue=2.E-22); hypothetical protein 1901044 2953731 YPTB1574 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070102.1 1900619 R 273123 CDS YP_070103.1 51595912 2953732 1901469..1902209 1 NC_006155.1 similar to Yersinia pestis YPO1565 oxidoreductase (100% evalue=1.E-135); Agrobacterium tumefaciens Atu4466 oxidoreductase (57.7% evalue=3.E-73); oxidoreductase 1902209 2953732 YPTB1575 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_070103.1 1901469 D 273123 CDS YP_070104.1 51595913 2953733 1902257..1903099 1 NC_006155.1 similar to Yersinia pestis YPO1566 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase (99.6% evalue=1.E-164); Mesorhizobium loti mll4780 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (64.3% evalue=1.E-104); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1903099 2953733 YPTB1576 Yersinia pseudotuberculosis IP 32953 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_070104.1 1902257 D 273123 CDS YP_070105.2 284987826 2953734 1903131..1904408 1 NC_006155.1 similar to Yersinia pestis YPO1567 racemase (100% evalue=0); Sinorhizobium meliloti SMb21113 enzyme similar to human rTSbeta protein (72.3% evalue=1.E-180); racemase 1904408 2953734 YPTB1577 Yersinia pseudotuberculosis IP 32953 racemase YP_070105.2 1903131 D 273123 CDS YP_070106.1 51595915 2955956 1904686..1905831 1 NC_006155.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 1905831 lldD 2955956 lldD Yersinia pseudotuberculosis IP 32953 L-lactate dehydrogenase YP_070106.1 1904686 D 273123 CDS YP_070107.1 51595916 2955216 complement(1906036..1907403) 1 NC_006155.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 1907403 argG 2955216 argG Yersinia pseudotuberculosis IP 32953 argininosuccinate synthase YP_070107.1 1906036 R 273123 CDS YP_070108.1 51595917 2957006 1907697..1909127 1 NC_006155.1 similar to Yersinia pestis YPO1571 yeeO; sugar transporter (100% evalue=0); Salmonella typhi STY2216 inner membrane protein (63.1% evalue=1.E-175); hypothetical protein 1909127 yeeO 2957006 yeeO Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070108.1 1907697 D 273123 CDS YP_070109.1 51595918 2953735 complement(1909155..1910495) 1 NC_006155.1 similar to Yersinia pestis YPO1572 sugar transporter (100% evalue=0); Escherichia coli ECs3031 transport protein (24% evalue=1.E-21); MFS aromatic acid:H+ symporter 1910495 2953735 YPTB1581 Yersinia pseudotuberculosis IP 32953 MFS aromatic acid:H+ symporter YP_070109.1 1909155 R 273123 CDS YP_070110.1 51595919 2953736 complement(1910531..1911439) 1 NC_006155.1 similar to Yersinia pestis YPO1573 polysaccharide deacetylase (99.6% evalue=0); Helicobacter pylori_J99jhp0295 (75.3% evalue=1.E-133); polysaccharide deacetylase 1911439 2953736 YPTB1582 Yersinia pseudotuberculosis IP 32953 polysaccharide deacetylase YP_070110.1 1910531 R 273123 CDS YP_070111.1 51595920 2953737 1911989..1912684 1 NC_006155.1 similar to Yersinia pestis YPO1574 exported protein (100% evalue=1.E-132); hypothetical protein 1912684 2953737 YPTB1583 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070111.1 1911989 D 273123 CDS YP_070112.1 51595921 2953738 1912774..1913313 1 NC_006155.1 similar to Yersinia pestis YPO1575 conserved hypothetical protein (100% evalue=3.E-88); Salmonella typhimurium STM4192 cytoplasmic protein (87.1% evalue=1.E-82); hypothetical protein 1913313 2953738 YPTB1584 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070112.1 1912774 D 273123 CDS YP_070113.1 51595922 2953739 1914026..1915048 1 NC_006155.1 similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 1915048 2953739 YPTB1585 Yersinia pseudotuberculosis IP 32953 transposase YP_070113.1 1914026 D 273123 CDS YP_070114.1 51595923 2953740 1915048..1915827 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 1915827 2953740 YPTB1586 Yersinia pseudotuberculosis IP 32953 transposase/IS protein YP_070114.1 1915048 D 273123 CDS YP_070115.1 51595924 2953741 complement(1916227..1916436) 1 NC_006155.1 hypothetical protein 1916436 2953741 YPTB1587 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070115.1 1916227 R 273123 CDS YP_070116.1 51595925 2953742 complement(1916426..1916926) 1 NC_006155.1 similar to Yersinia pestis YPO1902 hypothetical protein (100% evalue=5.E-93); Salmonella typhi STY4526 hypothetical protein (34.6% evalue=9.E-24); hypothetical protein 1916926 2953742 YPTB1588 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070116.1 1916426 R 273123 CDS YP_070117.1 51595926 2953743 complement(1916992..1917177) 1 NC_006155.1 similar to Yersinia pestis YPO1903 hypothetical protein (100% evalue=5.E-25); hypothetical protein 1917177 2953743 YPTB1589 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070117.1 1916992 R 273123 CDS YP_070118.1 51595927 2953744 complement(1917521..1918447) 1 NC_006155.1 similar to Yersinia pestis YPO1905a hypothetical protein (100% evalue=1.E-62); hypothetical protein 1918447 2953744 YPTB1590 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070118.1 1917521 R 273123 CDS YP_070119.1 51595928 2955668 complement(1919320..1921341) 1 NC_006155.1 similar to Yersinia pestis YPO1906 fyuA, psn; pesticin/yersiniabactin receptor protein (99.8% evalue=0); Ralstonia solanacearum RS04230 siderophore receptor protein (32.2% evalue=7.E-83); OMR family pesticin/yersiniabactin receptor protein 1921341 fyuA 2955668 fyuA Yersinia pseudotuberculosis IP 32953 OMR family pesticin/yersiniabactin receptor protein YP_070119.1 1919320 R 273123 CDS YP_070120.1 51595929 2956970 complement(1921472..1923049) 1 NC_006155.1 similar to Yersinia pestis YPO1907 ybtE, irp5; yersiniabactin siderophore biosynthetic protein (100% evalue=0); Bacillus subtilis BG11020 dhbE, entE; 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E) (50.5% evalue=1.E-135); yersiniabactin siderophore biosynthetic protein 1923049 ybtE 2956970 ybtE Yersinia pseudotuberculosis IP 32953 yersiniabactin siderophore biosynthetic protein YP_070120.1 1921472 R 273123 CDS YP_070121.1 51595930 2956974 complement(1923053..1923841) 1 NC_006155.1 similar to Yersinia pestis YPO1908 ybtT, irp4; yersiniabactin biosynthetic protein YbtT (100% evalue=1.E-155); Bacillus subtilis BG10171 srfAD, comL, srfA4; surfactin synthetase subunit 4 (31.7% evalue=6.E-26); yersiniabactin biosynthetic protein YbtT 1923841 ybtT 2956974 ybtT Yersinia pseudotuberculosis IP 32953 yersiniabactin biosynthetic protein YbtT YP_070121.1 1923053 R 273123 CDS YP_070122.1 51595931 2956975 complement(1923853..1924953) 1 NC_006155.1 similar to Yersinia pestis YPO1909 ybtU, irp3; yersiniabactin biosynthetic protein YbtU (100% evalue=0); Ralstonia solanacearum RS04226 siderophore-like synthase (38.2% evalue=4.E-54); yersiniabactin biosynthetic protein YbtU 1924953 ybtU 2956975 ybtU Yersinia pseudotuberculosis IP 32953 yersiniabactin biosynthetic protein YbtU YP_070122.1 1923853 R 273123 CDS YP_070123.1 51595932 2955895 complement(1924950..1934441) 1 NC_006155.1 similar to Yersinia pestis YPO1910 irp1; yersiniabactin biosynthetic protein (99.9% evalue=0); Mesorhizobium loti mlr9053 polyketide synthase (38.7% evalue=1.E-167); yersiniabactin biosynthetic protein 1934441 irp1 2955895 irp1 Yersinia pseudotuberculosis IP 32953 yersiniabactin biosynthetic protein YP_070123.1 1924950 R 273123 CDS YP_070124.1 51595933 2955896 complement(1934529..1940636) 1 NC_006155.1 similar to Yersinia pestis YPO1911 irp2; yersiniabactin biosynthetic protein (100% evalue=0); yersiniabactin biosynthetic protein 1940636 irp2 2955896 irp2 Yersinia pseudotuberculosis IP 32953 yersiniabactin biosynthetic protein YP_070124.1 1934529 R 273123 CDS YP_070125.1 51595934 2956969 complement(1940827..1941786) 1 NC_006155.1 similar to Yersinia pestis YPO1912 ybtA; transcriptional regulator YbtA (100% evalue=0); Anabaena all2621 transcriptional regulator (34.3% evalue=2.E-18); transcriptional regulator YbtA 1941786 ybtA 2956969 ybtA Yersinia pseudotuberculosis IP 32953 transcriptional regulator YbtA YP_070125.1 1940827 R 273123 CDS YP_070126.1 51595935 2956971 1941953..1943755 1 NC_006155.1 similar to Yersinia pestis YPO1913 ybtP, irp6; lipoprotein inner membrane ABC-transporter (99.6% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (39% evalue=1.E-102); lipoprotein inner membrane ABC-transporter 1943755 ybtP 2956971 ybtP Yersinia pseudotuberculosis IP 32953 lipoprotein inner membrane ABC-transporter YP_070126.1 1941953 D 273123 CDS YP_070127.1 51595936 2956972 1943742..1945544 1 NC_006155.1 similar to Yersinia pestis YPO1914 ybtQ, irp7; inner membrane ABC-transporter YbtQ (100% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (34.3% evalue=2.E-81); ABC transporter permease 1945544 ybtQ 2956972 ybtQ Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_070127.1 1943742 D 273123 CDS YP_070128.1 51595937 2956976 1945537..1946817 1 NC_006155.1 MFS superfamily transporter signal transducer 1946817 ybtX 2956976 ybtX Yersinia pseudotuberculosis IP 32953 MFS superfamily transporter signal transducer YP_070128.1 1945537 D 273123 CDS YP_070129.1 51595938 2956973 1946845..1948149 1 NC_006155.1 catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin; salicylate synthase Irp9 1948149 ybtS 2956973 ybtS Yersinia pseudotuberculosis IP 32953 salicylate synthase Irp9 YP_070129.1 1946845 D 273123 CDS YP_070130.1 51595939 2953746 complement(1950283..1950912) 1 NC_006155.1 similar to Yersinia pestis YPO1576 GerR-family transcriptional regulatory protein (100% evalue=1.E-114); Escherichia coli ECs0418 transcription regulator (70.8% evalue=7.E-79); GerR family transcriptional regulator 1950912 2953746 YPTB1603 Yersinia pseudotuberculosis IP 32953 GerR family transcriptional regulator YP_070130.1 1950283 R 273123 CDS YP_070131.1 51595940 2953747 complement(1951170..1952462) 1 NC_006155.1 similar to Yersinia pestis YPO1577 C4-dicarboxylate transporter, large subunit (100% evalue=0); Agrobacterium tumefaciens AGR_L_3348 hypothetical 46.1 KD protein in PlsC 3'region (48.2% evalue=1.E-115); TRAP dicarboxylate transporter subunit DctM 1952462 2953747 YPTB1604 Yersinia pseudotuberculosis IP 32953 TRAP dicarboxylate transporter subunit DctM YP_070131.1 1951170 R 273123 CDS YP_070132.1 51595941 2953748 complement(1952482..1952988) 1 NC_006155.1 similar to Yersinia pestis YPO1578 C4-dicarboxylate transporter, small subunit (100% evalue=7.E-91); Sinorhizobium meliloti SMb21352 dctQ; C4-dicarboxylate small membrane transport protein (26.8% evalue=1.E-13); TRAP dicarboxylate family transporter subunit DctQ 1952988 2953748 YPTB1605 Yersinia pseudotuberculosis IP 32953 TRAP dicarboxylate family transporter subunit DctQ YP_070132.1 1952482 R 273123 CDS YP_070133.1 51595942 2953749 complement(1953112..1954104) 1 NC_006155.1 similar to Yersinia pestis YPO1579 C4-dicarboxylate transporter, periplasmic protein (99% evalue=0); Agrobacterium tumefaciens Atu3137 C4-dicarboxylate-binding protein (39% evalue=1.E-57); TRAP dicarboxylate family transporter subunit DctP 1954104 2953749 YPTB1606 Yersinia pseudotuberculosis IP 32953 TRAP dicarboxylate family transporter subunit DctP YP_070133.1 1953112 R 273123 CDS YP_070134.1 51595943 2953750 1954627..1955367 1 NC_006155.1 similar to Yersinia pestis YPO1580 phosphopantetheinyl transferase (99.1% evalue=1.E-139); Pseudomonas aeruginosa PA1165 hypothetical protein (36.9% evalue=4.E-23); phosphopantetheinyl transferase 1955367 2953750 YPTB1607 Yersinia pseudotuberculosis IP 32953 phosphopantetheinyl transferase YP_070134.1 1954627 D 273123 CDS YP_070135.1 51595944 2956399 complement(1955793..1957919) 1 NC_006155.1 similar to Yersinia pestis YPO1581 rafA; alpha-galactosidase (99.8% evalue=0); C. perfringens CPE0512 agaN; alpha-galactosidase (33.9% evalue=2.E-86); alpha-galactosidase 1957919 rafA 2956399 rafA Yersinia pseudotuberculosis IP 32953 alpha-galactosidase YP_070135.1 1955793 R 273123 CDS YP_070136.1 51595945 2955930 complement(1957997..1959304) 1 NC_006155.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 1959304 lacY 2955930 lacY Yersinia pseudotuberculosis IP 32953 galactoside permease YP_070136.1 1957997 R 273123 CDS YP_070137.1 51595946 2956704 1959659..1960675 1 NC_006155.1 similar to Sinorhizobium meliloti SMb20324 thuR; ThuR, regulatory protein for trehalosemaltose transport system (34.2% evalue=3.E-41); Brucella melitensis BMEII0946 laci-family transcription regulator (35.1% evalue=5.E-45); regulatory protein ThuR 1960675 thuR 2956704 thuR Yersinia pseudotuberculosis IP 32953 regulatory protein ThuR YP_070137.1 1959659 D 273123 CDS YP_070138.1 51595947 2953751 complement(1961081..1961893) 1 NC_006155.1 similar to Yersinia pestis YPO1732 conserved hypothetical protein (100% evalue=1.E-160); Escherichia coli Z3132 hypothetical protein (66% evalue=3.E-97); hypothetical protein 1961893 2953751 YPTB1611 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070138.1 1961081 R 273123 CDS YP_070139.1 51595948 2953752 complement(1962283..1962567) 1 NC_006155.1 similar to Yersinia pestis YPO1733 conserved hypothetical protein (100% evalue=3.E-47); Mesorhizobium loti mlr3009 hypothetical protein (48.9% evalue=1.E-17); hypothetical protein 1962567 2953752 YPTB1612 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070139.1 1962283 R 273123 CDS YP_070140.1 51595949 2953753 complement(1962804..1963655) 1 NC_006155.1 similar to Yersinia pestis YPO1734 conserved hypothetical protein (100% evalue=1.E-160); Pseudomonas aeruginosa PA4780 conserved hypothetical protein (67.7% evalue=1.E-105); hypothetical protein 1963655 2953753 YPTB1613 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070140.1 1962804 R 273123 CDS YP_070141.1 51595950 2953754 complement(1963758..1965476) 1 NC_006155.1 similar to Yersinia pestis YPO1735 ABC transporter (ATP-binding protein) (100% evalue=0); Agrobacterium tumefaciens Atu1738 ABC transporter, nucleotide binding/ATPase (68% evalue=0); ABC transporter ATP-binding protein 1965476 2953754 YPTB1614 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_070141.1 1963758 R 273123 CDS YP_070142.1 51595951 2953755 complement(1966378..1966764) 1 NC_006155.1 similar to Yersinia pestis YPO1737 AraC-family transcriptional regulatory protein (99.2% evalue=4.E-70); AraC family transcriptional regulator 1966764 2953755 YPTB1615 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_070142.1 1966378 R 273123 CDS YP_070143.1 51595952 2953756 1967319..1967558 1 NC_006155.1 similar to Yersinia pestis YPO1738 conserved hypothetical protein (98.7% evalue=3.E-37); Escherichia coli JW1891 yecJ; Hypothetical protein (77.9% evalue=1.E-27); hypothetical protein 1967558 2953756 YPTB1616 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070143.1 1967319 D 273123 CDS YP_070144.1 51595953 2953757 complement(1967649..1967882) 1 NC_006155.1 similar to Yersinia pestis YPO1739 membrane protein (98.6% evalue=9.E-35); Salmonella typhi STY1971 exported protein (54.7% evalue=3.E-18); hypothetical protein 1967882 2953757 YPTB1617 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070144.1 1967649 R 273123 CDS YP_070145.1 51595954 2953758 1968465..1968749 1 NC_006155.1 similar to Yersinia pestis YPO1740 exported protein (95.7% evalue=9.E-43); Escherichia coli JW1814 hypothetical protein (50% evalue=1.E-09); hypothetical protein 1968749 2953758 YPTB1618 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070145.1 1968465 D 273123 CDS YP_070146.1 51595955 2953759 1969012..1969311 1 NC_006155.1 similar to Yersinia pestis YPO1741 hypothetical protein (100% evalue=5.E-57); hypothetical protein 1969311 2953759 YPTB1619 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070146.1 1969012 D 273123 CDS YP_070147.1 51595956 2953760 1969354..1969665 1 NC_006155.1 similar to Yersinia pestis YPO1742 hypothetical protein (99% evalue=3.E-52); hypothetical protein 1969665 2953760 YPTB1620 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070147.1 1969354 D 273123 CDS YP_070148.1 51595957 2955231 1969902..1971275 1 NC_006155.1 similar to Yersinia pestis YPO3421 aroP; aromatic amino acid transport protein (77.7% evalue=0); amino acid APC transporter 1971275 aroP 2955231 aroP Yersinia pseudotuberculosis IP 32953 amino acid APC transporter YP_070148.1 1969902 D 273123 CDS YP_070149.1 51595958 2953761 complement(1971571..1972179) 1 NC_006155.1 catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 1972179 pagP 2953761 pagP Yersinia pseudotuberculosis IP 32953 palmitoyl transferase YP_070149.1 1971571 R 273123 CDS YP_070150.1 51595959 2953762 1973181..1973297 1 NC_006155.1 similar to Yersinia pestis YPO1745 conserved hypothetical protein (100% evalue=2.E-14); Salmonella typhi STY1968 conserved hypothetical protein (84.2% evalue=1.E-10); hypothetical protein 1973297 2953762 YPTB1623 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070150.1 1973181 D 273123 CDS YP_070151.1 51595960 2955370 1973340..1973549 1 NC_006155.1 similar to Yersinia pestis YPO1746 cspC, msmB; cold shock protein (100% evalue=2.E-34); Escherichia coli b1823 cspC, msmB; cold shock-like protein cspC (98.5% evalue=5.E-34); cold shock-like protein CspC 1973549 cspC 2955370 cspC Yersinia pseudotuberculosis IP 32953 cold shock-like protein CspC YP_070151.1 1973340 D 273123 CDS YP_070152.1 51595961 2953763 complement(1973640..1974395) 1 NC_006155.1 similar to Yersinia pestis YPO1747 conserved hypothetical protein (100% evalue=1.E-145); Vibrio cholerae VC0710 conserved hypothetical protein (32.1% evalue=3.E-19); hypothetical protein 1974395 2953763 YPTB1625 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070152.1 1973640 R 273123 CDS YP_070153.1 51595962 2956549 1974795..1975634 1 NC_006155.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase 1975634 rrmA 2956549 rrmA Yersinia pseudotuberculosis IP 32953 23S rRNA methyltransferase YP_070153.1 1974795 D 273123 CDS YP_070154.1 51595963 2953764 complement(1975856..1976134) 1 NC_006155.1 similar to Yersinia pestis YPO2096 hypothetical phage protein (42.5% evalue=3.E-09); hypothetical protein 1976134 2953764 YPTB1627 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070154.1 1975856 R 273123 CDS YP_070155.1 51595964 2953765 complement(1976356..1978437) 1 NC_006155.1 similar to Pseudomonas aeruginosa PA2177 probable sensor/response regulator hybrid (48.8% evalue=2.E-30); hypothetical protein 1978437 2953765 YPTB1628 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070155.1 1976356 R 273123 CDS YP_070156.1 51595965 2955533 1978796..1981087 1 NC_006155.1 similar to Yersinia pestis YPO1753 fcuA; ferrichrome receptor protein (98.2% evalue=0); Caulobacter crescentus CC2928 TonB-dependent receptor (38.3% evalue=1.E-142); ferrichrome receptor protein 1981087 fcuA 2955533 fcuA Yersinia pseudotuberculosis IP 32953 ferrichrome receptor protein YP_070156.1 1978796 D 273123 CDS YP_070157.1 51595966 2956999 complement(1981264..1981833) 1 NC_006155.1 similar to Yersinia pestis YPO1754 yebN; membrane protein (100% evalue=1.E-103); Salmonella typhimurium STM1834 yebN; YebN family transport protein (69.5% evalue=5.E-72); hypothetical protein 1981833 yebN 2956999 yebN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070157.1 1981264 R 273123 CDS YP_070158.1 51595967 2957101 complement(1982262..1982723) 1 NC_006155.1 similar to Yersinia pestis YPO1755 yobD; membrane protein (100% evalue=1.E-81); Salmonella typhi STY1962 membrane protein (61.1% evalue=1.E-49); hypothetical protein 1982723 yobD 2957101 yobD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070158.1 1982262 R 273123 CDS YP_070159.1 51595968 2956000 complement(1982923..1983810) 1 NC_006155.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 1983810 manZ 2956000 manZ Yersinia pseudotuberculosis IP 32953 PTS system mannose-specific transporter subunit IID YP_070159.1 1982923 R 273123 CDS YP_070160.1 51595969 2955999 complement(1983817..1984614) 1 NC_006155.1 similar to Yersinia pestis YPO1757 manY, ptsP, pel; PTS system, mannose-specific IIC component (100% evalue=1.E-142); Escherichia coli JW1807 manY; Phosphotransferase system enzyme II, mannose-specific, factor II-P (87.7% evalue=1.E-126); PTS system mannose-specific transporter subunit IIC 1984614 manY 2955999 manY Yersinia pseudotuberculosis IP 32953 PTS system mannose-specific transporter subunit IIC YP_070160.1 1983817 R 273123 CDS YP_070161.1 51595970 2955998 complement(1984706..1985680) 1 NC_006155.1 similar to Yersinia pestis YPO1758 manX, ptsL, gptB; PTS system, mannose-specific IIAB component (99.6% evalue=1.E-180); Escherichia coli JW1806 manX; PTS system, mannose-specific II component (81.4% evalue=1.E-145); PTS system mannose-specific transporter subunit IIAB 1985680 manX 2955998 manX Yersinia pseudotuberculosis IP 32953 PTS system mannose-specific transporter subunit IIAB YP_070161.1 1984706 R 273123 CDS YP_070162.1 51595971 2957100 1986391..1987935 1 NC_006155.1 similar to Yersinia pestis YPO1759 yoaE; membrane protein (100% evalue=0); Salmonella typhi STY1958 membrane protein (73.5% evalue=0); CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps 1987935 yoaE 2957100 yoaE Yersinia pseudotuberculosis IP 32953 CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps YP_070162.1 1986391 D 273123 CDS YP_070163.1 51595972 2955832 complement(1988037..1988504) 1 NC_006155.1 similar to Yersinia pestis YPO1760 hpcR, hpaR; homoprotocatechuate degradative operon repressor (100% evalue=1.E-83); Salmonella typhimurium STM1100 hpaR; 4-hydroxyphenylacetate catabolism (70.5% evalue=7.E-52); homoprotocatechuate degradative operon repressor 1988504 hpcR 2955832 hpcR Yersinia pseudotuberculosis IP 32953 homoprotocatechuate degradative operon repressor YP_070163.1 1988037 R 273123 CDS YP_070164.1 51595973 2955828 1988892..1989524 1 NC_006155.1 similar to Salmonella typhi STY1134 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (65.5% evalue=1.E-74); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1989524 hpaG 2955828 hpaG Yersinia pseudotuberculosis IP 32953 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_070164.1 1988892 D 273123 CDS YP_070165.1 51595974 2953766 1989521..1990285 1 NC_006155.1 similar to Salmonella typhimurium STM1101 hpaG; bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase (76.5% evalue=1.E-93); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1990285 2953766 YPTB1638 Yersinia pseudotuberculosis IP 32953 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_070165.1 1989521 D 273123 CDS YP_070166.1 51595975 2955826 1990282..1991748 1 NC_006155.1 similar to Yersinia pestis YPO1763 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (95% evalue=0); Salmonella typhimurium STM1102 hpaE; 4-hydroxyphenylacetate catabolism (84% evalue=0); 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 1991748 hpaE 2955826 hpaE Yersinia pseudotuberculosis IP 32953 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_070166.1 1990282 D 273123 CDS YP_070167.1 51595976 2955825 1991867..1992724 1 NC_006155.1 similar to Yersinia pestis YPO1764 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase (99.6% evalue=1.E-167); Salmonella typhi STY1137 hpcB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase (87.1% evalue=1.E-147); 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1992724 hpaD 2955825 hpaD Yersinia pseudotuberculosis IP 32953 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_070167.1 1991867 D 273123 CDS YP_070168.1 51595977 2955827 1992749..1993147 1 NC_006155.1 similar to Yersinia pestis YPO1765 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (100% evalue=2.E-72); Salmonella typhi STY1138 hpcD; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (72.2% evalue=1.E-48); 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1993147 hpaF 2955827 hpaF Yersinia pseudotuberculosis IP 32953 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_070168.1 1992749 D 273123 CDS YP_070169.1 51595978 2955829 1993141..1993944 1 NC_006155.1 similar to Yersinia pestis YPO1766 hpaH, hpcG; 2-oxo-hept-3-ene-1,7-dioate hydratase (99.6% evalue=1.E-152); Salmonella typhi STY1139 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (79.4% evalue=1.E-121); 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1993944 hpaH 2955829 hpaH Yersinia pseudotuberculosis IP 32953 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_070169.1 1993141 D 273123 CDS YP_070170.1 51595979 2955830 1993955..1994761 1 NC_006155.1 similar to Yersinia pestis YPO1767 hpaI, pcH; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (99.6% evalue=1.E-151); Salmonella typhi STY1140 hpcH, hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (73.7% evalue=1.E-105); 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1994761 hpaI 2955830 hpaI Yersinia pseudotuberculosis IP 32953 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_070170.1 1993955 D 273123 CDS YP_070171.1 51595980 2955831 1994787..1996154 1 NC_006155.1 similar to Yersinia pestis YPO1768 hpaX; 4-hydroxyphenylacetate permease (100% evalue=0); Salmonella typhi STY1141 hpaX; 4-hydroxyphenylacetate permease (76% evalue=0); major facilitator superfamily 4-hydroxyphenylacetate symporter 1996154 hpaX 2955831 hpaX Yersinia pseudotuberculosis IP 32953 major facilitator superfamily 4-hydroxyphenylacetate symporter YP_070171.1 1994787 D 273123 CDS YP_070172.1 51595981 2955823 1996222..1997784 1 NC_006155.1 similar to Yersinia pestis YPO1769 hpaB; 4-hydroxyphenylacetate 3-monooxygenase (100% evalue=0); Salmonella typhimurium STM1099 hpaB; 4-hydroxyphenylacetate catabolism (81.9% evalue=0); 4-hydroxyphenylacetate 3-monooxygenase 1997784 hpaB 2955823 hpaB Yersinia pseudotuberculosis IP 32953 4-hydroxyphenylacetate 3-monooxygenase YP_070172.1 1996222 D 273123 CDS YP_070173.1 51595982 2955824 1997805..1998302 1 NC_006155.1 similar to Yersinia pestis YPO1770 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein (100% evalue=1.E-94); Salmonella typhi STY1130 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein (72.9% evalue=4.E-62); 4-hydroxyphenylacetate 3-monooxygenase coupling protein 1998302 hpaC 2955824 hpaC Yersinia pseudotuberculosis IP 32953 4-hydroxyphenylacetate 3-monooxygenase coupling protein YP_070173.1 1997805 D 273123 CDS YP_070174.1 51595983 2956575 complement(1998582..1999946) 1 NC_006155.1 similar to Yersinia pestis YPO1771 sdaA; L-serine dehydratase (99.5% evalue=0); Escherichia coli JW1803 sdaA; L-serine dehydratase 1 (l-serine deaminase 1) (sdh 1) (l-sd1). (84.3% evalue=0); L-serine dehydratase 1999946 sdaA 2956575 sdaA Yersinia pseudotuberculosis IP 32953 L-serine dehydratase YP_070174.1 1998582 R 273123 CDS YP_070175.1 51595984 2953767 complement(2000654..2001253) 1 NC_006155.1 similar to Yersinia pestis YPO1772 MutT-family protein (99.4% evalue=1.E-111); Salmonella typhimurium STM1825 yeaB; NTP pyrophosphohydrolase (55.2% evalue=5.E-57); hypothetical protein 2001253 2953767 YPTB1648 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070175.1 2000654 R 273123 CDS YP_070176.1 51595985 2956204 complement(2001250..2002626) 1 NC_006155.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I 2002626 pabB 2956204 pabB Yersinia pseudotuberculosis IP 32953 para-aminobenzoate synthase component I YP_070176.1 2001250 R 273123 CDS YP_070177.1 51595986 2953768 2002791..2003048 1 NC_006155.1 similar to Yersinia pestis YPO1774 conserved hypothetical protein (98.8% evalue=2.E-43); Salmonella typhimurium STM1823 yoaH; cytoplasmic protein (62.7% evalue=3.E-13); hypothetical protein 2003048 2953768 YPTB1650 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070177.1 2002791 D 273123 CDS YP_070178.1 51595987 2956378 complement(2003174..2004355) 1 NC_006155.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 2004355 purT 2956378 purT Yersinia pseudotuberculosis IP 32953 phosphoribosylglycinamide formyltransferase 2 YP_070178.1 2003174 R 273123 CDS YP_070179.1 51595988 2955432 2004668..2006050 1 NC_006155.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 2006050 dbpA 2955432 dbpA Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase DbpA YP_070179.1 2004668 D 273123 CDS YP_070180.1 51595989 2953769 2006144..2006464 1 NC_006155.1 similar to Yersinia pestis YPO1777 conserved hypothetical protein (100% evalue=1.E-53); Escherichia coli JW1837 yebG; Hypothetical protein (ORF96) (55.7% evalue=2.E-23); hypothetical protein 2006464 2953769 YPTB1653 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070180.1 2006144 D 273123 CDS YP_070181.1 51595990 2953770 2006504..2006812 1 NC_006155.1 similar to Yersinia pestis YPO1778 conserved hypothetical protein (100% evalue=8.E-54); Escherichia coli ECs3772 hypothetical protein (66.6% evalue=3.E-29); hypothetical protein 2006812 2953770 YPTB1654 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070181.1 2006504 D 273123 CDS YP_070182.1 51595991 2953771 2006919..2007329 1 NC_006155.1 secreted protein; unknown function; hypothetical protein 2007329 2953771 YPTB1655 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070182.1 2006919 D 273123 CDS YP_070183.1 51595992 2956359 2007639..2009690 1 NC_006155.1 similar to Yersinia pestis YPO1780 ptrB, rlp; oligopeptidase B (100% evalue=0); Salmonella typhi STY2085 opdB; oligopeptidase (65% evalue=0); oligopeptidase B 2009690 ptrB 2956359 ptrB Yersinia pseudotuberculosis IP 32953 oligopeptidase B YP_070183.1 2007639 D 273123 CDS YP_070184.1 51595993 2956273 2010412..2011362 1 NC_006155.1 similar to Yersinia pestis YPO1781 pip; proline iminopeptidase (99.6% evalue=0); Mesorhizobium loti mlr7803 prolyl aminopeptidase (63.3% evalue=1.E-121); proline iminopeptidase 2011362 pip 2956273 pip Yersinia pseudotuberculosis IP 32953 proline iminopeptidase YP_070184.1 2010412 D 273123 CDS YP_070185.1 51595994 2955822 complement(2011422..2011652) 1 NC_006155.1 similar to Yersinia pestis YPO1782 holE; DNA polymerase III, theta subunit (100% evalue=2.E-37); Salmonella typhimurium STM1876 holE; DNA polymerase III, theta subunit (64.4% evalue=1.E-20); DNA polymerase III subunit theta 2011652 holE 2955822 holE Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit theta YP_070185.1 2011422 R 273123 CDS YP_070186.1 51595995 2955650 2012053..2012562 1 NC_006155.1 similar to Yersinia pestis YPO1783 ftnA, ftn, rsgA, gen-165; ferritin (99.4% evalue=4.E-93); Vibrio cholerae VC0078 ferritin (68.4% evalue=8.E-65); ferritin 2012562 ftnA 2955650 ftnA Yersinia pseudotuberculosis IP 32953 ferritin YP_070186.1 2012053 D 273123 CDS YP_070187.1 51595996 2953772 2012941..2013327 1 NC_006155.1 similar to Yersinia pestis YPO1784 copper resistance protein (100% evalue=2.E-68); Salmonella typhimurium STM1875 yobA; homolog of Cu resistance protein CopC (51.7% evalue=3.E-28); copper resistance protein 2013327 2953772 YPTB1660 Yersinia pseudotuberculosis IP 32953 copper resistance protein YP_070187.1 2012941 D 273123 CDS YP_070188.1 51595997 2953773 2013330..2014214 1 NC_006155.1 similar to Yersinia pestis YPO1785 copper resistance protein D (100% evalue=1.E-166); Escherichia coli ECs2550 resistance protein (40.5% evalue=9.E-53); copper resistance protein D 2014214 2953773 YPTB1661 Yersinia pseudotuberculosis IP 32953 copper resistance protein D YP_070188.1 2013330 D 273123 CDS YP_070189.1 51595998 2957001 2014296..2014652 1 NC_006155.1 similar to Yersinia pestis YPO1786 yebY; exported protein (99.1% evalue=2.E-61); Escherichia coli ECs2549 hypothetical protein (59.8% evalue=6.E-32); hypothetical protein 2014652 yebY 2957001 yebY Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070189.1 2014296 D 273123 CDS YP_070190.1 51595999 2953774 complement(2015175..2015501) 1 NC_006155.1 similar to Yersinia pestis YPO1788 acyl carrier protein (100% evalue=3.E-59); Salmonella typhimurium STM2011 cytoplasmic protein (73.1% evalue=2.E-43); acyl carrier protein 2015501 2953774 YPTB1663 Yersinia pseudotuberculosis IP 32953 acyl carrier protein YP_070190.1 2015175 R 273123 CDS YP_070191.1 51596000 2953775 complement(2015495..2015953) 1 NC_006155.1 similar to Yersinia pestis YPO1789 membrane protein (100% evalue=1.E-83); Salmonella typhi STY2214 hypothetical protein (81.1% evalue=1.E-54); hypothetical protein 2015953 2953775 YPTB1664 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070191.1 2015495 R 273123 CDS YP_070192.1 51596001 2955586 2016462..2017622 1 NC_006155.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Yersinia has 2 copies of flhB; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB 2017622 flhB 2955586 flhB Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FlhB YP_070192.1 2016462 D 273123 CDS YP_070193.1 51596002 2955584 2017622..2019700 1 NC_006155.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2019700 flhA 2955584 flhA Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FlhA YP_070193.1 2017622 D 273123 CDS YP_070194.1 51596003 2955590 2019700..2020122 1 NC_006155.1 similar to Yersinia pestis YPO1792 flhE; flagellar protein FlhE precursor (99.2% evalue=5.E-74); Escherichia coli JW1867 flhE; FlhE protein (45.1% evalue=3.E-23); flagellar protein FlhE 2020122 flhE 2955590 flhE Yersinia pseudotuberculosis IP 32953 flagellar protein FlhE YP_070194.1 2019700 D 273123 CDS YP_070195.1 51596004 2953776 2020732..2023689 1 NC_006155.1 similar to Yersinia pestis YPO3944 invasin (38.7% evalue=1.E-136); invasin 2023689 2953776 YPTB1668 Yersinia pseudotuberculosis IP 32953 invasin YP_070195.1 2020732 D 273123 CDS YP_070196.1 51596005 2955583 complement(2023869..2024309) 1 NC_006155.1 similar to Yersinia pestis YPO1796 flgN; flagella synthesis protein FlgN (99.3% evalue=1.E-77); Escherichia coli b1070 flgN; flagella synthesis protein flgN (44.2% evalue=5.E-22); flagellar synthesis protein FlgN 2024309 flgN 2955583 flgN Yersinia pseudotuberculosis IP 32953 flagellar synthesis protein FlgN YP_070196.1 2023869 R 273123 CDS YP_070197.1 51596006 2955582 complement(2024328..2024630) 1 NC_006155.1 regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 2024630 flgM 2955582 flgM Yersinia pseudotuberculosis IP 32953 anti-sigma-28 factor FlgM YP_070197.1 2024328 R 273123 CDS YP_070198.1 51596007 2955558 complement(2024781..2025479) 1 NC_006155.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 2025479 flgA 2955558 flgA Yersinia pseudotuberculosis IP 32953 flagellar basal body P-ring biosynthesis protein FlgA YP_070198.1 2024781 R 273123 CDS YP_070199.1 51596008 2955560 2025718..2026131 1 NC_006155.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 2026131 flgB 2955560 flgB Yersinia pseudotuberculosis IP 32953 flagellar basal-body rod protein FlgB YP_070199.1 2025718 D 273123 CDS YP_070200.1 51596009 2955562 2026137..2026541 1 NC_006155.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 2026541 flgC 2955562 flgC Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgC YP_070200.1 2026137 D 273123 CDS YP_070201.1 51596010 2955564 2026556..2027242 1 NC_006155.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 2027242 flgD 2955564 flgD Yersinia pseudotuberculosis IP 32953 flagellar basal body rod modification protein YP_070201.1 2026556 D 273123 CDS YP_070202.1 51596011 2955566 2027444..2028730 1 NC_006155.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 2028730 flgE 2955566 flgE Yersinia pseudotuberculosis IP 32953 flagellar hook protein FlgE YP_070202.1 2027444 D 273123 CDS YP_070203.1 51596012 2955569 2028752..2029507 1 NC_006155.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Yersinia contains two copies of this and other flagella genes; flagellar basal body rod protein FlgF 2029507 flgF 2955569 flgF Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgF YP_070203.1 2028752 D 273123 CDS YP_070204.1 51596013 2955570 2029533..2030315 1 NC_006155.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 2030315 flgG 2955570 flgG Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgG YP_070204.1 2029533 D 273123 CDS YP_070205.1 51596014 2955573 2030459..2031148 1 NC_006155.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 2031148 flgH 2955573 flgH Yersinia pseudotuberculosis IP 32953 flagellar basal body L-ring protein YP_070205.1 2030459 D 273123 CDS YP_070206.1 51596015 2955575 2031163..2032272 1 NC_006155.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 2032272 flgI 2955575 flgI Yersinia pseudotuberculosis IP 32953 flagellar basal body P-ring biosynthesis protein FlgA YP_070206.1 2031163 D 273123 CDS YP_070207.1 51596016 2955577 2032272..2033216 1 NC_006155.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 2033216 flgJ 2955577 flgJ Yersinia pseudotuberculosis IP 32953 flagellar rod assembly protein/muramidase FlgJ YP_070207.1 2032272 D 273123 CDS YP_070208.1 51596017 2955579 2033944..2035608 1 NC_006155.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 2035608 flgK 2955579 flgK Yersinia pseudotuberculosis IP 32953 flagellar hook-associated protein FlgK YP_070208.1 2033944 D 273123 CDS YP_070209.2 161760582 2955581 2035714..2036727 1 NC_006155.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; flagellar hook-associated protein FlgL 2036727 flgL 2955581 flgL Yersinia pseudotuberculosis IP 32953 flagellar hook-associated protein FlgL YP_070209.2 2035714 D 273123 CDS YP_070210.1 51596019 2953777 complement(2036756..2037733) 1 NC_006155.1 similar to Yersinia pestis YPO1810 transcriptional regulatory protein (99.6% evalue=0); Brucella melitensis BMEI0398 deoxyribonucleoside regulator / dihydroxyacetone kinase (41.5% evalue=6.E-67); transcriptional regulator 2037733 2953777 YPTB1683 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070210.1 2036756 R 273123 CDS YP_070211.1 51596020 2953778 2037975..2040041 1 NC_006155.1 similar to Yersinia pestis YPO1811 oxidoreductase (99.4% evalue=0); Mesorhizobium loti mll7289 probable oxidoreductase (48.6% evalue=0); short chain dehydrogenase 2040041 2953778 YPTB1684 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_070211.1 2037975 D 273123 CDS YP_070212.1 51596021 2953779 2040189..2041229 1 NC_006155.1 similar to Yersinia pestis YPO1812 sugar transport system permease (97.7% evalue=0); Sinorhizobium meliloti SMb20315 sugar ABC transporter permease (59.7% evalue=1.E-104); sugar ABC transporter permease 2041229 2953779 YPTB1685 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_070212.1 2040189 D 273123 CDS YP_070213.1 51596022 2953780 2041272..2042267 1 NC_006155.1 similar to Yersinia pestis YPO1813 sugar-binding periplasmic protein (100% evalue=0); Sinorhizobium meliloti SMb20316 ABC transporter periplasmic sugar-binding protein (61.1% evalue=1.E-116); sugar ABC transporter substrate-binding protein 2042267 2953780 YPTB1686 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_070213.1 2041272 D 273123 CDS YP_070214.1 51596023 2953781 2042333..2043910 1 NC_006155.1 similar to Yersinia pestis YPO1814 sugar ABC transporter, ATP-binding protein (98.8% evalue=0); Sinorhizobium meliloti SMb20317 sugar ABC transporter ATP-binding protein (56.2% evalue=1.E-155); sugar ABC transporter ATP-binding protein 2043910 2953781 YPTB1687 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_070214.1 2042333 D 273123 CDS YP_070215.1 51596024 2953782 2043913..2044935 1 NC_006155.1 similar to Yersinia pestis YPO1815 sugar ABC transporter, permease (99.6% evalue=1.E-170); Sinorhizobium meliloti SMb20318 sugar ABC transporter permease (64.9% evalue=1.E-113); sugar ABC transporter permease 2044935 2953782 YPTB1688 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_070215.1 2043913 D 273123 CDS YP_070216.1 51596025 2953783 2044984..2045943 1 NC_006155.1 similar to Yersinia pestis YPO1816 sugar kinase (98.7% evalue=1.E-180); Escherichia coli JW1761 hypothetical protein (24.7% evalue=1.E-23); sugar kinase 2045943 2953783 YPTB1689 Yersinia pseudotuberculosis IP 32953 sugar kinase YP_070216.1 2044984 D 273123 CDS YP_070217.1 51596026 2953784 complement(2046009..2046608) 1 NC_006155.1 hypothetical protein 2046608 2953784 YPTB1690 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070217.1 2046009 R 273123 CDS YP_070218.1 51596027 2955619 complement(2047081..2047863) 1 NC_006155.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 2047863 fliR 2955619 fliR Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FliR YP_070218.1 2047081 R 273123 CDS YP_070219.1 51596028 2955618 complement(2047866..2048135) 1 NC_006155.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 2048135 fliQ 2955618 fliQ Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FliQ YP_070219.1 2047866 R 273123 CDS YP_070220.2 161760581 2955616 complement(2048241..2048981) 1 NC_006155.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 2048981 fliP 2955616 fliP Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FliP YP_070220.2 2048241 R 273123 CDS YP_070221.1 51596030 2955614 complement(2049062..2049430) 1 NC_006155.1 similar to Yersinia pestis YPO1821 fliO, mopB; flagellar protein FliO (99.1% evalue=7.E-63); Salmonella typhimurium STM1978 fliO; flagellar biosynthesis (45.8% evalue=1.E-19); flagellar protein FliO 2049430 fliO 2955614 fliO Yersinia pseudotuberculosis IP 32953 flagellar protein FliO YP_070221.1 2049062 R 273123 CDS YP_070222.1 51596031 2955612 complement(2049658..2050074) 1 NC_006155.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN 2050074 fliN 2955612 fliN Yersinia pseudotuberculosis IP 32953 flagellar motor switch protein FliN YP_070222.1 2049658 R 273123 CDS YP_070223.1 51596032 2955611 complement(2050071..2051072) 1 NC_006155.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 2051072 fliM 2955611 fliM Yersinia pseudotuberculosis IP 32953 flagellar motor switch protein FliM YP_070223.1 2050071 R 273123 CDS YP_070224.1 51596033 2955609 complement(2051078..2051548) 1 NC_006155.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 2051548 fliL 2955609 fliL Yersinia pseudotuberculosis IP 32953 flagellar basal body protein FliL YP_070224.1 2051078 R 273123 CDS YP_070225.1 51596034 2955608 complement(2051834..2053186) 1 NC_006155.1 similar to Yersinia pestis YPO1825 fliK; flagellar hook-length control protein FliK (99.3% evalue=0); Salmonella typhimurium STM1974 fliK; flagellar hook-length control protein (34.6% evalue=4.E-46); flagellar hook-length control protein FliK 2053186 fliK 2955608 fliK Yersinia pseudotuberculosis IP 32953 flagellar hook-length control protein FliK YP_070225.1 2051834 R 273123 CDS YP_070226.1 51596035 2955607 complement(2053183..2053629) 1 NC_006155.1 rod/hook and filament chaperone; flagellar biosynthesis chaperone 2053629 fliJ 2955607 fliJ Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis chaperone YP_070226.1 2053183 R 273123 CDS YP_070227.1 51596036 2955606 complement(2053705..2055105) 1 NC_006155.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 2055105 fliI 2955606 fliI Yersinia pseudotuberculosis IP 32953 flagellum-specific ATP synthase YP_070227.1 2053705 R 273123 CDS YP_070228.1 51596037 2955604 complement(2055105..2055821) 1 NC_006155.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 2055821 fliH 2955604 fliH Yersinia pseudotuberculosis IP 32953 flagellar assembly protein H YP_070228.1 2055105 R 273123 CDS YP_070229.1 51596038 2955602 complement(2055814..2056806) 1 NC_006155.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 2056806 fliG 2955602 fliG Yersinia pseudotuberculosis IP 32953 flagellar motor switch protein G YP_070229.1 2055814 R 273123 CDS YP_070230.1 51596039 2955600 complement(2056803..2058515) 1 NC_006155.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 2058515 fliF 2955600 fliF Yersinia pseudotuberculosis IP 32953 flagellar MS-ring protein YP_070230.1 2056803 R 273123 CDS YP_070231.1 51596040 2955598 2058868..2059179 1 NC_006155.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 2059179 fliE 2955598 fliE Yersinia pseudotuberculosis IP 32953 flagellar hook-basal body protein FliE YP_070231.1 2058868 D 273123 CDS YP_070232.1 51596041 2953785 2059345..2059512 1 NC_006155.1 similar to Yersinia pestis YPO2123 phage minor tail protein (83.6% evalue=7.E-23); phage minor tail protein 2059512 2953785 YPTB1705 Yersinia pseudotuberculosis IP 32953 phage minor tail protein YP_070232.1 2059345 D 273123 CDS YP_070233.1 51596042 2953786 2059537..2059842 1 NC_006155.1 similar to Yersinia pestis YPO1832 hypothetical protein (99% evalue=2.E-53); Salmonella typhi STY1030 bacteriophage protein (70% evalue=3.E-18); hypothetical protein 2059842 2953786 YPTB1706 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070233.1 2059537 D 273123 CDS YP_070234.1 51596043 2953788 complement(2060514..2061125) 1 NC_006155.1 similar to Yersinia pestis YPO1834 DNA-3-methyladenine glycosidase (99.5% evalue=1.E-110); M. pulmonis MYPU_0950 ogt; methylated-DNA--protein-cysteine methyltransferase (39.5% evalue=3.E-38); DNA-3-methyladenine glycosidase 2061125 2953788 YPTB1708 Yersinia pseudotuberculosis IP 32953 DNA-3-methyladenine glycosidase YP_070234.1 2060514 R 273123 CDS YP_070235.1 51596044 2953789 complement(2061286..2064240) 1 NC_006155.1 similar to Vibrio cholerae VCA0895 chemotactic transducer-related protein (35.8% evalue=1.E-153); Sinorhizobium meliloti SMc00339 cyaA; adenylate cyclase 1 protein (22.3% evalue=4.E-12); chemotactic transducer-related protein 2064240 2953789 YPTB1709 Yersinia pseudotuberculosis IP 32953 chemotactic transducer-related protein YP_070235.1 2061286 R 273123 CDS YP_070236.1 51596045 2953790 complement(2064594..2065469) 1 NC_006155.1 similar to Yersinia pestis YPO1837 AraC-family transcriptional regulatory protein (100% evalue=1.E-166); Salmonella typhimurium STM1082 bacterial regulatory protein, AraC family (28% evalue=1.E-19); AraC family transcriptional regulator 2065469 2953790 YPTB1710 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_070236.1 2064594 R 273123 CDS YP_070237.1 51596046 2955623 complement(2065770..2066132) 1 NC_006155.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT 2066132 fliT 2955623 fliT Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FliT YP_070237.1 2065770 R 273123 CDS YP_070238.1 51596047 2955621 complement(2066143..2066541) 1 NC_006155.1 flagellin specific chaperone; flagellar protein FliS 2066541 fliS 2955621 fliS Yersinia pseudotuberculosis IP 32953 flagellar protein FliS YP_070238.1 2066143 R 273123 CDS YP_070239.1 51596048 2955596 complement(2066552..2067952) 1 NC_006155.1 involved in flagellin assembly; flagellar capping protein 2067952 fliD 2955596 fliD Yersinia pseudotuberculosis IP 32953 flagellar capping protein YP_070239.1 2066552 R 273123 CDS YP_070240.1 51596049 2955594 2068249..2069358 1 NC_006155.1 structural flagella protein; flagellin 2069358 fliC 2955594 fliC Yersinia pseudotuberculosis IP 32953 flagellin YP_070240.1 2068249 D 273123 CDS YP_070241.1 51596050 2955591 2069705..2070427 1 NC_006155.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 2070427 fliA 2955591 fliA Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis sigma factor YP_070241.1 2069705 D 273123 CDS YP_070242.1 51596051 2955625 2070662..2071171 1 NC_006155.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 2071171 fliZ 2955625 fliZ Yersinia pseudotuberculosis IP 32953 flagella biosynthesis protein FliZ YP_070242.1 2070662 D 273123 CDS YP_070243.1 51596052 2957004 2071460..2072452 1 NC_006155.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2072452 YedO 2957004 YedO Yersinia pseudotuberculosis IP 32953 D-cysteine desulfhydrase YP_070243.1 2071460 D 273123 CDS YP_070244.1 51596053 2955624 2072576..2073376 1 NC_006155.1 similar to Yersinia pestis YPO1846 fliY; cystine-binding periplasmic protein (100% evalue=1.E-147); Escherichia coli b1920 fliY; polar amino acid transport system substrate-binding protein (74% evalue=1.E-112); cystine transporter subunit 2073376 fliY 2955624 fliY Yersinia pseudotuberculosis IP 32953 cystine transporter subunit YP_070244.1 2072576 D 273123 CDS YP_070245.1 51596054 2957003 2073376..2074038 1 NC_006155.1 similar to Yersinia pestis YPO1847 yecS; amino-acid ABC transporter (permease) (99% evalue=1.E-119); Escherichia coli Z3006 yecS; transport system permease (former yecC) (80.9% evalue=2.E-97); amino-acid ABC transporter permease 2074038 yecS 2957003 yecS Yersinia pseudotuberculosis IP 32953 amino-acid ABC transporter permease YP_070245.1 2073376 D 273123 CDS YP_070246.1 51596055 2957002 2074041..2074802 1 NC_006155.1 similar to Yersinia pestis YPO1848 yecC; amino-acid ABC transporter (ATP-binding protein) (100% evalue=1.E-140); Salmonella typhimurium STM1951 yecC; ABC-type polar amino acid transport system, ATPase component (77.8% evalue=1.E-103); amino-acid ABC transporter ATP-binding protein YecC 2074802 yecC 2957002 yecC Yersinia pseudotuberculosis IP 32953 amino-acid ABC transporter ATP-binding protein YecC YP_070246.1 2074041 D 273123 CDS YP_070247.1 51596056 2953791 complement(2075094..2075465) 1 NC_006155.1 similar to Yersinia pestis YPO1849 conserved hypothetical protein (100% evalue=3.E-55); hypothetical protein 2075465 2953791 YPTB1721 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070247.1 2075094 R 273123 CDS YP_070248.1 51596057 2953792 complement(2075465..2075800) 1 NC_006155.1 similar to Yersinia pestis YPO1850 hypothetical protein (99% evalue=4.E-62); hypothetical protein 2075800 2953792 YPTB1722 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070248.1 2075465 R 273123 CDS YP_070249.1 51596058 2956380 complement(2076296..2080267) 1 NC_006155.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2080267 putA 2956380 putA Yersinia pseudotuberculosis IP 32953 multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_070249.1 2076296 R 273123 CDS YP_070250.1 51596059 2956381 2080839..2082323 1 NC_006155.1 similar to Yersinia pestis YPO1853 putP; proline permease (100% evalue=0); Salmonella typhimurium STM1125 putP; SSS family, major sodium/proline symporter (81.2% evalue=0); SSS family proline symporter 2082323 putP 2956381 putP Yersinia pseudotuberculosis IP 32953 SSS family proline symporter YP_070250.1 2080839 D 273123 CDS YP_070251.1 51596060 2953793 2082647..2083504 1 NC_006155.1 similar to Yersinia pestis YPO1854 membrane protein (100% evalue=1.E-157); Escherichia coli ECs1263 cytochrome (76% evalue=1.E-121); oxidase dependent Fe+2 transporter 2083504 2953793 YPTB1725 Yersinia pseudotuberculosis IP 32953 oxidase dependent Fe+2 transporter YP_070251.1 2082647 D 273123 CDS YP_070252.1 51596061 2953794 2083534..2084658 1 NC_006155.1 similar to Yersinia pestis YPO1855 exported protein (98.9% evalue=0); Escherichia coli ECs1264 hypothetical protein (74.9% evalue=1.E-156); hypothetical protein 2084658 2953794 YPTB1726 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070252.1 2083534 D 273123 CDS YP_070253.1 51596062 2953795 2084669..2085973 1 NC_006155.1 similar to Yersinia pestis YPO1856 conserved hypothetical protein (99.7% evalue=0); Escherichia coli b1019 ycdB; hypothetical 46.8 kD protein in putP-phoH intergenic region precursor (ORF1) (72.1% evalue=1.E-174); hypothetical protein 2085973 2953795 YPTB1727 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070253.1 2084669 D 273123 CDS YP_070254.1 51596063 2956899 complement(2086059..2086658) 1 NC_006155.1 stationary phase that binds TrpR repressor; TrpR binding protein WrbA 2086658 wrbA 2956899 wrbA Yersinia pseudotuberculosis IP 32953 TrpR binding protein WrbA YP_070254.1 2086059 R 273123 CDS YP_070255.1 51596064 2953796 2087052..2088230 1 NC_006155.1 similar to Yersinia pestis YPO1858 exported protein (100% evalue=0); H. influenzae HI0148 hypothetical protein HI0148 (46.4% evalue=3.E-96); N-acetylneuraminic acid mutarotase 2088230 2953796 YPTB1729 Yersinia pseudotuberculosis IP 32953 N-acetylneuraminic acid mutarotase YP_070255.1 2087052 D 273123 CDS YP_070256.1 51596065 2955388 complement(2088356..2089780) 1 NC_006155.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease 2089780 cycA 2955388 cycA Yersinia pseudotuberculosis IP 32953 D-alanine/D-serine/glycine permease YP_070256.1 2088356 R 273123 CDS YP_070257.1 51596066 2955181 2090895..2091446 1 NC_006155.1 similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (45.3% evalue=5.E-38); attachment invasion locus protein 2091446 ail 2955181 ail Yersinia pseudotuberculosis IP 32953 attachment invasion locus protein YP_070257.1 2090895 D 273123 CDS YP_070258.1 51596067 2953797 2091786..2092040 1 NC_006155.1 similar to Yersinia pestis YPO1862 membrane protein (100% evalue=6.E-41); hypothetical protein 2092040 2953797 YPTB1732 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070258.1 2091786 D 273123 CDS YP_070259.1 51596068 2956994 complement(2092068..2092412) 1 NC_006155.1 similar to Yersinia pestis YPO1863 ydgC, glpM; membrane protein (100% evalue=3.E-60); Salmonella typhimurium STM1476 ydgC; inner membrane protein (61.2% evalue=1.E-36); hypothetical protein 2092412 ydgC 2956994 ydgC Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070259.1 2092068 R 273123 CDS YP_070260.1 51596069 2953798 complement(2092537..2092761) 1 NC_006155.1 similar to Yersinia pestis YPO1864 conserved hypothetical protein (100% evalue=9.E-35); Escherichia coli b1915 yecF; hypothetical 8.2 kD protein in uvrY-sdiA intergenic region (60.8% evalue=5.E-19); hypothetical protein 2092761 2953798 YPTB1734 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070260.1 2092537 R 273123 CDS YP_070261.1 51596070 2956885 2093424..2094080 1 NC_006155.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2094080 uvrY 2956885 uvrY Yersinia pseudotuberculosis IP 32953 response regulator YP_070261.1 2093424 D 273123 CDS YP_070262.2 161760580 2956883 2094052..2095905 1 NC_006155.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2095905 uvrC 2956883 uvrC Yersinia pseudotuberculosis IP 32953 excinuclease ABC subunit C YP_070262.2 2094052 D 273123 CDS YP_070263.1 51596072 2956246 2095964..2096512 1 NC_006155.1 similar to Yersinia pestis YPO1867 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (100% evalue=1.E-103); Salmonella typhimurium STM1945 pgsA; phosphatidylglycerophosphate synthetase (76.7% evalue=1.E-78); phosphatidylglycerophosphate synthetase 2096512 pgsA 2956246 pgsA Yersinia pseudotuberculosis IP 32953 phosphatidylglycerophosphate synthetase YP_070263.1 2095964 D 273123 CDS YP_070264.1 51596073 2956185 complement(2097207..2097422) 1 NC_006155.1 in E. coli K-12 this is in prophage P2 remnant; DNA-binding transcriptional regulator 2097422 ogrK 2956185 ogrK Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_070264.1 2097207 R 273123 CDS YP_070265.1 51596074 2953799 complement(2097514..2098680) 1 NC_006155.1 similar to Salmonella typhi STY3702 regulator of late gene expression (52.9% evalue=1.E-107); Salmonella typhi STY2882 bacteriophage late gene regulator (52.9% evalue=1.E-107); D protein bacteriophage 186 and P2 2098680 2953799 YPTB1739 Yersinia pseudotuberculosis IP 32953 D protein bacteriophage 186 and P2 YP_070265.1 2097514 R 273123 CDS YP_070266.1 51596075 2953800 complement(2098677..2099162) 1 NC_006155.1 similar to Salmonella typhi STY4602 phage tail protein (61% evalue=8.E-48); Salmonella typhi STY3701 phage tail protein (59% evalue=2.E-47); phage tail protein 2099162 2953800 YPTB1740 Yersinia pseudotuberculosis IP 32953 phage tail protein YP_070266.1 2098677 R 273123 CDS YP_070267.1 51596076 2953801 complement(2099162..2101588) 1 NC_006155.1 similar to Salmonella typhimurium STM2697 Fels-2 prophage:similar to orfG protein in phage 186 (34.2% evalue=1.E-100); Escherichia coli ECs2641 tail protein (35.5% evalue=1.E-101); bacteriophage P2 tail protein gpT 2101588 2953801 YPTB1741 Yersinia pseudotuberculosis IP 32953 bacteriophage P2 tail protein gpT YP_070267.1 2099162 R 273123 CDS YP_070268.1 51596077 2953802 complement(2101581..2101703) 1 NC_006155.1 similar to Salmonella typhi STY3699 hypothetical protein (66.6% evalue=4.E-07); Salmonella typhi STY2885 bacteriophage protein (66.6% evalue=4.E-07); phage protein 2101703 2953802 YPTB1742 Yersinia pseudotuberculosis IP 32953 phage protein YP_070268.1 2101581 R 273123 CDS YP_070269.1 51596078 2953803 complement(2101736..2102047) 1 NC_006155.1 similar to Salmonella typhi STY4605 phage tail protein (46.5% evalue=1.E-15); Ralstonia solanacearum RS03484 probable phage-related protein (50% evalue=1.E-15); tail protein gpE P2 bacteriophage 2102047 2953803 YPTB1743 Yersinia pseudotuberculosis IP 32953 tail protein gpE P2 bacteriophage YP_070269.1 2101736 R 273123 CDS YP_070270.1 51596079 2953804 complement(2102098..2102613) 1 NC_006155.1 similar to Salmonella typhi STY2887 probable major tail tube protein (59.4% evalue=1.E-54); Salmonella typhimurium STM2700 Fels-2 prophage: similar to genes in P2-like phages (60% evalue=4.E-55); tail tube protein FII (bacteriophage P2) 2102613 2953804 YPTB1744 Yersinia pseudotuberculosis IP 32953 tail tube protein FII (bacteriophage P2) YP_070270.1 2102098 R 273123 CDS YP_070271.1 51596080 2953805 complement(2102627..2103796) 1 NC_006155.1 similar to Salmonella typhi STY3696 probable major tail sheath protein (69.7% evalue=1.E-158); Salmonella typhi STY2888 bacteriophage major tail sheath protein (69.7% evalue=1.E-158); tail sheath protein (P2 and 186 bacteriophage) 2103796 2953805 YPTB1745 Yersinia pseudotuberculosis IP 32953 tail sheath protein (P2 and 186 bacteriophage) YP_070271.1 2102627 R 273123 CDS YP_070272.1 51596081 2953806 complement(2103924..2104406) 1 NC_006155.1 similar to Salmonella typhi STY3693 conserved hypothetical protein (39.1% evalue=2.E-08); Escherichia coli b2354 hypothetical protein (34.8% evalue=4.E-08); hypothetical protein 2104406 2953806 YPTB1746 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070272.1 2103924 R 273123 CDS YP_070273.1 51596082 2953807 complement(2104418..2105857) 1 NC_006155.1 similar to Salmonella typhi STY4611 probable phage tail fibre protein (71.6% evalue=9.E-71); Salmonella typhi STY3691 probable variable tail fibre protein (70.5% evalue=7.E-70); hypothetical protein 2105857 2953807 YPTB1747 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070273.1 2104418 R 273123 CDS YP_070274.1 51596083 2953808 complement(2105854..2106462) 1 NC_006155.1 similar to Salmonella typhi STY4612 phage tail protein (62.6% evalue=9.E-73); Salmonella typhi STY3690 phage tail protein (62.6% evalue=9.E-73); bacteriophage protein 2106462 2953808 YPTB1748 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_070274.1 2105854 R 273123 CDS YP_070275.1 51596084 2953809 complement(2106455..2107363) 1 NC_006155.1 similar to Salmonella typhi STY3689 phage baseplate assembly protein (64.5% evalue=1.E-109); Salmonella typhimurium STM2708 Fels-2 prophage: similar to tail fiber protein (gpI) in phage P2 (64.2% evalue=1.E-108); bacteriophage protein 2107363 2953809 YPTB1749 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_070275.1 2106455 R 273123 CDS YP_070276.1 51596085 2953810 complement(2107368..2107718) 1 NC_006155.1 similar to Salmonella typhi STY4614 phage baseplate assembly protein (63.8% evalue=3.E-33); Salmonella typhimurium STM2709 Fels-2 prophage: similar to gpJ, base plate of tail, in phage P2 (62.9% evalue=1.E-32); hypothetical protein 2107718 2953810 YPTB1750 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070276.1 2107368 R 273123 CDS YP_070277.1 51596086 2953811 complement(2107715..2108356) 1 NC_006155.1 similar to Salmonella typhi STY4615 phage baseplate assembly protein (46.6% evalue=6.E-46); Salmonella typhi STY3687 phage baseplate assembly protein (44.6% evalue=4.E-46); phage-related baseplate assembly protein 2108356 2953811 YPTB1751 Yersinia pseudotuberculosis IP 32953 phage-related baseplate assembly protein YP_070277.1 2107715 R 273123 CDS YP_070278.1 51596087 2953812 complement(2108430..2108879) 1 NC_006155.1 similar to Salmonella typhi STY3686 phage tail protein (43.9% evalue=2.E-28); Salmonella typhimurium STM2711 Fels-2 prophage: similar to gpS for completion of tail, in phage P2 (44.8% evalue=2.E-28); prophage tail completion protein 2108879 2953812 YPTB1752 Yersinia pseudotuberculosis IP 32953 prophage tail completion protein YP_070278.1 2108430 R 273123 CDS YP_070279.1 51596088 2953813 complement(2108876..2109331) 1 NC_006155.1 similar to Salmonella typhi STY3685 phage tail protein (41.9% evalue=3.E-24); Ralstonia solanacearum RS03499 probable tail completion-like protein (49.6% evalue=5.E-31); phage tail completion protein GpR 2109331 2953813 YPTB1753 Yersinia pseudotuberculosis IP 32953 phage tail completion protein GpR YP_070279.1 2108876 R 273123 CDS YP_070280.1 51596089 2953814 complement(2109427..2109843) 1 NC_006155.1 similar to Salmonella typhi STY4618 regulatory protein (32.8% evalue=5.E-15); Salmonella typhimurium STM2714 Fels-2 prophage: similar to lysis protein (lysB) in phage P2 (34% evalue=2.E-14); hypothetical protein 2109843 2953814 YPTB1754 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070280.1 2109427 R 273123 CDS YP_070281.1 51596090 2953815 complement(2109845..2110351) 1 NC_006155.1 similar to Salmonella typhi STY4620 nucD2; lysozyme (61.5% evalue=4.E-50); Salmonella typhimurium STM2715 Fels-2 prophage: probable prophage lysozyme (62.4% evalue=7.E-54); phage lysozyme 2110351 2953815 YPTB1755 Yersinia pseudotuberculosis IP 32953 phage lysozyme YP_070281.1 2109845 R 273123 CDS YP_070282.1 51596091 2953816 complement(2110335..2110556) 1 NC_006155.1 similar to Salmonella typhi STY3681 nucE; possible secretory protein (33.8% evalue=1.E-07); prophage Hp1 family holin 2110556 2953816 YPTB1756 Yersinia pseudotuberculosis IP 32953 prophage Hp1 family holin YP_070282.1 2110335 R 273123 CDS YP_070283.1 51596092 2953817 complement(2110547..2110750) 1 NC_006155.1 similar to Salmonella typhi STY4622 phage tail protein (64.1% evalue=1.E-19); Salmonella typhimurium STM2717 Fels-2 prophage: similar to gpX in phage P2 (64.1% evalue=2.E-19); phage-related tail protein 2110750 2953817 YPTB1757 Yersinia pseudotuberculosis IP 32953 phage-related tail protein YP_070283.1 2110547 R 273123 CDS YP_070284.1 51596093 2953818 complement(2110750..2111223) 1 NC_006155.1 similar to Salmonella typhi STY3679 capsid completion protein (44.6% evalue=4.E-29); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (44% evalue=1.E-28); phage head completion protein GpL 2111223 2953818 YPTB1758 Yersinia pseudotuberculosis IP 32953 phage head completion protein GpL YP_070284.1 2110750 R 273123 CDS YP_070285.1 51596094 2953819 complement(2111323..2111982) 1 NC_006155.1 similar to Salmonella typhi STY4624 phage terminase (48.8% evalue=3.E-48); Ralstonia solanacearum RS03505 probable bacteriophage protein (52.4% evalue=1.E-57); prophage small terminase subunit 2111982 2953819 YPTB1759 Yersinia pseudotuberculosis IP 32953 prophage small terminase subunit YP_070285.1 2111323 R 273123 CDS YP_070286.1 51596095 2953820 complement(2111986..2113224) 1 NC_006155.1 Bacteriophage PhiD266; similar to Salmonella typhi STY4625 major capsid protein (58.4% evalue=1.E-113); Salmonella typhimurium STM2720 Fels-2 prophage: similar to gpN, major capsid, in phage P2 (56.9% evalue=1.E-113); major capsid protein 2113224 2953820 YPTB1760 Yersinia pseudotuberculosis IP 32953 major capsid protein YP_070286.1 2111986 R 273123 CDS YP_070287.1 51596096 2953821 complement(2113301..2114155) 1 NC_006155.1 similar to Salmonella typhi STY3676 capsid scaffolding protein (50.8% evalue=2.E-68); Salmonella typhimurium STM2721 Fels-2 prophage: similar to gpO, capsid scaffold, in phage P2 (50.8% evalue=3.E-67); V protein bacteriophage 186 2114155 2953821 YPTB1761 Yersinia pseudotuberculosis IP 32953 V protein bacteriophage 186 YP_070287.1 2113301 R 273123 CDS YP_070288.1 51596097 2953822 2114304..2116076 1 NC_006155.1 similar to Salmonella typhi STY4627 probable terminase subunit (68.6% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (68.6% evalue=0); phage terminase subunit GpP 2116076 2953822 YPTB1762 Yersinia pseudotuberculosis IP 32953 phage terminase subunit GpP YP_070288.1 2114304 D 273123 CDS YP_070289.1 51596098 2953823 2116073..2116837 1 NC_006155.1 similar to Salmonella typhi STY3675 terminase, ATPase subunit (38.3% evalue=7.E-40); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (38.3% evalue=7.E-40); hypothetical protein 2116837 2953823 YPTB1763 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070289.1 2116073 D 273123 CDS YP_070290.1 51596099 2953824 2116834..2117871 1 NC_006155.1 similar to Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (70.4% evalue=1.E-134); Ralstonia solanacearum RS03510 probable bacteriophage protein (64.8% evalue=1.E-133); capsid portal protein 2117871 2953824 YPTB1764 Yersinia pseudotuberculosis IP 32953 capsid portal protein YP_070290.1 2116834 D 273123 CDS YP_070291.1 51596100 2953825 complement(2118623..2118982) 1 NC_006155.1 hypothetical protein 2118982 2953825 YPTB1765 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070291.1 2118623 R 273123 CDS YP_070292.1 51596101 2953826 complement(2119005..2121287) 1 NC_006155.1 similar to Salmonella typhi STY3668 possible endonuclease (34.4% evalue=1.E-63); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (32.8% evalue=2.E-63); phage P2 replication protein 2121287 2953826 YPTB1766 Yersinia pseudotuberculosis IP 32953 phage P2 replication protein YP_070292.1 2119005 R 273123 CDS YP_070293.1 51596102 2953827 complement(2121274..2121546) 1 NC_006155.1 hypothetical protein 2121546 2953827 YPTB1767 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070293.1 2121274 R 273123 CDS YP_070294.1 51596103 2953828 complement(2121612..2121923) 1 NC_006155.1 gpB bacteriophage P2 2121923 2953828 YPTB1768 Yersinia pseudotuberculosis IP 32953 gpB bacteriophage P2 YP_070294.1 2121612 R 273123 CDS YP_070295.1 51596104 2953829 complement(2122130..2122639) 1 NC_006155.1 similar to Salmonella typhi STY3662 cII; regulatory protein cII (52.9% evalue=2.E-48); Salmonella typhimurium STM2736 Fels-2 prophage: similar to retron in E coli and to protein cII of phages (51.7% evalue=4.E-48); regulatory protein CII bacteriophage 186 2122639 2953829 YPTB1769 Yersinia pseudotuberculosis IP 32953 regulatory protein CII bacteriophage 186 YP_070295.1 2122130 R 273123 CDS YP_070296.1 51596105 2953830 complement(2122694..2122891) 1 NC_006155.1 similar to Escherichia coli ECs2622 DNA-binding protein (48.2% evalue=2.E-09); Escherichia coli Z2970 coxT; regulator for prophage CP-933T (48.2% evalue=2.E-09); prophage regulator 2122891 2953830 YPTB1770 Yersinia pseudotuberculosis IP 32953 prophage regulator YP_070296.1 2122694 R 273123 CDS YP_070297.1 51596106 2953831 2122962..2123573 1 NC_006155.1 similar to Salmonella typhi STY4644 cI; phage repressor protein cI (35.4% evalue=2.E-22); Salmonella typhi STY3660 cI; repressor protein (34% evalue=1.E-24); CI repressor of phage 186 and others 2123573 2953831 YPTB1771 Yersinia pseudotuberculosis IP 32953 CI repressor of phage 186 and others YP_070297.1 2122962 D 273123 CDS YP_070298.1 51596107 2953832 2123601..2124872 1 NC_006155.1 similar to Sulfolobus tokodaii ST2108 hypothetical purine NTPase (21.9% evalue=6.E-07); Salmonella typhimurium STM2746 Excinuclease ATPase subunit (44.9% evalue=8.E-97); hypothetical protein 2124872 2953832 YPTB1772 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070298.1 2123601 D 273123 CDS YP_070299.1 51596108 2953833 2124872..2125750 1 NC_006155.1 similar to Salmonella typhimurium STM2747 cytoplasmic protein (41.8% evalue=9.E-64); hypothetical protein 2125750 2953833 YPTB1773 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070299.1 2124872 D 273123 CDS YP_070300.1 51596109 2953834 2125870..2126925 1 NC_006155.1 similar to Escherichia coli ECs2617 integrase (57.9% evalue=1.E-110); Escherichia coli Z2966 intT; integrase for prophage CP-933T (57.9% evalue=1.E-110); integrase 2126925 2953834 YPTB1774 Yersinia pseudotuberculosis IP 32953 integrase YP_070300.1 2125870 D 273123 CDS YP_070301.1 51596110 2953835 2126922..2127968 1 NC_006155.1 hypothetical protein 2127968 2953835 YPTB1775 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070301.1 2126922 D 273123 CDS YP_070302.1 51596111 2953836 complement(2128303..2129325) 1 NC_006155.1 similar to Escherichia coli ECs2773 integrase (46.8% evalue=7.E-79); Escherichia coli Z3130 intU; integrase for prophage CP-933U (46.8% evalue=7.E-79); integrase 2129325 2953836 YPTB1776 Yersinia pseudotuberculosis IP 32953 integrase YP_070302.1 2128303 R 273123 CDS YP_070303.1 51596112 2953837 complement(2129645..2130148) 1 NC_006155.1 hypothetical protein 2130148 2953837 YPTB1777 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070303.1 2129645 R 273123 CDS YP_070304.1 51596113 2953838 complement(2130242..2130580) 1 NC_006155.1 hypothetical protein 2130580 2953838 YPTB1778 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070304.1 2130242 R 273123 CDS YP_070305.1 51596114 2953839 complement(2130712..2131575) 1 NC_006155.1 hypothetical protein 2131575 2953839 YPTB1779 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070305.1 2130712 R 273123 CDS YP_070306.1 51596115 2953840 complement(2131934..2132170) 1 NC_006155.1 hypothetical protein 2132170 2953840 YPTB1780 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070306.1 2131934 R 273123 CDS YP_070307.1 51596116 2953841 complement(2132407..2132835) 1 NC_006155.1 hypothetical protein 2132835 2953841 YPTB1781 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070307.1 2132407 R 273123 CDS YP_070308.1 51596117 2953842 complement(2132832..2133971) 1 NC_006155.1 hypothetical protein 2133971 2953842 YPTB1782 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070308.1 2132832 R 273123 CDS YP_070309.1 51596118 2953843 complement(2134016..2135620) 1 NC_006155.1 similar to Xylella fastidiosa XF1647 hypothetical protein (36.3% evalue=2.E-73); hypothetical protein 2135620 2953843 YPTB1783 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070309.1 2134016 R 273123 CDS YP_070310.1 51596119 2953844 complement(2135607..2136449) 1 NC_006155.1 similar to Xylella fastidiosa XF1648 hypothetical protein (46% evalue=4.E-55); hypothetical protein 2136449 2953844 YPTB1784 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070310.1 2135607 R 273123 CDS YP_070311.1 51596120 2953845 complement(2136750..2137088) 1 NC_006155.1 hypothetical protein 2137088 2953845 YPTB1785 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070311.1 2136750 R 273123 CDS YP_070312.1 51596121 2953846 complement(2137092..2137598) 1 NC_006155.1 hypothetical protein 2137598 2953846 YPTB1786 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070312.1 2137092 R 273123 CDS YP_070313.1 51596122 2953847 complement(2138463..2138732) 1 NC_006155.1 hypothetical protein 2138732 2953847 YPTB1787 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070313.1 2138463 R 273123 CDS YP_070314.1 51596123 2953848 complement(2138817..2139062) 1 NC_006155.1 hypothetical protein 2139062 2953848 YPTB1788 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070314.1 2138817 R 273123 CDS YP_070315.1 51596124 2953849 complement(2139340..2139957) 1 NC_006155.1 hypothetical protein 2139957 2953849 YPTB1789 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070315.1 2139340 R 273123 CDS YP_070316.1 51596125 2953850 complement(2139968..2140654) 1 NC_006155.1 similar to Yersinia pestis YPO1233 prophage repressor protein (46.9% evalue=2.E-49); Escherichia coli ECs0274 repressor protein CI (36.2% evalue=4.E-30); prophage repressor protein 2140654 2953850 YPTB1790 Yersinia pseudotuberculosis IP 32953 prophage repressor protein YP_070316.1 2139968 R 273123 CDS YP_070317.1 51596126 2953851 2140734..2141024 1 NC_006155.1 hypothetical protein 2141024 2953851 YPTB1791 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070317.1 2140734 D 273123 CDS YP_070318.1 51596127 2953852 2141042..2141404 1 NC_006155.1 hypothetical protein 2141404 2953852 YPTB1792 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070318.1 2141042 D 273123 CDS YP_070319.1 51596128 2953853 2141589..2142434 1 NC_006155.1 similar to Anabaena all7134 hypothetical protein (26.8% evalue=2.E-08); hypothetical protein 2142434 2953853 YPTB1793 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070319.1 2141589 D 273123 CDS YP_070320.1 51596129 2953854 2142438..2143214 1 NC_006155.1 hypothetical protein 2143214 2953854 YPTB1794 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070320.1 2142438 D 273123 CDS YP_070321.1 51596130 2956410 2143218..2144354 1 NC_006155.1 Required for efficient pilin antigenic variation; recombination associated protein 2144354 rdgC 2956410 rdgC Yersinia pseudotuberculosis IP 32953 recombination associated protein YP_070321.1 2143218 D 273123 CDS YP_070322.1 51596131 2953855 2144354..2144701 1 NC_006155.1 hypothetical protein 2144701 2953855 YPTB1796 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070322.1 2144354 D 273123 CDS YP_070323.1 51596132 2953856 2144698..2145624 1 NC_006155.1 similar to Xylella fastidiosa XF0641 DNA methyltransferase (32% evalue=6.E-36); Caulobacter crescentus CC0378 modification methylase CcrMI (27.6% evalue=4.E-17); DNA methyltransferase 2145624 2953856 YPTB1797 Yersinia pseudotuberculosis IP 32953 DNA methyltransferase YP_070323.1 2144698 D 273123 CDS YP_070324.1 51596133 2957017 2145621..2146496 1 NC_006155.1 similar to Escherichia coli b2356 yfdM; hypothetical protein (61.3% evalue=1.E-28); Escherichia coli JW2352 yfdM; Hypothetical protein (61.3% evalue=1.E-28); hypothetical protein 2146496 yfdM 2957017 yfdM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070324.1 2145621 D 273123 CDS YP_070325.1 51596134 2953857 2146493..2148238 1 NC_006155.1 similar to Mesorhizobium loti mlr8517 modification methylase (33.5% evalue=1.E-81); modification methylase 2148238 2953857 YPTB1799 Yersinia pseudotuberculosis IP 32953 modification methylase YP_070325.1 2146493 D 273123 CDS YP_070326.1 51596135 2953858 2148235..2148882 1 NC_006155.1 similar to Escherichia coli ECs1956 hypothetical protein (31.8% evalue=2.E-16); Escherichia coli Z2385 unknown protein encoded within prophage CP-933R (31.8% evalue=2.E-16); hypothetical protein 2148882 2953858 YPTB1800 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070326.1 2148235 D 273123 CDS YP_070327.1 51596136 2953859 2149276..2150211 1 NC_006155.1 hypothetical protein 2150211 2953859 YPTB1801 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070327.1 2149276 D 273123 CDS YP_070328.1 51596137 2953860 2150208..2150666 1 NC_006155.1 hypothetical protein 2150666 2953860 YPTB1802 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070328.1 2150208 D 273123 CDS YP_070329.1 51596138 2953861 2150978..2151787 1 NC_006155.1 hypothetical protein 2151787 2953861 YPTB1803 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070329.1 2150978 D 273123 CDS YP_070330.1 51596139 2953862 2151960..2152172 1 NC_006155.1 similar to Escherichia coli ECs2969 holin protein (65.2% evalue=5.E-22); Escherichia coli Z1468 lysis protein S of bacteriophage BP-933W (65.2% evalue=5.E-22); holin protein 2152172 2953862 YPTB1804 Yersinia pseudotuberculosis IP 32953 holin protein YP_070330.1 2151960 D 273123 CDS YP_070331.1 51596140 2953863 2152172..2152660 1 NC_006155.1 similar to Escherichia coli ECs0819 probable endolysin (lysis protein) (lysozyme) (56.5% evalue=2.E-46); Escherichia coli Z0960 lysozyme protein R of prophage CP-933K (56.5% evalue=2.E-46); endolysin 2152660 2953863 YPTB1805 Yersinia pseudotuberculosis IP 32953 endolysin YP_070331.1 2152172 D 273123 CDS YP_070332.1 51596141 2953864 2152792..2153310 1 NC_006155.1 hypothetical protein 2153310 2953864 YPTB1806 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070332.1 2152792 D 273123 CDS YP_070333.1 51596142 2953865 2153528..2153968 1 NC_006155.1 hypothetical protein 2153968 2953865 YPTB1807 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070333.1 2153528 D 273123 CDS YP_070334.1 51596143 2953866 2154075..2155097 1 NC_006155.1 similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase IS100 2155097 2953866 YPTB1808 Yersinia pseudotuberculosis IP 32953 transposase IS100 YP_070334.1 2154075 D 273123 CDS YP_070335.1 51596144 2953867 2155097..2155876 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 2155876 2953867 YPTB1809 Yersinia pseudotuberculosis IP 32953 transposase/IS protein YP_070335.1 2155097 D 273123 CDS YP_070336.1 51596145 2953868 2155994..2156851 1 NC_006155.1 similar to Escherichia coli ECs1219 small subunit terminase (39.4% evalue=1.E-47); Escherichia coli Z1475 terminase small subunit of bacteriophage BP-933W (39.4% evalue=1.E-47); small subunit bacteriophage terminase 2156851 2953868 YPTB1810 Yersinia pseudotuberculosis IP 32953 small subunit bacteriophage terminase YP_070336.1 2155994 D 273123 CDS YP_070337.1 51596146 2953869 2156848..2158554 1 NC_006155.1 similar to Escherichia coli ECs1220 terminase large subunit (70.5% evalue=0); Escherichia coli Z1476 partial terminase large subunit of bacteriophage BP-933W (70.5% evalue=0); bacteriophage terminase large subunit 2158554 2953869 YPTB1811 Yersinia pseudotuberculosis IP 32953 bacteriophage terminase large subunit YP_070337.1 2156848 D 273123 CDS YP_070338.1 51596147 2953870 2158554..2160674 1 NC_006155.1 similar to Escherichia coli ECs1221 portal protein (68.8% evalue=0); Escherichia coli Z1477 portal protein of bacteriophage BP-933W (68.8% evalue=0); phage portal protein 2160674 2953870 YPTB1812 Yersinia pseudotuberculosis IP 32953 phage portal protein YP_070338.1 2158554 D 273123 CDS YP_070339.1 51596148 2953871 2160944..2161993 1 NC_006155.1 similar to Escherichia coli ECs1222 hypothetical protein (41.8% evalue=3.E-68); Escherichia coli Z1478 unknown protein encoded by bacteriophage BP-933W (41.8% evalue=3.E-68); phage l protein 2161993 2953871 YPTB1813 Yersinia pseudotuberculosis IP 32953 phage l protein YP_070339.1 2160944 D 273123 CDS YP_070340.1 51596149 2953872 2162053..2163276 1 NC_006155.1 similar to Escherichia coli ECs1223 hypothetical protein (72.8% evalue=1.E-174); Escherichia coli Z1479 unknown protein encoded by bacteriophage BP-933W (72.8% evalue=1.E-174); hypothetical protein 2163276 2953872 YPTB1814 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070340.1 2162053 D 273123 CDS YP_070341.1 51596150 2953873 2163354..2163737 1 NC_006155.1 similar to Escherichia coli ECs1224 hypothetical protein (40% evalue=1.E-16); Escherichia coli Z1480 unknown protein encoded by bacteriophage BP-933W (40% evalue=1.E-16); hypothetical protein 2163737 2953873 YPTB1815 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070341.1 2163354 D 273123 CDS YP_070342.1 51596151 2953874 2163803..2164255 1 NC_006155.1 similar to Escherichia coli ECs1225 hypothetical protein (52.7% evalue=3.E-35); Escherichia coli Z1481 unknown protein encoded by bacteriophage BP-933W (52.7% evalue=3.E-35); hypothetical protein 2164255 2953874 YPTB1816 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070342.1 2163803 D 273123 CDS YP_070343.1 51596152 2953875 2164258..2164854 1 NC_006155.1 similar to Escherichia coli ECs1226 hypothetical protein (37.8% evalue=1.E-30); hypothetical protein 2164854 2953875 YPTB1817 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070343.1 2164258 D 273123 CDS YP_070344.1 51596153 2953876 2164854..2165507 1 NC_006155.1 similar to Escherichia coli ECs1227 hypothetical protein (58.7% evalue=6.E-69); Escherichia coli Z1482 unknown protein encoded by bacteriophage BP-933W (58.7% evalue=6.E-69); hypothetical protein 2165507 2953876 YPTB1818 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070344.1 2164854 D 273123 CDS YP_070345.1 51596154 2953877 2165504..2167639 1 NC_006155.1 similar to Yersinia pestis YPO2133 hypothetical phage protein (85.9% evalue=9.E-62); hypothetical protein 2167639 2953877 YPTB1819 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070345.1 2165504 D 273123 CDS YP_070346.1 51596155 2953878 2167650..2168114 1 NC_006155.1 similar to Yersinia pestis YPO2134 phage tail fiber assembly protein (86.3% evalue=5.E-67); Escherichia coli ECs1651 tail fiber assembly protein (31.8% evalue=6.E-10); phage tail fiber assembly protein 2168114 2953878 YPTB1820 Yersinia pseudotuberculosis IP 32953 phage tail fiber assembly protein YP_070346.1 2167650 D 273123 CDS YP_070347.1 51596156 2953879 complement(2168127..2168453) 1 NC_006155.1 similar to Yersinia pestis YPO1788 acyl carrier protein (70.3% evalue=9.E-40); Salmonella typhimurium STM2011 cytoplasmic protein (64.8% evalue=2.E-37); acyl carrier protein 2168453 2953879 YPTB1821 Yersinia pseudotuberculosis IP 32953 acyl carrier protein YP_070347.1 2168127 R 273123 CDS YP_070348.1 51596157 2953880 complement(2168447..2168911) 1 NC_006155.1 similar to Yersinia pestis YPO1789 membrane protein (76.6% evalue=2.E-62); Salmonella typhi STY2214 hypothetical protein (74% evalue=2.E-50); hypothetical protein 2168911 2953880 YPTB1822 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070348.1 2168447 R 273123 CDS YP_070349.1 51596158 2953881 2169143..2170771 1 NC_006155.1 similar to Escherichia coli ECs1232 hypothetical protein (56.1% evalue=1.E-176); Escherichia coli Z1486 unknown protein encoded by bacteriophage BP-933W (56.1% evalue=1.E-176); hypothetical protein 2170771 2953881 YPTB1823 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070349.1 2169143 D 273123 CDS YP_070350.1 51596159 2953882 2170768..2171874 1 NC_006155.1 similar to Escherichia coli ECs1233 tail tip fiber protein (47.9% evalue=1.E-101); Escherichia coli Z1487 unknown protein encoded by bacteriophage BP-933W (49.7% evalue=1.E-104); hypothetical protein 2171874 2953882 YPTB1824 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070350.1 2170768 D 273123 CDS YP_070351.1 51596160 2953883 2171941..2172972 1 NC_006155.1 similar to Yersinia pestis YPO2132 hypothetical phage protein (26.9% evalue=1.E-07); hypothetical protein 2172972 2953883 YPTB1825 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070351.1 2171941 D 273123 CDS YP_070352.1 51596161 2953884 2172947..2173321 1 NC_006155.1 similar to Escherichia coli ECs1237 hypothetical protein (53.8% evalue=5.E-31); Escherichia coli Z1490 unknown protein encoded by bacteriophage BP-933W (53.8% evalue=5.E-31); hypothetical protein 2173321 2953884 YPTB1826 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070352.1 2172947 D 273123 CDS YP_070353.1 51596162 2953885 2173329..2173934 1 NC_006155.1 similar to Escherichia coli ECs1238 hypothetical protein (53% evalue=2.E-51); Escherichia coli Z1491 unknown protein encoded by bacteriophage BP-933W (53% evalue=2.E-51); hypothetical protein 2173934 2953885 YPTB1827 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070353.1 2173329 D 273123 CDS YP_070354.1 51596163 2953886 2173950..2174333 1 NC_006155.1 similar to Escherichia coli ECs1239 hypothetical protein (58.4% evalue=1.E-33); Escherichia coli Z1492 unknown protein encoded by bacteriophage BP-933W (58.4% evalue=1.E-33); hypothetical protein 2174333 2953886 YPTB1828 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070354.1 2173950 D 273123 CDS YP_070355.1 51596164 2953887 2174333..2174572 1 NC_006155.1 similar to Escherichia coli ECs1240 hypothetical protein (46.9% evalue=4.E-15); Escherichia coli Z1493 unknown protein encoded by bacteriophage BP-933W (46.9% evalue=4.E-15); hypothetical protein 2174572 2953887 YPTB1829 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070355.1 2174333 D 273123 CDS YP_070356.1 51596165 2953888 2174583..2175974 1 NC_006155.1 similar to Escherichia coli ECs1241 hypothetical protein (28.4% evalue=6.E-40); Escherichia coli Z1494 unknown protein encoded by bacteriophage BP-933W (28.4% evalue=6.E-40); hypothetical protein 2175974 2953888 YPTB1830 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070356.1 2174583 D 273123 CDS YP_070357.1 51596166 2953889 2176308..2182709 1 NC_006155.1 similar to Escherichia coli ECs1242 hypothetical protein (40.4% evalue=0); hypothetical protein 2182709 2953889 YPTB1831 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070357.1 2176308 D 273123 CDS YP_070358.1 51596167 2953890 2182663..2184330 1 NC_006155.1 hypothetical protein 2184330 2953890 YPTB1832 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070358.1 2182663 D 273123 CDS YP_070359.1 51596168 2953891 complement(2184581..2184985) 1 NC_006155.1 hypothetical protein 2184985 2953891 YPTB1833 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070359.1 2184581 R 273123 CDS YP_070360.1 51596169 2956186 complement(2185864..2186037) 1 NC_006155.1 similar to Salmonella typhi STY3703 positive regulator of late gene transcription (66% evalue=6.E-16); Escherichia coli JW2067 ogrK; Ogr protein (62.5% evalue=6.E-16); prophage p2 Ogr protein 2186037 ogrK 2956186 ogrK Yersinia pseudotuberculosis IP 32953 prophage p2 Ogr protein YP_070360.1 2185864 R 273123 CDS YP_070361.1 51596170 2953892 complement(2186112..2187206) 1 NC_006155.1 similar to Salmonella typhi STY3702 regulator of late gene expression (65.1% evalue=1.E-137); Salmonella typhi STY2882 bacteriophage late gene regulator (65.1% evalue=1.E-137); bacteriophage P2 GPD protein 2187206 2953892 YPTB1835 Yersinia pseudotuberculosis IP 32953 bacteriophage P2 GPD protein YP_070361.1 2186112 R 273123 CDS YP_070362.1 51596171 2953893 complement(2187203..2187667) 1 NC_006155.1 similar to Salmonella typhi STY4602 phage tail protein (58.7% evalue=3.E-49); Salmonella typhimurium STM2696 Fels-2 prophage: similar to genes in phage phiCTX (58.7% evalue=2.E-49); bacteriophage P2 tail protein 2187667 2953893 YPTB1836 Yersinia pseudotuberculosis IP 32953 bacteriophage P2 tail protein YP_070362.1 2187203 R 273123 CDS YP_070363.1 51596172 2953894 complement(2187679..2190594) 1 NC_006155.1 similar to Salmonella typhi STY3700 hypothetical protein (30.2% evalue=1.E-114); Salmonella typhi STY2884 bacteriophage tail protein (30.2% evalue=1.E-114); tail fiber component T of bacteriophage P2 2190594 2953894 YPTB1837 Yersinia pseudotuberculosis IP 32953 tail fiber component T of bacteriophage P2 YP_070363.1 2187679 R 273123 CDS YP_070364.1 51596173 2953895 complement(2190587..2190709) 1 NC_006155.1 similar to Salmonella typhi STY3699 hypothetical protein (64.1% evalue=1.E-08); Salmonella typhi STY2885 bacteriophage protein (64.1% evalue=1.E-08); phage protein 2190709 2953895 YPTB1838 Yersinia pseudotuberculosis IP 32953 phage protein YP_070364.1 2190587 R 273123 CDS YP_070365.1 51596174 2953896 complement(2190721..2191068) 1 NC_006155.1 similar to Salmonella typhi STY4605 phage tail protein (50% evalue=2.E-20); Salmonella typhimurium STM2699 Fels-2 prophage: similar to genes in P2-like phages (51.6% evalue=3.E-20); hypothetical protein 2191068 2953896 YPTB1839 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070365.1 2190721 R 273123 CDS YP_070366.1 51596175 2953897 complement(2191122..2191637) 1 NC_006155.1 similar to Salmonella typhi STY2887 probable major tail tube protein (60.2% evalue=5.E-58); Salmonella typhimurium STM2700 Fels-2 prophage: similar to genes in P2-like phages (61.4% evalue=2.E-58); P2 tail tube protein 2191637 2953897 YPTB1840 Yersinia pseudotuberculosis IP 32953 P2 tail tube protein YP_070366.1 2191122 R 273123 CDS YP_070367.1 51596176 2953898 complement(2191649..2192824) 1 NC_006155.1 similar to Salmonella typhi STY3696 probable major tail sheath protein (78.9% evalue=1.E-180); Salmonella typhi STY2888 bacteriophage major tail sheath protein (78.9% evalue=1.E-180); bacteriophage P2 tail sheath protein 2192824 2953898 YPTB1841 Yersinia pseudotuberculosis IP 32953 bacteriophage P2 tail sheath protein YP_070367.1 2191649 R 273123 CDS YP_070368.1 51596177 2953899 complement(2192958..2193437) 1 NC_006155.1 similar to Salmonella typhi STY3693 conserved hypothetical protein (39.1% evalue=2.E-08); Escherichia coli b2354 hypothetical protein (34.8% evalue=4.E-08); hypothetical protein 2193437 2953899 YPTB1842 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070368.1 2192958 R 273123 CDS YP_070369.1 51596178 2953900 complement(2193449..2194888) 1 NC_006155.1 similar to Salmonella typhi STY4611 probable phage tail fibre protein (73.3% evalue=2.E-72); Salmonella typhimurium STM2706 Fels-2 prophage: similar to tail fiber protein in phage P2 (73.8% evalue=9.E-73); hypothetical protein 2194888 2953900 YPTB1843 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070369.1 2193449 R 273123 CDS YP_070370.1 51596179 2953901 complement(2194885..2195493) 1 NC_006155.1 similar to Salmonella typhi STY4612 phage tail protein (59.8% evalue=3.E-69); Salmonella typhi STY3690 phage tail protein (59.8% evalue=3.E-69); bacteriophage P2 protein 2195493 2953901 YPTB1844 Yersinia pseudotuberculosis IP 32953 bacteriophage P2 protein YP_070370.1 2194885 R 273123 CDS YP_070371.1 51596180 2953902 complement(2195486..2196394) 1 NC_006155.1 similar to Salmonella typhi STY4613 probable phage baseplate assembly protein (66.8% evalue=1.E-111); Salmonella typhi STY3689 phage baseplate assembly protein (67.5% evalue=1.E-113); bacteriophage P2-like protein 2196394 2953902 YPTB1845 Yersinia pseudotuberculosis IP 32953 bacteriophage P2-like protein YP_070371.1 2195486 R 273123 CDS YP_070372.1 51596181 2953903 complement(2196397..2196750) 1 NC_006155.1 similar to Yersinia pestis YPO1880 phage-related protein (95% evalue=2.E-38); Salmonella typhi STY3688 phage baseplate assembly protein (61.2% evalue=1.E-32); hypothetical protein 2196750 2953903 YPTB1846 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070372.1 2196397 R 273123 CDS YP_070373.1 51596182 2953904 complement(2196747..2197382) 1 NC_006155.1 similar to Salmonella typhi STY4615 phage baseplate assembly protein (45.9% evalue=1.E-43); Salmonella typhi STY3687 phage baseplate assembly protein (46.4% evalue=6.E-44); phage baseplate assembly protein V 2197382 2953904 YPTB1847 Yersinia pseudotuberculosis IP 32953 phage baseplate assembly protein V YP_070373.1 2196747 R 273123 CDS YP_070374.1 51596183 2953905 complement(2197713..2198429) 1 NC_006155.1 downstream intergenic space has region identical to intergenic region downstream of IS285 in Yersinia pestis; hypothetical protein 2198429 2953905 YPTB1848 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070374.1 2197713 R 273123 CDS YP_070375.1 51596184 2953906 complement(2198746..2199192) 1 NC_006155.1 similar to Salmonella typhi STY3686 phage tail protein (52% evalue=1.E-38); Salmonella typhimurium STM2711 Fels-2 prophage: similar to gpS for completion of tail, in phage P2 (49.6% evalue=3.E-37); O protein 2199192 2953906 YPTB1849 Yersinia pseudotuberculosis IP 32953 O protein YP_070375.1 2198746 R 273123 CDS YP_070376.1 51596185 2953907 complement(2199189..2199656) 1 NC_006155.1 similar to Salmonella typhimurium STM2712 Fels-2 prophage: similar to gpR for completion of tail, in phage P2 (52.5% evalue=4.E-35); Ralstonia solanacearum RS03499 probable tail completion-like protein (53% evalue=1.E-35); P2 phage tail completion protein R 2199656 2953907 YPTB1850 Yersinia pseudotuberculosis IP 32953 P2 phage tail completion protein R YP_070376.1 2199189 R 273123 CDS YP_070377.1 51596186 2953908 complement(2199755..2200180) 1 NC_006155.1 similar to Salmonella typhi STY3684 regulatory protein (49.2% evalue=1.E-26); Salmonella typhimurium STM2714 Fels-2 prophage: similar to lysis protein (lysB) in phage P2 (47.7% evalue=4.E-25); hypothetical protein 2200180 2953908 YPTB1851 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070377.1 2199755 R 273123 CDS YP_070378.1 51596187 2953909 complement(2200185..2200580) 1 NC_006155.1 similar to Agrobacterium tumefaciens Atu0462 endolysin (56.4% evalue=3.E-38); Agrobacterium tumefaciens AGR_C_820 gp19 (56.4% evalue=3.E-38); bacteriophage P7-like protein 2200580 2953909 YPTB1852 Yersinia pseudotuberculosis IP 32953 bacteriophage P7-like protein YP_070378.1 2200185 R 273123 CDS YP_070379.1 51596188 2953910 complement(2200567..2200953) 1 NC_006155.1 hypothetical protein 2200953 2953910 YPTB1853 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070379.1 2200567 R 273123 CDS YP_070380.1 51596189 2953911 complement(2200983..2201186) 1 NC_006155.1 similar to Salmonella typhi STY4622 phage tail protein (70.1% evalue=2.E-24); Salmonella typhimurium STM2717 Fels-2 prophage: similar to gpX in phage P2 (70.1% evalue=2.E-24); WPhiphage-related tail protein 2201186 2953911 YPTB1854 Yersinia pseudotuberculosis IP 32953 WPhiphage-related tail protein YP_070380.1 2200983 R 273123 CDS YP_070381.1 51596190 2953912 complement(2201186..2201677) 1 NC_006155.1 similar to Salmonella typhi STY3679 capsid completion protein (46.8% evalue=3.E-31); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (46.2% evalue=2.E-30); orf4 of phage P2 (gene L) 2201677 2953912 YPTB1855 Yersinia pseudotuberculosis IP 32953 orf4 of phage P2 (gene L) YP_070381.1 2201186 R 273123 CDS YP_070382.1 51596191 2953913 complement(2201911..2202564) 1 NC_006155.1 similar to Salmonella typhi STY3678 terminase, endonuclease subunit (38.9% evalue=6.E-37); Ralstonia solanacearum RS03505 probable bacteriophage protein (38.4% evalue=6.E-41); R protein bacteriophage 186 gb|AAC34151.1| 2202564 2953913 YPTB1856 Yersinia pseudotuberculosis IP 32953 R protein bacteriophage 186 gb|AAC34151.1| YP_070382.1 2201911 R 273123 CDS YP_070383.1 51596192 2953914 complement(2202571..2203626) 1 NC_006155.1 Bacteriophage PhiD5; similar to Salmonella typhi STY4625 major capsid protein (62.4% evalue=1.E-124); Salmonella typhi STY3677 major capsid protein (63% evalue=1.E-124); major capsid protein 2203626 2953914 YPTB1857 Yersinia pseudotuberculosis IP 32953 major capsid protein YP_070383.1 2202571 R 273123 CDS YP_070384.1 51596193 2953915 complement(2203663..2204478) 1 NC_006155.1 similar to Salmonella typhi STY4626 capsid protein (59.5% evalue=2.E-82); Salmonella typhi STY3676 capsid scaffolding protein (61.8% evalue=5.E-85); V protein phage 186 2204478 2953915 YPTB1858 Yersinia pseudotuberculosis IP 32953 V protein phage 186 YP_070384.1 2203663 R 273123 CDS YP_070385.1 51596194 2953916 2204649..2206412 1 NC_006155.1 similar to Salmonella typhi STY4627 probable terminase subunit (63.8% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (63.7% evalue=0); gpP phage P2 terminase 2206412 2953916 YPTB1859 Yersinia pseudotuberculosis IP 32953 gpP phage P2 terminase YP_070385.1 2204649 D 273123 CDS YP_070386.1 51596195 2953917 2206460..2207452 1 NC_006155.1 similar to Salmonella typhi STY4628 probable capsid portal protein (65.9% evalue=1.E-130); Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (67.2% evalue=1.E-132); capsid portal protein 2207452 2953917 YPTB1860 Yersinia pseudotuberculosis IP 32953 capsid portal protein YP_070386.1 2206460 D 273123 CDS YP_070387.1 51596196 2953918 complement(2208134..2208478) 1 NC_006155.1 bacteriophage protein gp46 2208478 2953918 YPTB1861 Yersinia pseudotuberculosis IP 32953 bacteriophage protein gp46 YP_070387.1 2208134 R 273123 CDS YP_070388.1 51596197 2953919 complement(2208686..2211241) 1 NC_006155.1 similar to Salmonella typhi STY3668 possible endonuclease (35.8% evalue=1.E-129); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (36.9% evalue=1.E-130); phage replication protein 2211241 2953919 YPTB1862 Yersinia pseudotuberculosis IP 32953 phage replication protein YP_070388.1 2208686 R 273123 CDS YP_070389.1 51596198 2955424 complement(2211330..2212148) 1 NC_006155.1 similar to Salmonella typhi STY4636 DNA adenine methylase (54% evalue=2.E-74); Salmonella typhi STY3667 DNA adenine methylase (55% evalue=5.E-76); DNA adenine methylase 2212148 dam 2955424 dam Yersinia pseudotuberculosis IP 32953 DNA adenine methylase YP_070389.1 2211330 R 273123 CDS YP_070390.1 51596199 2953920 complement(2212145..2212798) 1 NC_006155.1 similar to Salmonella typhi STY4637 exonuclease (54.4% evalue=3.E-45); C. muridarum TC0532 DNA polymerase III, epsilon subunit, (30.8% evalue=4.E-10); Orf81 bacteriophage 186 2212798 2953920 YPTB1864 Yersinia pseudotuberculosis IP 32953 Orf81 bacteriophage 186 YP_070390.1 2212145 R 273123 CDS YP_070391.1 51596200 2953921 complement(2212855..2213622) 1 NC_006155.1 hypothetical protein 2213622 2953921 YPTB1865 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070391.1 2212855 R 273123 CDS YP_070392.1 51596201 2953922 complement(2213705..2214013) 1 NC_006155.1 hypothetical protein 2214013 2953922 YPTB1866 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070392.1 2213705 R 273123 CDS YP_070393.1 51596202 2953923 complement(2214041..2214301) 1 NC_006155.1 hypothetical protein 2214301 2953923 YPTB1867 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070393.1 2214041 R 273123 CDS YP_070394.1 51596203 2953924 complement(2214443..2214757) 1 NC_006155.1 hypothetical protein 2214757 2953924 YPTB1868 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070394.1 2214443 R 273123 CDS YP_070395.1 51596204 2953925 complement(2214972..2215175) 1 NC_006155.1 similar to Escherichia coli ECs2622 DNA-binding protein (64.1% evalue=7.E-17); Escherichia coli Z2970 coxT; regulator for prophage CP-933T (64.1% evalue=7.E-17); DNA-binding protein 2215175 2953925 YPTB1869 Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_070395.1 2214972 R 273123 CDS YP_070396.1 51596205 2953926 2215440..2215808 1 NC_006155.1 similar to Escherichia coli ECs2620 transcriptional regulator (41.5% evalue=1.E-12); Escherichia coli Z2969 unknown protein encoded by prophage CP-933T (41.5% evalue=1.E-12); prophage transcriptional regulator 2215808 2953926 YPTB1870 Yersinia pseudotuberculosis IP 32953 prophage transcriptional regulator YP_070396.1 2215440 D 273123 CDS YP_070397.1 51596206 2956877 2215829..2217526 1 NC_006155.1 similar to Saccharomyces cerevisiae YDL058W USO1, INT1; intracellular protein transport protein (21.3% evalue=1.E-11); A. thalianan At3g28770 T19N8.6; hypothetical protein (19.6% evalue=1.E-08); hypothetical protein 2217526 USO1 2956877 USO1 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070397.1 2215829 D 273123 CDS YP_070398.1 51596207 2953927 2217547..2217966 1 NC_006155.1 similar to Escherichia coli ECs2617 integrase (58.5% evalue=3.E-34); Escherichia coli Z2966 intT; integrase for prophage CP-933T (58.5% evalue=3.E-34); bacteriophage integrase 2217966 2953927 YPTB1872 Yersinia pseudotuberculosis IP 32953 bacteriophage integrase YP_070398.1 2217547 D 273123 CDS YP_070399.1 51596208 2953928 2218035..2218415 1 NC_006155.1 hypothetical protein 2218415 2953928 YPTB1873 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070399.1 2218035 D 273123 CDS YP_070400.1 51596209 2953929 2218415..2218747 1 NC_006155.1 similar to Escherichia coli ECs2617 integrase (63.8% evalue=2.E-34); Escherichia coli Z2966 intT; integrase for prophage CP-933T (63.8% evalue=2.E-34); bacteriophage integrase 2218747 2953929 YPTB1874 Yersinia pseudotuberculosis IP 32953 bacteriophage integrase YP_070400.1 2218415 D 273123 CDS YP_070401.1 51596210 2953930 2219041..2219418 1 NC_006155.1 similar to Escherichia coli ECs2617 integrase (72.5% evalue=2.E-46); Escherichia coli Z2966 intT; integrase for prophage CP-933T (72.5% evalue=2.E-46); prophage integrase 2219418 2953930 YPTB1875 Yersinia pseudotuberculosis IP 32953 prophage integrase YP_070401.1 2219041 D 273123 CDS YP_070402.1 51596211 2953933 2221109..2221255 1 NC_006155.1 similar to Yersinia pestis YPO1870 hypothetical protein, 100% identical; hypothetical protein 2221255 2953933 YPTB1879 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070402.1 2221109 D 273123 CDS YP_070403.1 51596212 2953934 complement(2222076..2222318) 1 NC_006155.1 similar to Yersinia pestis YPO1871 hypothetical protein (64.5% evalue=8.E-20); M. musculus 14659 Glrp1, GRP-1; glutamine repeat protein 1 (64.1% evalue=3.E-10); hypothetical protein 2222318 2953934 YPTB1880 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070403.1 2222076 R 273123 CDS YP_070404.1 51596213 2953935 complement(2222344..2222688) 1 NC_006155.1 similar to Yersinia pestis YPO1872 hypothetical protein, 99% identical; hypothetical protein 2222688 2953935 YPTB1881 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070404.1 2222344 R 273123 CDS YP_070405.1 51596214 2956716 complement(2222908..2223867) 1 NC_006155.1 similar to Yersinia pestis YPO1873 tnpA; transposase (98.1% evalue=0); Mycobacterium tuberculosis_CDC1551MT3534 IS1540, transposase (38.5% evalue=1.E-46); transposase 2223867 tnpA 2956716 tnpA Yersinia pseudotuberculosis IP 32953 transposase YP_070405.1 2222908 R 273123 CDS YP_070406.1 51596215 2953936 complement(2223939..2224358) 1 NC_006155.1 similar to Yersinia pestis YPO1874 conserved hypothetical protein (100% evalue=3.E-74); hypothetical protein 2224358 2953936 YPTB1883 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070406.1 2223939 R 273123 CDS YP_070407.1 51596216 2953937 2225288..2226646 1 NC_006155.1 similar to Bacillus subtilis BG11115 yxaM, s14MR; similar to antibiotic resistance protein (26.6% evalue=4.E-18); B. burgdorferiBBI26 multidrug-efflux transporter (23.8% evalue=1.E-18); MFS superfamliy multidrug-efflux transporter 2226646 2953937 YPTB1884 Yersinia pseudotuberculosis IP 32953 MFS superfamliy multidrug-efflux transporter YP_070407.1 2225288 D 273123 CDS YP_070408.1 51596217 2953938 2226643..2228376 1 NC_006155.1 similar to Lactococcus lactis L130150 yjdA; hypothetical protein (27.3% evalue=3.E-16); Agrobacterium tumefaciens AGR_C_1920 biotin synthesis protein BioC (32.9% evalue=1.E-14); thiazole biosynthesis adenylyltransferase ThiF 2228376 2953938 YPTB1885 Yersinia pseudotuberculosis IP 32953 thiazole biosynthesis adenylyltransferase ThiF YP_070408.1 2226643 D 273123 CDS YP_070409.1 51596218 2953939 2228366..2229091 1 NC_006155.1 similar to Helicobacter pylori_J99jhp0993 (34.4% evalue=5.E-27); C. jejuni Cj0590 hypothetical protein Cj0590 (32.6% evalue=1.E-31); hypothetical protein 2229091 2953939 YPTB1886 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070409.1 2228366 D 273123 CDS YP_070410.1 51596219 2953940 2229079..2229933 1 NC_006155.1 hypothetical protein 2229933 2953940 YPTB1887 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070410.1 2229079 D 273123 CDS YP_070411.1 51596220 2953941 2229918..2230730 1 NC_006155.1 similar to Pasteurella multocida PM1158 hypothetical HI0095 (28.2% evalue=4.E-13); B. halodurans BH0821 unknown conserved protein (30.3% evalue=2.E-10); hypothetical protein 2230730 2953941 YPTB1888 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070411.1 2229918 D 273123 CDS YP_070412.1 51596221 2955975 2230727..2231893 1 NC_006155.1 similar to Methanothermobacter thermautotrophicus MTH1335 diaminopimelate decarboxylase (25.5% evalue=2.E-24); A. fulgidus AF0800 lysA; diaminopimelate decarboxylase (28% evalue=2.E-24); diaminopimelate decarboxylase 2231893 lysA 2955975 lysA Yersinia pseudotuberculosis IP 32953 diaminopimelate decarboxylase YP_070412.1 2230727 D 273123 CDS YP_070413.1 51596222 2957084 2231868..2232425 1 NC_006155.1 similar to Bacillus subtilis BG13164 yjcK; similar to ribosomal-protein-alanine N-acetyltransferase (33.3% evalue=2.E-11); Brucella melitensis BMEI1452 ribosomal-protein-alanine acetyltransferase (30.2% evalue=7.E-10); ribosomal-protein-alanine acetyltransferase 2232425 yjcK 2957084 yjcK Yersinia pseudotuberculosis IP 32953 ribosomal-protein-alanine acetyltransferase YP_070413.1 2231868 D 273123 CDS YP_070414.1 51596223 2953942 complement(2232455..2232757) 1 NC_006155.1 similar to Yersinia pestis YPCD1.63 transposase (90.9% evalue=5.E-16); Vibrio cholerae VC0817 transposase, (77.5% evalue=2.E-21); hypothetical protein 2232757 2953942 YPTB1891 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070414.1 2232455 R 273123 CDS YP_070415.1 51596224 2956717 complement(2233095..2234054) 1 NC_006155.1 similar to Yersinia pestis YPO1873 tnpA; transposase (99% evalue=0); Mycobacterium tuberculosis_CDC1551MT3534 IS1540, transposase (38.8% evalue=1.E-47); transposase 2234054 tnpA 2956717 tnpA Yersinia pseudotuberculosis IP 32953 transposase YP_070415.1 2233095 R 273123 CDS YP_070416.1 51596225 2953945 complement(2234943..2235197) 1 NC_006155.1 similar to Yersinia pestis YPO1876 hypothetical protein, 96% identical; hypothetical protein 2235197 2953945 YPTB1895 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070416.1 2234943 R 273123 CDS YP_070417.1 51596226 2953946 complement(2235202..2235507) 1 NC_006155.1 similar to Yersinia pestis YPO1877 hypothetical protein (99% evalue=5.E-57); Ralstonia solanacearum RS00212 hypothetical protein (52.5% evalue=2.E-17); hypothetical protein 2235507 2953946 YPTB1896 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070417.1 2235202 R 273123 CDS YP_070418.1 51596227 2953947 complement(2235504..2235719) 1 NC_006155.1 similar to Yersinia pestis YPO1878 hypothetical protein, 100% identical; hypothetical protein 2235719 2953947 YPTB1897 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070418.1 2235504 R 273123 CDS YP_070419.1 51596228 2953948 complement(2236154..2236441) 1 NC_006155.1 similar to Yersinia pestis YPO1879 hypothetical protein (98.9% evalue=3.E-52); hypothetical protein 2236441 2953948 YPTB1898 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070419.1 2236154 R 273123 CDS YP_070420.1 51596229 2953949 complement(2236458..2236757) 1 NC_006155.1 similar to Yersinia pestis YPO1880 phage-related protein (100% evalue=1.E-52); Salmonella typhi STY3688 phage baseplate assembly protein (71% evalue=2.E-26); hypothetical protein 2236757 2953949 YPTB1899 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070420.1 2236458 R 273123 CDS YP_070421.1 51596230 2953950 complement(2236754..2237113) 1 NC_006155.1 similar to Yersinia pestis YPO1881 phage-related protein (98.3% evalue=5.E-63); Salmonella typhi STY3687 phage baseplate assembly protein (54.1% evalue=2.E-18); hypothetical protein 2237113 2953950 YPTB1900 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070421.1 2236754 R 273123 CDS YP_070422.1 51596231 2953951 2237144..2237416 1 NC_006155.1 similar to Xylella fastidiosa XF1562 conserved hypothetical protein (52.9% evalue=5.E-17); Neisseria meningitidis NMB1118 conserved hypothetical protein (48.2% evalue=7.E-16); hypothetical protein 2237416 2953951 YPTB1901 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070422.1 2237144 D 273123 CDS YP_070423.1 51596232 2953952 2237424..2237687 1 NC_006155.1 similar to Yersinia pestis YPO1882 conserved hypothetical protein (100% evalue=1.E-46); Sinorhizobium meliloti SMc04432 hypothetical protein (46.8% evalue=2.E-12); hypothetical protein 2237687 2953952 YPTB1902 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070423.1 2237424 D 273123 CDS YP_070424.1 51596233 2953955 2239737..2240075 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (91.9% evalue=2.E-57); transposase (IS285) 2240075 2953955 YPTB1905 Yersinia pseudotuberculosis IP 32953 transposase (IS285) YP_070424.1 2239737 D 273123 CDS YP_070425.1 51596234 2953956 complement(2240493..2241062) 1 NC_006155.1 similar to Yersinia pestis YPO1886 exported protein (100% evalue=1.E-103); hypothetical protein 2241062 2953956 YPTB1906 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070425.1 2240493 R 273123 CDS YP_070426.1 51596235 2953957 complement(2241074..2241508) 1 NC_006155.1 similar to Yersinia pestis YPO1887 hypothetical protein (98.6% evalue=5.E-77); hypothetical protein 2241508 2953957 YPTB1907 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070426.1 2241074 R 273123 CDS YP_070427.1 51596236 2953960 2242477..2243274 1 NC_006155.1 similar to Yersinia pestis YPO1890 GntR-family transcriptional regulatory protein (100% evalue=1.E-151); Caulobacter crescentus CC0445 transcriptional regulator, GntR family (41.2% evalue=2.E-48); GntR family transcriptional regulator 2243274 2953960 YPTB1910 Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_070427.1 2242477 D 273123 CDS YP_070428.1 51596237 2953961 complement(2243244..2243534) 1 NC_006155.1 similar to Yersinia pestis YPO1891 hypothetical protein, 100% identical.; hypothetical protein 2243534 2953961 YPTB1911 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070428.1 2243244 R 273123 CDS YP_070429.1 51596238 2953962 2243942..2244955 1 NC_006155.1 similar to Yersinia pestis YPO1892 oxidoreductase (99.7% evalue=0); Listeria monocytogenes lmo2800 similar to dehydrogenase (37.4% evalue=3.E-60); oxidoreductase 2244955 2953962 YPTB1912 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_070429.1 2243942 D 273123 CDS YP_070430.1 51596239 2953963 2244985..2246253 1 NC_006155.1 similar to Yersinia pestis YPO1893 exported solute-binding protein (99.5% evalue=0); Agrobacterium tumefaciens AGR_L_841 smoE; periplasmic sorbitol-binding protein (30.9% evalue=2.E-43); sorbitol ABC transporter substrate-binding protein 2246253 2953963 YPTB1913 Yersinia pseudotuberculosis IP 32953 sorbitol ABC transporter substrate-binding protein YP_070430.1 2244985 D 273123 CDS YP_070431.1 51596240 2953964 2246320..2247180 1 NC_006155.1 similar to Yersinia pestis YPO1894 binding-protein-dependent transport system, inner membrane component (100% evalue=1.E-160); Agrobacterium tumefaciens Atu2506 ABC transporter, membrane spanning protein [sugar] (40.6% evalue=1.E-59); sugar (sorbitol/trehalose/maltose) ABC transporter permease 2247180 2953964 YPTB1914 Yersinia pseudotuberculosis IP 32953 sugar (sorbitol/trehalose/maltose) ABC transporter permease YP_070431.1 2246320 D 273123 CDS YP_070432.1 51596241 2953965 2247173..2248000 1 NC_006155.1 similar to Yersinia pestis YPO1895 binding-protein-dependent transport system, inner membrane component (100% evalue=1.E-154); Pseudomonas aeruginosa PA2340 multiple sugar transport system permease (40.6% evalue=1.E-51); sugar (sorbitol/trehalose/maltose) ABC transporter permease 2248000 2953965 YPTB1915 Yersinia pseudotuberculosis IP 32953 sugar (sorbitol/trehalose/maltose) ABC transporter permease YP_070432.1 2247173 D 273123 CDS YP_070433.1 51596242 2953966 2248025..2249167 1 NC_006155.1 similar to Yersinia pestis YPO1896 binding-protein-dependent transport system, ATP-binding component (99.6% evalue=1.E-153); Vibrio cholerae VCA0946 maltose transport system ATP-binding protein (52.3% evalue=1.E-102); sugar ABC transporter ATP-binding protein 2249167 2953966 YPTB1916 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_070433.1 2248025 D 273123 CDS YP_070434.1 51596243 2953967 complement(2249850..2250590) 1 NC_006155.1 similar to Yersinia pestis YPO1918 probable pili assembly chaperone (100% evalue=1.E-139); Escherichia coli Z1534 chaperone (44.6% evalue=6.E-46); pili assembly chaperone 2250590 2953967 YPTB1917 Yersinia pseudotuberculosis IP 32953 pili assembly chaperone YP_070434.1 2249850 R 273123 CDS YP_070435.1 51596244 2953968 complement(2250587..2251936) 1 NC_006155.1 similar to Yersinia pestis YPO1919 exported protein (100% evalue=0); Escherichia coli Z1535 hypothetical protein (34.5% evalue=1.E-59); hypothetical protein 2251936 2953968 YPTB1918 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070435.1 2250587 R 273123 CDS YP_070436.1 51596245 2953969 complement(2251952..2254543) 1 NC_006155.1 similar to Yersinia pestis YPO1920 probable fimbrial usher protein (99.7% evalue=0); Escherichia coli Z1536 usher protein (44.6% evalue=0); outer membrane fimbrial usher porin 2254543 2953969 YPTB1919 Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_070436.1 2251952 R 273123 CDS YP_070437.1 51596246 2953970 complement(2254592..2255323) 1 NC_006155.1 similar to Yersinia pestis YPO1921 probable pili assembly chaperone (88% evalue=1.E-112); Escherichia coli Z1537 chaperone (41.3% evalue=3.E-47); pili assembly chaperone 2255323 2953970 YPTB1920 Yersinia pseudotuberculosis IP 32953 pili assembly chaperone YP_070437.1 2254592 R 273123 CDS YP_070438.1 51596247 2953971 complement(2255416..2255946) 1 NC_006155.1 similar to Yersinia pestis YPO1922 fimbrial protein (100% evalue=7.E-94); Salmonella typhimurium STM0340 stbA; fimbriae; major subunit (46.3% evalue=8.E-34); fimbrial protein 2255946 2953971 YPTB1921 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_070438.1 2255416 R 273123 CDS YP_070439.1 51596248 2953972 complement(2256327..2260355) 1 NC_006155.1 similar to Pseudomonas aeruginosa PA3946 probable two-component sensor (27.6% evalue=1.E-120); Pseudomonas aeruginosa PA3044 probable two-component sensor (36.5% evalue=1.E-89); two-component sensor 2260355 2953972 YPTB1922 Yersinia pseudotuberculosis IP 32953 two-component sensor YP_070439.1 2256327 R 273123 CDS YP_070440.1 51596249 2953973 complement(2260330..2260962) 1 NC_006155.1 similar to Yersinia pestis YPO1925 two-component response regulator (100% evalue=1.E-112); Salmonella typhimurium STM0549 fimZ; fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) (47.3% evalue=5.E-50); two-component response regulator 2260962 2953973 YPTB1923 Yersinia pseudotuberculosis IP 32953 two-component response regulator YP_070440.1 2260330 R 273123 CDS YP_070441.1 51596250 2953974 complement(2261789..2263111) 1 NC_006155.1 similar to Yersinia pestis YPO1926 4-hydroxybutyrate coenzyme A transferase (99.5% evalue=0); Salmonella typhimurium STM3118 acetyl-CoA hydrolase (76.1% evalue=0); 4-hydroxybutyrate CoA-transferase 2263111 2953974 YPTB1924 Yersinia pseudotuberculosis IP 32953 4-hydroxybutyrate CoA-transferase YP_070441.1 2261789 R 273123 CDS YP_070442.1 51596251 2953975 complement(2263134..2263676) 1 NC_006155.1 similar to Yersinia pestis YPO1927 transcription regulatory protein (100% evalue=1.E-101); Salmonella typhimurium STM3119 monoamine oxidase (87.4% evalue=3.E-83); transcription regulatory protein 2263676 2953975 YPTB1925 Yersinia pseudotuberculosis IP 32953 transcription regulatory protein YP_070442.1 2263134 R 273123 CDS YP_070443.1 51596252 2953976 complement(2263726..2264568) 1 NC_006155.1 similar to Yersinia pestis YPO1928 citrate lyase beta chain (100% evalue=1.E-152); Salmonella typhimurium STM3120 transcriptional regulator, LysR family (72.3% evalue=1.E-109); citrate lyase subunit beta 2264568 2953976 YPTB1926 Yersinia pseudotuberculosis IP 32953 citrate lyase subunit beta YP_070443.1 2263726 R 273123 CDS YP_070444.1 51596253 2953977 2264657..2265541 1 NC_006155.1 similar to Yersinia pestis YPO1929 probable LysR-family transcriptional regulator (99.6% evalue=1.E-159); Salmonella typhimurium STM3121 transcriptional regulator, LysR family (78.6% evalue=1.E-123); LysR family transcriptional regulator 2265541 2953977 YPTB1927 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_070444.1 2264657 D 273123 CDS YP_070445.1 51596254 2953978 complement(2265616..2266089) 1 NC_006155.1 similar to Yersinia pestis YPO1930 lipoprotein (98.7% evalue=1.E-89); lipoprotein 2266089 2953978 YPTB1928 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070445.1 2265616 R 273123 CDS YP_070446.1 51596255 2953979 complement(2266114..2266674) 1 NC_006155.1 similar to Yersinia pestis YPO1931 hypothetical protein (98.9% evalue=1.E-104); hypothetical protein 2266674 2953979 YPTB1929 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070446.1 2266114 R 273123 CDS YP_070447.1 51596256 2953980 complement(2266894..2268123) 1 NC_006155.1 similar to Yersinia pestis YPO1932 sugar transporter (100% evalue=0); Pseudomonas aeruginosa PA2114 probable MFS transporter (55.7% evalue=1.E-131); MFS aromatic acid symporter 2268123 2953980 YPTB1930 Yersinia pseudotuberculosis IP 32953 MFS aromatic acid symporter YP_070447.1 2266894 R 273123 CDS YP_070448.1 51596257 2953981 complement(2268189..2269058) 1 NC_006155.1 similar to Yersinia pestis YPO1933 dicarboxylic acid hydrolase (99.6% evalue=1.E-171); Ralstonia solanacearum RS05190 probable hydrolase transmembrane protein (33.5% evalue=3.E-36); dicarboxylic acid hydrolase 2269058 2953981 YPTB1931 Yersinia pseudotuberculosis IP 32953 dicarboxylic acid hydrolase YP_070448.1 2268189 R 273123 CDS YP_070449.1 51596258 2953982 2269170..2270132 1 NC_006155.1 similar to Yersinia pestis YPO1934 LysR-family transcriptional regulatory protein (100% evalue=0); Sinorhizobium meliloti SMa0498 LysR-type regulator (26.4% evalue=7.E-20); LysR family transcriptional regulator 2270132 2953982 YPTB1932 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_070449.1 2269170 D 273123 CDS YP_070450.1 51596259 2953983 complement(2270437..2271036) 1 NC_006155.1 Part of the NQR complex which has six subunits NqrA, NqrB, NqrC, NqrD, NqrE and NqrF. NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Na(+)-translocating NADH-quinone reductase subunit E 2271036 2953983 YPTB1933 Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit E YP_070450.1 2270437 R 273123 CDS YP_070451.1 51596260 2953984 2271388..2272548 1 NC_006155.1 similar to Yersinia pestis YPO1936 aminotransferase (100% evalue=0); Pseudomonas aeruginosa PA1654 probable aminotransferase (49.8% evalue=1.E-100); aminotransferase 2272548 2953984 YPTB1934 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_070451.1 2271388 D 273123 CDS YP_070452.1 51596261 2955197 complement(2272744..2274273) 1 NC_006155.1 similar to Yersinia pestis YPO1937 ansP; L-asparagine permease (100% evalue=0); Salmonella typhimurium STM1584 ansP; APC family, L-asparagine transport protein (79.5% evalue=0); APC family L-asparagine permease 2274273 ansP 2955197 ansP Yersinia pseudotuberculosis IP 32953 APC family L-asparagine permease YP_070452.1 2272744 R 273123 CDS YP_070453.1 51596262 2953985 complement(2275038..2275808) 1 NC_006155.1 similar to Yersinia pestis YPO1938 probable deoR-family transcriptional regulatory protein (99.6% evalue=1.E-138); Escherichia coli JW2705 ygbI; Hypothetical transcriptional regulator (61.9% evalue=3.E-82); DeoR family transcriptional regulator 2275808 2953985 YPTB1936 Yersinia pseudotuberculosis IP 32953 DeoR family transcriptional regulator YP_070453.1 2275038 R 273123 CDS YP_070454.1 51596263 2953986 2277019..2278026 1 NC_006155.1 catalyzes the formation of glutamate from glutamine; glutaminase 2278026 2953986 YPTB1937 Yersinia pseudotuberculosis IP 32953 glutaminase YP_070454.1 2277019 D 273123 CDS YP_070455.1 51596264 2953987 2278137..2279777 1 NC_006155.1 similar to Yersinia pestis YPO1940 membrane protein (100% evalue=0); Sinorhizobium meliloti SMa0185 possible transmembrane-transport protein (25.5% evalue=3.E-28); MFS superfamily multidrug efflux transporter 2279777 2953987 YPTB1938 Yersinia pseudotuberculosis IP 32953 MFS superfamily multidrug efflux transporter YP_070455.1 2278137 D 273123 CDS YP_070456.1 51596265 2953988 2280377..2282296 1 NC_006155.1 similar to Yersinia pestis YPO1941 membrane protein (99.8% evalue=0); Pasteurella multocida PM0453 hypothetical Yersinia pestis (64.2% evalue=0); high-affinity Fe2+/Pb2+ permease 2282296 2953988 YPTB1939 Yersinia pseudotuberculosis IP 32953 high-affinity Fe2+/Pb2+ permease YP_070456.1 2280377 D 273123 CDS YP_070457.1 51596266 2953989 2282500..2283027 1 NC_006155.1 similar to Yersinia pestis YPO1942 exported protein (100% evalue=1.E-100); Pasteurella multocida PM0452 hypothetical Yersinia pestis (81.5% evalue=1.E-84); hypothetical protein 2283027 2953989 YPTB1940 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070457.1 2282500 D 273123 CDS YP_070458.1 51596267 2953990 2283328..2284737 1 NC_006155.1 similar to Yersinia pestis YPO1943 membrane protein (100% evalue=0); Pasteurella multocida PM0451 hypothetical Yersinia pestis (49.2% evalue=1.E-122); hypothetical protein 2284737 2953990 YPTB1941 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070458.1 2283328 D 273123 CDS YP_070459.1 51596268 2953991 2284740..2286032 1 NC_006155.1 similar to Yersinia pestis YPO1944 membrane protein (100% evalue=0); Pasteurella multocida PM0450 hypothetical ABC transporter (67.5% evalue=1.E-162); ABC transporter permease 2286032 2953991 YPTB1942 Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_070459.1 2284740 D 273123 CDS YP_070460.1 51596269 2953992 2286022..2287203 1 NC_006155.1 similar to Yersinia pestis YPO1945 membrane protein (98.4% evalue=0); Pasteurella multocida PM0449 hypothetical Yersinia pestis (67.3% evalue=1.E-139); ABC transporter permease 2287203 2953992 YPTB1943 Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_070460.1 2286022 D 273123 CDS YP_070461.1 51596270 2953993 2287207..2287920 1 NC_006155.1 similar to Yersinia pestis YPO1946 ABC transporter, ATP-binding protein (99.5% evalue=1.E-132); Pasteurella multocida PM0448 hypothetical Yersinia pestis (77.6% evalue=3.E-94); ABC transporter ATP-binding protein 2287920 2953993 YPTB1944 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_070461.1 2287207 D 273123 CDS YP_070462.1 51596271 2953994 2287877..2288407 1 NC_006155.1 similar to Yersinia pestis YPO1947 thioredoxin (100% evalue=3.E-91); Pasteurella multocida PM0447 resA; cytochrome c biogenesis protein, (38.7% evalue=3.E-30); thioredoxin 2288407 2953994 YPTB1945 Yersinia pseudotuberculosis IP 32953 thioredoxin YP_070462.1 2287877 D 273123 CDS YP_070463.1 51596272 2953995 2288404..2288718 1 NC_006155.1 similar to Yersinia pestis YPO1948 cytochrome (100% evalue=8.E-54); Pasteurella multocida PM0446 cytochrome c-553 homolog (40.2% evalue=5.E-14); cytochrome 2288718 2953995 YPTB1946 Yersinia pseudotuberculosis IP 32953 cytochrome YP_070463.1 2288404 D 273123 CDS YP_070464.1 51596273 2956675 2288891..2289778 1 NC_006155.1 with TehA confers resistance to tellurite; tellurite resistance protein TehB 2289778 tehB 2956675 tehB Yersinia pseudotuberculosis IP 32953 tellurite resistance protein TehB YP_070464.1 2288891 D 273123 CDS YP_070465.1 51596274 2953996 2289919..2291136 1 NC_006155.1 similar to Yersinia pestis YPO1950 peptidase (99.5% evalue=0); Agrobacterium tumefaciens AGR_L_3328 hypothetical protein (32.7% evalue=3.E-45); endopeptidase 2291136 2953996 YPTB1948 Yersinia pseudotuberculosis IP 32953 endopeptidase YP_070465.1 2289919 D 273123 CDS YP_070466.1 51596275 2955806 2291805..2294273 1 NC_006155.1 in Yersinia this protein is important for biofilm formation and hemin adsorption; hypothetical protein 2294273 hmsH 2955806 hmsH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070466.1 2291805 D 273123 CDS YP_070467.1 51596276 2955805 2294286..2296307 1 NC_006155.1 in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; outer membrane N-deacetylase 2296307 hmsF 2955805 hmsF Yersinia pseudotuberculosis IP 32953 outer membrane N-deacetylase YP_070467.1 2294286 D 273123 CDS YP_070468.2 161760579 2955807 2296297..2297631 1 NC_006155.1 predicted polysaccharide polymerase involved in biofilm formation; in Escherichia coli the related protein PgaC is required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 2297631 hmsR 2955807 hmsR Yersinia pseudotuberculosis IP 32953 N-glycosyltransferase YP_070468.2 2296297 D 273123 CDS YP_070469.1 51596278 2955808 2297628..2298095 1 NC_006155.1 in Yersinia this gene is involved in biofilm formation and hemin adsorption; hemin storage system protein 2298095 hmsS 2955808 hmsS Yersinia pseudotuberculosis IP 32953 hemin storage system protein YP_070469.1 2297628 D 273123 CDS YP_070470.1 51596279 2953997 2298444..2299343 1 NC_006155.1 similar to Yersinia pestis YPO1955 acetyltransferase (99.6% evalue=0); Brucella melitensis BMEII0002 ribosomal-protein-serine acetyltransferase (44% evalue=5.E-52); acetyltransferase 2299343 2953997 YPTB1953 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_070470.1 2298444 D 273123 CDS YP_070471.1 51596280 2953998 2299782..2300060 1 NC_006155.1 similar to Yersinia pestis YPO1956 hypothetical protein (100% evalue=4.E-48); hypothetical protein 2300060 2953998 YPTB1954 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070471.1 2299782 D 273123 CDS YP_070472.1 51596281 2956267 2300120..2300908 1 NC_006155.1 similar to Yersinia pestis YPO1957 phoH, psiH; phosphate starvation-inducible protein (100% evalue=1.E-144); Salmonella typhimurium STM1126 phoH; PhoB-dependent, ATP-binding pho regulon component (89.6% evalue=1.E-133); hypothetical protein 2300908 phoH 2956267 phoH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070472.1 2300120 D 273123 CDS YP_070473.1 51596282 2955322 complement(2301011..2302111) 1 NC_006155.1 similar to Yersinia pestis YPO1958 chaA; calcium/proton antiporter (100% evalue=0); Salmonella typhimurium STM1771 chaA; CaCA family, sodium-calcium/proton antiporter (79.7% evalue=1.E-155); calcium/sodium:proton antiporter 2302111 chaA 2955322 chaA Yersinia pseudotuberculosis IP 32953 calcium/sodium:proton antiporter YP_070473.1 2301011 R 273123 CDS YP_070474.1 51596283 2956132 complement(2302678..2304459) 1 NC_006155.1 similar to Yersinia pestis YPO1959 narX, narR; nitrate/nitrite sensor protein (99.8% evalue=0); Escherichia coli ECs1727 nitrate/nitrite sensor protein NarX (47.8% evalue=1.E-150); nitrate/nitrite sensor protein NarX 2304459 narX 2956132 narX Yersinia pseudotuberculosis IP 32953 nitrate/nitrite sensor protein NarX YP_070474.1 2302678 R 273123 CDS YP_070475.1 51596284 2953999 2304769..2306190 1 NC_006155.1 similar to Yersinia pestis YPO1960 GntR-family regulatory protein (100% evalue=0); Escherichia coli JW1434 yjiR; Hypothetical protein (56.7% evalue=1.E-155); GntR family transcriptional regulator 2306190 2953999 YPTB1958 Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_070475.1 2304769 D 273123 CDS YP_070476.1 51596285 2955253 2306851..2308095 1 NC_006155.1 catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase 2308095 argD 2955253 argD Yersinia pseudotuberculosis IP 32953 bifunctional succinylornithine transaminase/acetylornithine transaminase YP_070476.1 2306851 D 273123 CDS YP_070477.1 51596286 2955251 2308125..2309177 1 NC_006155.1 similar to Yersinia pestis YPO1963 astA; arginine N-succinyltransferase (99.7% evalue=0); Escherichia coli ECs2453 arginine N-succinyltransferase (63.4% evalue=1.E-121); arginine succinyltransferase 2309177 astA 2955251 astA Yersinia pseudotuberculosis IP 32953 arginine succinyltransferase YP_070477.1 2308125 D 273123 CDS YP_070478.1 51596287 2955254 2309174..2310691 1 NC_006155.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 2310691 astD 2955254 astD Yersinia pseudotuberculosis IP 32953 succinylglutamic semialdehyde dehydrogenase YP_070478.1 2309174 D 273123 CDS YP_070479.1 51596288 2955252 2310715..2312058 1 NC_006155.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2312058 astB 2955252 astB Yersinia pseudotuberculosis IP 32953 succinylarginine dihydrolase YP_070479.1 2310715 D 273123 CDS YP_070480.1 51596289 2955255 2312116..2313111 1 NC_006155.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2313111 astE 2955255 astE Yersinia pseudotuberculosis IP 32953 succinylglutamate desuccinylase YP_070480.1 2312116 D 273123 CDS YP_070481.1 51596290 2956189 2313838..2314920 1 NC_006155.1 similar to Yersinia pestis YPO1411 outer membrane porin C protein (59.8% evalue=1.E-116); outer membrane protein OmpC 2314920 ompC2 2956189 ompC2 Yersinia pseudotuberculosis IP 32953 outer membrane protein OmpC YP_070481.1 2313838 D 273123 CDS YP_070482.1 51596291 2955852 complement(2315515..2316321) 1 NC_006155.1 similar to Yersinia pestis YPO1971 hutG; N-formylglutamate amidohydrolase (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA5091 hutG; N-formylglutamate amidohydrolase (60.2% evalue=4.E-91); N-formylglutamate amidohydrolase 2316321 hutG 2955852 hutG Yersinia pseudotuberculosis IP 32953 N-formylglutamate amidohydrolase YP_070482.1 2315515 R 273123 CDS YP_070483.1 51596292 2955854 complement(2316318..2317538) 1 NC_006155.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 2317538 hutI 2955854 hutI Yersinia pseudotuberculosis IP 32953 imidazolonepropionase YP_070483.1 2316318 R 273123 CDS YP_070484.1 51596293 2955851 complement(2317742..2318509) 1 NC_006155.1 similar to Yersinia pestis YPO1973 hutC; GntR-family transcriptional regulatory protein (99.2% evalue=1.E-143); Pseudomonas aeruginosa PA5105 hutC; histidine utilization repressor HutC (64% evalue=2.E-87); GntR family transcriptional regulator 2318509 hutC 2955851 hutC Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_070484.1 2317742 R 273123 CDS YP_070485.1 51596294 2954000 2318657..2320027 1 NC_006155.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2320027 2954000 YPTB1968 Yersinia pseudotuberculosis IP 32953 N-formimino-L-glutamate deiminase YP_070485.1 2318657 D 273123 CDS YP_070486.1 51596295 2954001 2320027..2320599 1 NC_006155.1 similar to Yersinia pestis YPO1975 conserved hypothetical protein (98.9% evalue=1.E-110); Escherichia coli Z2774 hypothetical protein (37.4% evalue=1.E-23); hypothetical protein 2320599 2954001 YPTB1969 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070486.1 2320027 D 273123 CDS YP_070487.1 51596296 2954002 complement(2320777..2322774) 1 NC_006155.1 similar to Yersinia pestis YPO1976 hypothetical protein (98% evalue=0); hypothetical protein 2322774 2954002 YPTB1970 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070487.1 2320777 R 273123 CDS YP_070488.1 51596297 2954003 2323411..2324418 1 NC_006155.1 similar to Neisseria meningitidis NMB1916 3-oxoacyl-(acyl-carrier-protein) synthase III (30% evalue=8.E-38); Agrobacterium tumefaciens AGR_C_2178 3-oxoacyl-[acyl-carrier-protein] synthase III (31% evalue=1.E-37); 3-oxoacyl-ACP synthase 2324418 2954003 YPTB1971 Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP synthase YP_070488.1 2323411 D 273123 CDS YP_070489.1 51596298 2954004 2324432..2325448 1 NC_006155.1 similar to Yersinia pestis YPO1979 dehydrogenase (99.7% evalue=0); dehydrogenase 2325448 2954004 YPTB1972 Yersinia pseudotuberculosis IP 32953 dehydrogenase YP_070489.1 2324432 D 273123 CDS YP_070490.1 51596299 2954005 2325441..2326247 1 NC_006155.1 similar to Yersinia pestis YPO1980 conserved hypothetical protein (98.5% evalue=1.E-156); Xylella fastidiosa XF1361 conserved hypothetical protein (24.5% evalue=3.E-09); hypothetical protein 2326247 2954005 YPTB1973 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070490.1 2325441 D 273123 CDS YP_070491.1 51596300 2954006 2326244..2327530 1 NC_006155.1 similar to Yersinia pestis YPO1981 coenzyme synthetase (99% evalue=0); Vibrio cholerae VC0924 capK protein, (33.3% evalue=2.E-10); coenzyme synthetase 2327530 2954006 YPTB1974 Yersinia pseudotuberculosis IP 32953 coenzyme synthetase YP_070491.1 2326244 D 273123 CDS YP_070492.1 51596301 2954007 2327715..2328626 1 NC_006155.1 similar to Yersinia pestis YPO1982 dehydrogenase (99.3% evalue=1.E-172); Pseudomonas aeruginosa PA4361 probable oxidoreductase (29.3% evalue=5.E-25); dehydrogenase 2328626 2954007 YPTB1975 Yersinia pseudotuberculosis IP 32953 dehydrogenase YP_070492.1 2327715 D 273123 CDS YP_070493.1 51596302 2954008 2328626..2329780 1 NC_006155.1 similar to Yersinia pestis YPO1983 glycosyl transferase (99.7% evalue=0); H. sapiens 7357 UGCG, GCS; UDP-glucose ceramide glucosyltransferase (21.7% evalue=3.E-11); glycosyl transferase family protein 2329780 2954008 YPTB1976 Yersinia pseudotuberculosis IP 32953 glycosyl transferase family protein YP_070493.1 2328626 D 273123 CDS YP_070494.1 51596303 2954009 2329777..2330361 1 NC_006155.1 similar to Yersinia pestis YPO1984 hypothetical protein (100% evalue=1.E-110); hypothetical protein 2330361 2954009 YPTB1977 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070494.1 2329777 D 273123 CDS YP_070495.1 51596304 2954010 2330358..2331545 1 NC_006155.1 similar to Yersinia pestis YPO1985 glycosyl transferase (99.7% evalue=0); glycosyl transferase family protein 2331545 2954010 YPTB1978 Yersinia pseudotuberculosis IP 32953 glycosyl transferase family protein YP_070495.1 2330358 D 273123 CDS YP_070496.1 51596305 2954011 complement(2331706..2332170) 1 NC_006155.1 similar to Yersinia pestis YPO1986 exported protein (99.3% evalue=4.E-84); hypothetical protein 2332170 2954011 YPTB1979 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070496.1 2331706 R 273123 CDS YP_070497.1 51596306 2954012 complement(2332340..2334058) 1 NC_006155.1 similar to Yersinia pestis YPO1987 hypothetical protein (99.6% evalue=0); Salmonella typhimurium STM2008 periplasmic protein (46% evalue=1.E-150); hypothetical protein 2334058 2954012 YPTB1980 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070497.1 2332340 R 273123 CDS YP_070498.1 51596307 2954013 complement(2334122..2336284) 1 NC_006155.1 similar to Yersinia pestis YPO1989 exported protein (98.8% evalue=0); Salmonella typhimurium STM2007 TPR repeat protein (55.8% evalue=0); hypothetical protein 2336284 2954013 YPTB1981 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070498.1 2334122 R 273123 CDS YP_070499.1 51596308 2954014 2336862..2338973 1 NC_006155.1 similar to Yersinia pestis YPO1990 membrane protein (99.4% evalue=0); Salmonella typhimurium STM2135 inner membrane protein (36.4% evalue=1.E-127); hypothetical protein 2338973 2954014 YPTB1982 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070499.1 2336862 D 273123 CDS YP_070500.1 51596309 2954015 2339220..2339858 1 NC_006155.1 similar to Yersinia pestis YPO1991 sugar-phosphate isomerase (100% evalue=1.E-119); Salmonella typhimurium STM1933 ribose 5-phosphate isomerase (88.6% evalue=1.E-105); hypothetical protein 2339858 2954015 YPTB1983 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070500.1 2339220 D 273123 CDS YP_070501.1 51596310 2954016 complement(2339993..2340652) 1 NC_006155.1 similar to Yersinia pestis YPO1992 conserved hypothetical protein (100% evalue=1.E-128); Escherichia coli Z1925 unknown protein encoded by prophage CP-933X (60% evalue=1.E-73); hypothetical protein 2340652 2954016 YPTB1984 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070501.1 2339993 R 273123 CDS YP_070502.1 51596311 2954017 complement(2340757..2341437) 1 NC_006155.1 similar to Yersinia pestis YPO1993 dehydrogenase (99.5% evalue=1.E-125); Halobacterium VNG0115G yusZ1; oxidoreductase (32.1% evalue=6.E-24); dehydrogenase 2341437 2954017 YPTB1985 Yersinia pseudotuberculosis IP 32953 dehydrogenase YP_070502.1 2340757 R 273123 CDS YP_070503.1 51596312 2954018 complement(2341778..2342728) 1 NC_006155.1 similar to Yersinia pestis YPO1995 hypothetical protein (37.5% evalue=6.E-43); hypothetical protein 2342728 2954018 YPTB1986 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070503.1 2341778 R 273123 CDS YP_070504.1 51596313 2954019 complement(2342715..2343647) 1 NC_006155.1 similar to Yersinia pestis YPO1995 hypothetical protein (100% evalue=1.E-177); hypothetical protein 2343647 2954019 YPTB1987 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070504.1 2342715 R 273123 CDS YP_070505.1 51596314 2954020 complement(2343653..2344558) 1 NC_006155.1 similar to Yersinia pestis YPO1996 hypothetical protein (100% evalue=1.E-167); hypothetical protein 2344558 2954020 YPTB1988 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070505.1 2343653 R 273123 CDS YP_070506.1 51596315 2954021 complement(2345338..2346411) 1 NC_006155.1 similar to Yersinia pestis YPO1997 exported protein (99.4% evalue=0); hypothetical protein 2346411 2954021 YPTB1989 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070506.1 2345338 R 273123 CDS YP_070507.1 51596316 2954022 complement(2346624..2347094) 1 NC_006155.1 similar to Yersinia pestis YPO1998 exported protein (100% evalue=6.E-87); Sinorhizobium meliloti SMc01911 conserved hypothetical protein (57.7% evalue=1.E-40); hypothetical protein 2347094 2954022 YPTB1990 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070507.1 2346624 R 273123 CDS YP_070508.1 51596317 2954023 complement(2347149..2347571) 1 NC_006155.1 similar to Yersinia pestis YPO1999 decarboxylase (99.2% evalue=4.E-73); Ralstonia solanacearum RS03072 probable 4-carboxymuconolactone decarboxylase (54.6% evalue=2.E-25); decarboxylase 2347571 2954023 YPTB1991 Yersinia pseudotuberculosis IP 32953 decarboxylase YP_070508.1 2347149 R 273123 CDS YP_070509.1 51596318 2954024 complement(2347848..2349239) 1 NC_006155.1 similar to Yersinia pestis YPO2000 two-component system sensor protein (99.5% evalue=0); Pseudomonas aeruginosa PA1438 probable two-component sensor (42.3% evalue=2.E-91); two-component system sensor protein 2349239 2954024 YPTB1992 Yersinia pseudotuberculosis IP 32953 two-component system sensor protein YP_070509.1 2347848 R 273123 CDS YP_070510.1 51596319 2955349 complement(2349245..2349937) 1 NC_006155.1 similar to Yersinia pestis YPO2001 copR; transcriptional activator (99.5% evalue=1.E-124); Pseudomonas aeruginosa PA1437 probable two-component response regulator (66% evalue=3.E-76); transcriptional activator 2349937 copR 2955349 copR Yersinia pseudotuberculosis IP 32953 transcriptional activator YP_070510.1 2349245 R 273123 CDS YP_070511.1 51596320 2954025 2350202..2351293 1 NC_006155.1 similar to Yersinia pestis YPO2002 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs1909 hypothetical protein (36.9% evalue=8.E-50); hypothetical protein 2351293 2954025 YPTB1994 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070511.1 2350202 D 273123 CDS YP_070512.1 51596321 2954026 2351484..2352149 1 NC_006155.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 2352149 2954026 YPTB1995 Yersinia pseudotuberculosis IP 32953 flavodoxin YP_070512.1 2351484 D 273123 CDS YP_070513.1 51596322 2954027 2352164..2352859 1 NC_006155.1 similar to Yersinia pestis YPO2004 membrane protein (99.5% evalue=1.E-132); Pasteurella multocida PM1936 unknown (53.1% evalue=6.E-66); hypothetical protein 2352859 2954027 YPTB1996 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070513.1 2352164 D 273123 CDS YP_070514.1 51596323 2954028 complement(2353066..2353908) 1 NC_006155.1 similar to Yersinia pestis YPO2005 exported protein (98.9% evalue=1.E-166); hypothetical protein 2353908 2954028 YPTB1997 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070514.1 2353066 R 273123 CDS YP_070515.1 51596324 2956984 complement(2354015..2355106) 1 NC_006155.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2355106 ychF 2956984 ychF Yersinia pseudotuberculosis IP 32953 GTP-dependent nucleic acid-binding protein EngD YP_070515.1 2354015 R 273123 CDS YP_070516.1 51596325 2956357 complement(2355271..2355861) 1 NC_006155.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2355861 pth 2956357 pth Yersinia pseudotuberculosis IP 32953 peptidyl-tRNA hydrolase YP_070516.1 2355271 R 273123 CDS YP_070517.1 51596326 2954029 2356223..2356495 1 NC_006155.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2356495 2954029 YPTB2000 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070517.1 2356223 D 273123 CDS YP_070518.1 51596327 2956331 complement(2356697..2357644) 1 NC_006155.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2357644 prsA 2956331 prsA Yersinia pseudotuberculosis IP 32953 ribose-phosphate pyrophosphokinase YP_070518.1 2356697 R 273123 CDS YP_070519.1 51596328 2955894 complement(2357985..2358884) 1 NC_006155.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2358884 ipk 2955894 ipk Yersinia pseudotuberculosis IP 32953 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_070519.1 2357985 R 273123 CDS YP_070520.1 51596329 2954030 complement(2358886..2359509) 1 NC_006155.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; molecular chaperone LolB 2359509 lolB 2954030 lolB Yersinia pseudotuberculosis IP 32953 molecular chaperone LolB YP_070520.1 2358886 R 273123 CDS YP_070521.2 161760578 2955773 2359815..2361077 1 NC_006155.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2361077 hemA 2955773 hemA Yersinia pseudotuberculosis IP 32953 glutamyl-tRNA reductase YP_070521.2 2359815 D 273123 CDS YP_070522.1 51596331 2956316 2361110..2362192 1 NC_006155.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2362192 prfA 2956316 prfA Yersinia pseudotuberculosis IP 32953 peptide chain release factor 1 YP_070522.1 2361110 D 273123 CDS YP_070523.1 51596332 2954031 2362192..2363022 1 NC_006155.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2363022 2954031 YPTB2006 Yersinia pseudotuberculosis IP 32953 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_070523.1 2362192 D 273123 CDS YP_070524.1 51596333 2954032 2363086..2363487 1 NC_006155.1 similar to Yersinia pestis YPO2019 membrane protein (100% evalue=2.E-73); Salmonella typhimurium STM1774 sirC; Regulation of invasion genes (55.8% evalue=4.E-32); hypothetical protein 2363487 2954032 YPTB2007 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070524.1 2363086 D 273123 CDS YP_070525.1 51596334 2954033 2363484..2364293 1 NC_006155.1 similar to Yersinia pestis YPO2020 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM1773 ychA; transcriptional regulator (63.9% evalue=5.E-98); transcriptional regulator 2364293 2954033 YPTB2008 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070525.1 2363484 D 273123 CDS YP_070526.1 51596335 2955918 2364389..2365243 1 NC_006155.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2365243 kdsA 2955918 kdsA Yersinia pseudotuberculosis IP 32953 2-dehydro-3-deoxyphosphooctonate aldolase YP_070526.1 2364389 D 273123 CDS YP_070527.1 51596336 2956712 2365741..2366199 1 NC_006155.1 similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 2366199 tnp 2956712 tnp Yersinia pseudotuberculosis IP 32953 transposase for the IS1541 insertion element YP_070527.1 2365741 D 273123 CDS YP_070528.1 51596337 2956985 complement(2366323..2368020) 1 NC_006155.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM 2368020 ychM 2956985 ychM Yersinia pseudotuberculosis IP 32953 sulfate transporter YchM YP_070528.1 2366323 R 273123 CDS YP_070529.1 51596338 2954034 complement(2369079..2369954) 1 NC_006155.1 similar to Yersinia pestis YPO3232 exported protein (45.7% evalue=3.E-63); hypothetical protein 2369954 2954034 YPTB2012 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070529.1 2369079 R 273123 CDS YP_070530.1 51596339 2954035 complement(2370255..2371337) 1 NC_006155.1 similar to Yersinia pestis YPO2029 exported protein (99.7% evalue=0); Agrobacterium tumefaciens Atu4568 ABC transporter, substrate binding protein (23% evalue=2.E-13); ABC transporter substrate-binding protein 2371337 2954035 YPTB2013 Yersinia pseudotuberculosis IP 32953 ABC transporter substrate-binding protein YP_070530.1 2370255 R 273123 CDS YP_070531.1 51596340 2954036 complement(2371357..2372193) 1 NC_006155.1 similar to Yersinia pestis YPO2030 binding-protein-dependent transport system membrane protein (99.2% evalue=1.E-154); Agrobacterium tumefaciens Atu4571 ABC transporter, membrane spanning protein (34.9% evalue=5.E-39); ABC transporter permease 2372193 2954036 YPTB2014 Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_070531.1 2371357 R 273123 CDS YP_070532.1 51596341 2954037 complement(2372190..2373056) 1 NC_006155.1 similar to Yersinia pestis YPO2031 binding-protein-dependent transport system membrane protein (100% evalue=1.E-160); Agrobacterium tumefaciens Atu4570 ABC transporter, membrane spanning protein (27.2% evalue=1.E-26); ABC transporter permease 2373056 2954037 YPTB2015 Yersinia pseudotuberculosis IP 32953 ABC transporter permease YP_070532.1 2372190 R 273123 CDS YP_070533.1 51596342 2954038 complement(2373053..2374105) 1 NC_006155.1 similar to Mesorhizobium loti mll6255 ABC transporter ATP-binding component (44.5% evalue=2.E-68); Agrobacterium tumefaciens Atu4569 ABC transporter, nucleotide binding/ATPase (45.4% evalue=8.E-68); ABC transporter ATP-binding protein 2374105 2954038 YPTB2016 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_070533.1 2373053 R 273123 CDS YP_070534.1 51596343 2954039 2374304..2375134 1 NC_006155.1 similar to Yersinia pestis YPO2035 hypothetical protein (99.6% evalue=1.E-160); Agrobacterium tumefaciens Atu6144 accF; agrocinopine phosphodiesterase (31.5% evalue=1.E-24); hypothetical protein 2375134 2954039 YPTB2017 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070534.1 2374304 D 273123 CDS YP_070535.1 51596344 2954040 2375106..2376260 1 NC_006155.1 similar to Yersinia pestis YPO2036 transcriptional regulatory protein (100% evalue=0); Agrobacterium tumefaciens AGR_L_592 hypothetical 41.6 KD protein Y4FQ (31.3% evalue=2.E-43); transcriptional regulator 2376260 2954040 YPTB2018 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070535.1 2375106 D 273123 CDS YP_070536.1 51596345 2954041 2376895..2377632 1 NC_006155.1 similar to Yersinia pestis YPO2037 conserved hypothetical protein (100% evalue=1.E-142); Salmonella typhimurium STM1136 ycdX; Histidinol phosphatase and related hydrolases of the PHP family (77.5% evalue=1.E-112); hydrolase 2377632 2954041 YPTB2019 Yersinia pseudotuberculosis IP 32953 hydrolase YP_070536.1 2376895 D 273123 CDS YP_070537.1 51596346 2954042 2377669..2378229 1 NC_006155.1 similar to Yersinia pestis YPO2038 conserved hypothetical protein (100% evalue=1.E-106); Escherichia coli JW1018 ycdY; Hypothetical protein (65.9% evalue=8.E-68); hypothetical protein 2378229 2954042 YPTB2020 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070537.1 2377669 D 273123 CDS YP_070538.1 51596347 2954043 complement(2378526..2379089) 1 NC_006155.1 similar to Yersinia pestis YPO2039 lipoprotein (100% evalue=1.E-102); Salmonella typhimurium STM1164 yceB; outer membrane lipoprotein (65.7% evalue=7.E-66); hypothetical protein 2379089 2954043 YPTB2021 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070538.1 2378526 R 273123 CDS YP_070539.1 51596348 2956979 complement(2379514..2380719) 1 NC_006155.1 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 2380719 yceL 2956979 yceL Yersinia pseudotuberculosis IP 32953 multidrug resistance protein MdtH YP_070539.1 2379514 R 273123 CDS YP_070540.1 51596349 2956457 2381013..2381597 1 NC_006155.1 similar to Yersinia pestis YPO2041 rimJ; ribosomal-protein-alanine acetyltransferase (100% evalue=1.E-114); Salmonella typhimurium STM1167 rimJ; acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 (77.3% evalue=2.E-88); ribosomal-protein-S5-alanine N-acetyltransferase 2381597 rimJ 2956457 rimJ Yersinia pseudotuberculosis IP 32953 ribosomal-protein-S5-alanine N-acetyltransferase YP_070540.1 2381013 D 273123 CDS YP_070541.1 51596350 2954044 2381605..2382306 1 NC_006155.1 similar to Yersinia pestis YPO2042 oxidoreductase (100% evalue=1.E-128); Escherichia coli JW1054 yceH; Hypothetical protein (60.8% evalue=2.E-69); hypothetical protein 2382306 2954044 YPTB2024 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070541.1 2381605 D 273123 CDS YP_070542.1 51596351 2954045 2382317..2383228 1 NC_006155.1 similar to Yersinia pestis YPO2042 oxidoreductase (99.6% evalue=1.E-173); Escherichia coli b1068 mviM; virulence factor mviM homolog (63% evalue=1.E-108); oxidoreductase 2383228 2954045 YPTB2025 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_070542.1 2382317 D 273123 CDS YP_070543.1 51596352 2956112 2383495..2385030 1 NC_006155.1 similar to Yersinia pestis YPO2043 mviN; membrane protein (99.8% evalue=0); Escherichia coli JW1056 mviN; Virulence factor MviN homolog (85.2% evalue=0); virulence factor MviN 2385030 mviN 2956112 mviN Yersinia pseudotuberculosis IP 32953 virulence factor MviN YP_070543.1 2383495 D 273123 CDS YP_070544.1 51596353 2955803 2385477..2387138 1 NC_006155.1 similar to Yersinia pestis YPO3720 shlB, hpmB; hemolysin activator protein (41.3% evalue=1.E-129); hemolysin activator protein HlyB 2387138 HlyB 2955803 HlyB Yersinia pseudotuberculosis IP 32953 hemolysin activator protein HlyB YP_070544.1 2385477 D 273123 CDS YP_070545.1 51596354 2955802 2387168..2392063 1 NC_006155.1 similar to Yersinia pestis YPO3721 hemolysin (30.4% evalue=0); hemolysin HlyA 2392063 HlyA 2955802 HlyA Yersinia pseudotuberculosis IP 32953 hemolysin HlyA YP_070545.1 2387168 D 273123 CDS YP_070546.1 51596355 2955220 complement(2392130..2393860) 1 NC_006155.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2393860 argS 2955220 argS Yersinia pseudotuberculosis IP 32953 arginyl-tRNA synthetase YP_070546.1 2392130 R 273123 CDS YP_070547.1 51596356 2954046 2394413..2394988 1 NC_006155.1 similar to Yersinia pestis YPO2047 conserved hypothetical protein (99.4% evalue=1.E-111); Escherichia coli b1875 yecM; hypothetical 21.4 kD protein in cutC-argS intergenic region (58.2% evalue=2.E-58); hypothetical protein 2394988 2954046 YPTB2030 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070547.1 2394413 D 273123 CDS YP_070548.1 51596357 2955379 2395220..2395984 1 NC_006155.1 similar to Yersinia pestis YPO2048 cutC; copper homeostasis protein (99.6% evalue=1.E-143); Escherichia coli JW1863 cutC; Copper homeostasis protein (56.5% evalue=3.E-78); copper homeostasis protein CutC 2395984 cutC 2955379 cutC Yersinia pseudotuberculosis IP 32953 copper homeostasis protein CutC YP_070548.1 2395220 D 273123 CDS YP_070549.1 51596358 2954047 complement(2396177..2397148) 1 NC_006155.1 similar to Yersinia pestis YPO2049 conserved hypothetical protein (99.3% evalue=0); Salmonella typhi STY2114 conserved hypothetical protein (78.9% evalue=1.E-151); hypothetical protein 2397148 2954047 YPTB2032 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070549.1 2396177 R 273123 CDS YP_070550.1 51596359 2954048 complement(2397145..2397948) 1 NC_006155.1 similar to Yersinia pestis YPO2050 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM1905 yecO; SAM-dependent methyltransferases (85.1% evalue=1.E-118); hypothetical protein 2397948 2954048 YPTB2033 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070550.1 2397145 R 273123 CDS YP_070551.1 51596360 2954049 complement(2398139..2398534) 1 NC_006155.1 similar to Yersinia pestis YPO2051 membrane protein (100% evalue=5.E-71); Escherichia coli ECs2579 hypothetical protein (70.5% evalue=1.E-53); hypothetical protein 2398534 2954049 YPTB2034 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070551.1 2398139 R 273123 CDS YP_070552.1 51596361 2954050 complement(2398714..2399529) 1 NC_006155.1 similar to Yersinia pestis YPO2052 conserved hypothetical protein (99.2% evalue=1.E-163); Salmonella typhi STY2111 yecE; conserved hypothetical protein (62.3% evalue=1.E-100); hypothetical protein 2399529 2954050 YPTB2035 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070552.1 2398714 R 273123 CDS YP_070553.1 51596362 2955249 2400515..2402311 1 NC_006155.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2402311 aspS 2955249 aspS Yersinia pseudotuberculosis IP 32953 aspartyl-tRNA synthetase YP_070553.1 2400515 D 273123 CDS YP_070554.1 51596363 2956165 2402311..2402754 1 NC_006155.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2402754 ntpA 2956165 ntpA Yersinia pseudotuberculosis IP 32953 dATP pyrophosphohydrolase YP_070554.1 2402311 D 273123 CDS YP_070555.1 51596364 2954051 2402812..2403555 1 NC_006155.1 similar to Yersinia pestis YPO2055 conserved hypothetical protein (100% evalue=1.E-137); Salmonella typhimurium STM1899 yebC; cytoplasmic protein (85% evalue=1.E-120); hypothetical protein 2403555 2954051 YPTB2038 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070555.1 2402812 D 273123 CDS YP_070556.1 51596365 2956564 2403764..2404285 1 NC_006155.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2404285 ruvC 2956564 ruvC Yersinia pseudotuberculosis IP 32953 Holliday junction resolvase YP_070556.1 2403764 D 273123 CDS YP_070557.2 161760577 2956562 2404592..2405206 1 NC_006155.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2405206 ruvA 2956562 ruvA Yersinia pseudotuberculosis IP 32953 Holliday junction DNA helicase RuvA YP_070557.2 2404592 D 273123 CDS YP_070558.1 51596367 2956563 2405368..2406372 1 NC_006155.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2406372 ruvB 2956563 ruvB Yersinia pseudotuberculosis IP 32953 Holliday junction DNA helicase RuvB YP_070558.1 2405368 D 273123 CDS YP_070559.1 51596368 2957127 complement(2406427..2407212) 1 NC_006155.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 2407212 znuB 2957127 znuB Yersinia pseudotuberculosis IP 32953 high-affinity zinc transporter membrane protein YP_070559.1 2406427 R 273123 CDS YP_070560.2 161760576 2957128 complement(2407209..2407967) 1 NC_006155.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase 2407967 znuC 2957128 znuC Yersinia pseudotuberculosis IP 32953 high-affinity zinc transporter ATPase YP_070560.2 2407209 R 273123 CDS YP_070561.1 51596370 2957126 2408043..2408999 1 NC_006155.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 2408999 znuA 2957126 znuA Yersinia pseudotuberculosis IP 32953 high-affinity zinc transporter periplasmic protein YP_070561.1 2408043 D 273123 CDS YP_070562.1 51596371 2954052 2409020..2410336 1 NC_006155.1 similar to Yersinia pestis YPO2062 M23/M37 peptidase-family protein (100% evalue=0); Salmonella typhimurium STM1890 yebA; Peptidase (74.7% evalue=0); hypothetical protein 2410336 2954052 YPTB2045 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070562.1 2409020 D 273123 CDS YP_070563.1 51596372 2956084 2410603..2411565 1 NC_006155.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2411565 msbB 2956084 msbB Yersinia pseudotuberculosis IP 32953 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_070563.1 2410603 D 273123 CDS YP_070564.1 51596373 2956382 complement(2411905..2413347) 1 NC_006155.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2413347 pykA 2956382 pykA Yersinia pseudotuberculosis IP 32953 pyruvate kinase YP_070564.1 2411905 R 273123 CDS YP_070565.1 51596374 2955785 complement(2413709..2414578) 1 NC_006155.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2414578 hexR 2955785 hexR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator HexR YP_070565.1 2413709 R 273123 CDS YP_070566.2 161760575 2957129 2414940..2416415 1 NC_006155.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2416415 zwf 2957129 zwf Yersinia pseudotuberculosis IP 32953 glucose-6-phosphate 1-dehydrogenase YP_070566.2 2414940 D 273123 CDS YP_070567.1 51596376 2955495 2416657..2417298 1 NC_006155.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2417298 eda 2955495 eda Yersinia pseudotuberculosis IP 32953 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_070567.1 2416657 D 273123 CDS YP_070568.1 51596377 2954053 2417992..2418456 1 NC_006155.1 similar to Yersinia pestis YPO2068 integral membrane protein (98% evalue=2.E-81); Salmonella typhi STY1585 conserved membrane protein (66.6% evalue=2.E-35); DMT superfamily drug efflux pump 2418456 2954053 YPTB2051 Yersinia pseudotuberculosis IP 32953 DMT superfamily drug efflux pump YP_070568.1 2417992 D 273123 CDS YP_070569.1 51596378 2954054 2418443..2418772 1 NC_006155.1 with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtI 2418772 2954054 YPTB2052 Yersinia pseudotuberculosis IP 32953 multidrug efflux system protein MdtI YP_070569.1 2418443 D 273123 CDS YP_070570.1 51596379 2954055 complement(2418938..2419282) 1 NC_006155.1 similar to Yersinia pestis YPO2070 conserved hypothetical protein (100% evalue=5.E-61); Escherichia coli ECs2518 hypothetical protein (72.8% evalue=5.E-43); hypothetical protein 2419282 2954055 YPTB2053 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070570.1 2418938 R 273123 CDS YP_070571.1 51596380 2954056 2419413..2421317 1 NC_006155.1 similar to Yersinia pestis YPO2071 DEAD box family helicase (99.6% evalue=0); Escherichia coli ECs2517 enzyme (79.9% evalue=0); DEAD/DEAH box helicase 2421317 2954056 YPTB2054 Yersinia pseudotuberculosis IP 32953 DEAD/DEAH box helicase YP_070571.1 2419413 D 273123 CDS YP_070572.1 51596381 2954057 2421389..2422087 1 NC_006155.1 similar to Yersinia pestis YPO2072 conserved hypothetical protein (99.5% evalue=1.E-130); Salmonella typhimurium STM1820 yeaZ; molecular chaperone (74.6% evalue=3.E-95); hypothetical protein 2422087 2954057 YPTB2055 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070572.1 2421389 D 273123 CDS YP_070573.1 51596382 2954058 2422224..2422829 1 NC_006155.1 similar to Yersinia pestis YPO2073 lipoprotein (100% evalue=1.E-115); Escherichia coli ECs2515 outer membrane protein (63.7% evalue=5.E-63); lipoprotein 2422829 2954058 YPTB2056 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070573.1 2422224 D 273123 CDS YP_070574.1 51596383 2955523 2423483..2425171 1 NC_006155.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2425171 fadD 2955523 fadD Yersinia pseudotuberculosis IP 32953 long-chain-fatty-acid--CoA ligase YP_070574.1 2423483 D 273123 CDS YP_070575.1 51596384 2956468 2425331..2426452 1 NC_006155.1 similar to Yersinia pestis YPO2075 rnd; ribonuclease D (99.7% evalue=0); Escherichia coli JW1793 rnd; ribonuclease D (67.8% evalue=1.E-148); ribonuclease D 2426452 rnd 2956468 rnd Yersinia pseudotuberculosis IP 32953 ribonuclease D YP_070575.1 2425331 D 273123 CDS YP_070576.1 51596385 2956046 complement(2426689..2426958) 1 NC_006155.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2426958 minE 2956046 minE Yersinia pseudotuberculosis IP 32953 cell division topological specificity factor MinE YP_070576.1 2426689 R 273123 CDS YP_070577.1 51596386 2956045 complement(2426962..2427774) 1 NC_006155.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 2427774 minD 2956045 minD Yersinia pseudotuberculosis IP 32953 cell division inhibitor MinD YP_070577.1 2426962 R 273123 CDS YP_070578.1 51596387 2956044 complement(2427799..2428485) 1 NC_006155.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2428485 minC 2956044 minC Yersinia pseudotuberculosis IP 32953 septum formation inhibitor YP_070578.1 2427799 R 273123 CDS YP_070579.1 51596388 2954059 2429206..2429478 1 NC_006155.1 similar to Yersinia pestis YPO2080 conserved hypothetical protein (100% evalue=5.E-46); Escherichia coli Z1941 ycgL; orf, hypothetical protein (71.7% evalue=5.E-31); hypothetical protein 2429478 2954059 YPTB2062 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070579.1 2429206 D 273123 CDS YP_070580.1 51596389 2954060 2429619..2430704 1 NC_006155.1 similar to Yersinia pestis YPO2081 lipoprotein (99.7% evalue=0); Vibrio cholerae VC1956 lytic murein transglycosylase, (48.6% evalue=4.E-83); lipoprotein 2430704 2954060 YPTB2063 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070580.1 2429619 D 273123 CDS YP_070581.1 51596390 2954061 2430775..2431431 1 NC_006155.1 similar to Yersinia pestis YPO2082 fumarylacetoacetate hydrolase family protein (100% evalue=1.E-122); Salmonella typhimurium STM1812 ycgM; Fumarylacetoacetate (FAA) hydrolase family (72.6% evalue=6.E-92); hypothetical protein 2431431 2954061 YPTB2064 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070581.1 2430775 D 273123 CDS YP_070582.1 51596391 2954062 2431534..2431980 1 NC_006155.1 similar to Yersinia pestis YPO2083 conserved hypothetical protein (100% evalue=1.E-88); Escherichia coli b1181 ycgN; hypothetical 18.6 kD protein in minC-shea intergenic region (85.1% evalue=2.E-75); hypothetical protein 2431980 2954062 YPTB2065 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070582.1 2431534 D 273123 CDS YP_070583.1 51596392 2954063 complement(2432081..2433253) 1 NC_006155.1 similar to Yersinia pestis YPO2137 conserved hypothetical phage protein (99.7% evalue=0); Staphylococcus aureus_N315 SA2061 hypothetical protein (21.4% evalue=7.E-09); hypothetical protein 2433253 2954063 YPTB2066 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070583.1 2432081 R 273123 CDS YP_070584.1 51596393 2954064 complement(2433257..2434456) 1 NC_006155.1 similar to Yersinia pestis YPO2138 aminotransferase (98.7% evalue=0); Salmonella typhimurium STM2543 nifS; aminotransferase class-V (50.7% evalue=1.E-101); aminotransferase 2434456 2954064 YPTB2067 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_070584.1 2433257 R 273123 CDS YP_070585.1 51596394 2954065 complement(2434473..2435213) 1 NC_006155.1 similar to Yersinia pestis YPO2139 hypothetical phage protein (100% evalue=1.E-136); hypothetical protein 2435213 2954065 YPTB2068 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070585.1 2434473 R 273123 CDS YP_070586.1 51596395 2954066 2436305..2436661 1 NC_006155.1 similar to Yersinia pestis YPO2140 hypothetical phage protein (100% evalue=1.E-59); hypothetical protein 2436661 2954066 YPTB2069 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070586.1 2436305 D 273123 CDS YP_070587.1 51596396 2955487 complement(2437078..2437608) 1 NC_006155.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 2437608 dsbB 2955487 dsbB Yersinia pseudotuberculosis IP 32953 disulfide bond formation protein B YP_070587.1 2437078 R 273123 CDS YP_070588.1 51596397 2956138 complement(2437844..2439418) 1 NC_006155.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 2439418 nhaB 2956138 nhaB Yersinia pseudotuberculosis IP 32953 sodium/proton antiporter YP_070588.1 2437844 R 273123 CDS YP_070589.1 51596398 2955528 2439662..2440381 1 NC_006155.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2440381 fadR 2955528 fadR Yersinia pseudotuberculosis IP 32953 fatty acid metabolism regulator YP_070589.1 2439662 D 273123 CDS YP_070590.1 51596399 2954067 complement(2440599..2442134) 1 NC_006155.1 similar to Yersinia pestis YPO2145 conserved hypothetical protein (99.8% evalue=0); Escherichia coli JW1177 ycgB; Hypothetical protein (84.8% evalue=0); SpoVR family protein 2442134 2954067 YPTB2073 Yersinia pseudotuberculosis IP 32953 SpoVR family protein YP_070590.1 2440599 R 273123 CDS YP_070591.1 51596400 2955422 2442598..2443902 1 NC_006155.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2443902 dadA 2955422 dadA Yersinia pseudotuberculosis IP 32953 D-amino acid dehydrogenase small subunit YP_070591.1 2442598 D 273123 CDS YP_070592.1 51596401 2954068 complement(2443931..2445124) 1 NC_006155.1 similar to Yersinia pestis YPO2148 multidrug resistance protein (97.6% evalue=0); Vibrio cholerae VC0069 multidrug resistance protein, (36.3% evalue=6.E-59); MFS multidrug efflux antiporter 2445124 2954068 YPTB2075 Yersinia pseudotuberculosis IP 32953 MFS multidrug efflux antiporter YP_070592.1 2443931 R 273123 CDS YP_070593.1 51596402 2954069 complement(2445389..2446258) 1 NC_006155.1 similar to Yersinia pestis YPO2149 conserved hypothetical protein (99.6% evalue=1.E-170); Salmonella typhimurium STM0951 cytoplasmic protein (68.5% evalue=1.E-118); hypothetical protein 2446258 2954069 YPTB2076 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070593.1 2445389 R 273123 CDS YP_070594.1 51596403 2954070 2446456..2447361 1 NC_006155.1 similar to Yersinia pestis YPO2150 LysR-family transcriptional regulatory protein (100% evalue=1.E-169); Salmonella typhimurium STM0952 transcriptional regulator, lysR family (57% evalue=3.E-94); LysR family transcriptional regulator 2447361 2954070 YPTB2077 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_070594.1 2446456 D 273123 CDS YP_070595.1 51596404 2954071 complement(2447396..2448514) 1 NC_006155.1 similar to Yersinia pestis YPO2151 membrane protein (99.7% evalue=0); Mesorhizobium loti mll2462 hypothetical protein (52.4% evalue=1.E-101); DMT superfamliy Ni++ efflux protein 2448514 2954071 YPTB2078 Yersinia pseudotuberculosis IP 32953 DMT superfamliy Ni++ efflux protein YP_070595.1 2447396 R 273123 CDS YP_070596.1 51596405 2954072 complement(2448622..2449896) 1 NC_006155.1 similar to Yersinia pestis YPO2152 conserved hypothetical protein (100% evalue=0); Escherichia coli JW1773 yeaH; Hypothetical protein (86.6% evalue=0); hypothetical protein 2449896 2954072 YPTB2079 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070596.1 2448622 R 273123 CDS YP_070597.1 51596406 2954073 complement(2450046..2451980) 1 NC_006155.1 similar to Yersinia pestis YPO2153 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM1285 yeaG; Ser protein kinase (94.8% evalue=0); hypothetical protein 2451980 2954073 YPTB2080 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070597.1 2450046 R 273123 CDS YP_070598.1 51596407 2954074 2452403..2453173 1 NC_006155.1 similar to Yersinia pestis YPO2155 exported protein (99.6% evalue=1.E-151); Salmonella typhimurium STM1286 mipA; scaffolding protein for murein-synthesizing holoenzyme (57.8% evalue=2.E-81); hypothetical protein 2453173 2954074 YPTB2081 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070598.1 2452403 D 273123 CDS YP_070599.1 51596408 2954075 complement(2453246..2454121) 1 NC_006155.1 similar to Yersinia pestis YPO2156 conserved hypothetical protein (100% evalue=1.E-170); Salmonella typhimurium STM1289 yeaD; enzymes related to aldose 1-epimerase (58.4% evalue=1.E-102); hypothetical protein 2454121 2954075 YPTB2082 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070599.1 2453246 R 273123 CDS YP_070600.1 51596409 2955676 complement(2454445..2455440) 1 NC_006155.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 2455440 gapA 2955676 gapA Yersinia pseudotuberculosis IP 32953 glyceraldehyde-3-phosphate dehydrogenase YP_070600.1 2454445 R 273123 CDS YP_070601.1 51596410 2954076 2455788..2456201 1 NC_006155.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2456201 2954076 YPTB2084 Yersinia pseudotuberculosis IP 32953 methionine sulfoxide reductase B YP_070601.1 2455788 D 273123 CDS YP_070602.1 51596411 2954077 2456272..2456544 1 NC_006155.1 similar to Yersinia pestis YPO2159 conserved hypothetical protein (100% evalue=1.E-45); Salmonella typhi STY1823 conserved hypothetical protein (73.4% evalue=6.E-29); hypothetical protein 2456544 2954077 YPTB2085 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070602.1 2456272 D 273123 CDS YP_070603.1 51596412 2956288 complement(2456678..2457325) 1 NC_006155.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 2457325 pncA 2956288 pncA Yersinia pseudotuberculosis IP 32953 nicotinamidase/pyrazinamidase YP_070603.1 2456678 R 273123 CDS YP_070604.1 51596413 2955195 complement(2457340..2458356) 1 NC_006155.1 converts asparagine to aspartate and ammonia; asparaginase 2458356 ansA 2955195 ansA Yersinia pseudotuberculosis IP 32953 asparaginase YP_070604.1 2457340 R 273123 CDS YP_070605.1 51596414 2956630 complement(2458473..2460323) 1 NC_006155.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 2460323 sppA 2956630 sppA Yersinia pseudotuberculosis IP 32953 protease 4 YP_070605.1 2458473 R 273123 CDS YP_070606.1 51596415 2954078 2460486..2461037 1 NC_006155.1 similar to Yersinia pestis YPO2163 nitroreductase (100% evalue=1.E-103); Salmonella typhimurium STM1296 ydjA; oxidoreductase (66.1% evalue=2.E-65); hypothetical protein 2461037 2954078 YPTB2089 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070606.1 2460486 D 273123 CDS YP_070607.1 51596416 2956591 2461262..2462308 1 NC_006155.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 2462308 selD 2956591 selD Yersinia pseudotuberculosis IP 32953 selenophosphate synthetase YP_070607.1 2461262 D 273123 CDS YP_070608.1 51596417 2956725 2462367..2464295 1 NC_006155.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2464295 topB 2956725 topB Yersinia pseudotuberculosis IP 32953 DNA topoisomerase III YP_070608.1 2462367 D 273123 CDS YP_070609.1 51596418 2954079 2464292..2464582 1 NC_006155.1 similar to Yersinia pestis YPO2166 exported protein (100% evalue=6.E-52); Salmonella typhi STY1814 exported protein (45.2% evalue=3.E-18); hypothetical protein 2464582 2954079 YPTB2092 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070609.1 2464292 D 273123 CDS YP_070610.1 51596419 2956166 complement(2464595..2464981) 1 NC_006155.1 similar to Yersinia pestis YPO2167 nudG; pyrophosphohydrolase (100% evalue=1.E-70); Escherichia coli JW1748 hypothetical protein (65.3% evalue=4.E-40); pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 2464981 nudG 2956166 nudG Yersinia pseudotuberculosis IP 32953 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_070610.1 2464595 R 273123 CDS YP_070611.1 51596420 2956911 complement(2465079..2465885) 1 NC_006155.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2465885 xthA 2956911 xthA Yersinia pseudotuberculosis IP 32953 exonuclease III YP_070611.1 2465079 R 273123 CDS YP_070612.1 51596421 2954080 2466695..2467555 1 NC_006155.1 similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (25.5% evalue=2.E-11); LysR family transcriptional regulator 2467555 2954080 YPTB2095 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_070612.1 2466695 D 273123 CDS YP_070613.1 51596422 2954081 2467797..2469005 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 2469005 2954081 YPTB2096 Yersinia pseudotuberculosis IP 32953 transposase YP_070613.1 2467797 D 273123 CDS YP_070614.1 51596423 2956379 complement(2469767..2470615) 1 NC_006155.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2470615 purU 2956379 purU Yersinia pseudotuberculosis IP 32953 formyltetrahydrofolate deformylase YP_070614.1 2469767 R 273123 CDS YP_070615.1 51596424 2954082 complement(2470699..2471163) 1 NC_006155.1 similar to Yersinia pestis YPO2172 conserved hypothetical protein (98.7% evalue=2.E-92); Escherichia coli Z2009 ychJ; orf, hypothetical protein (53.2% evalue=2.E-43); hypothetical protein 2471163 2954082 YPTB2098 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070615.1 2470699 R 273123 CDS YP_070616.1 51596425 2954083 2472497..2473513 1 NC_006155.1 similar to Yersinia pestis YPO2173 probable response regulator (99.7% evalue=0); Escherichia coli Z2011 hnr; Hnr protein (64.6% evalue=1.E-126); response regulator of RpoS 2473513 2954083 YPTB2099 Yersinia pseudotuberculosis IP 32953 response regulator of RpoS YP_070616.1 2472497 D 273123 CDS YP_070617.1 51596426 2954084 2473820..2475166 1 NC_006155.1 similar to Yersinia pestis YPO2174 nucleotide sugar dehydrogenase (100% evalue=0); Mesorhizobium loti mlr5265 UDP-glucose dehydrogenase (66.7% evalue=1.E-169); nucleotide sugar dehydrogenase 2475166 2954084 YPTB2100 Yersinia pseudotuberculosis IP 32953 nucleotide sugar dehydrogenase YP_070617.1 2473820 D 273123 CDS YP_070618.1 51596427 2955815 complement(2475601..2476008) 1 NC_006155.1 similar to Yersinia pestis YPO2175 hns, hnsA, drdX, osmZ, bglY, msyA, cur, pilG, topS; DNA-binding protein Hns (97.7% evalue=7.E-67); Salmonella typhi STY1299 hns; DNA-binding protein (histone-like protein Hlp-II) (86.6% evalue=6.E-61); global DNA-binding transcriptional dual regulator H-NS 2476008 hns 2955815 hns Yersinia pseudotuberculosis IP 32953 global DNA-binding transcriptional dual regulator H-NS YP_070618.1 2475601 R 273123 CDS YP_070619.1 51596428 2956674 2476758..2477348 1 NC_006155.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2477348 tdk 2956674 tdk Yersinia pseudotuberculosis IP 32953 thymidine kinase YP_070619.1 2476758 D 273123 CDS YP_070620.1 51596429 2955174 complement(2478099..2480774) 1 NC_006155.1 similar to Yersinia pestis YPO2180 adhE, ana; aldehyde-alcohol dehydrogenase (100% evalue=0); Escherichia coli JW1228 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase (90.6% evalue=0); bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2480774 adhE 2955174 adhE Yersinia pseudotuberculosis IP 32953 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_070620.1 2478099 R 273123 CDS YP_070621.1 51596430 2954085 2481630..2482274 1 NC_006155.1 similar to Yersinia pestis YPO2181 membrane protein (99% evalue=1.E-114); Salmonella typhimurium STM1748 ychE; integral membrane proteins of the MarC family (84.4% evalue=9.E-96); hypothetical protein 2482274 2954085 YPTB2104 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070621.1 2481630 D 273123 CDS YP_070622.1 51596431 2956195 2483112..2484749 1 NC_006155.1 similar to Yersinia pestis YPO2182 oppA; periplasmic oligopeptide-binding protein precursor (100% evalue=0); Salmonella typhimurium STM1746 oppA; ABC superfamily (periplasm), oligopeptide transport protein with chaperone properties (78.4% evalue=0); oligopeptide-ABC transporter substrate-binding protein oppA 2484749 oppA 2956195 oppA Yersinia pseudotuberculosis IP 32953 oligopeptide-ABC transporter substrate-binding protein oppA YP_070622.1 2483112 D 273123 CDS YP_070623.1 51596432 2956196 2484836..2485756 1 NC_006155.1 similar to Yersinia pestis YPO2183 oppB; oligopeptide transport system permease (100% evalue=1.E-171); Escherichia coli ECs1744 oligopeptide transport permease (92.4% evalue=1.E-158); oligopeptide transporter permease 2485756 oppB 2956196 oppB Yersinia pseudotuberculosis IP 32953 oligopeptide transporter permease YP_070623.1 2484836 D 273123 CDS YP_070624.1 51596433 2956197 2485775..2486680 1 NC_006155.1 similar to Yersinia pestis YPO2184 oppC; oligopeptide transport system permease (100% evalue=1.E-166); Escherichia coli ECs1745 oligopeptide transport system permease OppC (92.3% evalue=1.E-156); oligopeptide ABC transporter permease OppC 2486680 oppC 2956197 oppC Yersinia pseudotuberculosis IP 32953 oligopeptide ABC transporter permease OppC YP_070624.1 2485775 D 273123 CDS YP_070625.1 51596434 2956198 2486692..2487693 1 NC_006155.1 similar to Yersinia pestis YPO2185 oppD; oligopeptide transport ATP-binding protein (100% evalue=0); Escherichia coli ECs1746 oligopeptide ABC transport system ATP-binding protein OppD (87.6% evalue=1.E-162); oligopeptide ABC transporter ATP-binding protein 2487693 oppD 2956198 oppD Yersinia pseudotuberculosis IP 32953 oligopeptide ABC transporter ATP-binding protein YP_070625.1 2486692 D 273123 CDS YP_070626.1 51596435 2956199 2487690..2488691 1 NC_006155.1 similar to Yersinia pestis YPO2186 oppF; oligopeptide transport ATP-binding protein (100% evalue=0); Escherichia coli ECs1747 oligopeptide ABC transport system ATP-binding protein OppF (90.7% evalue=1.E-175); oligopeptide ABC transporter ATP-binding protein OppF 2488691 oppF 2956199 oppF Yersinia pseudotuberculosis IP 32953 oligopeptide ABC transporter ATP-binding protein OppF YP_070626.1 2487690 D 273123 CDS YP_070627.1 51596436 2954086 complement(2489775..2490098) 1 NC_006155.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2490098 2954086 YPTB2110 Yersinia pseudotuberculosis IP 32953 dsDNA-mimic protein YP_070627.1 2489775 R 273123 CDS YP_070628.1 51596437 2955341 complement(2490263..2491723) 1 NC_006155.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2491723 cls 2955341 cls Yersinia pseudotuberculosis IP 32953 cardiolipin synthetase YP_070628.1 2490263 R 273123 CDS YP_070629.1 51596438 2954087 complement(2491792..2492040) 1 NC_006155.1 similar to Yersinia pestis YPO2189 hypothetical protein, 100% identical; hypothetical protein 2492040 2954087 YPTB2112 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070629.1 2491792 R 273123 CDS YP_070630.1 51596439 2954088 2492783..2493322 1 NC_006155.1 similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (44.9% evalue=9.E-39); attachment invasion locus protein 2493322 2954088 YPTB2113 Yersinia pseudotuberculosis IP 32953 attachment invasion locus protein YP_070630.1 2492783 D 273123 CDS YP_070631.1 51596440 2954089 2493542..2493805 1 NC_006155.1 similar to Yersinia pestis YPO2191 hypothetical protein (100% evalue=8.E-47); hypothetical protein 2493805 2954089 YPTB2114 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070631.1 2493542 D 273123 CDS YP_070632.1 51596441 2954090 complement(2493836..2494165) 1 NC_006155.1 similar to Mesorhizobium loti msl7161 hypothetical protein (53.4% evalue=2.E-13); C. jejuni Cj1164c hypothetical protein Cj1164c (49.4% evalue=9.E-16); hypothetical protein 2494165 2954090 YPTB2115 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070632.1 2493836 R 273123 CDS YP_070633.1 51596442 2954091 complement(2494403..2494699) 1 NC_006155.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 2494699 2954091 YPTB2116 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070633.1 2494403 R 273123 CDS YP_070634.1 51596443 2956723 2495000..2495746 1 NC_006155.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transporter 2495746 tonB 2956723 tonB Yersinia pseudotuberculosis IP 32953 transporter YP_070634.1 2495000 D 273123 CDS YP_070635.1 51596444 2954092 complement(2495815..2496264) 1 NC_006155.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2496264 2954092 YPTB2118 Yersinia pseudotuberculosis IP 32953 acyl-CoA thioester hydrolase YP_070635.1 2495815 R 273123 CDS YP_070636.1 51596445 2955902 complement(2496344..2496886) 1 NC_006155.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2496886 ispZ 2955902 ispZ Yersinia pseudotuberculosis IP 32953 intracellular septation protein A YP_070636.1 2496344 R 273123 CDS YP_070637.1 51596446 2954093 2497117..2498856 1 NC_006155.1 similar to Vibrio cholerae VCA0103 sulfate permease family protein (57.4% evalue=1.E-180); Pseudomonas aeruginosa PA1647 probable sulfate transporter (42.6% evalue=1.E-114); sulfate permease family protein 2498856 2954093 YPTB2120 Yersinia pseudotuberculosis IP 32953 sulfate permease family protein YP_070637.1 2497117 D 273123 CDS YP_070638.1 51596447 2954094 complement(2498977..2499747) 1 NC_006155.1 similar to Yersinia pestis YPO2199 membrane protein (100% evalue=1.E-131); Salmonella typhimurium STM1734 yciC; inner membrane protein (50.6% evalue=1.E-68); hypothetical protein 2499747 2954094 YPTB2121 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070638.1 2498977 R 273123 CDS YP_070639.1 51596448 2954095 2499909..2500124 1 NC_006155.1 similar to Yersinia pestis YPO2200 hypothetical protein, 100% identical; hypothetical protein 2500124 2954095 YPTB2122 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070639.1 2499909 D 273123 CDS YP_070640.1 51596449 2956192 2500233..2500868 1 NC_006155.1 receptor for colicin S4; outer membrane protein W 2500868 ompW 2956192 ompW Yersinia pseudotuberculosis IP 32953 outer membrane protein W YP_070640.1 2500233 D 273123 CDS YP_070641.1 51596450 2954096 complement(2501015..2501329) 1 NC_006155.1 similar to Yersinia pestis YPO2202 lipoprotein (100% evalue=1.E-51); lipoprotein 2501329 2954096 YPTB2124 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070641.1 2501015 R 273123 CDS YP_070642.1 51596451 2956825 complement(2501672..2502478) 1 NC_006155.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2502478 trpA 2956825 trpA Yersinia pseudotuberculosis IP 32953 tryptophan synthase subunit alpha YP_070642.1 2501672 R 273123 CDS YP_070643.1 51596452 2956826 complement(2502478..2503668) 1 NC_006155.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2503668 trpB 2956826 trpB Yersinia pseudotuberculosis IP 32953 tryptophan synthase subunit beta YP_070643.1 2502478 R 273123 CDS YP_070644.1 51596453 2956827 complement(2503803..2505230) 1 NC_006155.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2505230 trpC 2956827 trpC Yersinia pseudotuberculosis IP 32953 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_070644.1 2503803 R 273123 CDS YP_070645.1 51596454 2956828 complement(2505234..2506232) 1 NC_006155.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2506232 trpD 2956828 trpD Yersinia pseudotuberculosis IP 32953 anthranilate phosphoribosyltransferase YP_070645.1 2505234 R 273123 CDS YP_070646.1 51596455 2956830 complement(2506247..2506825) 1 NC_006155.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2506825 trpG 2956830 trpG Yersinia pseudotuberculosis IP 32953 anthranilate synthase component II YP_070646.1 2506247 R 273123 CDS YP_070647.1 51596456 2956829 complement(2506825..2508390) 1 NC_006155.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2508390 trpE 2956829 trpE Yersinia pseudotuberculosis IP 32953 anthranilate synthase component I YP_070647.1 2506825 R 273123 CDS YP_070649.1 51596458 2954098 complement(2508597..2508725) 1 NC_006155.1 similar to Yersinia pestis YPO2210 hypothetical protein, 98% identical.; hypothetical protein 2508725 2954098 YPTB2132 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070649.1 2508597 R 273123 CDS YP_070650.1 51596459 2956831 2508842..2509741 1 NC_006155.1 similar to Yersinia pestis YPO2211 trpH; conserved hypothetical protein (100% evalue=1.E-173); Escherichia coli ECs1838 enzymes (72.9% evalue=1.E-113); hypothetical protein 2509741 trpH 2956831 trpH Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070650.1 2508842 D 273123 CDS YP_070651.1 51596460 2954099 2509758..2510378 1 NC_006155.1 similar to Yersinia pestis YPO2212 conserved hypothetical protein (100% evalue=1.E-117); Salmonella typhi STY1330 conserved hypothetical protein (82.4% evalue=1.E-97); hypothetical protein 2510378 2954099 YPTB2134 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070651.1 2509758 D 273123 CDS YP_070652.1 51596461 2954100 2510708..2511742 1 NC_006155.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2511742 2954100 YPTB2135 Yersinia pseudotuberculosis IP 32953 23S rRNA pseudouridylate synthase B YP_070652.1 2510708 D 273123 CDS YP_070653.1 51596462 2955301 complement(2511865..2512455) 1 NC_006155.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2512455 btuR 2955301 btuR Yersinia pseudotuberculosis IP 32953 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_070653.1 2511865 R 273123 CDS YP_070654.1 51596463 2954101 complement(2512472..2513233) 1 NC_006155.1 similar to Yersinia pestis YPO2215 short chain dehydrogenase (100% evalue=1.E-140); Salmonella typhi STY1333 hypothetical oxidoreductase (75% evalue=1.E-105); short chain dehydrogenase 2513233 2954101 YPTB2137 Yersinia pseudotuberculosis IP 32953 short chain dehydrogenase YP_070654.1 2512472 R 273123 CDS YP_070655.1 51596464 2956621 2513405..2514451 1 NC_006155.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2514451 sohB 2956621 sohB Yersinia pseudotuberculosis IP 32953 periplasmic protease YP_070655.1 2513405 D 273123 CDS YP_070656.1 51596465 2954102 complement(2514570..2514821) 1 NC_006155.1 similar to Yersinia pestis YPO2217 conserved hypothetical protein (100% evalue=4.E-43); Escherichia coli ECs1845 hypothetical protein (68.6% evalue=5.E-27); hypothetical protein 2514821 2954102 YPTB2139 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070656.1 2514570 R 273123 CDS YP_070657.1 51596466 2956724 2515240..2517855 1 NC_006155.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2517855 topA 2956724 topA Yersinia pseudotuberculosis IP 32953 DNA topoisomerase I YP_070657.1 2515240 D 273123 CDS YP_070658.1 51596467 2955399 2518252..2519226 1 NC_006155.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2519226 cysB 2955399 cysB Yersinia pseudotuberculosis IP 32953 transcriptional regulator CysB YP_070658.1 2518252 D 273123 CDS YP_070659.1 51596468 2954103 2519562..2520419 1 NC_006155.1 similar to Yersinia pestis YPO2220 hypothetical protein (99.2% evalue=1.E-165); hypothetical protein 2520419 2954103 YPTB2142 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070659.1 2519562 D 273123 CDS YP_070660.1 51596469 2955165 2520783..2523455 1 NC_006155.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2523455 acnA 2955165 acnA Yersinia pseudotuberculosis IP 32953 aconitate hydratase YP_070660.1 2520783 D 273123 CDS YP_070661.1 51596470 2956450 complement(2523619..2524209) 1 NC_006155.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2524209 ribA 2956450 ribA Yersinia pseudotuberculosis IP 32953 GTP cyclohydrolase II YP_070661.1 2523619 R 273123 CDS YP_070662.1 51596471 2956245 2524715..2525476 1 NC_006155.1 similar to Yersinia pestis YPO2223 pgpB; phosphatidylglycerophosphatase B (100% evalue=1.E-149); Salmonella typhimurium STM1710 pgpB; phosphatidylglycerophosphatase B (58.1% evalue=4.E-86); phosphatidylglycerophosphatase B 2525476 pgpB 2956245 pgpB Yersinia pseudotuberculosis IP 32953 phosphatidylglycerophosphatase B YP_070662.1 2524715 D 273123 CDS YP_070663.1 51596472 2954104 2525657..2525968 1 NC_006155.1 similar to Yersinia pestis YPO2224 membrane protein (99% evalue=3.E-50); Escherichia coli JW1271 yciS, yciM; Hypothetical protein (67.6% evalue=9.E-34); hypothetical protein 2525968 2954104 YPTB2146 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070663.1 2525657 D 273123 CDS YP_070664.1 51596473 2954105 2525975..2527144 1 NC_006155.1 similar to Yersinia pestis YPO2225 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM1708 yciM; N-acetylglucosaminyl transferase (78.9% evalue=0); hypothetical protein 2527144 2954105 YPTB2147 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070664.1 2525975 D 273123 CDS YP_070665.1 51596474 2954106 complement(2527266..2527568) 1 NC_006155.1 similar to Yersinia pestis YPO2226 hypothetical protein (100% evalue=1.E-48); hypothetical protein 2527568 2954106 YPTB2148 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070665.1 2527266 R 273123 CDS YP_070666.1 51596475 2956388 2528035..2528772 1 NC_006155.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2528772 pyrF 2956388 pyrF Yersinia pseudotuberculosis IP 32953 orotidine 5'-phosphate decarboxylase YP_070666.1 2528035 D 273123 CDS YP_070667.1 51596476 2954107 2528772..2529098 1 NC_006155.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 2529098 2954107 YPTB2150 Yersinia pseudotuberculosis IP 32953 translation initiation factor Sui1 YP_070667.1 2528772 D 273123 CDS YP_070668.1 51596477 2956200 complement(2529354..2529569) 1 NC_006155.1 similar to Yersinia pestis YPO2229 osmB; osmotically inducible lipoprotein B precursor (100% evalue=9.E-33); Salmonella typhi STY1346 osmB; osmotically inducible lipoprotein B precursor (79.1% evalue=2.E-25); lipoprotein 2529569 osmB 2956200 osmB Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070668.1 2529354 R 273123 CDS YP_070669.1 51596478 2955206 2530049..2530744 1 NC_006155.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2530744 araD 2955206 araD Yersinia pseudotuberculosis IP 32953 L-ribulose-5-phosphate 4-epimerase YP_070669.1 2530049 D 273123 CDS YP_070670.1 51596479 2954108 complement(2530773..2531021) 1 NC_006155.1 similar to Yersinia pestis YPO2231 hypothetical protein (100% evalue=6.E-42); Caulobacter crescentus CC0773 hypothetical protein (39.5% evalue=2.E-12); hypothetical protein 2531021 2954108 YPTB2153 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070670.1 2530773 R 273123 CDS YP_070671.1 51596480 2956047 2531355..2532020 1 NC_006155.1 similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 2532020 mipB 2956047 mipB Yersinia pseudotuberculosis IP 32953 fructose-6-phosphate aldolase YP_070671.1 2531355 D 273123 CDS YP_070672.1 51596481 2954109 complement(2532137..2532442) 1 NC_006155.1 similar to Yersinia pestis YPO2233 conserved hypothetical protein (99% evalue=2.E-57); Escherichia coli JW0591 ybdD; Hypothetical protein (ORF2) (54% evalue=2.E-09); hypothetical protein 2532442 2954109 YPTB2155 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070672.1 2532137 R 273123 CDS YP_070673.1 51596482 2955377 complement(2532435..2534501) 1 NC_006155.1 similar to Yersinia pestis YPO2234 cstA; carbon starvation protein A (99.7% evalue=0); Ralstonia solanacearum RS01844 cstA, RSc0022; probable carbon starvation A transmembrane protein (64.4% evalue=0); carbon starvation protein A 2534501 cstA 2955377 cstA Yersinia pseudotuberculosis IP 32953 carbon starvation protein A YP_070673.1 2532435 R 273123 CDS YP_070674.1 51596483 2956466 complement(2534851..2536785) 1 NC_006155.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2536785 rnb 2956466 rnb Yersinia pseudotuberculosis IP 32953 exoribonuclease II YP_070674.1 2534851 R 273123 CDS YP_070675.1 51596484 2954110 2537434..2538744 1 NC_006155.1 similar to Yersinia pestis YPO2237 integral membrane protein (99.7% evalue=0); Ralstonia solanacearum RS01194 probable permease transmembrane protein (60.2% evalue=1.E-155); major facilitator superfamily tartrate transporter 2538744 2954110 YPTB2158 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily tartrate transporter YP_070675.1 2537434 D 273123 CDS YP_070676.1 51596485 2954111 2538824..2539822 1 NC_006155.1 similar to Yersinia pestis YPO2238 conserved hypothetical protein (99.3% evalue=0); Brucella melitensis BMEII1094 4-hydroxybutyrate dehydrogenase (48.8% evalue=2.E-80); hypothetical protein 2539822 2954111 YPTB2159 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070676.1 2538824 D 273123 CDS YP_070677.1 51596486 2956162 complement(2539989..2540630) 1 NC_006155.1 DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; endonuclease III 2540630 nth 2956162 nth Yersinia pseudotuberculosis IP 32953 endonuclease III YP_070677.1 2539989 R 273123 CDS YP_070678.1 51596487 2954112 complement(2540627..2541328) 1 NC_006155.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 2541328 2954112 YPTB2161 Yersinia pseudotuberculosis IP 32953 electron transport complex protein RsxE YP_070678.1 2540627 R 273123 CDS YP_070679.1 51596488 2954113 complement(2541325..2541954) 1 NC_006155.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2541954 2954113 YPTB2162 Yersinia pseudotuberculosis IP 32953 electron transport complex protein RnfG YP_070679.1 2541325 R 273123 CDS YP_070680.1 51596489 2954114 complement(2541964..2543019) 1 NC_006155.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2543019 rnfD 2954114 rnfD Yersinia pseudotuberculosis IP 32953 electron transport complex protein RnfD YP_070680.1 2541964 R 273123 CDS YP_070681.1 51596490 2954115 2543547..2544440 1 NC_006155.1 similar to Yersinia pestis YPO2243 AraC-family transcriptional regulatory protein (99.6% evalue=1.E-170); AraC family transcriptional regulator 2544440 2954115 YPTB2164 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_070681.1 2543547 D 273123 CDS YP_070682.1 51596491 2954116 complement(2544545..2546524) 1 NC_006155.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 2546524 2954116 YPTB2165 Yersinia pseudotuberculosis IP 32953 electron transport complex protein RnfC YP_070682.1 2544545 R 273123 CDS YP_070683.1 51596492 2954117 complement(2546517..2547140) 1 NC_006155.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2547140 2954117 YPTB2166 Yersinia pseudotuberculosis IP 32953 electron transport complex protein RnfB YP_070683.1 2546517 R 273123 CDS YP_070684.1 51596493 2954118 complement(2547140..2547721) 1 NC_006155.1 similar to Yersinia pestis YPO2246 membrane protein (100% evalue=1.E-102); Escherichia coli JW1619 ydgQ; Hypothetical protein (88.5% evalue=7.E-93); Na(+)-translocating NADH-quinone reductase subunit E 2547721 2954118 YPTB2167 Yersinia pseudotuberculosis IP 32953 Na(+)-translocating NADH-quinone reductase subunit E YP_070684.1 2547140 R 273123 CDS YP_070685.1 51596494 2954119 complement(2547849..2548292) 1 NC_006155.1 similar to Yersinia pestis YPO2247 membrane protein (100% evalue=3.E-80); Salmonella typhimurium STM1460 ydgK; inner membrane protein (56.2% evalue=2.E-37); hypothetical protein 2548292 2954119 YPTB2168 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070685.1 2547849 R 273123 CDS YP_070686.1 51596495 2954120 2548767..2550914 1 NC_006155.1 similar to Xylella fastidiosa XF2397 toxin secretion ABC transporter ATP-binding protein (44.7% evalue=1.E-155); Vibrio cholerae VC1448 RTX toxin transporter (49.6% evalue=0); toxin ABC transporter ATP-binding/permease 2550914 2954120 YPTB2169 Yersinia pseudotuberculosis IP 32953 toxin ABC transporter ATP-binding/permease YP_070686.1 2548767 D 273123 CDS YP_070687.1 51596496 2954121 2550979..2552349 1 NC_006155.1 similar to Xylella fastidiosa XF2398 hemolysin secretion protein D (39.2% evalue=2.E-80); Vibrio cholerae VC1447 RTX toxin transporter (39.3% evalue=2.E-85); RTX toxin ABC transporter 2552349 2954121 YPTB2170 Yersinia pseudotuberculosis IP 32953 RTX toxin ABC transporter YP_070687.1 2550979 D 273123 CDS YP_070688.1 51596497 2954122 2552351..2554489 1 NC_006155.1 similar to Yersinia pestis YPO2252 toxin transport protein (99.4% evalue=0); Vibrio cholerae VC1446 toxin secretion transporter, (52.2% evalue=0); toxin ABC transporter ATP-binding/permease 2554489 2954122 YPTB2171 Yersinia pseudotuberculosis IP 32953 toxin ABC transporter ATP-binding/permease YP_070688.1 2552351 D 273123 CDS YP_070689.1 51596498 2955202 complement(2554731..2556233) 1 NC_006155.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2556233 araA 2955202 araA Yersinia pseudotuberculosis IP 32953 L-arabinose isomerase YP_070689.1 2554731 R 273123 CDS YP_070690.1 51596499 2955203 complement(2556317..2558020) 1 NC_006155.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2558020 araB 2955203 araB Yersinia pseudotuberculosis IP 32953 ribulokinase YP_070690.1 2556317 R 273123 CDS YP_070691.1 51596500 2955207 2558427..2559410 1 NC_006155.1 similar to Yersinia pestis YPO2255 araF; L-arabinose-binding periplasmic protein precursor (99.6% evalue=0); Escherichia coli b1901 araF; L-arabinose transport system substrate-binding protein (87.4% evalue=1.E-163); L-arabinose-ABC transporter substrate-binding protein araF 2559410 araF 2955207 araF Yersinia pseudotuberculosis IP 32953 L-arabinose-ABC transporter substrate-binding protein araF YP_070691.1 2558427 D 273123 CDS YP_070692.2 161760574 2955208 2559508..2561079 1 NC_006155.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2561079 araG 2955208 araG Yersinia pseudotuberculosis IP 32953 L-arabinose transporter ATP-binding protein YP_070692.2 2559508 D 273123 CDS YP_070693.1 51596502 2955209 2561097..2562146 1 NC_006155.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2562146 araH 2955209 araH Yersinia pseudotuberculosis IP 32953 L-arabinose transporter permease YP_070693.1 2561097 D 273123 CDS YP_070694.1 51596503 2955204 2562367..2563299 1 NC_006155.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 2563299 araC 2955204 araC Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator AraC YP_070694.1 2562367 D 273123 CDS YP_070695.1 51596504 2954123 2563427..2564476 1 NC_006155.1 similar to Yersinia pestis YPO2259 oxidoreductase (100% evalue=0); Salmonella typhi STY1660 oxidoreductase (72.5% evalue=1.E-147); oxidoreductase 2564476 2954123 YPTB2178 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_070695.1 2563427 D 273123 CDS YP_070696.1 51596505 2954124 2564670..2565698 1 NC_006155.1 similar to Yersinia pestis YPO2260 membrane protein (99.4% evalue=0); Escherichia coli Z3675 yfeH; cytochrome oxidase (65% evalue=1.E-112); hypothetical protein 2565698 2954124 YPTB2179 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070696.1 2564670 D 273123 CDS YP_070697.1 51596506 2955173 complement(2565873..2566877) 1 NC_006155.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 2566877 add 2955173 add Yersinia pseudotuberculosis IP 32953 adenosine deaminase YP_070697.1 2565873 R 273123 CDS YP_070698.1 51596507 2954125 2567266..2568522 1 NC_006155.1 hypothetical protein 2568522 2954125 YPTB2181 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070698.1 2567266 D 273123 CDS YP_070699.1 51596508 2954126 complement(2568695..2569624) 1 NC_006155.1 similar to Pasteurella multocida PM0373 unknown (54.9% evalue=4.E-86); Listeria monocytogenes lmo0737 lmo0737 (34.1% evalue=8.E-36); hypothetical protein 2569624 2954126 YPTB2182 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070699.1 2568695 R 273123 CDS YP_070700.1 51596509 2954127 2569923..2570747 1 NC_006155.1 similar to Pseudomonas aeruginosa PA3757 probable transcriptional regulator (38.3% evalue=3.E-34); D. radiodurans DRA0211 transcriptional regulator, GntR family (34.9% evalue=1.E-28); transcriptional regulator 2570747 2954127 YPTB2183 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070700.1 2569923 D 273123 CDS YP_070701.1 51596510 2954128 complement(2571015..2572559) 1 NC_006155.1 similar to Yersinia pestis YPO2262 exported protein (99.8% evalue=0); Salmonella typhimurium STM1466 ydgA; periplasmic protein (43.2% evalue=1.E-111); hypothetical protein 2572559 2954128 YPTB2184 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070701.1 2571015 R 273123 CDS YP_070702.1 51596511 2955993 complement(2572799..2573974) 1 NC_006155.1 similar to Yersinia pestis YPO2263 manA, pmi; mannose-6-phosphate isomerase (99.2% evalue=0); Escherichia coli ECs2319 mannose-6-phosphate isomerase (71.4% evalue=1.E-156); mannose-6-phosphate isomerase 2573974 manA 2955993 manA Yersinia pseudotuberculosis IP 32953 mannose-6-phosphate isomerase YP_070702.1 2572799 R 273123 CDS YP_070703.1 51596512 2955665 2574258..2575655 1 NC_006155.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2575655 fumC 2955665 fumC Yersinia pseudotuberculosis IP 32953 fumarate hydratase YP_070703.1 2574258 D 273123 CDS YP_070704.1 51596513 2956844 complement(2575735..2576670) 1 NC_006155.1 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 2576670 tus 2956844 tus Yersinia pseudotuberculosis IP 32953 DNA replication terminus site-binding protein YP_070704.1 2575735 R 273123 CDS YP_070705.1 51596514 2954129 complement(2576875..2578173) 1 NC_006155.1 similar to Yersinia pestis YPO2266 membrane protein (99.1% evalue=0); Escherichia coli JW1588 ynfM; Hypothetical transcriptional regulator (69.3% evalue=1.E-160); MFS multidrug efflux pump 2578173 2954129 YPTB2188 Yersinia pseudotuberculosis IP 32953 MFS multidrug efflux pump YP_070705.1 2576875 R 273123 CDS YP_070706.1 51596515 2957099 2578402..2579316 1 NC_006155.1 similar to Escherichia coli b1595 ynfL; hypothetical transcriptional regulator in MLC-asr intergenic region (59.5% evalue=5.E-92); Escherichia coli JW1587 ynfL; Hypothetical transcriptional regulator (59.5% evalue=5.E-92); hypothetical protein 2579316 ynfL 2957099 ynfL Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070706.1 2578402 D 273123 CDS YP_070707.1 51596516 2956049 2579495..2580712 1 NC_006155.1 similar to Yersinia pestis YPO2268 mlc; ROK family transcriptional regulatory protein (99.5% evalue=0); Escherichia coli JW1586 mlc; Grobal represser of PTS system, Making large colonies protein (73.6% evalue=1.E-171); ROK family transcriptional regulatory protein 2580712 mlc 2956049 mlc Yersinia pseudotuberculosis IP 32953 ROK family transcriptional regulatory protein YP_070707.1 2579495 D 273123 CDS YP_070708.1 51596517 2955289 2580936..2581604 1 NC_006155.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2581604 bioD 2955289 bioD Yersinia pseudotuberculosis IP 32953 dithiobiotin synthetase YP_070708.1 2580936 D 273123 CDS YP_070709.2 161760573 2954130 complement(2581709..2582953) 1 NC_006155.1 similar to Yersinia pestis YPO2270 membrane protein (99.7% evalue=0); Salmonella typhimurium STM1490 chloride channel protein (63.9% evalue=1.E-146); voltage-gated ClC-type chloride channel ClcB 2582953 2954130 YPTB2192 Yersinia pseudotuberculosis IP 32953 voltage-gated ClC-type chloride channel ClcB YP_070709.2 2581709 R 273123 CDS YP_070710.1 51596519 2954131 complement(2583135..2583380) 1 NC_006155.1 similar to Escherichia coli ECs2292 hypothetical protein (56.7% evalue=2.E-18); Escherichia coli Z2573 hypothetical protein (56.7% evalue=2.E-18); hypothetical protein 2583380 2954131 YPTB2193 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070710.1 2583135 R 273123 CDS YP_070711.1 51596520 2954132 complement(2583594..2583968) 1 NC_006155.1 similar to Salmonella typhi STY1560 secreted protein (41.5% evalue=4.E-21); Salmonella typhimurium STM1503 ynfB; periplasmic protein (41.5% evalue=4.E-21); hypothetical protein 2583968 2954132 YPTB2194 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070711.1 2583594 R 273123 CDS YP_070712.1 51596521 2956993 complement(2584195..2584944) 1 NC_006155.1 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase 2584944 ydfG 2956993 ydfG Yersinia pseudotuberculosis IP 32953 3-hydroxy acid dehydrogenase YP_070712.1 2584195 R 273123 CDS YP_070713.1 51596522 2954133 complement(2585058..2586860) 1 NC_006155.1 similar to Ralstonia solanacearum RS00474 probable transcription regulator protein (36.4% evalue=2.E-82); Pseudomonas aeruginosa PA4021 probable transcriptional regulator (35.2% evalue=1.E-78); transcriptional regulator 2586860 2954133 YPTB2196 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070713.1 2585058 R 273123 CDS YP_070714.1 51596523 2954134 2587156..2588676 1 NC_006155.1 similar to Pseudomonas aeruginosa PA4022 probable aldehyde dehydrogenase (79.2% evalue=0); Pseudomonas aeruginosa PA1984 probable aldehyde dehydrogenase (78.6% evalue=0); aldehyde dehydrogenase 2588676 2954134 YPTB2197 Yersinia pseudotuberculosis IP 32953 aldehyde dehydrogenase YP_070714.1 2587156 D 273123 CDS YP_070715.1 51596524 2954135 complement(2588957..2590555) 1 NC_006155.1 hypothetical protein 2590555 2954135 YPTB2198 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070715.1 2588957 R 273123 CDS YP_070716.1 51596525 2954136 2591079..2592002 1 NC_006155.1 similar to Salmonella typhi STY2000 membrane protein (77.5% evalue=1.E-127); Salmonella typhimurium STM1862 pagO; PhoPQ-activated gene; predicted integral membrane protein (76.8% evalue=1.E-126); DMT superfamily metabolite efflux pump 2592002 2954136 YPTB2199 Yersinia pseudotuberculosis IP 32953 DMT superfamily metabolite efflux pump YP_070716.1 2591079 D 273123 CDS YP_070717.1 51596526 2954137 complement(2592808..2593986) 1 NC_006155.1 similar to Salmonella typhi STY1507 aminotransferase (63.8% evalue=1.E-145); Salmonella typhimurium STM1557 aminotransferase (63.3% evalue=1.E-148); aminotransferase 2593986 2954137 YPTB2200 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_070717.1 2592808 R 273123 CDS YP_070718.1 51596527 2954140 complement(2595480..2595950) 1 NC_006155.1 similar to Yersinia pestis YPO2284 hypothetical protein (99.3% evalue=6.E-91); hypothetical protein 2595950 2954140 YPTB2203 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070718.1 2595480 R 273123 CDS YP_070719.1 51596528 2954141 complement(2596094..2597044) 1 NC_006155.1 similar to Yersinia pestis YPO2285 ribose-binding periplasmic protein (partial) (99.5% evalue=1.E-113); Brucella melitensis BMEII0435 D-ribose-binding periplasmic protein precursor (80.6% evalue=1.E-122); ribose/sugar-ABC transporter substrate-binding protein 2597044 2954141 YPTB2204 Yersinia pseudotuberculosis IP 32953 ribose/sugar-ABC transporter substrate-binding protein YP_070719.1 2596094 R 273123 CDS YP_070720.1 51596529 2954142 complement(2597263..2598324) 1 NC_006155.1 similar to Mesorhizobium loti mll7011 ribose ABC transporter, permease (50.3% evalue=3.E-85); Brucella melitensis BMEII0433 ribose transport system permease RbsC (77.4% evalue=1.E-148); sugar/ribose ABC transporter permease 2598324 2954142 YPTB2205 Yersinia pseudotuberculosis IP 32953 sugar/ribose ABC transporter permease YP_070720.1 2597263 R 273123 CDS YP_070721.1 51596530 2954143 complement(2598351..2599889) 1 NC_006155.1 similar to Mesorhizobium loti mll7012 ribose ABC transporter, ATP-binding protein (48.1% evalue=1.E-127); Brucella melitensis BMEII0432 ribose transport ATP-binding protein RbsA (73.2% evalue=0); sugar ABC transporter ATPase 2599889 2954143 YPTB2206 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_070721.1 2598351 R 273123 CDS YP_070722.1 51596531 2954144 complement(2599886..2600539) 1 NC_006155.1 similar to Sinorhizobium meliloti SMb20350 hypothetical protein (30.4% evalue=7.E-13); Brucella melitensis BMEII0431 hypothetical protein (55.3% evalue=2.E-33); hypothetical protein 2600539 2954144 YPTB2207 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070722.1 2599886 R 273123 CDS YP_070723.1 51596532 2954145 2601294..2602325 1 NC_006155.1 similar to Yersinia pestis YPO2286 conserved hypothetical protein (99.7% evalue=0); Clostridium acetobutylicum CAC0106 ABC-type probable sulfate transporter, periplasmic binding protein (24.8% evalue=2.E-14); taurine/sulfonate ABC transporter perplasmic-binding protein 2602325 2954145 YPTB2208 Yersinia pseudotuberculosis IP 32953 taurine/sulfonate ABC transporter perplasmic-binding protein YP_070723.1 2601294 D 273123 CDS YP_070724.1 51596533 2954146 2602329..2603150 1 NC_006155.1 similar to Yersinia pestis YPO2287 transport system permease (100% evalue=1.E-158); Bacillus subtilis BG10657 ssuC, ygaM, yzeB; aliphatic sulfonates transport system permease (36.5% evalue=4.E-45); taurine/sulfonate ABC transporter permease 2603150 2954146 YPTB2209 Yersinia pseudotuberculosis IP 32953 taurine/sulfonate ABC transporter permease YP_070724.1 2602329 D 273123 CDS YP_070725.1 51596534 2956667 2603160..2603978 1 NC_006155.1 similar to Mesorhizobium loti mll1253 ATP-binding protein of ABC transporter (45.1% evalue=3.E-62); Methanocaldococcus jannaschii MJ0412 tauB; taurine transport system ATP-binding protein (48.3% evalue=1.E-65); taurine/sulfonates ABC transporter ATP-binding protein 2603978 tauB 2956667 tauB Yersinia pseudotuberculosis IP 32953 taurine/sulfonates ABC transporter ATP-binding protein YP_070725.1 2603160 D 273123 CDS YP_070726.1 51596535 2955188 complement(2604403..2605893) 1 NC_006155.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 2605893 amn 2955188 amn Yersinia pseudotuberculosis IP 32953 AMP nucleosidase YP_070726.1 2604403 R 273123 CDS YP_070727.1 51596536 2954147 2606099..2607547 1 NC_006155.1 similar to Yersinia pestis YPO2289 virulence factor (97.6% evalue=0); Salmonella typhimurium STM1593 srfA; ssrAB activated gene (37.8% evalue=4.E-85); virulence factor 2607547 2954147 YPTB2212 Yersinia pseudotuberculosis IP 32953 virulence factor YP_070727.1 2606099 D 273123 CDS YP_070728.1 51596537 2954148 2607552..2610605 1 NC_006155.1 similar to Yersinia pestis YPO2290 virulence factor (99.1% evalue=0); Salmonella typhimurium STM1594 srfB; ssrAB activated gene (56.8% evalue=0); virulence factor 2610605 2954148 YPTB2213 Yersinia pseudotuberculosis IP 32953 virulence factor YP_070728.1 2607552 D 273123 CDS YP_070729.1 51596538 2954149 2610602..2613142 1 NC_006155.1 similar to Yersinia pestis YPO2291 virulence factor (98.5% evalue=0); Pasteurella multocida PM1820 unknown (39.5% evalue=3.E-84); virulence factor 2613142 2954149 YPTB2214 Yersinia pseudotuberculosis IP 32953 virulence factor YP_070729.1 2610602 D 273123 CDS YP_070730.1 51596539 2954150 complement(2613311..2614105) 1 NC_006155.1 similar to Yersinia pestis YPO2292 lipoprotein (98.8% evalue=1.E-146); Salmonella typhimurium STM3036 inner membrane protein (45.1% evalue=5.E-61); lipoprotein 2614105 2954150 YPTB2215 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070730.1 2613311 R 273123 CDS YP_070731.1 51596540 2955871 2614891..2616558 1 NC_006155.1 catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase catalytic subunit 2616558 ilvB 2955871 ilvB Yersinia pseudotuberculosis IP 32953 acetolactate synthase catalytic subunit YP_070731.1 2614891 D 273123 CDS YP_070732.1 51596541 2955879 2616560..2616907 1 NC_006155.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 2616907 ilvN 2955879 ilvN Yersinia pseudotuberculosis IP 32953 acetolactate synthase 1 regulatory subunit YP_070732.1 2616560 D 273123 CDS YP_070733.1 51596542 2954151 complement(2616974..2617648) 1 NC_006155.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase 2617648 2954151 YPTB2218 Yersinia pseudotuberculosis IP 32953 nucleotidase YP_070733.1 2616974 R 273123 CDS YP_070734.1 51596543 2954152 complement(2617779..2620175) 1 NC_006155.1 similar to Yersinia pestis YPO2297 membrane protein (99% evalue=0); hypothetical protein 2620175 2954152 YPTB2219 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070734.1 2617779 R 273123 CDS YP_070735.1 51596544 2956265 complement(2620721..2622166) 1 NC_006155.1 similar to Yersinia pestis YPO2298 phoA; alkaline phosphatase precursor (100% evalue=0); Escherichia coli Z0479 phoA; alkaline phosphatase (74.3% evalue=0); alkaline phosphatase 2622166 phoA 2956265 phoA Yersinia pseudotuberculosis IP 32953 alkaline phosphatase YP_070735.1 2620721 R 273123 CDS YP_070736.1 51596545 2956187 2622424..2622942 1 NC_006155.1 similar to Yersinia pestis YPO2299 ogt; methylated-DNA--protein-cysteine methyltransferase (100% evalue=1.E-97); Escherichia coli Z2432 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase (59.1% evalue=5.E-55); methylated-DNA--protein-cysteine methyltransferase 2622942 ogt 2956187 ogt Yersinia pseudotuberculosis IP 32953 methylated-DNA--protein-cysteine methyltransferase YP_070736.1 2622424 D 273123 CDS YP_070737.1 51596546 2955628 2623015..2623767 1 NC_006155.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2623767 fnr 2955628 fnr Yersinia pseudotuberculosis IP 32953 fumarate/nitrate reduction transcriptional regulator YP_070737.1 2623015 D 273123 CDS YP_070738.1 51596547 2954153 2623902..2624858 1 NC_006155.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2624858 2954153 YPTB2223 Yersinia pseudotuberculosis IP 32953 universal stress protein UspE YP_070738.1 2623902 D 273123 CDS YP_070739.1 51596548 2956292 complement(2625134..2626528) 1 NC_006155.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 2626528 pntB 2956292 pntB Yersinia pseudotuberculosis IP 32953 pyridine nucleotide transhydrogenase YP_070739.1 2625134 R 273123 CDS YP_070740.1 51596549 2956291 complement(2626601..2628127) 1 NC_006155.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2628127 pntA 2956291 pntA Yersinia pseudotuberculosis IP 32953 NAD(P) transhydrogenase subunit alpha YP_070740.1 2626601 R 273123 CDS YP_070741.1 51596550 2954154 complement(2628248..2628451) 1 NC_006155.1 similar to Yersinia pestis YPO2304 hypothetical protein, 99% identical.; hypothetical protein 2628451 2954154 YPTB2226 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070741.1 2628248 R 273123 CDS YP_070742.1 51596551 2954155 2628657..2629610 1 NC_006155.1 similar to Yersinia pestis YPO2305 exported protein (100% evalue=1.E-178); Escherichia coli Z2603 hypothetical protein (70.3% evalue=1.E-124); hypothetical protein 2629610 2954155 YPTB2227 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070742.1 2628657 D 273123 CDS YP_070743.1 51596552 2954156 2629880..2631271 1 NC_006155.1 similar to Yersinia pestis YPO2306 amino acid antiporter (99.7% evalue=0); Escherichia coli JW1597 arcD; arginine/ornithine antiporter (74.8% evalue=0); APC family arginine/ornithine antiporter 2631271 2954156 YPTB2228 Yersinia pseudotuberculosis IP 32953 APC family arginine/ornithine antiporter YP_070743.1 2629880 D 273123 CDS YP_070744.1 51596553 2954157 complement(2631295..2631711) 1 NC_006155.1 similar to Yersinia pestis YPO2307 conserved hypothetical protein (100% evalue=5.E-74); Vibrio cholerae VC1189 hypothetical protein (41.7% evalue=2.E-21); hypothetical protein 2631711 2954157 YPTB2229 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070744.1 2631295 R 273123 CDS YP_070745.1 51596554 2956558 2632008..2632754 1 NC_006155.1 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2632754 rstA 2956558 rstA Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator RstA YP_070745.1 2632008 D 273123 CDS YP_070746.1 51596555 2956559 2632754..2634058 1 NC_006155.1 similar to Yersinia pestis YPO2309 rstB, uspT; two-component regulatory system, sensor kinase (99.2% evalue=0); Salmonella typhimurium STM1471 rstB; sensory histidine kinase in two-component regulatory system with RstA (70% evalue=1.E-171); sensor protein RstB 2634058 rstB 2956559 rstB Yersinia pseudotuberculosis IP 32953 sensor protein RstB YP_070746.1 2632754 D 273123 CDS YP_070747.1 51596556 2954158 2634136..2635635 1 NC_006155.1 similar to Yersinia pestis YPO2310 carboxypeptidase (99.3% evalue=0); Vibrio cholerae VC1414 thermostable carboxypeptidase 1 (55.8% evalue=1.E-159); carboxypeptidase 2635635 2954158 YPTB2232 Yersinia pseudotuberculosis IP 32953 carboxypeptidase YP_070747.1 2634136 D 273123 CDS YP_070748.1 51596557 2954159 2636474..2639458 1 NC_006155.1 similar to Yersinia pestis YPO2380 sepC; insecticial toxin (72.3% evalue=0); insecticidal toxin complex 2639458 2954159 YPTB2233 Yersinia pseudotuberculosis IP 32953 insecticidal toxin complex YP_070748.1 2636474 D 273123 CDS YP_070749.1 51596558 2954160 complement(2640100..2640678) 1 NC_006155.1 similar to Yersinia pestis YPO2315 exported protein (100% evalue=1.E-108); Salmonella typhi STY1194 exported protein (80.1% evalue=5.E-87); hypothetical protein 2640678 2954160 YPTB2234 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070749.1 2640100 R 273123 CDS YP_070750.1 51596559 2954161 complement(2640704..2641258) 1 NC_006155.1 similar to Yersinia pestis YPO2316 membrane protein (100% evalue=1.E-104); Salmonella typhimurium STM1158 inner membrane protein (62.6% evalue=4.E-68); hypothetical protein 2641258 2954161 YPTB2235 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070750.1 2640704 R 273123 CDS YP_070751.1 51596560 2954162 2641653..2641865 1 NC_006155.1 similar to Yersinia pestis YPO2317 hypothetical protein, 100% identical.; hypothetical protein 2641865 2954162 YPTB2236 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070751.1 2641653 D 273123 CDS YP_070752.1 51596561 2954163 2641862..2642158 1 NC_006155.1 similar to Yersinia pestis YPO2318 acid shock protein, 93% identical; acid shock protein 2642158 2954163 YPTB2237 Yersinia pseudotuberculosis IP 32953 acid shock protein YP_070752.1 2641862 D 273123 CDS YP_070753.1 51596562 2954164 2642492..2643334 1 NC_006155.1 similar to Yersinia pestis YPO2319 pepetidase (98.5% evalue=1.E-156); Escherichia coli JW1590 hypothetical protein (61.8% evalue=1.E-87); pepetidase 2643334 2954164 YPTB2238 Yersinia pseudotuberculosis IP 32953 pepetidase YP_070753.1 2642492 D 273123 CDS YP_070754.1 51596563 2954165 complement(2643390..2643713) 1 NC_006155.1 similar to Yersinia pestis YPO3485 transcriptional regulatory protein (38.6% evalue=5.E-08); DNA-binding phage-related protein 2643713 2954165 YPTB2239 Yersinia pseudotuberculosis IP 32953 DNA-binding phage-related protein YP_070754.1 2643390 R 273123 CDS YP_070755.1 51596564 2954166 complement(2643710..2644081) 1 NC_006155.1 similar to Yersinia pestis YPO2321 phage protein (99% evalue=1.E-53); hypothetical protein 2644081 2954166 YPTB2240 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070755.1 2643710 R 273123 CDS YP_070756.2 161760572 2955835 complement(2644378..2648220) 1 NC_006155.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 2648220 hrpA 2955835 hrpA Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase HrpA YP_070756.2 2644378 R 273123 CDS YP_070757.1 51596566 2955167 2648710..2649315 1 NC_006155.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2649315 acpD 2955167 acpD Yersinia pseudotuberculosis IP 32953 azoreductase YP_070757.1 2648710 D 273123 CDS YP_070758.1 51596567 2954167 complement(2649436..2650392) 1 NC_006155.1 similar to Yersinia pestis YPO2324 transcriptional regulatory protein (100% evalue=0); Ralstonia solanacearum RS01477 dalR, RSc2127; transcriptional regulator (repressor) transcription regulator protein (53.3% evalue=3.E-90); transcriptional regulator 2650392 2954167 YPTB2243 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_070758.1 2649436 R 273123 CDS YP_070759.1 51596568 2955423 2650602..2651993 1 NC_006155.1 similar to Yersinia pestis YPO2325 dalD; D-arabinitol 4-dehydrogenase (99.5% evalue=0); Ralstonia solanacearum RS01475 dalD, RSc2129; D-arabinitol dehydrogenase oxidoreductase (59.3% evalue=1.E-153); mannitol dehydrogenase 2651993 dalD 2955423 dalD Yersinia pseudotuberculosis IP 32953 mannitol dehydrogenase YP_070759.1 2650602 D 273123 CDS YP_070760.1 51596569 2954168 complement(2652175..2652546) 1 NC_006155.1 similar to Yersinia pestis YPO2326 exported protein (100% evalue=9.E-65); Salmonella typhimurium STM1644 ydbL; periplasmic protein (60% evalue=6.E-27); hypothetical protein 2652546 2954168 YPTB2245 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070760.1 2652175 R 273123 CDS YP_070761.1 51596570 2954169 complement(2652556..2652750) 1 NC_006155.1 similar to Yersinia pestis YPO2327 lipoprotein (98.3% evalue=3.E-27); Salmonella typhi STY1424 lipoprotein (68.5% evalue=1.E-13); lipoprotein 2652750 2954169 YPTB2246 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070761.1 2652556 R 273123 CDS YP_070762.1 51596571 2954170 complement(2652747..2655443) 1 NC_006155.1 similar to Yersinia pestis YPO2328 membrane protein (99.7% evalue=0); Escherichia coli b1381 ydbH; hypothetical 96.8 kD protein in ldhA-tynA intergenic region (46.5% evalue=0); hypothetical protein 2655443 2954170 YPTB2247 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070762.1 2652747 R 273123 CDS YP_070763.1 51596572 2955935 2655709..2656701 1 NC_006155.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 2656701 ldhA 2955935 ldhA Yersinia pseudotuberculosis IP 32953 D-lactate dehydrogenase YP_070763.1 2655709 D 273123 CDS YP_070764.1 51596573 2955839 2656771..2657223 1 NC_006155.1 similar to Yersinia pestis YPO2330 hslJ; heat shock protein (100% evalue=3.E-84); Escherichia coli Z2330 hslJ; heat shock protein hslJ (44.7% evalue=1.E-27); heat-inducible protein 2657223 hslJ 2955839 hslJ Yersinia pseudotuberculosis IP 32953 heat-inducible protein YP_070764.1 2656771 D 273123 CDS YP_070765.1 51596574 2954171 complement(2657281..2657694) 1 NC_006155.1 similar to Yersinia pestis YPO2331 lipoprotein (99.1% evalue=5.E-61); Escherichia coli JW1373 ydbJ; Hypothetical protein (56.2% evalue=5.E-10); lipoprotein 2657694 2954171 YPTB2250 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070765.1 2657281 R 273123 CDS YP_070766.1 51596575 2956039 2657907..2658566 1 NC_006155.1 inner membrane protein involved in cell density-dependent acid resistance; part of the acid fitness island (AFI) of E. coli; Mg(2+) transport ATPase 2658566 mgtC2 2956039 mgtC2 Yersinia pseudotuberculosis IP 32953 Mg(2+) transport ATPase YP_070766.1 2657907 D 273123 CDS YP_070767.1 51596576 2956394 complement(2658626..2658964) 1 NC_006155.1 similar to Yersinia pestis YPO2333 qacE; quaternary ammonium compound-resistance protein (100% evalue=1.E-56); Brucella melitensis BMEI1045 quateRNAry ammonium compound-resistance protein qacE (55.4% evalue=3.E-30); DMT superfamily multiple drug efflux pump 2658964 qacE 2956394 qacE Yersinia pseudotuberculosis IP 32953 DMT superfamily multiple drug efflux pump YP_070767.1 2658626 R 273123 CDS YP_070768.1 51596577 2956140 2659437..2662970 1 NC_006155.1 similar to Yersinia pestis YPO2334 nifJ; pyruvate-flavodoxin oxidoreductase (99.9% evalue=0); Escherichia coli b1378 ydbK; pyruvate ferredoxin oxidoreductase (80.5% evalue=0); pyruvate-flavodoxin oxidoreductase 2662970 nifJ 2956140 nifJ Yersinia pseudotuberculosis IP 32953 pyruvate-flavodoxin oxidoreductase YP_070768.1 2659437 D 273123 CDS YP_070769.1 51596578 2954172 2663245..2664186 1 NC_006155.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2664186 2954172 YPTB2254 Yersinia pseudotuberculosis IP 32953 C32 tRNA thiolase YP_070769.1 2663245 D 273123 CDS YP_070770.1 51596579 2954173 2664457..2665461 1 NC_006155.1 similar to Yersinia pestis YPO2336 exported protein (100% evalue=0); Mycobacterium tuberculosis_CDC1551MT2559 carboxylesterase family protein (35.5% evalue=8.E-27); hypothetical protein 2665461 2954173 YPTB2255 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070770.1 2664457 D 273123 CDS YP_070771.1 51596580 2954174 2665773..2666612 1 NC_006155.1 similar to Yersinia pestis YPO2337 regulatory protein (99.2% evalue=1.E-163); regulatory protein 2666612 2954174 YPTB2256 Yersinia pseudotuberculosis IP 32953 regulatory protein YP_070771.1 2665773 D 273123 CDS YP_070772.1 51596581 2957125 complement(2666986..2667969) 1 NC_006155.1 similar to Yersinia pestis YPO2338 CorA-like Mg2+ transporter protein (99.6% evalue=0); Escherichia coli JW1336 hypothetical protein (64.8% evalue=1.E-125); Citation: Worlock and Smith (2002) J. Bacteriol. 184:4369-4373; zinc transporter 2667969 zntB 2957125 zntB Yersinia pseudotuberculosis IP 32953 zinc transporter YP_070772.1 2666986 R 273123 CDS YP_070773.1 51596582 2956073 complement(2668212..2669828) 1 NC_006155.1 similar to Yersinia pestis YPO2339 mppA; periplasmic murein peptide-binding protein (100% evalue=0); Escherichia coli b1329 oligopeptide transport system substrate-binding protein (70.5% evalue=0); murein peptide-ABC transporter substrate-binding protein 2669828 mppA 2956073 mppA Yersinia pseudotuberculosis IP 32953 murein peptide-ABC transporter substrate-binding protein YP_070773.1 2668212 R 273123 CDS YP_070774.1 51596583 2954175 2670206..2670976 1 NC_006155.1 similar to Yersinia pestis YPO2340 conserved hypothetical protein (99.6% evalue=1.E-145); Escherichia coli b1326 ycjI; hypothetical 28.8 kD protein in tpx-fnr itergenic region (70.5% evalue=6.E-92); murein peptide amidase A 2670976 2954175 YPTB2259 Yersinia pseudotuberculosis IP 32953 murein peptide amidase A YP_070774.1 2670206 D 273123 CDS YP_070775.1 51596584 2954176 complement(2671018..2671992) 1 NC_006155.1 similar to Yersinia pestis YPO2341 mandelate racemase / muconate lactonizing protein (100% evalue=0); Salmonella typhimurium STM1681 ycjG; chloromuconate cycloisomerase (muconate cycloisomerase) (68.2% evalue=1.E-123); mandelate racemase 2671992 2954176 YPTB2260 Yersinia pseudotuberculosis IP 32953 mandelate racemase YP_070775.1 2671018 R 273123 CDS YP_070776.1 51596585 2956727 2672155..2672658 1 NC_006155.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2672658 tpx 2956727 tpx Yersinia pseudotuberculosis IP 32953 thiol peroxidase YP_070776.1 2672155 D 273123 CDS YP_070777.1 51596586 2956848 complement(2672822..2674399) 1 NC_006155.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 2674399 tyrR 2956848 tyrR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator TyrR YP_070777.1 2672822 R 273123 CDS YP_070778.1 51596587 2954177 2674736..2675182 1 NC_006155.1 similar to Yersinia pestis YPO2345 conserved hypothetical protein (100% evalue=2.E-81); hypothetical protein 2675182 2954177 YPTB2263 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070778.1 2674736 D 273123 CDS YP_070779.1 51596588 2954178 2675261..2675719 1 NC_006155.1 similar to Yersinia pestis YPO2346 conserved hypothetical protein (99.3% evalue=1.E-84); Mesorhizobium loti mlr9079 hypothetical protein (34.4% evalue=9.E-08); hypothetical protein 2675719 2954178 YPTB2264 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070779.1 2675261 D 273123 CDS YP_070780.1 51596589 2954179 complement(2675729..2676790) 1 NC_006155.1 similar to Yersinia pestis YPO2347 membrane protein (100% evalue=0); Escherichia coli ECs1901 hypothetical protein (74.3% evalue=1.E-146); hypothetical protein 2676790 2954179 YPTB2265 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070780.1 2675729 R 273123 CDS YP_070781.1 51596590 2954180 complement(2676787..2678184) 1 NC_006155.1 similar to Yersinia pestis YPO2348 conserved hypothetical protein (100% evalue=0); Escherichia coli Z2458 ycjX; EC 2.1 enzymes (80.6% evalue=0); hypothetical protein 2678184 2954180 YPTB2266 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070781.1 2676787 R 273123 CDS YP_070782.1 51596591 2956344 complement(2678165..2678407) 1 NC_006155.1 peripheral inner membrane phage-shock protein 2678407 pspD 2956344 pspD Yersinia pseudotuberculosis IP 32953 peripheral inner membrane phage-shock protein YP_070782.1 2678165 R 273123 CDS YP_070783.1 51596592 2956343 complement(2678492..2678851) 1 NC_006155.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC 2678851 pspC 2956343 pspC Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional activator PspC YP_070783.1 2678492 R 273123 CDS YP_070784.1 51596593 2956342 complement(2678851..2679078) 1 NC_006155.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 2679078 pspB 2956342 pspB Yersinia pseudotuberculosis IP 32953 phage shock protein B YP_070784.1 2678851 R 273123 CDS YP_070785.1 51596594 2956341 complement(2679240..2679905) 1 NC_006155.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 2679905 pspA 2956341 pspA Yersinia pseudotuberculosis IP 32953 phage shock protein PspA YP_070785.1 2679240 R 273123 CDS YP_070786.1 51596595 2956345 2680150..2681178 1 NC_006155.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2681178 pspF 2956345 pspF Yersinia pseudotuberculosis IP 32953 phage shock protein operon transcriptional activator YP_070786.1 2680150 D 273123 CDS YP_070787.1 51596596 2956566 2681777..2683420 1 NC_006155.1 similar to Yersinia pestis YPO2355 sapA; peptide transport periplasmic protein precursor (99.8% evalue=0); Escherichia coli b1294 sapA; peptide transport system substrate-binding protein (76.2% evalue=0); peptide ABC transporter substrate-binding protein sapA 2683420 sapA 2956566 sapA Yersinia pseudotuberculosis IP 32953 peptide ABC transporter substrate-binding protein sapA YP_070787.1 2681777 D 273123 CDS YP_070788.1 51596597 2956567 2683417..2684382 1 NC_006155.1 similar to Yersinia pestis YPO2356 sapB; peptide transport system permease (100% evalue=1.E-180); Escherichia coli b1293 sapB; peptide transport system permease (76.9% evalue=1.E-146); peptide ABC transporter permease SapB 2684382 sapB 2956567 sapB Yersinia pseudotuberculosis IP 32953 peptide ABC transporter permease SapB YP_070788.1 2683417 D 273123 CDS YP_070789.1 51596598 2956568 2684369..2685259 1 NC_006155.1 similar to Yersinia pestis YPO2357 sapC; peptide transport system permease (100% evalue=1.E-164); Escherichia coli b1292 sapC; peptide transport system permease (77% evalue=1.E-128); peptide ABC transporter permease SapC 2685259 sapC 2956568 sapC Yersinia pseudotuberculosis IP 32953 peptide ABC transporter permease SapC YP_070789.1 2684369 D 273123 CDS YP_070790.1 51596599 2956569 2685259..2686251 1 NC_006155.1 similar to Yersinia pestis YPO2358 sapD; peptide transport system ATP-binding protein (100% evalue=0); Salmonella typhi STY1356 sapD; peptide transport system ATP-binding protein SapD (81.8% evalue=1.E-164); peptide ABC transporter ATP-binding protein SapD 2686251 sapD 2956569 sapD Yersinia pseudotuberculosis IP 32953 peptide ABC transporter ATP-binding protein SapD YP_070790.1 2685259 D 273123 CDS YP_070791.1 51596600 2956570 2686251..2687066 1 NC_006155.1 similar to Yersinia pestis YPO2359 sapF; peptide transport system ATP-binding protein (100% evalue=1.E-150); Escherichia coli JW1283 sapF; Peptide transport system ATP-binding protein (82.3% evalue=1.E-124); peptide ABC transporter ATP-binding protein SapF 2687066 sapF 2956570 sapF Yersinia pseudotuberculosis IP 32953 peptide ABC transporter ATP-binding protein SapF YP_070791.1 2686251 D 273123 CDS YP_070792.1 51596601 2954181 2687457..2688737 1 NC_006155.1 similar to Yersinia pestis YPO2360 conserved hypothetical protein (100% evalue=0); Escherichia coli b1287 yciW; hypothetical 45.1 kD protein in rnb-fabI intergenic region (37.8% evalue=6.E-49); hypothetical protein 2688737 2954181 YPTB2277 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070792.1 2687457 D 273123 CDS YP_070793.1 51596602 2954182 2689380..2690885 1 NC_006155.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease 2690885 tppB 2954182 tppB Yersinia pseudotuberculosis IP 32953 tripeptide transporter permease YP_070793.1 2689380 D 273123 CDS YP_070794.1 51596603 2954183 2691141..2691731 1 NC_006155.1 similar to Yersinia pestis YPO2362 membrane protein (100% evalue=1.E-110); Salmonella typhimurium STM2169 yohC; paral transport protein (65.4% evalue=1.E-73); hypothetical protein 2691731 2954183 YPTB2279 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070794.1 2691141 D 273123 CDS YP_070795.1 51596604 2954184 2691977..2692240 1 NC_006155.1 similar to Yersinia pestis YPO2363 conserved hypothetical protein (100% evalue=1.E-42); Salmonella typhimurium STM4194 yjbD; cytoplasmic protein (53.4% evalue=3.E-16); hypothetical protein 2692240 2954184 YPTB2280 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070795.1 2691977 D 273123 CDS YP_070796.1 51596605 2955761 2692485..2693090 1 NC_006155.1 similar to Yersinia pestis YPO2367 gst; glutathione S-transferase (100% evalue=1.E-111); Salmonella typhi STY1671 gst; glutathione S-transferase (61.5% evalue=7.E-71); glutathionine S-transferase 2693090 gst 2955761 gst Yersinia pseudotuberculosis IP 32953 glutathionine S-transferase YP_070796.1 2692485 D 273123 CDS YP_070797.1 51596606 2956226 complement(2693150..2694010) 1 NC_006155.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2694010 pdxY 2956226 pdxY Yersinia pseudotuberculosis IP 32953 pyridoxamine kinase YP_070797.1 2693150 R 273123 CDS YP_070798.1 51596607 2956849 complement(2694165..2695439) 1 NC_006155.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2695439 tyrS 2956849 tyrS Yersinia pseudotuberculosis IP 32953 tyrosyl-tRNA synthetase YP_070798.1 2694165 R 273123 CDS YP_070799.1 51596608 2956224 complement(2695621..2696274) 1 NC_006155.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 2696274 pdxH 2956224 pdxH Yersinia pseudotuberculosis IP 32953 pyridoxamine 5'-phosphate oxidase YP_070799.1 2695621 R 273123 CDS YP_070800.1 51596609 2954185 complement(2696365..2696679) 1 NC_006155.1 similar to Yersinia pestis YPO2371 lipoprotein (100% evalue=2.E-55); Salmonella typhimurium STM1447 ydhA; outer membrane lipoprotein (44.1% evalue=2.E-20); lipoprotein 2696679 2954185 YPTB2285 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070800.1 2696365 R 273123 CDS YP_070801.1 51596610 2954186 complement(2696737..2697849) 1 NC_006155.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2697849 anmK 2954186 anmK Yersinia pseudotuberculosis IP 32953 anhydro-N-acetylmuramic acid kinase YP_070801.1 2696737 R 273123 CDS YP_070802.1 51596611 2956610 2698405..2698872 1 NC_006155.1 similar to Yersinia pestis YPO2373 slyB, pcpY; lipoprotein (100% evalue=2.E-81); Escherichia coli ECs2350 outer membrane protein (74.8% evalue=6.E-63); lipoprotein 2698872 slyB 2956610 slyB Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070802.1 2698405 D 273123 CDS YP_070803.1 51596612 2956481 complement(2699016..2699447) 1 NC_006155.1 Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 2699447 rovA 2956481 rovA Yersinia pseudotuberculosis IP 32953 transcriptional regulator SlyA YP_070803.1 2699016 R 273123 CDS YP_070804.1 51596613 2954187 complement(2700245..2701141) 1 NC_006155.1 similar to Yersinia pestis YPO2375 aldo/keto reductase (100% evalue=1.E-173); Escherichia coli JW1639 ydhF; Hypothetical oxidoreductase (73.1% evalue=1.E-128); aldo/keto reductase 2701141 2954187 YPTB2289 Yersinia pseudotuberculosis IP 32953 aldo/keto reductase YP_070804.1 2700245 R 273123 CDS YP_070805.1 51596614 2954188 complement(2701273..2701638) 1 NC_006155.1 similar to Yersinia pestis YPO2376 conserved hypothetical protein (100% evalue=2.E-67); Escherichia coli JW1640 ydhL; Hypothetical protein (68.4% evalue=5.E-32); hypothetical protein 2701638 2954188 YPTB2290 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070805.1 2701273 R 273123 CDS YP_070806.1 51596615 2954189 2701686..2703323 1 NC_006155.1 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein 2703323 2954189 YPTB2291 Yersinia pseudotuberculosis IP 32953 cell division protein YP_070806.1 2701686 D 273123 CDS YP_070807.1 51596616 2954190 2703566..2704165 1 NC_006155.1 similar to Yersinia pestis YPO2378 TetR-family transcriptional regulatory protein (100% evalue=1.E-110); Escherichia coli Z2666 hypothetical protein (51.5% evalue=1.E-47); TetR family transcriptional regulator 2704165 2954190 YPTB2292 Yersinia pseudotuberculosis IP 32953 TetR family transcriptional regulator YP_070807.1 2703566 D 273123 CDS YP_070808.1 51596617 2954191 2704253..2705350 1 NC_006155.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 2705350 2954191 YPTB2293 Yersinia pseudotuberculosis IP 32953 N-ethylmaleimide reductase YP_070808.1 2704253 D 273123 CDS YP_070809.1 51596618 2956592 complement(2705571..2708519) 1 NC_006155.1 similar to Yersinia pestis YPO2380 sepC; insecticial toxin (99.4% evalue=0); insecticial toxin 2708519 sepC 2956592 sepC Yersinia pseudotuberculosis IP 32953 insecticial toxin YP_070809.1 2705571 R 273123 CDS YP_070810.1 51596619 2955704 2708792..2709199 1 NC_006155.1 similar to Yersinia pestis YPO2381 gloA; lactoylglutathione lyase (99.2% evalue=5.E-73); Escherichia coli b1651 gloA; lactoylglutathione lyase (80% evalue=9.E-60); lactoylglutathione lyase 2709199 gloA 2955704 gloA Yersinia pseudotuberculosis IP 32953 lactoylglutathione lyase YP_070810.1 2708792 D 273123 CDS YP_070811.1 51596620 2956476 2709311..2709958 1 NC_006155.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2709958 rnt 2956476 rnt Yersinia pseudotuberculosis IP 32953 ribonuclease T YP_070811.1 2709311 D 273123 CDS YP_070812.1 51596621 2954192 complement(2710267..2710617) 1 NC_006155.1 similar to Yersinia pestis YPO2383 conserved hypothetical protein (100% evalue=5.E-64); Salmonella typhi STY1689 ydhD; conserved hypothetical protein (88.6% evalue=5.E-55); hypothetical protein 2710617 2954192 YPTB2297 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070812.1 2710267 R 273123 CDS YP_070813.1 51596622 2954193 2711042..2711908 1 NC_006155.1 similar to Yersinia pestis YPO2385 exported protein (99.3% evalue=1.E-162); Escherichia coli b1655 ydhO; hypothetical 29.9 kD protein in lhr-sodB intergenic region precursor (51.9% evalue=1.E-73); hypothetical protein 2711908 2954193 YPTB2298 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070813.1 2711042 D 273123 CDS YP_070814.1 51596623 2956619 2712269..2712847 1 NC_006155.1 Fe; SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase 2712847 sodB 2956619 sodB Yersinia pseudotuberculosis IP 32953 superoxide dismutase YP_070814.1 2712269 D 273123 CDS YP_070815.1 51596624 2956377 2713374..2714399 1 NC_006155.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 2714399 purR 2956377 purR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor PurR YP_070815.1 2713374 D 273123 CDS YP_070816.1 51596625 2954194 complement(2714488..2715420) 1 NC_006155.1 similar to Yersinia pestis YPO2388 LysR-family transcriptional regulatory protein (99.6% evalue=0); Escherichia coli JW1651 ydhB; Hypothetical protein (70.3% evalue=1.E-128); DNA-binding transcriptional regulator 2715420 2954194 YPTB2301 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_070816.1 2714488 R 273123 CDS YP_070817.1 51596626 2954195 2715710..2716912 1 NC_006155.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2716912 2954195 YPTB2302 Yersinia pseudotuberculosis IP 32953 inner membrane transport protein YdhC YP_070817.1 2715710 D 273123 CDS YP_070818.1 51596627 2955321 2717392..2718543 1 NC_006155.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2718543 cfa 2955321 cfa Yersinia pseudotuberculosis IP 32953 cyclopropane-fatty-acyl-phospholipid synthase YP_070818.1 2717392 D 273123 CDS YP_070819.1 51596628 2956453 complement(2718594..2719250) 1 NC_006155.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2719250 ribE 2956453 ribE Yersinia pseudotuberculosis IP 32953 riboflavin synthase subunit alpha YP_070819.1 2718594 R 273123 CDS YP_070820.1 51596629 2954196 2719499..2720872 1 NC_006155.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2720872 2954196 YPTB2305 Yersinia pseudotuberculosis IP 32953 multidrug efflux protein YP_070820.1 2719499 D 273123 CDS YP_070821.1 51596630 2956383 2722148..2723560 1 NC_006155.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2723560 pykF 2956383 pykF Yersinia pseudotuberculosis IP 32953 pyruvate kinase YP_070821.1 2722148 D 273123 CDS YP_070822.1 51596631 2955965 2723881..2724117 1 NC_006155.1 similar to Yersinia pestis YPO2394 lpp, mlpA; major outer membrane lipoprotein (100% evalue=2.E-36); Salmonella typhimurium STM1377 lpp; murein lipoprotein, links outer and inner membranes (91% evalue=3.E-33); major outer membrane lipoprotein 2724117 lpp 2955965 lpp Yersinia pseudotuberculosis IP 32953 major outer membrane lipoprotein YP_070822.1 2723881 D 273123 CDS YP_070823.1 51596632 2954197 complement(2724478..2725542) 1 NC_006155.1 similar to Escherichia coli ECs1491 hypothetical protein (63.4% evalue=1.E-104); Escherichia coli Z1752 ycfS; orf, hypothetical protein (63.4% evalue=1.E-104); hypothetical protein 2725542 2954197 YPTB2308 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070823.1 2724478 R 273123 CDS YP_070824.1 51596633 2954198 complement(2725813..2726235) 1 NC_006155.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 2726235 2954198 YPTB2309 Yersinia pseudotuberculosis IP 32953 cysteine desufuration protein SufE YP_070824.1 2725813 R 273123 CDS YP_070825.1 51596634 2954199 complement(2726324..2727544) 1 NC_006155.1 catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine; bifunctional cysteine desulfurase/selenocysteine lyase 2727544 2954199 YPTB2310 Yersinia pseudotuberculosis IP 32953 bifunctional cysteine desulfurase/selenocysteine lyase YP_070825.1 2726324 R 273123 CDS YP_070826.1 51596635 2954200 complement(2727541..2728866) 1 NC_006155.1 with SufBC activates cysteine desulfurase SufS; cysteine desulfurase 2728866 2954200 YPTB2311 Yersinia pseudotuberculosis IP 32953 cysteine desulfurase YP_070826.1 2727541 R 273123 CDS YP_070827.1 51596636 2954201 complement(2728841..2729587) 1 NC_006155.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase 2729587 sufC 2954201 sufC Yersinia pseudotuberculosis IP 32953 cysteine desulfurase YP_070827.1 2728841 R 273123 CDS YP_070828.1 51596637 2954202 complement(2729772..2731283) 1 NC_006155.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 2731283 2954202 YPTB2313 Yersinia pseudotuberculosis IP 32953 cysteine desulfurase YP_070828.1 2729772 R 273123 CDS YP_070829.1 51596638 2954203 complement(2731298..2731669) 1 NC_006155.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein 2731669 sufA 2954203 sufA Yersinia pseudotuberculosis IP 32953 iron-sulfur cluster assembly scaffold protein YP_070829.1 2731298 R 273123 CDS YP_070830.1 51596639 2954204 complement(2732264..2732680) 1 NC_006155.1 similar to Yersinia pestis YPO2406 conserved hypothetical protein (100% evalue=1.E-76); Escherichia coli b1686 hypothetical protein (69.8% evalue=1.E-51); hypothetical protein 2732680 2954204 YPTB2315 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070830.1 2732264 R 273123 CDS YP_070831.1 51596640 2954205 complement(2732802..2735858) 1 NC_006155.1 similar to Yersinia pestis YPO2407 conserved hypothetical protein (99.6% evalue=0); Escherichia coli Z2715 ydiJ; oxidase (79% evalue=0); hypothetical protein 2735858 2954205 YPTB2316 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070831.1 2732802 R 273123 CDS YP_070832.1 51596641 2954206 2736496..2737599 1 NC_006155.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; hypothetical protein 2737599 2954206 YPTB2317 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070832.1 2736496 D 273123 CDS YP_070833.1 51596642 2956311 complement(2738236..2740620) 1 NC_006155.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2740620 ppsA 2956311 ppsA Yersinia pseudotuberculosis IP 32953 phosphoenolpyruvate synthase YP_070833.1 2738236 R 273123 CDS YP_070834.1 51596643 2954207 2740995..2741816 1 NC_006155.1 similar to Yersinia pestis YPO2410 Conserved hypothetical protein (99.6% evalue=1.E-152); Escherichia coli Z2732 ydiA; orf, hypothetical protein (80.5% evalue=1.E-123); hypothetical protein 2741816 2954207 YPTB2319 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070834.1 2740995 D 273123 CDS YP_070835.1 51596644 2955227 2741973..2743019 1 NC_006155.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2743019 aroH 2955227 aroH Yersinia pseudotuberculosis IP 32953 phospho-2-dehydro-3-deoxyheptonate aldolase YP_070835.1 2741973 D 273123 CDS YP_070836.1 51596645 2954208 complement(2743188..2744651) 1 NC_006155.1 similar to Escherichia coli b1706 hypothetical protein (64.9% evalue=0); Escherichia coli JW1696 ydiU; Hypothetical protein (64.9% evalue=0); hypothetical protein 2744651 2954208 YPTB2321 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070836.1 2743188 R 273123 CDS YP_070837.1 51596646 2955964 complement(2744703..2745719) 1 NC_006155.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A 2745719 lplA 2955964 lplA Yersinia pseudotuberculosis IP 32953 lipoate-protein ligase A YP_070837.1 2744703 R 273123 CDS YP_070838.1 51596647 2956145 complement(2745844..2746308) 1 NC_006155.1 similar to Yersinia pestis YPO2415 nlpC; lipoprotein (100% evalue=2.E-87); Salmonella typhimurium STM1343 nlpC; lipoprotein (66.6% evalue=2.E-58); lipoprotein 2746308 nlpC 2956145 nlpC Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070838.1 2745844 R 273123 CDS YP_070839.1 51596648 2956287 complement(2746588..2746974) 1 NC_006155.1 similar to Yersinia pestis YPO2416 membrane protein (100% evalue=1.E-69); Pseudomonas aeruginosa PA3558 hypothetical protein (42.9% evalue=2.E-20); hypothetical protein 2746974 pmrM 2956287 pmrM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070839.1 2746588 R 273123 CDS YP_070840.1 51596649 2956286 complement(2746971..2747315) 1 NC_006155.1 similar to Yersinia pestis YPO2417 membrane protein (99.1% evalue=3.E-60); Escherichia coli JW2252 hypothetical protein (51.4% evalue=1.E-22); hypothetical protein 2747315 pmrL 2956286 pmrL Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070840.1 2746971 R 273123 CDS YP_070841.1 51596650 2956285 complement(2747312..2748976) 1 NC_006155.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 2748976 arnT 2956285 arnT Yersinia pseudotuberculosis IP 32953 4-amino-4-deoxy-L-arabinose transferase YP_070841.1 2747312 R 273123 CDS YP_070842.1 51596651 2956284 complement(2748973..2749878) 1 NC_006155.1 similar to Yersinia pestis YPO2419 conserved hypothetical protein (100% evalue=1.E-176); Escherichia coli b2256 hypothetical protein (61.9% evalue=1.E-107); hypothetical protein 2749878 pmrJ 2956284 pmrJ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070842.1 2748973 R 273123 CDS YP_070843.1 51596652 2956283 complement(2749875..2751878) 1 NC_006155.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2751878 pmrI 2956283 pmrI Yersinia pseudotuberculosis IP 32953 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_070843.1 2749875 R 273123 CDS YP_070844.1 51596653 2956281 complement(2751875..2752858) 1 NC_006155.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2752858 pmrF 2956281 pmrF Yersinia pseudotuberculosis IP 32953 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_070844.1 2751875 R 273123 CDS YP_070845.1 51596654 2956282 complement(2752845..2753999) 1 NC_006155.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2753999 pmrH 2956282 pmrH Yersinia pseudotuberculosis IP 32953 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_070845.1 2752845 R 273123 CDS YP_070846.1 51596655 2955299 complement(2754349..2755110) 1 NC_006155.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase 2755110 btuD 2955299 btuD Yersinia pseudotuberculosis IP 32953 vitamin B12-transporter ATPase YP_070846.1 2754349 R 273123 CDS YP_070847.1 51596656 2955300 complement(2755132..2755686) 1 NC_006155.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase 2755686 btuE 2955300 btuE Yersinia pseudotuberculosis IP 32953 glutathione peroxidase YP_070847.1 2755132 R 273123 CDS YP_070848.1 51596657 2955298 complement(2755756..2756763) 1 NC_006155.1 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 2756763 btuC 2955298 btuC Yersinia pseudotuberculosis IP 32953 vtamin B12-transporter permease YP_070848.1 2755756 R 273123 CDS YP_070849.1 51596658 2954209 complement(2756990..2757445) 1 NC_006155.1 similar to Yersinia pestis YPO2981 exported protein (48.7% evalue=2.E-20); hypothetical protein 2757445 2954209 YPTB2334 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070849.1 2756990 R 273123 CDS YP_070850.1 51596659 2955867 complement(2757779..2758075) 1 NC_006155.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2758075 ihfA 2955867 ihfA Yersinia pseudotuberculosis IP 32953 integration host factor subunit alpha YP_070850.1 2757779 R 273123 CDS YP_070851.1 51596660 2956250 complement(2758080..2760467) 1 NC_006155.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2760467 pheT 2956250 pheT Yersinia pseudotuberculosis IP 32953 phenylalanyl-tRNA synthetase subunit beta YP_070851.1 2758080 R 273123 CDS YP_070852.1 51596661 2956249 complement(2760481..2761464) 1 NC_006155.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2761464 pheS 2956249 pheS Yersinia pseudotuberculosis IP 32953 phenylalanyl-tRNA synthetase subunit alpha YP_070852.1 2760481 R 273123 CDS YP_070854.1 51596663 2956504 complement(2761963..2762319) 1 NC_006155.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2762319 rplT 2956504 rplT Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L20 YP_070854.1 2761963 R 273123 CDS YP_070855.1 51596664 2956518 complement(2762357..2762554) 1 NC_006155.1 similar to Yersinia pestis YPO2431 rpmI; 50S ribosomal protein L35 (100% evalue=1.E-31); Salmonella typhimurium STM1335 rpmI; 50S ribosomal subunit protein L35 (89.2% evalue=3.E-28); 50S ribosomal protein L35 2762554 rpmI 2956518 rpmI Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L35 YP_070855.1 2762357 R 273123 CDS YP_070856.1 51596665 2955886 complement(2762651..2763202) 1 NC_006155.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2763202 infC 2955886 infC Yersinia pseudotuberculosis IP 32953 translation initiation factor IF-3 YP_070856.1 2762651 R 273123 CDS YP_070857.1 51596666 2956703 complement(2763206..2765134) 1 NC_006155.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2765134 thrS 2956703 thrS Yersinia pseudotuberculosis IP 32953 threonyl-tRNA synthetase YP_070857.1 2763206 R 273123 CDS YP_070858.1 51596667 2954211 2765525..2765737 1 NC_006155.1 similar to Yersinia pestis YPO2434 conserved hypothetical protein (98.5% evalue=9.E-35); hypothetical protein 2765737 2954211 YPTB2343 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070858.1 2765525 D 273123 CDS YP_070859.1 51596668 2954212 2766047..2766424 1 NC_006155.1 similar to Yersinia pestis YPO2435 membrane protein (98.4% evalue=2.E-70); hypothetical protein 2766424 2954212 YPTB2344 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070859.1 2766047 D 273123 CDS YP_070860.1 51596669 2956002 2767066..2767749 1 NC_006155.1 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 2767749 marC 2956002 marC Yersinia pseudotuberculosis IP 32953 multiple drug resistance protein MarC YP_070860.1 2767066 D 273123 CDS YP_070861.1 51596670 2954213 complement(2767871..2768533) 1 NC_006155.1 similar to Yersinia pestis YPO2438 membrane-bound lytic murein transglycosylase (99.5% evalue=1.E-122); Escherichia coli b1193 mlte, sltz.; membrane-bound lytic murein transglycosylase E (49.7% evalue=2.E-52); membrane-bound lytic murein transglycosylase 2768533 2954213 YPTB2346 Yersinia pseudotuberculosis IP 32953 membrane-bound lytic murein transglycosylase YP_070861.1 2767871 R 273123 CDS YP_070862.1 51596671 2957018 2768745..2769713 1 NC_006155.1 similar to Yersinia pestis YPO2439 yfeA; periplasmic-binding protein (100% evalue=0); Pasteurella multocida PM0400 yfeA; Mn transport protein ABC transporter, iron (chelated) transporter, periplasmic-binding protein, (76.9% evalue=1.E-122); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; iron siderophore-ABC transporter substrate-binding protein YfeA 2769713 yfeA 2957018 yfeA Yersinia pseudotuberculosis IP 32953 iron siderophore-ABC transporter substrate-binding protein YfeA YP_070862.1 2768745 D 273123 CDS YP_070863.1 51596672 2957019 2769710..2770600 1 NC_006155.1 similar to Yersinia pestis YPO2440 yfeB; ATP-binding transport protein (100% evalue=1.E-167); Pasteurella multocida PM0399 yfeB; iron(III) dicitrate transport ATP-binding protein,iron (chelated) transporter (72% evalue=1.E-113); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter ATP-binding protein yfeB 2770600 yfeB 2957019 yfeB Yersinia pseudotuberculosis IP 32953 chelated iron ABC transporter ATP-binding protein yfeB YP_070863.1 2769710 D 273123 CDS YP_070864.1 51596673 2957020 2770600..2771484 1 NC_006155.1 similar to Yersinia pestis YPO2441 yfeC; chelated iron transport system membrane protein (99.6% evalue=1.E-161); Pasteurella multocida PM0398 yfeC; iron (chelated) ABC transporter, permease, (74.2% evalue=1.E-113); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter permease yfeC 2771484 yfeC 2957020 yfeC Yersinia pseudotuberculosis IP 32953 chelated iron ABC transporter permease yfeC YP_070864.1 2770600 D 273123 CDS YP_070865.1 51596674 2957021 2771481..2772374 1 NC_006155.1 similar to Yersinia pestis YPO2442 yfeD; chelated iron transport system membrane protein (100% evalue=1.E-166); Pasteurella multocida PM0397 yfeD; iron (chelated) transporter, permease (64.2% evalue=1.E-102); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter permease yfeD 2772374 yfeD 2957021 yfeD Yersinia pseudotuberculosis IP 32953 chelated iron ABC transporter permease yfeD YP_070865.1 2771481 D 273123 CDS YP_070866.1 51596675 2954214 2772442..2772654 1 NC_006155.1 similar to Yersinia pestis YPO2443 hypothetical protein, 100% identical; hypothetical protein 2772654 2954214 YPTB2351 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070866.1 2772442 D 273123 CDS YP_070867.1 51596676 2954215 2772679..2773554 1 NC_006155.1 similar to Yersinia pestis YPO2444 conserved hypothetical protein (100% evalue=1.E-174); Salmonella typhi STY1787 conserved hypothetical protein (70.4% evalue=1.E-119); hypothetical protein 2773554 2954215 YPTB2352 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070867.1 2772679 D 273123 CDS YP_070868.1 51596677 2957022 complement(2773683..2774237) 1 NC_006155.1 similar to Yersinia pestis YPO2445 yfeE; yfeABCD locus regulator (100% evalue=1.E-101); Salmonella typhi STY1788 membrane protein (67.4% evalue=2.E-68); yfeABCD locus regulator 2774237 yfeE 2957022 yfeE Yersinia pseudotuberculosis IP 32953 yfeABCD locus regulator YP_070868.1 2773683 R 273123 CDS YP_070869.1 51596678 2954216 2774648..2775313 1 NC_006155.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 2775313 2954216 YPTB2354 Yersinia pseudotuberculosis IP 32953 2-deoxyglucose-6-phosphatase YP_070869.1 2774648 D 273123 CDS YP_070870.1 51596679 2955910 complement(2775515..2775847) 1 NC_006155.1 similar to Sinorhizobium meliloti SMb21347 pectin degradation protein (44.9% evalue=2.E-18); Clostridium acetobutylicum CAC3376 possible pectin degradation protein (sugar phosphate isomerase family) (43.9% evalue=2.E-20); pectin degradation protein 2775847 kdgF 2955910 kdgF Yersinia pseudotuberculosis IP 32953 pectin degradation protein YP_070870.1 2775515 R 273123 CDS YP_070871.1 51596680 2955924 2776183..2777019 1 NC_006155.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2777019 kduI 2955924 kduI Yersinia pseudotuberculosis IP 32953 5-keto-4-deoxyuronate isomerase YP_070871.1 2776183 D 273123 CDS YP_070872.1 51596681 2955922 2777111..2777872 1 NC_006155.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2777872 kduD1 2955922 kduD1 Yersinia pseudotuberculosis IP 32953 2-deoxy-D-gluconate 3-dehydrogenase YP_070872.1 2777111 D 273123 CDS YP_070873.1 51596682 2956228 2778217..2779884 1 NC_006155.1 similar to Yersinia pestis YPO3994 pelY; periplasmic pectate lyase precursor (38.7% evalue=1.E-102); exopolygalacturonate lyase 2779884 pelW 2956228 pelW Yersinia pseudotuberculosis IP 32953 exopolygalacturonate lyase YP_070873.1 2778217 D 273123 CDS YP_070874.1 51596683 2954217 2779925..2780815 1 NC_006155.1 similar to Yersinia pestis YPO1722 ABC sugar transporter (permease) (100% evalue=1.E-170); Agrobacterium tumefaciens AGR_L_3351 yesP; probable ABC transporter permease YesP (60.1% evalue=1.E-101); sugar ABC transporter (permease) 2780815 2954217 YPTB2359 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter (permease) YP_070874.1 2779925 D 273123 CDS YP_070875.1 51596684 2954218 2780808..2781728 1 NC_006155.1 similar to Yersinia pestis YPO1721 sugar ABC transporter (permease) (100% evalue=1.E-175); Agrobacterium tumefaciens AGR_L_3353 lactose transport system (permease) (57.6% evalue=8.E-98); sugar ABC transporter permease 2781728 2954218 YPTB2360 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_070875.1 2780808 D 273123 CDS YP_070876.1 51596685 2954219 2781742..2782869 1 NC_006155.1 similar to Yersinia pestis YPO1720 sugar ABC transporter (100% evalue=0); sugar ABC transporter ATPase 2782869 2954219 YPTB2361 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_070876.1 2781742 D 273123 CDS YP_070877.1 51596686 2954220 2782885..2784177 1 NC_006155.1 similar to Yersinia pestis YPO1719 sugar-binding protein (100% evalue=0); Agrobacterium tumefaciens AGR_L_3359 unknown conserved protein (38.7% evalue=1.E-77); sugar ABC transporter substrate-binding protein 2784177 2954220 YPTB2362 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_070877.1 2782885 D 273123 CDS YP_070878.1 51596687 2954221 2784476..2785186 1 NC_006155.1 similar to Yersinia pestis YPO3995 exported protein (63.5% evalue=2.E-83); oligogalacturonate specific porin 2785186 2954221 YPTB2363 Yersinia pseudotuberculosis IP 32953 oligogalacturonate specific porin YP_070878.1 2784476 D 273123 CDS YP_070879.1 51596688 2956997 2785663..2786211 1 NC_006155.1 similar to Yersinia pestis YPO1717 ydjM; membrane protein (100% evalue=1.E-105); Escherichia coli ECs2434 hypothetical protein (66.4% evalue=1.E-63); hypothetical protein 2786211 ydjM 2956997 ydjM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070879.1 2785663 D 273123 CDS YP_070880.1 51596689 2955723 2786415..2787806 1 NC_006155.1 similar to Yersinia pestis YPO1716 gltP; transport protein (100% evalue=0); Escherichia coli JW1718 proton glutamate symport protein (gltP) homolog (83.9% evalue=0); DAACS family sodium/dicarboxylate symporter 2787806 gltP 2955723 gltP Yersinia pseudotuberculosis IP 32953 DAACS family sodium/dicarboxylate symporter YP_070880.1 2786415 D 273123 CDS YP_070881.1 51596690 2956968 complement(2788021..2788872) 1 NC_006155.1 similar to Yersinia pestis YPO1715 ybjR; probable N-acetylmuramoyl-L-alanine amidase (98.9% evalue=1.E-160); Salmonella typhi STY0927 N-acetylmuramoyl-L-alanine amidase (48.3% evalue=1.E-66); N-acetylmuramoyl-L-alanine amidase 2788872 ybjR 2956968 ybjR Yersinia pseudotuberculosis IP 32953 N-acetylmuramoyl-L-alanine amidase YP_070881.1 2788021 R 273123 CDS YP_070882.1 51596691 2955912 complement(2789247..2790038) 1 NC_006155.1 similar to Yersinia pestis YPO1714 kdgR; IclR-family transcriptional regulatory protein (100% evalue=1.E-145); Escherichia coli JW1816 kdgR; Transcriptional regulator (86.3% evalue=1.E-123); IclR family transcriptional regulator 2790038 kdgR 2955912 kdgR Yersinia pseudotuberculosis IP 32953 IclR family transcriptional regulator YP_070882.1 2789247 R 273123 CDS YP_070883.1 51596692 2956184 complement(2790225..2791391) 1 NC_006155.1 similar to Yersinia pestis YPO1713 ogl; oligogalacturonate lyase (99.7% evalue=0); oligogalacturonate lyase 2791391 ogl 2956184 ogl Yersinia pseudotuberculosis IP 32953 oligogalacturonate lyase YP_070883.1 2790225 R 273123 CDS YP_070884.1 51596693 2954222 2791758..2793125 1 NC_006155.1 similar to Yersinia pestis YPO1712 transport protein (99.7% evalue=0); Salmonella typhimurium STM1843 transport protein (69% evalue=0); major facilitator superfamily multidrug efflux transporter 2793125 2954222 YPTB2369 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily multidrug efflux transporter YP_070884.1 2791758 D 273123 CDS YP_070885.1 51596694 2954223 complement(2793179..2793982) 1 NC_006155.1 similar to Yersinia pestis YPO3881 chaperone protein (33.6% evalue=8.E-34); chaperone protein 2793982 2954223 YPTB2370 Yersinia pseudotuberculosis IP 32953 chaperone protein YP_070885.1 2793179 R 273123 CDS YP_070886.1 51596695 2954224 complement(2793979..2795142) 1 NC_006155.1 similar to Yersinia pestis YPO1710 fimbrial protein (100% evalue=0); Pseudomonas aeruginosa PA5284 hypothetical protein (24.2% evalue=2.E-13); fimbrial protein 2795142 2954224 YPTB2371 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_070886.1 2793979 R 273123 CDS YP_070887.1 51596696 2955848 complement(2795139..2797751) 1 NC_006155.1 similar to Yersinia pestis YPO1709 htrE; outer membrane usher protein (99.8% evalue=0); Xylella fastidiosa XF0081 outer membrane usher protein precursor (39.9% evalue=1.E-172); outer membrane fimbrial usher porin 2797751 htrE 2955848 htrE Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_070887.1 2795139 R 273123 CDS YP_070888.1 51596697 2955494 complement(2797833..2798612) 1 NC_006155.1 similar to Yersinia pestis YPO1708 ecpD; chaperone protein (100% evalue=1.E-141); Escherichia coli Z0151 ecpD; fimbrial chaperone protein (41.1% evalue=4.E-48); chaperone protein 2798612 ecpD 2955494 ecpD Yersinia pseudotuberculosis IP 32953 chaperone protein YP_070888.1 2797833 R 273123 CDS YP_070889.1 51596698 2954225 complement(2798850..2799392) 1 NC_006155.1 similar to Yersinia pestis YPO1707 fimbrial protein (99.4% evalue=4.E-97); Xylella fastidiosa XF0083 fimbrial subunit precursor (42.1% evalue=6.E-25); fimbrial protein 2799392 2954225 YPTB2374 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_070889.1 2798850 R 273123 CDS YP_070890.1 51596699 2955845 complement(2800050..2800931) 1 NC_006155.1 metalloprotease; heat shock protein HtpX 2800931 htpX 2955845 htpX Yersinia pseudotuberculosis IP 32953 heat shock protein HtpX YP_070890.1 2800050 R 273123 CDS YP_070891.1 51596700 2956315 complement(2801394..2803472) 1 NC_006155.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2803472 prc 2956315 prc Yersinia pseudotuberculosis IP 32953 carboxy-terminal protease YP_070891.1 2801394 R 273123 CDS YP_070892.1 51596701 2956325 complement(2803492..2804205) 1 NC_006155.1 affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 2804205 proQ 2956325 proQ Yersinia pseudotuberculosis IP 32953 solute/DNA competence effector YP_070892.1 2803492 R 273123 CDS YP_070893.1 51596702 2954226 complement(2804301..2804798) 1 NC_006155.1 similar to Yersinia pestis YPO1703 conserved hypothetical protein (100% evalue=4.E-91); Escherichia coli ECs2542 hypothetical protein (66.4% evalue=2.E-57); hypothetical protein 2804798 2954226 YPTB2378 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070893.1 2804301 R 273123 CDS YP_070894.1 51596703 2957000 2804925..2806277 1 NC_006155.1 similar to Yersinia pestis YPO1702 yebS; membrane protein (99.7% evalue=0); Salmonella typhimurium STM1848 yebS; inner membrane protein (67.2% evalue=1.E-166); hypothetical protein 2806277 yebS 2957000 yebS Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070894.1 2804925 D 273123 CDS YP_070895.1 51596704 2954227 2806246..2808897 1 NC_006155.1 similar to Yersinia pestis YPO1701 conserved hypothetical protein (99.6% evalue=0); Escherichia coli JW1823 pqiB; Hypothetical protein (67.8% evalue=0); hypothetical protein 2808897 2954227 YPTB2380 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070895.1 2806246 D 273123 CDS YP_070896.1 51596705 2954228 2809377..2809931 1 NC_006155.1 similar to Yersinia pestis YPO1700 exported protein (100% evalue=1.E-101); hypothetical protein 2809931 2954228 YPTB2381 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070896.1 2809377 D 273123 CDS YP_070897.1 51596706 2954229 2809937..2810467 1 NC_006155.1 similar to Yersinia pestis YPO1699 exported protein (99.4% evalue=4.E-95); Pseudomonas aeruginosa PA4649 hypothetical protein (41.3% evalue=6.E-29); hypothetical protein 2810467 2954229 YPTB2382 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070897.1 2809937 D 273123 CDS YP_070898.1 51596707 2954230 2810488..2811045 1 NC_006155.1 similar to Yersinia pestis YPO1698 exported protein (98.9% evalue=5.E-99); Pseudomonas aeruginosa PA4650 hypothetical protein (34.8% evalue=3.E-22); hypothetical protein 2811045 2954230 YPTB2383 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070898.1 2810488 D 273123 CDS YP_070899.1 51596708 2954232 2811932..2814379 1 NC_006155.1 similar to Yersinia pestis YPO1696 probable outer membrane usher protein (99.3% evalue=0); Ralstonia solanacearum RS03043 probable signal peptide protein (30.3% evalue=4.E-94); outer membrane usher protein 2814379 2954232 YPTB2385 Yersinia pseudotuberculosis IP 32953 outer membrane usher protein YP_070899.1 2811932 D 273123 CDS YP_070900.1 51596709 2954233 2814585..2815574 1 NC_006155.1 similar to Yersinia pestis YPO1695 membrane protein (98.7% evalue=0); Pseudomonas aeruginosa PA4653 hypothetical protein (42.1% evalue=2.E-58); hypothetical protein 2815574 2954233 YPTB2386 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070900.1 2814585 D 273123 CDS YP_070901.1 51596710 2954234 2815782..2816021 1 NC_006155.1 similar to Yersinia pestis YPO1694 conserved hypothetical protein (100% evalue=5.E-42); Salmonella typhi STY1982 conserved hypothetical protein (60.2% evalue=3.E-24); hypothetical protein 2816021 2954234 YPTB2387 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070901.1 2815782 D 273123 CDS YP_070902.1 51596711 2954235 complement(2816131..2816520) 1 NC_006155.1 similar to Yersinia pestis YPO1693 conserved hypothetical protein (99.2% evalue=3.E-70); Escherichia coli Z0414 hypothetical protein (34.9% evalue=1.E-18); hypothetical protein 2816520 2954235 YPTB2388 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070902.1 2816131 R 273123 CDS YP_070903.1 51596712 2954236 complement(2817320..2817553) 1 NC_006155.1 similar to Yersinia pestis YPO1690 hypothetical protein (100% evalue=2.E-37); Escherichia coli Z2040 unknown protein encoded by prophage CP-933O (34.2% evalue=5.E-09); hypothetical protein 2817553 2954236 YPTB2389 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070903.1 2817320 R 273123 CDS YP_070904.1 51596713 2954237 complement(2817708..2818964) 1 NC_006155.1 similar to Yersinia pestis YPO1689 lipoprotein (100% evalue=0); Mesorhizobium loti mlr2407 unknown protein (37.7% evalue=1.E-65); lipoprotein 2818964 2954237 YPTB2390 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070904.1 2817708 R 273123 CDS YP_070905.1 51596714 2954238 complement(2819357..2819605) 1 NC_006155.1 similar to Yersinia pestis YPO1688 hypothetical protein (100% evalue=1.E-43); hypothetical protein 2819605 2954238 YPTB2391 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070905.1 2819357 R 273123 CDS YP_070906.1 51596715 2954239 2820749..2821978 1 NC_006155.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 2821978 alr 2954239 alr Yersinia pseudotuberculosis IP 32953 alanine racemase YP_070906.1 2820749 D 273123 CDS YP_070907.1 51596716 2954240 complement(2822596..2823549) 1 NC_006155.1 similar to Yersinia pestis YPO1686 exported protein (100% evalue=1.E-176); hypothetical protein 2823549 2954240 YPTB2393 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070907.1 2822596 R 273123 CDS YP_070908.1 51596717 2954241 complement(2823649..2826291) 1 NC_006155.1 similar to Yersinia pestis YPO0902 surface protein (partial) (58.9% evalue=0); surface protein 2826291 2954241 YPTB2394 Yersinia pseudotuberculosis IP 32953 surface protein YP_070908.1 2823649 R 273123 CDS YP_070909.1 51596718 2954242 complement(2826648..2827412) 1 NC_006155.1 similar to Yersinia pestis YPO1683 probable N-acetylmuramoyl-L-alanine amidase (98.8% evalue=1.E-148); Pseudomonas aeruginosa PA0807 conserved hypothetical protein (61.2% evalue=1.E-85); N-acetylmuramoyl-L-alanine amidase 2827412 2954242 YPTB2395 Yersinia pseudotuberculosis IP 32953 N-acetylmuramoyl-L-alanine amidase YP_070909.1 2826648 R 273123 CDS YP_070910.1 51596719 2955330 complement(2827947..2828591) 1 NC_006155.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 2828591 cheZ 2955330 cheZ Yersinia pseudotuberculosis IP 32953 chemotaxis regulator CheZ YP_070910.1 2827947 R 273123 CDS YP_070911.1 51596720 2955329 complement(2828601..2828990) 1 NC_006155.1 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY 2828990 cheY 2955329 cheY Yersinia pseudotuberculosis IP 32953 chemotaxis regulatory protein CheY YP_070911.1 2828601 R 273123 CDS YP_070912.1 51596721 2955324 complement(2829091..2830140) 1 NC_006155.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2830140 cheB 2955324 cheB Yersinia pseudotuberculosis IP 32953 chemotaxis-specific methylesterase YP_070912.1 2829091 R 273123 CDS YP_070913.1 51596722 2955327 complement(2830140..2831012) 1 NC_006155.1 methylates the MCP; chemotaxis methyltransferase CheR 2831012 cheR 2955327 cheR Yersinia pseudotuberculosis IP 32953 chemotaxis methyltransferase CheR YP_070913.1 2830140 R 273123 CDS YP_070914.1 51596723 2956659 complement(2831185..2832795) 1 NC_006155.1 similar to Escherichia coli b1885 tap; methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide chemoreceptor protein) (55% evalue=1.E-142); Escherichia coli JW1874 tap (55% evalue=1.E-142); methyl-accepting chemotaxis protein IV 2832795 tap 2956659 tap Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein IV YP_070914.1 2831185 R 273123 CDS YP_070915.1 51596724 2955325 complement(2832980..2834653) 1 NC_006155.1 similar to Yersinia pestis YPO1675 cheD; methyl-accepting chemotaxis protein (99.8% evalue=0); Salmonella typhimurium STM4533 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor (68.7% evalue=0); methyl-accepting chemotaxis protein 2834653 cheD 2955325 cheD Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein YP_070915.1 2832980 R 273123 CDS YP_070916.2 229310103 2954243 complement(2834894..2835574) 1 NC_006155.1 similar to Yersinia pestis YPO1674 lipoprotein (99.5% evalue=1.E-133); Escherichia coli ECs4631 replicase (29.9% evalue=3.E-18); hypothetical protein 2835574 2954243 YPTB2402 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070916.2 2834894 R 273123 CDS YP_070917.1 51596726 2954244 complement(2835709..2838528) 1 NC_006155.1 similar to Yersinia pestis YPO1673 integral membrane protein (97.3% evalue=0); Mesorhizobium loti mlr7771 unknown protein (26.6% evalue=1.E-44); hypothetical protein 2838528 2954244 YPTB2403 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070917.1 2835709 R 273123 CDS YP_070918.1 51596727 2955328 complement(2839148..2839645) 1 NC_006155.1 similar to Yersinia pestis YPO1667 cheW; chemotaxis protein CheW (99.3% evalue=9.E-85); Escherichia coli ECs2597 positive regulator of CheA protein activity (84.6% evalue=1.E-72); purine-binding chemotaxis protein 2839645 cheW 2955328 cheW Yersinia pseudotuberculosis IP 32953 purine-binding chemotaxis protein YP_070918.1 2839148 R 273123 CDS YP_070919.1 51596728 2955323 complement(2839808..2841979) 1 NC_006155.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 2841979 cheA 2955323 cheA Yersinia pseudotuberculosis IP 32953 chemotaxis protein CheA YP_070919.1 2839808 R 273123 CDS YP_070920.1 51596729 2956070 complement(2841990..2843309) 1 NC_006155.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 2843309 motB 2956070 motB Yersinia pseudotuberculosis IP 32953 flagellar motor protein MotB YP_070920.1 2841990 R 273123 CDS YP_070921.1 51596730 2956068 complement(2843306..2844193) 1 NC_006155.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 2844193 motA 2956068 motA Yersinia pseudotuberculosis IP 32953 flagellar motor protein MotA YP_070921.1 2843306 R 273123 CDS YP_070922.1 51596731 2955589 complement(2844982..2845332) 1 NC_006155.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 2845332 flhD 2955589 flhD Yersinia pseudotuberculosis IP 32953 transcriptional activator FlhD YP_070922.1 2844982 R 273123 CDS YP_070923.1 51596732 2956037 complement(2846520..2849219) 1 NC_006155.1 similar to Yersinia pestis YPO1661 mgtB; Mg(2+) transport ATPase B (99.7% evalue=0); Pseudomonas aeruginosa PA4825 mgtA; Mg(2+) transport ATPase, P-type 2 (75.1% evalue=0); Mg(2+) transport protein B, P-type ATPase 2849219 mgtB 2956037 mgtB Yersinia pseudotuberculosis IP 32953 Mg(2+) transport protein B, P-type ATPase YP_070923.1 2846520 R 273123 CDS YP_070924.1 51596733 2956038 complement(2849628..2850326) 1 NC_006155.1 similar to Yersinia pestis YPO1660 mgtC; Mg(2+) transport ATPase C (99.5% evalue=1.E-126); Salmonella typhi STY4022 mgtC; conserved hyopthetical protein (63.3% evalue=4.E-72); magnesium ABC transporter ATPase 2850326 mgtC1 2956038 mgtC1 Yersinia pseudotuberculosis IP 32953 magnesium ABC transporter ATPase YP_070924.1 2849628 R 273123 CDS YP_070925.1 51596734 2956731 2851452..2853191 1 NC_006155.1 similar to Salmonella typhimurium STM1626 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor (60.3% evalue=1.E-159); Escherichia coli JW1417 trg (58% evalue=1.E-158); methyl-accepting chemotaxis protein III 2853191 trg 2956731 trg Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein III YP_070925.1 2851452 D 273123 CDS YP_070926.1 51596735 2954245 complement(2853374..2853565) 1 NC_006155.1 similar to Yersinia pestis YPO1656 conserved hypothetical protein (100% evalue=1.E-30); Salmonella typhi STY2191 dsrB; DsrB protein (79.3% evalue=8.E-23); hypothetical protein 2853565 2954245 YPTB2413 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070926.1 2853374 R 273123 CDS YP_070927.1 51596736 2955371 complement(2853780..2853992) 1 NC_006155.1 similar to Yersinia pestis YPO1746 cspC, msmB; cold shock protein (86.3% evalue=7.E-28); cold shock protein 2853992 cspC 2955371 cspC Yersinia pseudotuberculosis IP 32953 cold shock protein YP_070927.1 2853780 R 273123 CDS YP_070928.1 51596737 2955932 2854533..2857733 1 NC_006155.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 2857733 lacZ 2955932 lacZ Yersinia pseudotuberculosis IP 32953 beta-D-galactosidase YP_070928.1 2854533 D 273123 CDS YP_070929.1 51596738 2954246 2858140..2859150 1 NC_006155.1 similar to Yersinia pestis YPO1653 probable Zinc-binding dehydrogenase (99.4% evalue=0); Brucella melitensis BMEI0302 quinone oxidoreductase (61.9% evalue=1.E-113); Zinc-binding dehydrogenase 2859150 2954246 YPTB2416 Yersinia pseudotuberculosis IP 32953 Zinc-binding dehydrogenase YP_070929.1 2858140 D 273123 CDS YP_070930.1 51596739 2957093 2859433..2859966 1 NC_006155.1 similar to Yersinia pestis YPO1652 ylaC; membrane protein (100% evalue=2.E-98); Escherichia coli Z0570 ylaC; orf, hypothetical protein (34.4% evalue=6.E-25); hypothetical protein 2859966 ylaC 2957093 ylaC Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070930.1 2859433 D 273123 CDS YP_070931.1 51596740 2954247 2860491..2860940 1 NC_006155.1 similar to Yersinia pestis YPO1651 AsnC-family transcriptional regulatory protein (100% evalue=2.E-79); Sinorhizobium meliloti SMc00425 transcription regulator protein (52% evalue=3.E-42); transcription regulator AsnC 2860940 2954247 YPTB2418 Yersinia pseudotuberculosis IP 32953 transcription regulator AsnC YP_070931.1 2860491 D 273123 CDS YP_070932.1 51596741 2954248 2861029..2861931 1 NC_006155.1 similar to Yersinia pestis YPO1650 hypothetical protein (99% evalue=1.E-173); Ralstonia solanacearum RS04392 hypothetical protein (41% evalue=3.E-55); hypothetical protein 2861931 2954248 YPTB2419 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070932.1 2861029 D 273123 CDS YP_070933.1 51596742 2954249 2862234..2862437 1 NC_006155.1 similar to Yersinia pestis YPO1649 conserved hypothetical protein (100% evalue=2.E-31); Salmonella typhi HCM2.0096 hypothetical protein (44.6% evalue=2.E-07); hypothetical protein 2862437 2954249 YPTB2420 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070933.1 2862234 D 273123 CDS YP_070934.1 51596743 2954250 complement(2862731..2864056) 1 NC_006155.1 similar to Yersinia pestis YPO1648 probable histidine acid phosphatase / 6-phytase (99.7% evalue=0); Escherichia coli JW0963 appA; acid phosphatase / 6-phytase (45.8% evalue=1.E-100); phosphoanhydride phosphorylase 2864056 2954250 YPTB2421 Yersinia pseudotuberculosis IP 32953 phosphoanhydride phosphorylase YP_070934.1 2862731 R 273123 CDS YP_070935.1 51596744 2954251 complement(2864588..2864995) 1 NC_006155.1 similar to Yersinia pestis YPO1646 conserved hypothetical protein (100% evalue=5.E-68); Escherichia coli ECs5189 hypothetical protein (62.2% evalue=8.E-40); hypothetical protein 2864995 2954251 YPTB2422 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070935.1 2864588 R 273123 CDS YP_070936.1 51596745 2954252 2865131..2865988 1 NC_006155.1 similar to Yersinia pestis YPO1645 conserved hypothetical protein (99.2% evalue=1.E-154); Escherichia coli ECs5190 oxidoreductase (66.3% evalue=1.E-98); hypothetical protein 2865988 2954252 YPTB2423 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070936.1 2865131 D 273123 CDS YP_070937.1 51596746 2955176 2866909..2868489 1 NC_006155.1 similar to Yersinia pestis YPO1644 aer, air; methyl-accepting chemotaxis protein (99.8% evalue=0); Ralstonia solanacearum RS03168 aer, RSp1224; probable aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein (53.6% evalue=1.E-144); methyl-accepting chemotaxis protein 2868489 aer 2955176 aer Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein YP_070937.1 2866909 D 273123 CDS YP_070938.1 51596747 2954253 2868609..2868869 1 NC_006155.1 similar to Yersinia pestis YPO1643 hypothetical protein (100% evalue=2.E-42); hypothetical protein 2868869 2954253 YPTB2425 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070938.1 2868609 D 273123 CDS YP_070939.1 51596748 2955364 2869124..2870167 1 NC_006155.1 similar to Yersinia pestis YPO1642 cscR; sucrose operon repressor LacI-family (99.4% evalue=0); Escherichia coli ECs3244 sucrose operon repressor (60% evalue=1.E-113); LacI family sucrose operon repressor 2870167 cscR 2955364 cscR Yersinia pseudotuberculosis IP 32953 LacI family sucrose operon repressor YP_070939.1 2869124 D 273123 CDS YP_070940.1 51596749 2955863 complement(2870301..2871554) 1 NC_006155.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2871554 icdA 2955863 icdA Yersinia pseudotuberculosis IP 32953 isocitrate dehydrogenase YP_070940.1 2870301 R 273123 CDS YP_070941.1 51596750 2957094 2871685..2872311 1 NC_006155.1 similar to Yersinia pestis YPO1640 ymfC; pseudouridine synthase (100% evalue=1.E-118); Escherichia coli JW1121 ymfC; Hypothetical protein (73.4% evalue=5.E-87); pseudouridine synthase 2872311 ymfC 2957094 ymfC Yersinia pseudotuberculosis IP 32953 pseudouridine synthase YP_070941.1 2871685 D 273123 CDS YP_070942.1 51596751 2954254 2872304..2872750 1 NC_006155.1 similar to Yersinia pestis YPO1639 conserved hypothetical protein (99.3% evalue=9.E-85); Escherichia coli Z1863 phosphohydrolase (75.5% evalue=1.E-64); hypothetical protein 2872750 2954254 YPTB2429 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070942.1 2872304 D 273123 CDS YP_070943.1 51596752 2956738 2872937..2874052 1 NC_006155.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2874052 mnmA 2956738 mnmA Yersinia pseudotuberculosis IP 32953 tRNA-specific 2-thiouridylase MnmA YP_070943.1 2872937 D 273123 CDS YP_070944.1 51596753 2954255 2874110..2874736 1 NC_006155.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2874736 2954255 YPTB2431 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070944.1 2874110 D 273123 CDS YP_070945.1 51596754 2956367 2874797..2876167 1 NC_006155.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2876167 purB 2956367 purB Yersinia pseudotuberculosis IP 32953 adenylosuccinate lyase YP_070945.1 2874797 D 273123 CDS YP_070946.1 51596755 2954256 2876355..2876978 1 NC_006155.1 similar to Yersinia pestis YPO1635 lipoprotein (100% evalue=1.E-117); lipoprotein 2876978 2954256 YPTB2433 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070946.1 2876355 D 273123 CDS YP_070947.1 51596756 2956268 2877189..2877860 1 NC_006155.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2877860 phoP 2956268 phoP Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator PhoP YP_070947.1 2877189 D 273123 CDS YP_070948.1 51596757 2956269 2877866..2879320 1 NC_006155.1 similar to Yersinia pestis YPO1633 phoQ; sensor protein kinase (100% evalue=0); Salmonella typhi STY1270 phoQ; sensor protein PhoQ, regulator of virulence determinants (62.5% evalue=1.E-172); sensor protein PhoQ 2879320 phoQ 2956269 phoQ Yersinia pseudotuberculosis IP 32953 sensor protein PhoQ YP_070948.1 2877866 D 273123 CDS YP_070949.1 51596758 2954257 2879404..2880525 1 NC_006155.1 similar to Yersinia pestis YPO1632 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM1229 ycfD; cytoplasmic protein (78.7% evalue=0); hypothetical protein 2880525 2954257 YPTB2436 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070949.1 2879404 D 273123 CDS YP_070950.1 51596759 2956236 complement(2880758..2881993) 1 NC_006155.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2881993 pepT 2956236 pepT Yersinia pseudotuberculosis IP 32953 peptidase T YP_070950.1 2880758 R 273123 CDS YP_070951.1 51596760 2955346 complement(2882323..2883159) 1 NC_006155.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2883159 cobB 2955346 cobB Yersinia pseudotuberculosis IP 32953 NAD-dependent deacetylase YP_070951.1 2882323 R 273123 CDS YP_070952.1 51596761 2954258 complement(2883208..2884122) 1 NC_006155.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 2884122 2954258 YPTB2439 Yersinia pseudotuberculosis IP 32953 N-acetyl-D-glucosamine kinase YP_070952.1 2883208 R 273123 CDS YP_070953.1 51596762 2955960 complement(2884141..2885388) 1 NC_006155.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 2885388 lolE 2955960 lolE Yersinia pseudotuberculosis IP 32953 outer membrane-specific lipoprotein transporter subunit LolE YP_070953.1 2884141 R 273123 CDS YP_070954.1 51596763 2955959 complement(2885388..2886092) 1 NC_006155.1 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 2886092 lolD 2955959 lolD Yersinia pseudotuberculosis IP 32953 lipoprotein transporter ATP-binding subunit YP_070954.1 2885388 R 273123 CDS YP_070955.1 51596764 2955958 complement(2886085..2887287) 1 NC_006155.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 2887287 lolC 2955958 lolC Yersinia pseudotuberculosis IP 32953 outer membrane-specific lipoprotein transporter subunit LolC YP_070955.1 2886085 R 273123 CDS YP_070956.1 51596765 2956031 2887557..2891003 1 NC_006155.1 similar to Yersinia pestis YPO1625 mfd; transcription-repair coupling factor (99.6% evalue=0); Escherichia coli ECs1492 transcription-repair coupling factor (80.8% evalue=0); transcription-repair coupling factor 2891003 mfd 2956031 mfd Yersinia pseudotuberculosis IP 32953 transcription-repair coupling factor YP_070956.1 2887557 D 273123 CDS YP_070957.1 51596766 2956981 complement(2891242..2891781) 1 NC_006155.1 similar to Yersinia pestis YPO1624 ycfJ; exported protein (99.4% evalue=4.E-98); Escherichia coli JW1096 ycfJ; Hypothetical protein (80.3% evalue=4.E-84); hypothetical protein 2891781 ycfJ 2956981 ycfJ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070957.1 2891242 R 273123 CDS YP_070958.1 51596767 2954259 complement(2892092..2892505) 1 NC_006155.1 similar to Yersinia pestis YPO1620 hypothetical protein (100% evalue=7.E-76); hypothetical protein 2892505 2954259 YPTB2445 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070958.1 2892092 R 273123 CDS YP_070959.1 51596768 2954260 complement(2892513..2893217) 1 NC_006155.1 similar to Yersinia pestis YPO3066 hypothetical protein (53.8% evalue=2.E-47); hypothetical protein 2893217 2954260 YPTB2446 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070959.1 2892513 R 273123 CDS YP_070960.1 51596769 2956133 complement(2893802..2895106) 1 NC_006155.1 similar to Yersinia pestis YPO1617 ndh; NADH dehydrogenase (99.7% evalue=0); Escherichia coli JW1095 ndh; NADH dehydrogenase (82.2% evalue=0); NADH dehydrogenase 2895106 ndh 2956133 ndh Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase YP_070960.1 2893802 R 273123 CDS YP_070961.1 51596770 2954261 complement(2895480..2896022) 1 NC_006155.1 similar to Yersinia pestis YPO1616 conserved hypothetical protein (100% evalue=1.E-105); Salmonella typhi STY1250 conserved hypothetical protein (80.5% evalue=2.E-86); hypothetical protein 2896022 2954261 YPTB2448 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070961.1 2895480 R 273123 CDS YP_070962.1 51596771 2956983 complement(2896150..2897181) 1 NC_006155.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2897181 ycfO 2956983 ycfO Yersinia pseudotuberculosis IP 32953 beta-hexosaminidase YP_070962.1 2896150 R 273123 CDS YP_070963.1 51596772 2954262 complement(2897252..2898118) 1 NC_006155.1 similar to Yersinia pestis YPO1614 conserved hypothetical protein (99.6% evalue=1.E-159); Escherichia coli ECs1484 beta-glucosidase (37.4% evalue=9.E-34); hypothetical protein 2898118 2954262 YPTB2450 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070963.1 2897252 R 273123 CDS YP_070964.1 51596773 2954263 complement(2898099..2898674) 1 NC_006155.1 similar to Yersinia pestis YPO1613 lipoprotein (99.4% evalue=1.E-103); Salmonella typhimurium STM1207 ycfM; outer membrane lipoprotein (49.2% evalue=3.E-48); lipoprotein 2898674 2954263 YPTB2451 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070964.1 2898099 R 273123 CDS YP_070965.1 51596774 2956982 complement(2898715..2899104) 1 NC_006155.1 similar to Yersinia pestis YPO1612 ycfL; lipoprotein (100% evalue=7.E-68); Escherichia coli ECs1482 hypothetical protein (46.3% evalue=1.E-21); lipoprotein 2899104 ycfL 2956982 ycfL Yersinia pseudotuberculosis IP 32953 lipoprotein YP_070965.1 2898715 R 273123 CDS YP_070966.1 51596775 2954264 complement(2899139..2899492) 1 NC_006155.1 similar to Yersinia pestis YPO1611 conserved hypothetical protein (100% evalue=9.E-63); Salmonella typhi STY1245 protein kinase C inhibitor (86.3% evalue=4.E-55); purine nucleoside phosphoramidase 2899492 2954264 YPTB2453 Yersinia pseudotuberculosis IP 32953 purine nucleoside phosphoramidase YP_070966.1 2899139 R 273123 CDS YP_070967.1 51596776 2954265 complement(2899666..2900484) 1 NC_006155.1 catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2900484 aroE 2954265 aroE Yersinia pseudotuberculosis IP 32953 shikimate 5-dehydrogenase YP_070967.1 2899666 R 273123 CDS YP_070968.1 51596777 2954266 2900644..2900910 1 NC_006155.1 similar to Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (36.9% evalue=1.E-07); Escherichia coli Z2978 replication protein for prophage CP-933T (37.3% evalue=1.E-07); phage replication protein gene fragment 2900910 2954266 YPTB2455 Yersinia pseudotuberculosis IP 32953 phage replication protein gene fragment YP_070968.1 2900644 D 273123 CDS YP_070969.1 51596778 2954267 2901382..2901567 1 NC_006155.1 hypothetical protein 2901567 2954267 YPTB2456 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070969.1 2901382 D 273123 CDS YP_070970.1 51596779 2954268 complement(2901687..2902217) 1 NC_006155.1 hypothetical protein 2902217 2954268 YPTB2457 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070970.1 2901687 R 273123 CDS YP_070971.1 51596780 2954269 complement(2902330..2903445) 1 NC_006155.1 similar to Pyrococcus furiosus C2133PF1167 smc-like (22% evalue=4.E-07); C. perfringens CPE1884 hypothetical protein (23.1% evalue=4.E-07); hypothetical protein 2903445 2954269 YPTB2458 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070971.1 2902330 R 273123 CDS YP_070972.1 51596781 2954270 complement(2903918..2905096) 1 NC_006155.1 hypothetical protein 2905096 2954270 YPTB2459 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070972.1 2903918 R 273123 CDS YP_070973.1 51596782 2954271 complement(2905610..2906083) 1 NC_006155.1 similar to Salmonella typhi STY4628 probable capsid portal protein (52.4% evalue=7.E-41); Ralstonia solanacearum RS03510 probable bacteriophage protein (59.1% evalue=2.E-41); capsid portal protein 2906083 2954271 YPTB2460 Yersinia pseudotuberculosis IP 32953 capsid portal protein YP_070973.1 2905610 R 273123 CDS YP_070974.1 51596783 2954272 2906112..2906390 1 NC_006155.1 hypothetical protein 2906390 2954272 YPTB2461 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070974.1 2906112 D 273123 CDS YP_070975.1 51596784 2954273 2906975..2907220 1 NC_006155.1 similar to Yersinia pestis YPO1877 hypothetical protein (38.8% evalue=9.E-08); hypothetical protein 2907220 2954273 YPTB2462 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070975.1 2906975 D 273123 CDS YP_070976.1 51596785 2956360 complement(2907773..2909206) 1 NC_006155.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC 2909206 ptsG 2956360 ptsG Yersinia pseudotuberculosis IP 32953 PTS system glucose-specific transporter subunit IIBC YP_070976.1 2907773 R 273123 CDS YP_070977.1 51596786 2954274 complement(2909512..2910321) 1 NC_006155.1 similar to Yersinia pestis YPO1607 deoxyribonuclease (100% evalue=1.E-153); Salmonella typhimurium STM1202 ycfH; deoxyribonuclease (77.5% evalue=1.E-112); metallodependent hydrolase 2910321 2954274 YPTB2464 Yersinia pseudotuberculosis IP 32953 metallodependent hydrolase YP_070977.1 2909512 R 273123 CDS YP_070978.1 51596787 2955819 complement(2910336..2911358) 1 NC_006155.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2911358 holB 2955819 holB Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit delta' YP_070978.1 2910336 R 273123 CDS YP_070979.1 51596788 2956709 complement(2911358..2911996) 1 NC_006155.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2911996 tmk 2956709 tmk Yersinia pseudotuberculosis IP 32953 thymidylate kinase YP_070979.1 2911358 R 273123 CDS YP_070980.1 51596789 2956978 complement(2911986..2913011) 1 NC_006155.1 similar to Yersinia pestis YPO1604 yceG; exported protein (99.4% evalue=0); Escherichia coli b1097 yceG; hypothetical 38.2 kD protein in pABC-holB intergenic region (63.1% evalue=1.E-117); hypothetical protein 2913011 yceG 2956978 yceG Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070980.1 2911986 R 273123 CDS YP_070981.1 51596790 2956205 complement(2913300..2914106) 1 NC_006155.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 2914106 pabC 2956205 pabC Yersinia pseudotuberculosis IP 32953 4-amino-4-deoxychorismate lyase YP_070981.1 2913300 R 273123 CDS YP_070982.1 51596791 2955516 complement(2914469..2915710) 1 NC_006155.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 2915710 fabF 2955516 fabF Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP synthase YP_070982.1 2914469 R 273123 CDS YP_070983.1 51596792 2955168 complement(2915805..2916041) 1 NC_006155.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2916041 acpP 2955168 acpP Yersinia pseudotuberculosis IP 32953 acyl carrier protein YP_070983.1 2915805 R 273123 CDS YP_070984.1 51596793 2955518 complement(2916195..2916929) 1 NC_006155.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2916929 fabG 2955518 fabG Yersinia pseudotuberculosis IP 32953 3-ketoacyl-ACP reductase YP_070984.1 2916195 R 273123 CDS YP_070985.1 51596794 2955515 complement(2916943..2917872) 1 NC_006155.1 similar to Yersinia pestis YPO1598 fabD, tfpA; malonyl CoA-acyl carrier protein transacylase (100% evalue=1.E-172); Salmonella typhimurium STM1194 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase (79.8% evalue=1.E-139); ACP S-malonyltransferase 2917872 fabD 2955515 fabD Yersinia pseudotuberculosis IP 32953 ACP S-malonyltransferase YP_070985.1 2916943 R 273123 CDS YP_070986.1 51596795 2955519 complement(2917910..2918860) 1 NC_006155.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2918860 fabH 2955519 fabH Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP synthase YP_070986.1 2917910 R 273123 CDS YP_070987.1 51596796 2956279 complement(2918867..2919901) 1 NC_006155.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 2919901 plsX 2956279 plsX Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate acyltransferase PlsX YP_070987.1 2918867 R 273123 CDS YP_070988.1 51596797 2956515 complement(2919935..2920102) 1 NC_006155.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2920102 rpmF 2956515 rpmF Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L32 YP_070988.1 2919935 R 273123 CDS YP_070989.1 51596798 2954275 complement(2920115..2920639) 1 NC_006155.1 similar to Yersinia pestis YPO1594 conserved hypothetical protein (100% evalue=2.E-95); Escherichia coli JW1074 yceD; Hypothetical protein (79.6% evalue=3.E-75); hypothetical protein 2920639 2954275 YPTB2476 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070989.1 2920115 R 273123 CDS YP_070990.2 161760571 2954276 2920781..2921377 1 NC_006155.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2921377 maf 2954276 maf Yersinia pseudotuberculosis IP 32953 Maf-like protein YP_070990.2 2920781 D 273123 CDS YP_070991.1 51596800 2956463 complement(2921500..2922462) 1 NC_006155.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C 2922462 rluC 2956463 rluC Yersinia pseudotuberculosis IP 32953 23S rRNA pseudouridylate synthase C YP_070991.1 2921500 R 273123 CDS YP_070992.1 51596801 2956469 2923037..2926729 1 NC_006155.1 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E 2926729 rne 2956469 rne Yersinia pseudotuberculosis IP 32953 ribonuclease E YP_070992.1 2923037 D 273123 CDS YP_070993.1 51596802 2954277 complement(2926777..2926893) 1 NC_006155.1 hypothetical protein 2926893 2954277 YPTB2480 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070993.1 2926777 R 273123 CDS YP_070994.1 51596803 2954278 complement(2926987..2927274) 1 NC_006155.1 similar to Yersinia pestis YPO1588 conserved hypothetical protein (100% evalue=9.E-48); Neisseria meningitidis NMB1575 conserved hypothetical protein (38.7% evalue=2.E-17); hypothetical protein 2927274 2954278 YPTB2481 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_070994.1 2926987 R 273123 CDS YP_070995.1 51596804 2956385 2927509..2928555 1 NC_006155.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2928555 pyrC 2956385 pyrC Yersinia pseudotuberculosis IP 32953 dihydroorotase YP_070995.1 2927509 D 273123 CDS YP_070996.1 51596805 2955459 2928868..2929113 1 NC_006155.1 similar to Yersinia pestis YPO1586 dinI; DNA-damage-inducible protein I (100% evalue=7.E-40); Escherichia coli b1061 dinI; DNA-damage-inducible protein I (62.9% evalue=2.E-22); DNA damage-inducible protein I 2929113 dinI 2955459 dinI Yersinia pseudotuberculosis IP 32953 DNA damage-inducible protein I YP_070996.1 2928868 D 273123 CDS YP_070997.1 51596806 2956980 2929619..2929873 1 NC_006155.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 2929873 bssS 2956980 bssS Yersinia pseudotuberculosis IP 32953 biofilm formation regulatory protein BssS YP_070997.1 2929619 D 273123 CDS YP_070998.1 51596807 2956622 2930124..2931239 1 NC_006155.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 2931239 solA 2956622 solA Yersinia pseudotuberculosis IP 32953 N-methyltryptophan oxidase YP_070998.1 2930124 D 273123 CDS YP_070999.1 51596808 2954279 2931506..2932090 1 NC_006155.1 similar to Yersinia pestis YPO2449 LuxR-family regulatory protein (95% evalue=1.E-108); Salmonella typhimurium STM4337 ecnR; bacterial regulatory protein, luxR family (29.4% evalue=8.E-13); LuxR family transcriptional regulator 2932090 2954279 YPTB2486 Yersinia pseudotuberculosis IP 32953 LuxR family transcriptional regulator YP_070999.1 2931506 D 273123 CDS YP_071000.1 51596809 2954280 complement(2932662..2933720) 1 NC_006155.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; transporter 2933720 tqsA 2954280 tqsA Yersinia pseudotuberculosis IP 32953 transporter YP_071000.1 2932662 R 273123 CDS YP_071001.1 51596810 2954281 complement(2933869..2934936) 1 NC_006155.1 similar to Yersinia pestis YPO2451 conserved hypothetical protein (100% evalue=0); Escherichia coli JW1042 yceA; Hypothetical protein (ORF39.9) (73.8% evalue=1.E-158); hypothetical protein 2934936 2954281 YPTB2488 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071001.1 2933869 R 273123 CDS YP_071002.1 51596811 2954282 complement(2935295..2935699) 1 NC_006155.1 similar to Yersinia pestis YPO2453 membrane protein (99.1% evalue=3.E-64); hypothetical protein 2935699 2954282 YPTB2489 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071002.1 2935295 R 273123 CDS YP_071003.1 51596812 2955847 2936394..2937314 1 NC_006155.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2937314 htrB 2955847 htrB Yersinia pseudotuberculosis IP 32953 lipid A biosynthesis lauroyl acyltransferase YP_071003.1 2936394 D 273123 CDS YP_071004.1 51596813 2956977 2938011..2939549 1 NC_006155.1 similar to Listeria innocua lin0564 similar to di-tripeptide transporter (37.6% evalue=6.E-84); Bacillus subtilis BG12027 yclF; di-tripeptide transport system permease (36.2% evalue=2.E-89); proton dependent di-tripeptide transporter 2939549 yceE 2956977 yceE Yersinia pseudotuberculosis IP 32953 proton dependent di-tripeptide transporter YP_071004.1 2938011 D 273123 CDS YP_071005.1 51596814 2954283 complement(2939796..2940128) 1 NC_006155.1 similar to Escherichia coli ECs1428 hypothetical protein (64.8% evalue=6.E-27); Escherichia coli Z1685 yceK; orf; Unknown function (64.8% evalue=6.E-27); hypothetical protein 2940128 2954283 YPTB2492 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071005.1 2939796 R 273123 CDS YP_071006.1 51596815 2956010 complement(2940161..2942770) 1 NC_006155.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2942770 mdoH 2956010 mdoH Yersinia pseudotuberculosis IP 32953 glucosyltransferase MdoH YP_071006.1 2940161 R 273123 CDS YP_071007.1 51596816 2956009 complement(2942763..2944349) 1 NC_006155.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2944349 mdoG 2956009 mdoG Yersinia pseudotuberculosis IP 32953 glucan biosynthesis protein G YP_071007.1 2942763 R 273123 CDS YP_071008.1 51596817 2954285 2945778..2946023 1 NC_006155.1 hypothetical protein 2946023 2954285 YPTB2496 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071008.1 2945778 D 273123 CDS YP_071009.1 51596818 2954286 2946367..2948094 1 NC_006155.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 2948094 2954286 YPTB2497 Yersinia pseudotuberculosis IP 32953 potassium/proton antiporter YP_071009.1 2946367 D 273123 CDS YP_071010.1 51596819 2954287 complement(2948226..2949152) 1 NC_006155.1 similar to Yersinia pestis YPO2455 membrane protein (99% evalue=1.E-119); Salmonella typhimurium STM4395 yifZ; permease (71.9% evalue=1.E-119); DMT superfamliy metabolite exporter 2949152 2954287 YPTB2498 Yersinia pseudotuberculosis IP 32953 DMT superfamliy metabolite exporter YP_071010.1 2948226 R 273123 CDS YP_071011.1 51596820 2957108 2949583..2950227 1 NC_006155.1 similar to Yersinia pestis YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI (100% evalue=1.E-121); N-acylhomoserine lactone synthase 2950227 ypsI 2957108 ypsI Yersinia pseudotuberculosis IP 32953 N-acylhomoserine lactone synthase YP_071011.1 2949583 D 273123 CDS YP_071012.1 51596821 2957109 complement(2950220..2950957) 1 NC_006155.1 similar to Yersinia pestis YPO2457 ypeR; quorum-sensing transcriptional activator YpeR (100% evalue=1.E-139); quorum-sensing transcriptional activator YpeR 2950957 ypsR 2957109 ypsR Yersinia pseudotuberculosis IP 32953 quorum-sensing transcriptional activator YpeR YP_071012.1 2950220 R 273123 CDS YP_071013.1 51596822 2954288 complement(2951375..2952301) 1 NC_006155.1 similar to Yersinia pestis YPO2458 LysR-family transcriptional regulator (99.3% evalue=1.E-174); Caulobacter crescentus CC1117 transcriptional regulator, LysR family (34.1% evalue=5.E-33); LysR family transcriptional regulator 2952301 2954288 YPTB2501 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071013.1 2951375 R 273123 CDS YP_071014.1 51596823 2954289 2952749..2954107 1 NC_006155.1 similar to Yersinia pestis YPO2459 transporter protein (99.7% evalue=0); Escherichia coli JW2741 ygcS; Hypothetical metabolite transport protein (62.1% evalue=1.E-157); MFS superfamily sugar transporter 2954107 2954289 YPTB2502 Yersinia pseudotuberculosis IP 32953 MFS superfamily sugar transporter YP_071014.1 2952749 D 273123 CDS YP_071015.1 51596824 2954290 2954154..2954657 1 NC_006155.1 similar to Yersinia pestis YPO2460 conserved hypothetical protein (99.4% evalue=2.E-93); A. fulgidus AF1305 hps-2; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (32.7% evalue=8.E-23); hypothetical protein 2954657 2954290 YPTB2503 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071015.1 2954154 D 273123 CDS YP_071016.1 51596825 2954291 2954668..2955687 1 NC_006155.1 similar to Yersinia pestis YPO2461 oxidoreductase (99.4% evalue=0); Listeria monocytogenes lmo2005 similar to oxidoreductase (45.3% evalue=1.E-72); oxidoreductase 2955687 2954291 YPTB2504 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_071016.1 2954668 D 273123 CDS YP_071017.1 51596826 2954292 complement(2955765..2956319) 1 NC_006155.1 similar to Yersinia pestis YPO2462 conserved hypothetical protein (100% evalue=1.E-102); Pasteurella multocida PM0308 unknown (32.6% evalue=3.E-17); hypothetical protein 2956319 2954292 YPTB2505 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071017.1 2955765 R 273123 CDS YP_071018.1 51596827 2954293 complement(2956330..2957334) 1 NC_006155.1 similar to Yersinia pestis YPO2463 conserved hypothetical protein (99.7% evalue=0); Pasteurella multocida PM0307 unknown (55% evalue=3.E-94); hypothetical protein 2957334 2954293 YPTB2506 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071018.1 2956330 R 273123 CDS YP_071019.1 51596828 2954294 complement(2957352..2958302) 1 NC_006155.1 similar to Yersinia pestis YPO2464 conserved hypothetical protein (98.1% evalue=0); Pasteurella multocida PM0306 unknown (32.8% evalue=2.E-34); hypothetical protein 2958302 2954294 YPTB2507 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071019.1 2957352 R 273123 CDS YP_071020.1 51596829 2954295 complement(2958299..2959645) 1 NC_006155.1 similar to Yersinia pestis YPO2465 conserved hypothetical protein (81.2% evalue=0); Pasteurella multocida PM0305 unknown (26.9% evalue=7.E-30); hypothetical protein 2959645 2954295 YPTB2508 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071020.1 2958299 R 273123 CDS YP_071021.1 51596830 2954296 complement(2959801..2963091) 1 NC_006155.1 similar to Yersinia pestis YPO2467 conserved hypothetical protein (99.2% evalue=0); Pasteurella multocida PM0312 unknown (42.7% evalue=0); hypothetical protein 2963091 2954296 YPTB2509 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071021.1 2959801 R 273123 CDS YP_071022.1 51596831 2954297 complement(2963088..2964074) 1 NC_006155.1 similar to Yersinia pestis YPO2468 conserved hypothetical protein (99% evalue=0); Pasteurella multocida PM0311 unknown (57.7% evalue=1.E-103); hypothetical protein 2964074 2954297 YPTB2510 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071022.1 2963088 R 273123 CDS YP_071023.1 51596832 2954298 2965756..2967000 1 NC_006155.1 similar to Yersinia pestis YPO2470 membrane protein (99.7% evalue=0); Salmonella typhi STY0618 ybdG; membrane protein (63.1% evalue=1.E-150); mechanosensitive ion channel protein MscS 2967000 2954298 YPTB2511 Yersinia pseudotuberculosis IP 32953 mechanosensitive ion channel protein MscS YP_071023.1 2965756 D 273123 CDS YP_071024.1 51596833 2954299 complement(2967559..2968833) 1 NC_006155.1 similar to Yersinia pestis YPO2471 exported protein (99.7% evalue=0); hypothetical protein 2968833 2954299 YPTB2512 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071024.1 2967559 R 273123 CDS YP_071025.1 51596834 2954300 complement(2968872..2969987) 1 NC_006155.1 similar to Yersinia pestis YPO2472 exported protein (99.7% evalue=0); hypothetical protein 2969987 2954300 YPTB2513 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071025.1 2968872 R 273123 CDS YP_071026.1 51596835 2954301 complement(2970110..2971048) 1 NC_006155.1 similar to Yersinia pestis YPO2473 hypothetical protein (97.7% evalue=0); Listeria monocytogenes lmo0863 lmo0863 (47.3% evalue=3.E-70); hypothetical protein 2971048 2954301 YPTB2514 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071026.1 2970110 R 273123 CDS YP_071027.1 51596836 2954302 complement(2971075..2972130) 1 NC_006155.1 similar to Yersinia pestis YPO2474 conserved hypothetical protein (99.7% evalue=0); Listeria monocytogenes lmo0864 lmo0864 (47.1% evalue=1.E-92); hypothetical protein 2972130 2954302 YPTB2515 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071027.1 2971075 R 273123 CDS YP_071028.1 51596837 2954303 complement(2972277..2973101) 1 NC_006155.1 similar to Yersinia pestis YPO2475 sugar ABC transporter, permease (100% evalue=1.E-152); Thermotoga maritima TM1853 multiple sugar transport system permease (52.9% evalue=4.E-86); sugar ABC transporter permease 2973101 2954303 YPTB2516 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071028.1 2972277 R 273123 CDS YP_071029.1 51596838 2954304 complement(2973102..2973977) 1 NC_006155.1 similar to Yersinia pestis YPO2476 sugar ABC transporter, permease (99.3% evalue=1.E-164); Thermotoga maritima TM1854 multiple sugar transport system permease (54.5% evalue=9.E-96); sugar ABC transporter permease 2973977 2954304 YPTB2517 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071029.1 2973102 R 273123 CDS YP_071030.1 51596839 2954305 complement(2974086..2975372) 1 NC_006155.1 similar to Yersinia pestis YPO2477 solute-binding protein (99.7% evalue=0); Thermotoga maritima TM1855 multiple sugar transport system substrate-binding protein (50% evalue=1.E-114); sugar ABC transporter substrate-binding protein 2975372 2954305 YPTB2518 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_071030.1 2974086 R 273123 CDS YP_071031.1 51596840 2954306 2975644..2976684 1 NC_006155.1 similar to Yersinia pestis YPO2478 LacI-family transcriptional regulatory protein (100% evalue=0); Mycobacterium tuberculosis Rv3575c hypothetical protein Rv3575c (34.2% evalue=6.E-46); LacI family transcriptional regulator 2976684 2954306 YPTB2519 Yersinia pseudotuberculosis IP 32953 LacI family transcriptional regulator YP_071031.1 2975644 D 273123 CDS YP_071032.1 51596841 2955995 2976701..2978089 1 NC_006155.1 similar to Yersinia pestis YPO2479 manB, rfbK, rfbK2; phosphomannomutase (100% evalue=0); Salmonella typhimurium STM2104 cpsG; phosphomannomutase in colanic acid gene cluster (61.8% evalue=1.E-163); phosphomannomutase 2978089 manB 2955995 manB Yersinia pseudotuberculosis IP 32953 phosphomannomutase YP_071032.1 2976701 D 273123 CDS YP_071033.1 51596842 2956091 2978189..2979268 1 NC_006155.1 similar to Yersinia pestis YPO2480 mtlK; mannitol transport ATP-binding protein (99.7% evalue=0); Agrobacterium tumefaciens AGR_L_3324 lacK; lactose transport ATP-binding protein LacK (49.7% evalue=9.E-93); sugar ABC transporter ATP-binding protein 2979268 mtlK 2956091 mtlK Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_071033.1 2978189 D 273123 CDS YP_071034.1 51596843 2954307 complement(2979533..2980063) 1 NC_006155.1 similar to Yersinia pestis YPO2481 exported protein (100% evalue=4.E-95); hypothetical protein 2980063 2954307 YPTB2522 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071034.1 2979533 R 273123 CDS YP_071035.1 51596844 2954310 complement(2982148..2982399) 1 NC_006155.1 similar to Yersinia pestis YPO2488 hypothetical protein (97.5% evalue=1.E-43); hypothetical protein 2982399 2954310 YPTB2525 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071035.1 2982148 R 273123 CDS YP_071036.1 51596845 2954311 complement(2982644..2983153) 1 NC_006155.1 similar to Yersinia pestis YPO2489 conserved hypothetical protein (100% evalue=3.E-96); Neisseria meningitidis NMB0222 hypothetical protein (36.5% evalue=9.E-27); hypothetical protein 2983153 2954311 YPTB2526 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071036.1 2982644 R 273123 CDS YP_071037.2 161760570 2954312 complement(2983155..2990750) 1 NC_006155.1 similar to Yersinia pestis YPO2490 hemolysin (99.2% evalue=0); hemolysin 2990750 2954312 YPTB2527 Yersinia pseudotuberculosis IP 32953 hemolysin YP_071037.2 2983155 R 273123 CDS YP_071038.1 51596847 2954313 complement(2990905..2992593) 1 NC_006155.1 similar to Yersinia pestis YPO2491 hemolysin activator protein (99.8% evalue=0); hemolysin activator/exporter 2992593 2954313 YPTB2528 Yersinia pseudotuberculosis IP 32953 hemolysin activator/exporter YP_071038.1 2990905 R 273123 CDS YP_071039.1 51596848 2954314 complement(2993248..2994213) 1 NC_006155.1 similar to Yersinia pestis YPO2492 dioxygenase beta subunit (99.6% evalue=0); Escherichia coli JW1792 yeaX; dioxygenase alpha subunit (58.8% evalue=1.E-105); dioxygenase subunit beta 2994213 2954314 YPTB2529 Yersinia pseudotuberculosis IP 32953 dioxygenase subunit beta YP_071039.1 2993248 R 273123 CDS YP_071040.1 51596849 2954315 complement(2994309..2995433) 1 NC_006155.1 similar to Yersinia pestis YPO2493 dioxygenase alpha subunit (100% evalue=0); Escherichia coli JW1791 yeaW; dioxygenase alpha subunit (82.6% evalue=0); dioxygenase subunit alpha 2995433 2954315 YPTB2530 Yersinia pseudotuberculosis IP 32953 dioxygenase subunit alpha YP_071040.1 2994309 R 273123 CDS YP_071041.2 161760569 2954316 complement(2995550..2997016) 1 NC_006155.1 member of the betaine, carnitine, choline transporter (BCCT) family; unknown function; transporter 2997016 2954316 YPTB2531 Yersinia pseudotuberculosis IP 32953 transporter YP_071041.2 2995550 R 273123 CDS YP_071042.1 51596851 2954317 complement(2997799..2998884) 1 NC_006155.1 similar to Yersinia pestis YPO2496 tartrate dehydrogenase (100% evalue=0); Escherichia coli b1800 yeaU; probable tartrate dehydrogenase (81.3% evalue=1.E-174); tartrate dehydrogenase 2998884 2954317 YPTB2532 Yersinia pseudotuberculosis IP 32953 tartrate dehydrogenase YP_071042.1 2997799 R 273123 CDS YP_071043.1 51596852 2954318 2998987..2999928 1 NC_006155.1 similar to Yersinia pestis YPO2497 LlysR-family transcriptional regulatory protein (99.6% evalue=1.E-179); Escherichia coli Z2842 yeaT; transcriptional regulator LYSR-type (74.5% evalue=1.E-130); LysR family transcriptional regulator 2999928 2954318 YPTB2533 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071043.1 2998987 D 273123 CDS YP_071044.1 51596853 2954319 3000300..3001304 1 NC_006155.1 similar to Yersinia pestis YPO2498 LacI-family transcriptional regulatory protein (99.4% evalue=0); Escherichia coli ECs4695 regulator for rbs operon (27.7% evalue=9.E-28); LacI family transcriptional regulatory protein 3001304 2954319 YPTB2534 Yersinia pseudotuberculosis IP 32953 LacI family transcriptional regulatory protein YP_071044.1 3000300 D 273123 CDS YP_071045.1 51596854 2954320 complement(3001437..3002429) 1 NC_006155.1 similar to Yersinia pestis YPO2499 rbsC; sugar transport system, permease (100% evalue=0); Agrobacterium tumefaciens AGR_L_1078 ribose ABC transporter (permease) (59% evalue=3.E-99); sugar (sorbitol) ABC transporter permease 3002429 2954320 YPTB2535 Yersinia pseudotuberculosis IP 32953 sugar (sorbitol) ABC transporter permease YP_071045.1 3001437 R 273123 CDS YP_071046.1 51596855 2954321 complement(3002426..3003916) 1 NC_006155.1 similar to Yersinia pestis YPO2500 rbsA; sugar transport system, ATP-binding protein (98.7% evalue=0); Agrobacterium tumefaciens Atu4321 rbsA; ABC transporter, nucleotide binding/ATPase [ribose] (58.3% evalue=1.E-152); sugar (sorbitol) ABC transporter ATP-binding protein 3003916 2954321 YPTB2536 Yersinia pseudotuberculosis IP 32953 sugar (sorbitol) ABC transporter ATP-binding protein YP_071046.1 3002426 R 273123 CDS YP_071047.1 51596856 2954322 complement(3003973..3004890) 1 NC_006155.1 similar to Yersinia pestis YPO2501 rbsB; sugar binding protein precursor (99.3% evalue=1.E-166); Agrobacterium tumefaciens Atu4320 rbsB; ABC transporter, substrate binding protein [ribose] (59.4% evalue=3.E-97); sugar ABC transporter substrate-binding protein 3004890 2954322 YPTB2537 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_071047.1 3003973 R 273123 CDS YP_071048.1 51596857 2955765 complement(3005065..3006291) 1 NC_006155.1 similar to Yersinia pestis YPO3352 ydjJ; Zinc-binding dehydrogenase (52% evalue=1.E-110); sorbitol dehydrogenase 3006291 gutB 2955765 gutB Yersinia pseudotuberculosis IP 32953 sorbitol dehydrogenase YP_071048.1 3005065 R 273123 CDS YP_071049.1 51596858 2954323 complement(3006939..3007601) 1 NC_006155.1 similar to Yersinia pestis YPO2504 hypothetical protein (27.2% evalue=4.E-11); hypothetical protein 3007601 2954323 YPTB2539 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071049.1 3006939 R 273123 CDS YP_071050.1 51596859 2954324 complement(3007784..3008356) 1 NC_006155.1 similar to Yersinia pestis YPO2504 hypothetical protein (61.7% evalue=2.E-56); hypothetical protein 3008356 2954324 YPTB2540 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071050.1 3007784 R 273123 CDS YP_071051.1 51596860 2954325 complement(3008594..3009532) 1 NC_006155.1 similar to Yersinia pestis YPO2505 membrane protein (99% evalue=1.E-176); Sinorhizobium meliloti SMa0683 hypothetical protein (40.2% evalue=6.E-64); CDF family Co+2/Zn+2/Cd+2 efflux protein 3009532 2954325 YPTB2541 Yersinia pseudotuberculosis IP 32953 CDF family Co+2/Zn+2/Cd+2 efflux protein YP_071051.1 3008594 R 273123 CDS YP_071052.1 51596861 2956193 complement(3009848..3010372) 1 NC_006155.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 3010372 ompX 2956193 ompX Yersinia pseudotuberculosis IP 32953 outer membrane protein X YP_071052.1 3009848 R 273123 CDS YP_071053.1 51596862 2954326 3010777..3011664 1 NC_006155.1 similar to Yersinia pestis YPO2507 membrane protein (100% evalue=1.E-162); Salmonella typhimurium STM0832 ybiF; permease (71.4% evalue=1.E-115); threonine and homoserine efflux system 3011664 2954326 YPTB2543 Yersinia pseudotuberculosis IP 32953 threonine and homoserine efflux system YP_071053.1 3010777 D 273123 CDS YP_071054.1 51596863 2954327 3011680..3012177 1 NC_006155.1 similar to Yersinia pestis YPO2508 conserved hypothetical protein (100% evalue=1.E-93); Anabaena all4397 acetyltransferase (32.5% evalue=6.E-18); hypothetical protein 3012177 2954327 YPTB2544 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071054.1 3011680 D 273123 CDS YP_071055.1 51596864 2956658 3012200..3012976 1 NC_006155.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 3012976 tam 2956658 tam Yersinia pseudotuberculosis IP 32953 trans-aconitate 2-methyltransferase YP_071055.1 3012200 D 273123 CDS YP_071056.1 51596865 2955484 3013234..3013737 1 NC_006155.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 3013737 dps 2955484 dps Yersinia pseudotuberculosis IP 32953 DNA starvation/stationary phase protection protein Dps YP_071056.1 3013234 D 273123 CDS YP_071057.1 51596866 2954328 3014057..3015184 1 NC_006155.1 similar to Yersinia pestis YPO2511 exported protein (100% evalue=0); Listeria innocua lin2536 lin2536 (27.1% evalue=2.E-07); hypothetical protein 3015184 2954328 YPTB2547 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071057.1 3014057 D 273123 CDS YP_071058.1 51596867 2955699 3015753..3016496 1 NC_006155.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 3016496 glnH 2955699 glnH Yersinia pseudotuberculosis IP 32953 glutamine ABC transporter periplasmic protein YP_071058.1 3015753 D 273123 CDS YP_071059.1 51596868 2955701 3016531..3017187 1 NC_006155.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3017187 glnP 2955701 glnP Yersinia pseudotuberculosis IP 32953 glutamine ABC transporter permease YP_071059.1 3016531 D 273123 CDS YP_071060.1 51596869 2955702 3017184..3017906 1 NC_006155.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 3017906 glnQ 2955702 glnQ Yersinia pseudotuberculosis IP 32953 glutamine ABC transporter ATP-binding protein YP_071060.1 3017184 D 273123 CDS YP_071061.1 51596870 2954329 complement(3018134..3019438) 1 NC_006155.1 similar to Yersinia pestis YPO2515 chemotactic transducer (98.5% evalue=0); Pseudomonas aeruginosa PA1423 probable chemotaxis transducer (41.5% evalue=7.E-90); chemotactic transducer 3019438 2954329 YPTB2551 Yersinia pseudotuberculosis IP 32953 chemotactic transducer YP_071061.1 3018134 R 273123 CDS YP_071062.1 51596871 2954330 complement(3019893..3020159) 1 NC_006155.1 hypothetical protein 3020159 2954330 YPTB2552 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071062.1 3019893 R 273123 CDS YP_071063.1 51596872 2954331 complement(3020223..3021233) 1 NC_006155.1 similar to Yersinia pestis YPO2519 conserved hypothetical protein (99.7% evalue=0); Escherichia coli JW0792 ybiN; Hypothetical protein (57% evalue=1.E-95); SAM-dependent methyltransferase 3021233 2954331 YPTB2553 Yersinia pseudotuberculosis IP 32953 SAM-dependent methyltransferase YP_071063.1 3020223 R 273123 CDS YP_071064.1 51596873 2954332 3021537..3021797 1 NC_006155.1 similar to Yersinia pestis YPO2521 exported protein (100% evalue=8.E-41); Salmonella typhimurium STM0823 ybiJ; periplasmic protein (59.3% evalue=6.E-21); hypothetical protein 3021797 2954332 YPTB2554 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071064.1 3021537 D 273123 CDS YP_071065.1 51596874 2956966 complement(3022179..3023138) 1 NC_006155.1 similar to Yersinia pestis YPO2522 ybiB; glycosyl transferase (99.3% evalue=1.E-178); Salmonella typhimurium STM0822 ybiB; transferase (60.1% evalue=1.E-103); glycosyl transferase family protein 3023138 ybiB 2956966 ybiB Yersinia pseudotuberculosis IP 32953 glycosyl transferase family protein YP_071065.1 3022179 R 273123 CDS YP_071066.1 51596875 2956015 complement(3023204..3024619) 1 NC_006155.1 similar to Yersinia pestis YPO2523 menE; O-succinylbenzoic acid--CoA ligase (99.5% evalue=0); Salmonella typhi STY2535 menE; O-succinylbenzoic acid-CoA ligase (57.2% evalue=1.E-144); O-succinylbenzoic acid--CoA ligase 3024619 menE 2956015 menE Yersinia pseudotuberculosis IP 32953 O-succinylbenzoic acid--CoA ligase YP_071066.1 3023204 R 273123 CDS YP_071067.1 51596876 2956013 complement(3024607..3025578) 1 NC_006155.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 3025578 menC 2956013 menC Yersinia pseudotuberculosis IP 32953 O-succinylbenzoate synthase YP_071067.1 3024607 R 273123 CDS YP_071068.1 51596877 2956012 complement(3025578..3026435) 1 NC_006155.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 3026435 menB 2956012 menB Yersinia pseudotuberculosis IP 32953 naphthoate synthase YP_071068.1 3025578 R 273123 CDS YP_071069.1 51596878 2954333 complement(3026449..3027267) 1 NC_006155.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase 3027267 2954333 YPTB2559 Yersinia pseudotuberculosis IP 32953 acyl-CoA thioester hydrolase YP_071069.1 3026449 R 273123 CDS YP_071070.1 51596879 2956014 complement(3027264..3028967) 1 NC_006155.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 3028967 menD 2956014 menD Yersinia pseudotuberculosis IP 32953 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_071070.1 3027264 R 273123 CDS YP_071071.2 161760568 2956016 complement(3029195..3030562) 1 NC_006155.1 synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase 3030562 menF 2956016 menF Yersinia pseudotuberculosis IP 32953 menaquinone-specific isochorismate synthase YP_071071.2 3029195 R 273123 CDS YP_071072.1 51596881 2954334 complement(3031107..3031751) 1 NC_006155.1 similar to Yersinia pestis YPO2530 conserved hypothetical protein (100% evalue=1.E-122); hypothetical protein 3031751 2954334 YPTB2562 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071072.1 3031107 R 273123 CDS YP_071073.1 51596882 2955500 complement(3032306..3032614) 1 NC_006155.1 similar to Yersinia pestis YPO2531 elaB; membrane protein (100% evalue=3.E-54); Escherichia coli b2266 elaB; elaB protein (50% evalue=2.E-21); hypothetical protein 3032614 elaB 2955500 elaB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071073.1 3032306 R 273123 CDS YP_071074.1 51596883 2954335 complement(3033266..3033478) 1 NC_006155.1 similar to Yersinia pestis YPO2532 hypothetical protein, 100 % identical.; hypothetical protein 3033478 2954335 YPTB2564 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071074.1 3033266 R 273123 CDS YP_071075.1 51596884 2955496 complement(3033544..3035460) 1 NC_006155.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3035460 edd 2955496 edd Yersinia pseudotuberculosis IP 32953 phosphogluconate dehydratase YP_071075.1 3033544 R 273123 CDS YP_071076.1 51596885 2954336 complement(3035470..3035985) 1 NC_006155.1 similar to Yersinia pestis YPO2534 conserved hypothetical protein (99.4% evalue=7.E-93); Sinorhizobium meliloti SMc03110 conserved hypothetical protein (40.1% evalue=6.E-31); hypothetical protein 3035985 2954336 YPTB2566 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071076.1 3035470 R 273123 CDS YP_071077.1 51596886 2954337 complement(3036015..3037331) 1 NC_006155.1 similar to Yersinia pestis YPO2535 sugar transporter (99.5% evalue=0); Pseudomonas aeruginosa PA2262 probable 2-ketogluconate transporter (32.6% evalue=1.E-64); 2-ketogluconate transporter 3037331 2954337 YPTB2567 Yersinia pseudotuberculosis IP 32953 2-ketogluconate transporter YP_071077.1 3036015 R 273123 CDS YP_071078.1 51596887 2954338 complement(3037877..3038827) 1 NC_006155.1 similar to Yersinia pestis YPO2536 D-isomer specific 2-hydroxyacid dehydrogenase family protein (98.7% evalue=1.E-173); Agrobacterium tumefaciens AGR_L_379 D-isomer specific 2-hydroxyacid dehydrogenase; 59386-58329 (44.9% evalue=7.E-73); D-isomer specific 2-hydroxyacid dehydrogenase family protein 3038827 2954338 YPTB2568 Yersinia pseudotuberculosis IP 32953 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_071078.1 3037877 R 273123 CDS YP_071079.1 51596888 2954339 complement(3039291..3040283) 1 NC_006155.1 similar to Yersinia pestis YPO2537 LacI-family transcriptional regulatory protein (99.3% evalue=0); Salmonella typhimurium STM4481 idnR; L-idonate regulator (GalR/LacI family) (50% evalue=2.E-91); LacI family transcriptional regulatory protein 3040283 2954339 YPTB2569 Yersinia pseudotuberculosis IP 32953 LacI family transcriptional regulatory protein YP_071079.1 3039291 R 273123 CDS YP_071080.1 51596889 2954340 3040769..3042073 1 NC_006155.1 similar to Yersinia pestis YPO2538 lipoprotein (98.8% evalue=0); Escherichia coli JW1486 hypothetical protein (59.7% evalue=1.E-154); lipoprotein 3042073 2954340 YPTB2570 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071080.1 3040769 D 273123 CDS YP_071081.1 51596890 2955866 3042812..3043576 1 NC_006155.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 3043576 idnO 2955866 idnO Yersinia pseudotuberculosis IP 32953 gluconate 5-dehydrogenase YP_071081.1 3042812 D 273123 CDS YP_071082.1 51596891 2955865 3043625..3044161 1 NC_006155.1 similar to Yersinia pestis YPO3953 gluconokinase (65.8% evalue=2.E-61); thermosensitive gluconokinase 3044161 idnK 2955865 idnK Yersinia pseudotuberculosis IP 32953 thermosensitive gluconokinase YP_071082.1 3043625 D 273123 CDS YP_071083.1 51596892 2954341 3044239..3044706 1 NC_006155.1 similar to Yersinia pestis YPO2541 conserved hypothetical protein (100% evalue=2.E-84); Salmonella typhimurium STM3669 yiaL; cytoplasmic protein (34.2% evalue=1.E-17); hypothetical protein 3044706 2954341 YPTB2573 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071083.1 3044239 D 273123 CDS YP_071084.1 51596893 2954342 complement(3045035..3046303) 1 NC_006155.1 similar to Yersinia pestis YPO2542 hypothetical protein (61.4% evalue=1.E-130); hypothetical protein 3046303 2954342 YPTB2574 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071084.1 3045035 R 273123 CDS YP_071085.1 51596894 2956179 complement(3046542..3048005) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 3048005 nuoN 2956179 nuoN Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit N YP_071085.1 3046542 R 273123 CDS YP_071086.1 51596895 2956178 complement(3048012..3049544) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 3049544 nuoM 2956178 nuoM Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit M YP_071086.1 3048012 R 273123 CDS YP_071087.1 51596896 2956177 complement(3049584..3051428) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 3051428 nuoL 2956177 nuoL Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit L YP_071087.1 3049584 R 273123 CDS YP_071088.1 51596897 2956176 complement(3051425..3051727) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 3051727 nuoK 2956176 nuoK Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit K YP_071088.1 3051425 R 273123 CDS YP_071089.1 51596898 2956175 complement(3051724..3052269) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 3052269 nuoJ 2956175 nuoJ Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit J YP_071089.1 3051724 R 273123 CDS YP_071090.1 51596899 2956174 complement(3052282..3052824) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3052824 nuoI 2956174 nuoI Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit I YP_071090.1 3052282 R 273123 CDS YP_071091.1 51596900 2956173 complement(3052839..3053816) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3053816 nuoH 2956173 nuoH Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit H YP_071091.1 3052839 R 273123 CDS YP_071092.1 51596901 2956172 complement(3053813..3056557) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3056557 nuoG 2956172 nuoG Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit G YP_071092.1 3053813 R 273123 CDS YP_071093.1 51596902 2956171 complement(3056644..3058029) 1 NC_006155.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3058029 nuoF 2956171 nuoF Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase I subunit F YP_071093.1 3056644 R 273123 CDS YP_071094.1 51596903 2956170 complement(3058026..3058589) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 3058589 nuoE 2956170 nuoE Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit E YP_071094.1 3058026 R 273123 CDS YP_071095.1 51596904 2956169 complement(3058592..3060388) 1 NC_006155.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; NADH:ubiquinone oxidoreductase subunit C/D 3060388 nuoD 2956169 nuoD Yersinia pseudotuberculosis IP 32953 NADH:ubiquinone oxidoreductase subunit C/D YP_071095.1 3058592 R 273123 CDS YP_071096.1 51596905 2956168 complement(3060531..3061208) 1 NC_006155.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3061208 nuoB 2956168 nuoB Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit B YP_071096.1 3060531 R 273123 CDS YP_071097.1 51596906 2956167 complement(3061310..3061810) 1 NC_006155.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 3061810 nuoA 2956167 nuoA Yersinia pseudotuberculosis IP 32953 NADH dehydrogenase subunit A YP_071097.1 3061310 R 273123 CDS YP_071098.1 51596907 2956227 complement(3062487..3063419) 1 NC_006155.1 similar to Yersinia pestis YPO2556 pecT, hexA; LysR-family transcriptional regulatory protein (100% evalue=1.E-174); Salmonella typhimurium STM2330 lrhA; NADH dehydrogenase transcriptional repressor (LysR family) (72% evalue=1.E-118); LysR family transcriptional regulator 3063419 pecT 2956227 pecT Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071098.1 3062487 R 273123 CDS YP_071099.1 51596908 2955154 3064275..3065489 1 NC_006155.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 3065489 aat 2955154 aat Yersinia pseudotuberculosis IP 32953 aminotransferase YP_071099.1 3064275 D 273123 CDS YP_071100.1 51596909 2954343 3065640..3066233 1 NC_006155.1 similar to Yersinia pestis YPO2559 conserved hypothetical protein (99.4% evalue=1.E-108); Escherichia coli ECs3175 alpha helix protein (80.9% evalue=9.E-86); hypothetical protein 3066233 2954343 YPTB2590 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071100.1 3065640 D 273123 CDS YP_071101.1 51596910 2954344 complement(3066280..3066591) 1 NC_006155.1 similar to Yersinia pestis YPO2560 exported protein (97.1% evalue=1.E-33); hypothetical protein 3066591 2954344 YPTB2591 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071101.1 3066280 R 273123 CDS YP_071102.1 51596911 2954345 complement(3066945..3068837) 1 NC_006155.1 similar to Yersinia pestis YPO2561 ion transport protein (99.6% evalue=0); Escherichia coli Z3553 yfbS; transport protein (71.4% evalue=0); sodium:sulfate symporter 3068837 2954345 YPTB2592 Yersinia pseudotuberculosis IP 32953 sodium:sulfate symporter YP_071102.1 3066945 R 273123 CDS YP_071103.2 161760567 2954346 complement(3069069..3069725) 1 NC_006155.1 similar to Yersinia pestis YPO2562 haloacid dehalogenase-like hydrolase (98.6% evalue=1.E-120); Escherichia coli ECs3177 phosphatase (71.9% evalue=6.E-85); phosphatase 3069725 2954346 YPTB2593 Yersinia pseudotuberculosis IP 32953 phosphatase YP_071103.2 3069069 R 273123 CDS YP_071104.1 51596913 2954347 complement(3069890..3070384) 1 NC_006155.1 similar to Yersinia pestis YPO2563 conserved hypothetical protein (100% evalue=4.E-93); Escherichia coli ECs3178 hypothetical protein (80.4% evalue=3.E-78); hypothetical protein 3070384 2954347 YPTB2594 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071104.1 3069890 R 273123 CDS YP_071105.1 51596914 2954348 complement(3070724..3071179) 1 NC_006155.1 similar to Yersinia pestis YPO2564 conserved hypothetical protein (99.3% evalue=3.E-85); Salmonella typhimurium STM2336 cytoplasmic protein (71.5% evalue=1.E-61); hypothetical protein 3071179 2954348 YPTB2595 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071105.1 3070724 R 273123 CDS YP_071106.1 51596915 2954349 3071420..3071611 1 NC_006155.1 similar to Yersinia pestis YPO2565 hypothetical protein, 98% identical.; hypothetical protein 3071611 2954349 YPTB2596 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071106.1 3071420 D 273123 CDS YP_071107.1 51596916 2955164 3071601..3072803 1 NC_006155.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3072803 ackA 2955164 ackA Yersinia pseudotuberculosis IP 32953 acetate kinase YP_071107.1 3071601 D 273123 CDS YP_071108.1 51596917 2956356 3072971..3075124 1 NC_006155.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3075124 pta 2956356 pta Yersinia pseudotuberculosis IP 32953 phosphate acetyltransferase YP_071108.1 3072971 D 273123 CDS YP_071109.1 51596918 2954350 complement(3075390..3076424) 1 NC_006155.1 similar to Yersinia pestis YPO2568 LacI-family transcriptional regulatory protein (99.7% evalue=0); Salmonella typhimurium STM2345 transcriptional regulator (41.4% evalue=8.E-67); LacI family transcriptional regulator 3076424 2954350 YPTB2599 Yersinia pseudotuberculosis IP 32953 LacI family transcriptional regulator YP_071109.1 3075390 R 273123 CDS YP_071110.1 51596919 2954351 3076791..3077234 1 NC_006155.1 similar to Yersinia pestis YPO2569 phosphotransferase enzyme II, A component (99.3% evalue=9.E-77); Salmonella typhi STY2574 sugar phosphotransferase component II A (44.8% evalue=3.E-32); PTS system mannitol transporter subunit IIA 3077234 2954351 YPTB2600 Yersinia pseudotuberculosis IP 32953 PTS system mannitol transporter subunit IIA YP_071110.1 3076791 D 273123 CDS YP_071111.1 51596920 2954352 3077403..3077690 1 NC_006155.1 similar to Salmonella typhimurium STM2343 sugar phosphotransferase component IIB (42.5% evalue=1.E-13); C. perfringens CPE0522 PTS system, mannitol-specific II component (39.3% evalue=3.E-14); PTS system mannitol/pentitol transporter subunit IIB 3077690 2954352 YPTB2601 Yersinia pseudotuberculosis IP 32953 PTS system mannitol/pentitol transporter subunit IIB YP_071111.1 3077403 D 273123 CDS YP_071112.1 51596921 2954353 3077703..3078959 1 NC_006155.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 3078959 ulaA 2954353 ulaA Yersinia pseudotuberculosis IP 32953 PTS system ascorbate-specific transporter subunit IIC YP_071112.1 3077703 D 273123 CDS YP_071113.1 51596922 2954354 complement(3079076..3079624) 1 NC_006155.1 similar to Yersinia pestis YPO2781 conserved hypothetical protein (100% evalue=1.E-104); Salmonella typhi STY2576 conserved hypothetical protein (81.5% evalue=3.E-79); hypothetical protein 3079624 2954354 YPTB2603 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071113.1 3079076 R 273123 CDS YP_071114.1 51596923 2954355 complement(3079846..3080397) 1 NC_006155.1 similar to Yersinia pestis YPO2780 conserved hypothetical protein (93% evalue=5.E-90); Escherichia coli b2300 yfcE; hypothetical 20.1 kD protein in PTA-folX intergenic region (69% evalue=4.E-69); phosphodiesterase 3080397 2954355 YPTB2604 Yersinia pseudotuberculosis IP 32953 phosphodiesterase YP_071114.1 3079846 R 273123 CDS YP_071115.1 51596924 2954356 complement(3080585..3081283) 1 NC_006155.1 similar to Yersinia pestis YPO2779 conserved hypothetical protein (98.7% evalue=1.E-130); Salmonella typhi STY1354 conserved hypothetical protein (33.7% evalue=2.E-28); hypothetical protein 3081283 2954356 YPTB2605 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071115.1 3080585 R 273123 CDS YP_071116.1 51596925 2954357 3081631..3082539 1 NC_006155.1 similar to Yersinia pestis YPO2778 conserved hypothetical protein (100% evalue=1.E-174); Escherichia coli JW2301 hypothetical protein (68.7% evalue=1.E-117); hypothetical protein 3082539 2954357 YPTB2606 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071116.1 3081631 D 273123 CDS YP_071117.1 51596926 2955799 complement(3082663..3083460) 1 NC_006155.1 similar to Yersinia pestis YPO2777 hisP; histidine transport ATP-binding protein HisP (99.6% evalue=1.E-146); Escherichia coli ECs3190 ATP-binding component of histidine transport (86.7% evalue=1.E-122); histidine/lysine/arginine/ornithine transporter subunit 3083460 hisP 2955799 hisP Yersinia pseudotuberculosis IP 32953 histidine/lysine/arginine/ornithine transporter subunit YP_071117.1 3082663 R 273123 CDS YP_071118.1 51596927 2955798 complement(3083474..3084190) 1 NC_006155.1 similar to Yersinia pestis YPO2776 hisM; histidine transport system permease HisM (100% evalue=1.E-133); Escherichia coli ECs3191 histidine transport system membrane protein M (81.5% evalue=1.E-113); histidine ABC transporter permease HisM 3084190 hisM 2955798 hisM Yersinia pseudotuberculosis IP 32953 histidine ABC transporter permease HisM YP_071118.1 3083474 R 273123 CDS YP_071119.1 51596928 2955800 complement(3084187..3084873) 1 NC_006155.1 similar to Yersinia pestis YPO2775 hisQ; histidine transport system permease HisQ (100% evalue=1.E-125); Escherichia coli JW2305 hisQ; Histidine transport system permease HisQ (77.6% evalue=5.E-97); histidine ABC transporter permease HisQ 3084873 hisQ 2955800 hisQ Yersinia pseudotuberculosis IP 32953 histidine ABC transporter permease HisQ YP_071119.1 3084187 R 273123 CDS YP_071120.1 51596929 2955797 complement(3084969..3085751) 1 NC_006155.1 similar to Yersinia pestis YPO2774 hisJ; histidine-binding periplasmic protein (100% evalue=1.E-144); Escherichia coli JW2306 hisJ; Histidine-binding periplasmic protein precursor (hbp) (76.4% evalue=1.E-112); histidine ABC transporter substrate-binding protein HisJ 3085751 hisJ 2955797 hisJ Yersinia pseudotuberculosis IP 32953 histidine ABC transporter substrate-binding protein HisJ YP_071120.1 3084969 R 273123 CDS YP_071121.1 51596930 2956856 complement(3086294..3086866) 1 NC_006155.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3086866 ubiX 2956856 ubiX Yersinia pseudotuberculosis IP 32953 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_071121.1 3086294 R 273123 CDS YP_071122.1 51596931 2956371 complement(3087113..3088630) 1 NC_006155.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3088630 purF 2956371 purF Yersinia pseudotuberculosis IP 32953 amidophosphoribosyltransferase YP_071122.1 3087113 R 273123 CDS YP_071123.1 51596932 2955382 complement(3088643..3089152) 1 NC_006155.1 membrane protein required for colicin V production; colicin V production protein 3089152 cvpA 2955382 cvpA Yersinia pseudotuberculosis IP 32953 colicin V production protein YP_071123.1 3088643 R 273123 CDS YP_071124.1 51596933 2955445 complement(3089464..3090186) 1 NC_006155.1 similar to Yersinia pestis YPO2770 dedD; membrane protein (99.5% evalue=1.E-132); Escherichia coli Z3576 dedD; lipoprotein (56.7% evalue=2.E-62); hypothetical protein 3090186 dedD 2955445 dedD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071124.1 3089464 R 273123 CDS YP_071125.1 51596934 2955632 complement(3090306..3091610) 1 NC_006155.1 similar to Yersinia pestis YPO2769 folC, dedC; dihydrofolate synthase / folylpolyglutamate synthase (100% evalue=0); Salmonella typhimurium STM2365 folC (65.2% evalue=1.E-156); bifunctional folylpolyglutamate synthase/dihydrofolate synthase 3091610 folC 2955632 folC Yersinia pseudotuberculosis IP 32953 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_071125.1 3090306 R 273123 CDS YP_071126.1 51596935 2955158 complement(3091859..3092773) 1 NC_006155.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3092773 accD 2955158 accD Yersinia pseudotuberculosis IP 32953 acetyl-CoA carboxylase subunit beta YP_071126.1 3091859 R 273123 CDS YP_071127.1 51596936 2955444 complement(3093004..3093666) 1 NC_006155.1 similar to Yersinia pestis YPO2767 dedA; membrane protein (100% evalue=1.E-122); Salmonella typhimurium STM2367 dedA; DedA family (85.1% evalue=1.E-105); hypothetical protein 3093666 dedA 2955444 dedA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071127.1 3093004 R 273123 CDS YP_071128.1 51596937 2956834 complement(3093823..3094722) 1 NC_006155.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 3094722 truA 2956834 truA Yersinia pseudotuberculosis IP 32953 tRNA pseudouridine synthase A YP_071128.1 3093823 R 273123 CDS YP_071129.1 51596938 2955241 complement(3094722..3095732) 1 NC_006155.1 similar to Yersinia pestis YPO2765 asd, usg-1; aspartate-semialdehyde dehydrogenase (100% evalue=0); Salmonella typhi STY2600 usg; semialdehyde dehydrogenase (71.5% evalue=1.E-136); semialdehyde dehydrogenase 3095732 asd 2955241 asd Yersinia pseudotuberculosis IP 32953 semialdehyde dehydrogenase YP_071129.1 3094722 R 273123 CDS YP_071130.1 51596939 2956223 complement(3095902..3097089) 1 NC_006155.1 catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase 3097089 pdxB 2956223 pdxB Yersinia pseudotuberculosis IP 32953 erythronate-4-phosphate dehydrogenase YP_071130.1 3095902 R 273123 CDS YP_071131.1 51596940 2954358 complement(3097076..3097861) 1 NC_006155.1 similar to Yersinia pestis YPO2762 AraC-family regulatory protein (99.2% evalue=1.E-148); Vibrio cholerae VCA0937 transcriptional regulator, AraC/XylS family (46% evalue=2.E-61); AraC family transcriptional regulator 3097861 2954358 YPTB2621 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_071131.1 3097076 R 273123 CDS YP_071132.1 51596941 2954359 3098045..3098962 1 NC_006155.1 similar to Yersinia pestis YPO2761 membrane protein (99.3% evalue=1.E-169); Agrobacterium tumefaciens Atu5339 conserved hypothetical protein (46.9% evalue=6.E-71); DMT superfamily drug/metabolite efflux protein 3098962 2954359 YPTB2622 Yersinia pseudotuberculosis IP 32953 DMT superfamily drug/metabolite efflux protein YP_071132.1 3098045 D 273123 CDS YP_071133.1 51596942 2955626 3099247..3100284 1 NC_006155.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 3100284 flk 2955626 flk Yersinia pseudotuberculosis IP 32953 flagella biosynthesis regulator YP_071133.1 3099247 D 273123 CDS YP_071134.1 51596943 2956613 complement(3100626..3101156) 1 NC_006155.1 similar to Yersinia pestis YPO2759 smfA, mrpA; mannose-resistant/Proteus-like fimbrial protein (99.4% evalue=1.E-91); Salmonella typhimurium STM0195 stfA; fimbrial subunit (37.3% evalue=9.E-20); fimbrial protein 3101156 smfA 2956613 smfA Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_071134.1 3100626 R 273123 CDS YP_071135.1 51596944 2954360 3101944..3102639 1 NC_006155.1 similar to Yersinia pestis YPO2758 aspartate/glutamate racemase (99.5% evalue=1.E-127); Salmonella typhi STY3159 ygeA; conserved hypothetical protein (58.5% evalue=7.E-76); aspartate/glutamate racemase 3102639 2954360 YPTB2625 Yersinia pseudotuberculosis IP 32953 aspartate/glutamate racemase YP_071135.1 3101944 D 273123 CDS YP_071136.1 51596945 2955514 complement(3103047..3104270) 1 NC_006155.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 3104270 fabB 2955514 fabB Yersinia pseudotuberculosis IP 32953 3-oxoacyl-ACP synthase YP_071136.1 3103047 R 273123 CDS YP_071137.2 161760566 2954361 3104442..3106511 1 NC_006155.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3106511 mnmC 2954361 mnmC Yersinia pseudotuberculosis IP 32953 5-methylaminomethyl-2-thiouridine methyltransferase YP_071137.2 3104442 D 273123 CDS YP_071138.1 51596947 2954362 complement(3106813..3107091) 1 NC_006155.1 similar to Yersinia pestis YPO2755 conserved hypothetical protein (100% evalue=1.E-46); Salmonella typhimurium STM2380 yfcL; cytoplasmic protein (69.6% evalue=3.E-28); hypothetical protein 3107091 2954362 YPTB2628 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071138.1 3106813 R 273123 CDS YP_071139.1 51596948 2954363 complement(3107149..3107691) 1 NC_006155.1 similar to Yersinia pestis YPO2754 conserved hypothetical protein (98.8% evalue=1.E-107); Escherichia coli ECs3210 transporting ATPase (71.2% evalue=2.E-77); hypothetical protein 3107691 2954363 YPTB2629 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071139.1 3107149 R 273123 CDS YP_071140.1 51596949 2957016 complement(3107791..3108597) 1 NC_006155.1 similar to Yersinia pestis YPO2753 yfcA; membrane protein (100% evalue=1.E-148); Escherichia coli ECs3211 structural protein (72.1% evalue=1.E-107); hypothetical protein 3108597 yfcA 2957016 yfcA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071140.1 3107791 R 273123 CDS YP_071141.1 51596950 2956018 complement(3108601..3109389) 1 NC_006155.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 3109389 mepA 2956018 mepA Yersinia pseudotuberculosis IP 32953 penicillin-insensitive murein endopeptidase YP_071141.1 3108601 R 273123 CDS YP_071142.1 51596951 2955223 complement(3109434..3110519) 1 NC_006155.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3110519 aroC 2955223 aroC Yersinia pseudotuberculosis IP 32953 chorismate synthase YP_071142.1 3109434 R 273123 CDS YP_071143.1 51596952 2954364 complement(3110596..3111597) 1 NC_006155.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3111597 2954364 YPTB2633 Yersinia pseudotuberculosis IP 32953 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_071143.1 3110596 R 273123 CDS YP_071144.1 51596953 2954365 3111817..3112428 1 NC_006155.1 similar to Yersinia pestis YPO2749 conserved hypothetical protein (100% evalue=1.E-101); Escherichia coli Z3594 hypothetical protein (72.7% evalue=1.E-73); hypothetical protein 3112428 2954365 YPTB2634 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071144.1 3111817 D 273123 CDS YP_071145.1 51596954 2956608 complement(3112873..3113364) 1 NC_006155.1 similar to Yersinia pestis YPO2748 sixA; phosphohistidine phosphatase (100% evalue=4.E-90); Salmonella typhimurium STM2387 sixA; phosphohistidine phosphatase (66.4% evalue=3.E-54); phosphohistidine phosphatase 3113364 sixA 2956608 sixA Yersinia pseudotuberculosis IP 32953 phosphohistidine phosphatase YP_071145.1 3112873 R 273123 CDS YP_071146.1 51596955 2955529 complement(3113963..3116305) 1 NC_006155.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 3116305 fadJ 2955529 fadJ Yersinia pseudotuberculosis IP 32953 multifunctional fatty acid oxidation complex subunit alpha YP_071146.1 3113963 R 273123 CDS YP_071147.1 51596956 2954366 complement(3116305..3117615) 1 NC_006155.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 3117615 fadI 2954366 fadI Yersinia pseudotuberculosis IP 32953 3-ketoacyl-CoA thiolase YP_071147.1 3116305 R 273123 CDS YP_071148.1 51596957 2954367 complement(3117902..3118198) 1 NC_006155.1 similar to Yersinia pestis YPO2745 conserved hypothetical protein (100% evalue=6.E-52); Escherichia coli Z3606 hypothetical protein (63.8% evalue=1.E-29); hypothetical protein 3118198 2954367 YPTB2638 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071148.1 3117902 R 273123 CDS YP_071149.1 51596958 2955527 3118612..3119877 1 NC_006155.1 similar to Yersinia pestis YPO2744 fadL, ttr; long-chain fatty acid transport protein (99.7% evalue=0); Salmonella typhimurium STM2391 fadL; transport of long-chain fatty acids; sensitivity to phage T2 (64.4% evalue=1.E-168); long-chain fatty acid outer membrane transporter 3119877 fadL 2955527 fadL Yersinia pseudotuberculosis IP 32953 long-chain fatty acid outer membrane transporter YP_071149.1 3118612 D 273123 CDS YP_071150.1 51596959 2956891 complement(3119984..3120748) 1 NC_006155.1 similar to Yersinia pestis YPO2743.1 vcaJ; VacJ lipoprotein (100% evalue=1.E-147); Escherichia coli ECs3229 lipoprotein precursor (75% evalue=1.E-110); VacJ lipoprotein 3120748 vcaJ 2956891 vcaJ Yersinia pseudotuberculosis IP 32953 VacJ lipoprotein YP_071150.1 3119984 R 273123 CDS YP_071151.1 51596960 2954368 complement(3120784..3122010) 1 NC_006155.1 similar to Yersinia pestis YPO2743 cytochrome c-type biogenesis protein (99.7% evalue=0); Salmonella typhimurium STM3812 ccmH; heme lyase subunit, cytochrome c-type biogenesis (54.8% evalue=1.E-55); cytochrome c-type biogenesis protein 3122010 2954368 YPTB2641 Yersinia pseudotuberculosis IP 32953 cytochrome c-type biogenesis protein YP_071151.1 3120784 R 273123 CDS YP_071152.1 51596961 2955313 complement(3122010..3122522) 1 NC_006155.1 similar to Yersinia pestis YPO2741 ccmH; cytochrome c-type biogenesis protein (100% evalue=5.E-91); Escherichia coli Z3451 ccmH; cytochrome C-type biogenesis protein ccmH (60.3% evalue=4.E-40); cytochrome c-type biogenesis protein 3122522 ccmH 2955313 ccmH Yersinia pseudotuberculosis IP 32953 cytochrome c-type biogenesis protein YP_071152.1 3122010 R 273123 CDS YP_071153.1 51596962 2955312 complement(3122519..3123085) 1 NC_006155.1 similar to Yersinia pestis YPO2740 ccmG, dsbE; thiol:disulfide interchange protein DsbE (100% evalue=1.E-107); Escherichia coli b2195 dsbE, ccmG; thiol:disulfide interchange protein dsbE precursor (cytochrome C biogenesis protein ccmg) (73.2% evalue=2.E-76); thiol:disulfide interchange protein DsbE 3123085 ccmG 2955312 ccmG Yersinia pseudotuberculosis IP 32953 thiol:disulfide interchange protein DsbE YP_071153.1 3122519 R 273123 CDS YP_071154.1 51596963 2955311 complement(3123082..3125052) 1 NC_006155.1 similar to Yersinia pestis YPO2739 ccmF; cytochrome c-type biogenesis protein (99.8% evalue=0); Escherichia coli b2196 ccmF; cytochrome C-type biogenesis protein ccmF (70.9% evalue=0); cytochrome c-type biogenesis protein 3125052 ccmF 2955311 ccmF Yersinia pseudotuberculosis IP 32953 cytochrome c-type biogenesis protein YP_071154.1 3123082 R 273123 CDS YP_071155.1 51596964 2955310 complement(3125049..3125543) 1 NC_006155.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 3125543 ccmE 2955310 ccmE Yersinia pseudotuberculosis IP 32953 cytochrome c-type biogenesis protein CcmE YP_071155.1 3125049 R 273123 CDS YP_071156.1 51596965 2955309 complement(3125540..3125890) 1 NC_006155.1 similar to Yersinia pestis YPO2737 ccmD; heme exporter protein D (86.2% evalue=7.E-50); Escherichia coli b2198 ccmD; hemE exporter protein D (cytochrome C-type biogenesis protein ccmD) (50.7% evalue=1.E-15); heme exporter protein D 3125890 ccmD 2955309 ccmD Yersinia pseudotuberculosis IP 32953 heme exporter protein D YP_071156.1 3125540 R 273123 CDS YP_071157.1 51596966 2955308 complement(3125887..3126624) 1 NC_006155.1 similar to Yersinia pestis YPO2736 ccmC; heme exporter protein C (99.5% evalue=1.E-145); Escherichia coli b2199 ccmC; hemE exporter protein C (cytochrome C-type biogenesis protein ccmC) (76.2% evalue=1.E-112); heme ABC transporter permease CcmC 3126624 ccmC 2955308 ccmC Yersinia pseudotuberculosis IP 32953 heme ABC transporter permease CcmC YP_071157.1 3125887 R 273123 CDS YP_071158.1 51596967 2955307 complement(3126687..3127346) 1 NC_006155.1 similar to Yersinia pestis YPO2735 ccmB; heme exporter protein B (100% evalue=1.E-116); Escherichia coli b2200 ccmB; hemE exporter protein B (cytochrome C-type biogenesis protein ccmB) (77.1% evalue=7.E-91); heme ABC transporter permease subunit CcmB 3127346 ccmB 2955307 ccmB Yersinia pseudotuberculosis IP 32953 heme ABC transporter permease subunit CcmB YP_071158.1 3126687 R 273123 CDS YP_071159.1 51596968 2955306 complement(3127316..3127972) 1 NC_006155.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 3127972 ccmA 2955306 ccmA Yersinia pseudotuberculosis IP 32953 cytochrome c biogenesis protein CcmA YP_071159.1 3127316 R 273123 CDS YP_071160.1 51596969 2954369 complement(3128417..3128884) 1 NC_006155.1 similar to Yersinia pestis YPO2733 exported protein (98.7% evalue=2.E-84); hypothetical protein 3128884 2954369 YPTB2650 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071160.1 3128417 R 273123 CDS YP_071161.1 51596970 2955936 3129501..3130043 1 NC_006155.1 similar to Yersinia pestis YPO2732 lemA; exported protein (100% evalue=3.E-97); Agrobacterium tumefaciens AGR_C_1138 lemA; lemA protein (49.4% evalue=2.E-43); hypothetical protein 3130043 lemA 2955936 lemA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071161.1 3129501 D 273123 CDS YP_071162.1 51596971 2954370 3129988..3132087 1 NC_006155.1 similar to Yersinia pestis YPO2731 membrane protein (99.7% evalue=0); Escherichia coli b1268 yciQ; hypothetical 71.3 kD protein in trpL-btuR intergenic region (ORF2/3) (27.8% evalue=5.E-59); hypothetical protein 3132087 2954370 YPTB2652 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071162.1 3129988 D 273123 CDS YP_071163.1 51596972 2954371 3132463..3132804 1 NC_006155.1 similar to Yersinia pestis YPO2730 conserved hypothetical protein (99.1% evalue=2.E-62); Salmonella typhi STY4488 phnA; conserved hypothetical protein (72% evalue=3.E-43); hypothetical protein 3132804 2954371 YPTB2653 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071163.1 3132463 D 273123 CDS YP_071164.1 51596973 2954372 complement(3132879..3133244) 1 NC_006155.1 similar to Yersinia pestis YPO2729 membrane protein (100% evalue=2.E-60); hypothetical protein 3133244 2954372 YPTB2654 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071164.1 3132879 R 273123 CDS YP_071165.1 51596974 2954373 complement(3133251..3133730) 1 NC_006155.1 similar to Yersinia pestis YPO2728 conserved hypothetical protein (100% evalue=2.E-88); Salmonella typhi STY0290 conserved hypothetical protein (38.7% evalue=6.E-21); hypothetical protein 3133730 2954373 YPTB2655 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071165.1 3133251 R 273123 CDS YP_071166.1 51596975 2954374 complement(3133795..3134601) 1 NC_006155.1 similar to Yersinia pestis YPO2727 conserved hypothetical protein (98.8% evalue=1.E-154); Pseudomonas aeruginosa PA0086 hypothetical protein (37.7% evalue=1.E-39); hypothetical protein 3134601 2954374 YPTB2656 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071166.1 3133795 R 273123 CDS YP_071167.1 51596976 2954375 complement(3134621..3135469) 1 NC_006155.1 similar to Yersinia pestis YPO2726 hypothetical protein (100% evalue=1.E-164); hypothetical protein 3135469 2954375 YPTB2657 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071167.1 3134621 R 273123 CDS YP_071168.1 51596977 2954376 complement(3135469..3135729) 1 NC_006155.1 similar to Salmonella typhi STY0321 Rhs-family protein (39.7% evalue=2.E-07); Ralstonia solanacearum RS01806 probable transmembrane protein (47.2% evalue=6.E-09); hypothetical protein 3135729 2954376 YPTB2658 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071168.1 3135469 R 273123 CDS YP_071169.1 51596978 2954377 complement(3135809..3138721) 1 NC_006155.1 similar to Yersinia pestis YPO2725 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY0319 Rhs-family protein (41.3% evalue=1.E-137); hypothetical protein 3138721 2954377 YPTB2659 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071169.1 3135809 R 273123 CDS YP_071170.1 51596979 2954378 complement(3139015..3142842) 1 NC_006155.1 similar to Yersinia pestis YPO2724 membrane protein (99.4% evalue=0); Salmonella typhimurium STM0285 inner membrane protein (32% evalue=0); hypothetical protein 3142842 2954378 YPTB2660 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071170.1 3139015 R 273123 CDS YP_071171.1 51596980 2954379 complement(3142851..3144227) 1 NC_006155.1 similar to Yersinia pestis YPO2723 OmpA family protein (100% evalue=1.E-144); Salmonella typhimurium STM0282 outer membrane protein, OmpA family (41.1% evalue=2.E-83); OmpA/MotB family protein 3144227 2954379 YPTB2661 Yersinia pseudotuberculosis IP 32953 OmpA/MotB family protein YP_071171.1 3142851 R 273123 CDS YP_071172.1 51596981 2954380 complement(3144224..3145573) 1 NC_006155.1 similar to Yersinia pestis YPO2934 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0281 cytoplasmic protein (51.6% evalue=1.E-132); hypothetical protein 3145573 2954380 YPTB2662 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071172.1 3144224 R 273123 CDS YP_071173.1 51596982 2954381 complement(3145577..3146137) 1 NC_006155.1 similar to Yersinia pestis YPO2935 exported protein (100% evalue=1.E-101); Pseudomonas aeruginosa PA0080 hypothetical protein (33.3% evalue=2.E-15); hypothetical protein 3146137 2954381 YPTB2663 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071173.1 3145577 R 273123 CDS YP_071174.1 51596983 2954382 complement(3146390..3146959) 1 NC_006155.1 similar to Yersinia pestis YPO2937 conserved hypothetical protein (100% evalue=2.E-90); Salmonella typhimurium STM0279 cytoplasmic protein (56.3% evalue=1.E-47); hypothetical protein 3146959 2954382 YPTB2664 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071174.1 3146390 R 273123 CDS YP_071175.1 51596984 2954383 complement(3147208..3148710) 1 NC_006155.1 similar to Yersinia pestis YPO2938 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM0274 cytoplasmic protein (78.8% evalue=0); hypothetical protein 3148710 2954383 YPTB2665 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071175.1 3147208 R 273123 CDS YP_071176.1 51596985 2954384 complement(3148734..3149258) 1 NC_006155.1 similar to Yersinia pestis YPO2939 conserved hypothetical protein (100% evalue=9.E-92); Salmonella typhimurium STM0273 cytoplasmic protein (77.1% evalue=1.E-68); hypothetical protein 3149258 2954384 YPTB2666 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071176.1 3148734 R 273123 CDS YP_071177.1 51596986 2954385 complement(3149364..3149972) 1 NC_006155.1 similar to Yersinia pestis YPO2945 frimbrial protein (37.1% evalue=3.E-13); fimbrial protein 3149972 2954385 YPTB2667 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_071177.1 3149364 R 273123 CDS YP_071178.1 51596987 2954386 complement(3149957..3152668) 1 NC_006155.1 similar to Xylella fastidiosa XF0081 outer membrane usher protein precursor (33.8% evalue=1.E-137); Pseudomonas aeruginosa PA4084 probable fimbrial biogenesis usher protein (35.2% evalue=1.E-131); outer membrane fimbrial usher porin 3152668 2954386 YPTB2668 Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_071178.1 3149957 R 273123 CDS YP_071179.1 51596988 2954387 complement(3152757..3153518) 1 NC_006155.1 similar to Yersinia pestis YPO2944 pili chaperone protein (100% evalue=1.E-140); Escherichia coli Z0151 ecpD; fimbrial chaperone protein (44.4% evalue=1.E-51); pili chaperone protein 3153518 2954387 YPTB2669 Yersinia pseudotuberculosis IP 32953 pili chaperone protein YP_071179.1 3152757 R 273123 CDS YP_071180.1 51596989 2954388 complement(3153675..3154220) 1 NC_006155.1 similar to Yersinia pestis YPO2945 frimbrial protein (98.8% evalue=2.E-96); Xylella fastidiosa XF0083 fimbrial subunit precursor (36.1% evalue=2.E-16); frimbrial protein 3154220 2954388 YPTB2670 Yersinia pseudotuberculosis IP 32953 frimbrial protein YP_071180.1 3153675 R 273123 CDS YP_071181.1 51596990 2955338 complement(3154431..3157088) 1 NC_006155.1 similar to Yersinia pestis YPO2946 clpB5; Clp ATPase (99.2% evalue=0); Salmonella typhimurium STM0272 ATPase with chaperone activity; Homolog of Yersinia clpB (60.1% evalue=0); Clp ATPase 3157088 clpB5 2955338 clpB5 Yersinia pseudotuberculosis IP 32953 Clp ATPase YP_071181.1 3154431 R 273123 CDS YP_071182.1 51596991 2954389 3157872..3159752 1 NC_006155.1 similar to Yersinia pestis YPO2947 conserved hypothetical protein (99.8% evalue=0); Salmonella typhimurium STM0268 cytoplasmic protein (55.4% evalue=0); hypothetical protein 3159752 2954389 YPTB2672 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071182.1 3157872 D 273123 CDS YP_071183.1 51596992 2954390 3159752..3160777 1 NC_006155.1 similar to Yersinia pestis YPO2948 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0267 cytoplasmic protein (45.4% evalue=2.E-78); hypothetical protein 3160777 2954390 YPTB2673 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071183.1 3159752 D 273123 CDS YP_071184.1 51596993 2954391 3160876..3162069 1 NC_006155.1 similar to Yersinia pestis YPO2949 hypothetical protein (97.9% evalue=0); Salmonella typhimurium STM0266 cytoplasmic protein (32.2% evalue=3.E-45); hypothetical protein 3162069 2954391 YPTB2674 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071184.1 3160876 D 273123 CDS YP_071185.1 51596994 2954392 3162076..3163107 1 NC_006155.1 similar to Yersinia pestis YPO2950 fimbrial protein (96.2% evalue=0); fimbrial protein 3163107 2954392 YPTB2675 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_071185.1 3162076 D 273123 CDS YP_071186.1 51596995 2954393 3163147..3164484 1 NC_006155.1 similar to Yersinia pestis YPO2951 hypothetical protein (98.4% evalue=0); hypothetical protein 3164484 2954393 YPTB2676 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071186.1 3163147 D 273123 CDS YP_071187.1 51596996 2954394 3164481..3165182 1 NC_006155.1 similar to Yersinia pestis YPO2952 membrane protein (95.2% evalue=1.E-122); hypothetical protein 3165182 2954394 YPTB2677 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071187.1 3164481 D 273123 CDS YP_071188.1 51596997 2954395 3165183..3166865 1 NC_006155.1 similar to Yersinia pestis YPO2953 membrane protein (97.1% evalue=0); OMPA family outer membrane porin 3166865 2954395 YPTB2678 Yersinia pseudotuberculosis IP 32953 OMPA family outer membrane porin YP_071188.1 3165183 D 273123 CDS YP_071189.1 51596998 2954396 3166862..3167344 1 NC_006155.1 similar to Yersinia pestis YPO2954 hypothetical protein (100% evalue=2.E-89); hypothetical protein 3167344 2954396 YPTB2679 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071189.1 3166862 D 273123 CDS YP_071190.1 51596999 2954397 complement(3167717..3168319) 1 NC_006155.1 similar to Yersinia pestis YPO2955 luxR-family regulatory protein (99% evalue=1.E-107); LuxR family transcriptional regulator 3168319 2954397 YPTB2680 Yersinia pseudotuberculosis IP 32953 LuxR family transcriptional regulator YP_071190.1 3167717 R 273123 CDS YP_071191.1 51597000 2956050 complement(3169588..3170682) 1 NC_006155.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 3170682 mltB 2956050 mltB Yersinia pseudotuberculosis IP 32953 murein hydrolase B YP_071191.1 3169588 R 273123 CDS YP_071192.1 51597001 2956603 3171011..3172030 1 NC_006155.1 similar to Yersinia pestis YPO2958 sfuA, yfuA; iron(III)-binding periplasmic protein (99.7% evalue=0); Mesorhizobium loti mlr3495 iron-binding periplasmic protein; sfuA protein precursor (72.2% evalue=1.E-130); iron(III)-ABC transporter substrate-binding protein 3172030 sfuA 2956603 sfuA Yersinia pseudotuberculosis IP 32953 iron(III)-ABC transporter substrate-binding protein YP_071192.1 3171011 D 273123 CDS YP_071193.1 51597002 2956604 3172085..3173671 1 NC_006155.1 similar to Yersinia pestis YPO2959 sfuB, yfuB; iron(III)-transport system permease (99.2% evalue=0); Mesorhizobium loti mlr3497 IRON(III)-TRANSPORT SYSTEM PERMEase SFUB (63.4% evalue=0); iron ABC transporter permease 3173671 sfuB 2956604 sfuB Yersinia pseudotuberculosis IP 32953 iron ABC transporter permease YP_071193.1 3172085 D 273123 CDS YP_071194.1 51597003 2956605 3173668..3174717 1 NC_006155.1 similar to Yersinia pestis YPO2960 sfuC, yfuC; iron(III)-transport ATP-binding protein (99.7% evalue=0); Mesorhizobium loti mlr3498 IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC (50.6% evalue=6.E-89); iron(III) ABC transporter ATP-binding protein 3174717 sfuC 2956605 sfuC Yersinia pseudotuberculosis IP 32953 iron(III) ABC transporter ATP-binding protein YP_071194.1 3173668 D 273123 CDS YP_071195.1 51597004 2954398 complement(3174790..3175314) 1 NC_006155.1 similar to Yersinia pestis YPO2961 membrane protein (100% evalue=1.E-93); Mesorhizobium loti mll8055 hypothetical protein (38.6% evalue=5.E-28); hypothetical protein 3175314 2954398 YPTB2685 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071195.1 3174790 R 273123 CDS YP_071196.1 51597005 2954399 3175775..3176260 1 NC_006155.1 similar to Yersinia pestis YPO2962 conserved hypothetical protein (100% evalue=1.E-88); hypothetical protein 3176260 2954399 YPTB2686 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071196.1 3175775 D 273123 CDS YP_071197.1 51597006 2954400 complement(3176490..3177338) 1 NC_006155.1 similar to Yersinia pestis YPO4049 membrane protein (30.3% evalue=5.E-15); hypothetical protein 3177338 2954400 YPTB2687 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071197.1 3176490 R 273123 CDS YP_071198.1 51597007 2955464 3178169..3180595 1 NC_006155.1 similar to Yersinia pestis YPO2965 dmsA; dimethyl sulfoxide reductase chain A protein (99.2% evalue=0); Salmonella typhimurium STM4305 anaerobic dimethyl sulfoxide reductase, subunit A (56.2% evalue=0); dimethyl sulfoxide reductase subunit A 3180595 dmsA 2955464 dmsA Yersinia pseudotuberculosis IP 32953 dimethyl sulfoxide reductase subunit A YP_071198.1 3178169 D 273123 CDS YP_071199.1 51597008 2955467 3180607..3181224 1 NC_006155.1 similar to Yersinia pestis YPO2966 dmsB; dimethyl sulfoxide reductase chain B protein (100% evalue=1.E-125); Salmonella typhimurium STM4306 anaerobic dimethyl sulfoxide reductase, subunit B (67.8% evalue=2.E-87); dimethyl sulfoxide reductase subunit B 3181224 dmsB 2955467 dmsB Yersinia pseudotuberculosis IP 32953 dimethyl sulfoxide reductase subunit B YP_071199.1 3180607 D 273123 CDS YP_071200.1 51597009 2955469 3181226..3182002 1 NC_006155.1 similar to Yersinia pestis YPO2967 dmsC; dimethyl sulfoxide reductase chain C protein (99.6% evalue=1.E-141); Salmonella typhimurium STM4307 anaerobic dimethyl sulfoxide reductase, subunit C (43% evalue=3.E-50); dimethyl sulfoxide reductase subunit C 3182002 dmsC 2955469 dmsC Yersinia pseudotuberculosis IP 32953 dimethyl sulfoxide reductase subunit C YP_071200.1 3181226 D 273123 CDS YP_071201.1 51597010 2954401 3182484..3183080 1 NC_006155.1 similar to Yersinia pestis YPO2968 conserved hypothetical protein (98.9% evalue=1.E-113); Salmonella typhimurium STM4308 component of anaerobic dehydrogenases (48.7% evalue=1.E-46); hypothetical protein 3183080 2954401 YPTB2691 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071201.1 3182484 D 273123 CDS YP_071202.1 51597011 2954402 3183077..3183646 1 NC_006155.1 similar to Yersinia pestis YPO2969 iron-sulphur protein (99.4% evalue=1.E-111); Pasteurella multocida PM1758 hypothetical HI1043 (37.9% evalue=6.E-21); (Fe-S)-binding protein 3183646 2954402 YPTB2692 Yersinia pseudotuberculosis IP 32953 (Fe-S)-binding protein YP_071202.1 3183077 D 273123 CDS YP_071203.1 51597012 2954403 complement(3183892..3184548) 1 NC_006155.1 similar to Yersinia pestis YPO2970 lipoprotein (100% evalue=1.E-119); Ralstonia solanacearum RS01774 probable lipoprotein (62.4% evalue=6.E-68); lipoprotein 3184548 2954403 YPTB2693 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071203.1 3183892 R 273123 CDS YP_071204.1 51597013 2954404 complement(3184545..3184946) 1 NC_006155.1 similar to Yersinia pestis YPO2971 lipoprotein (100% evalue=2.E-64); Ralstonia solanacearum RS01775 probable lipoprotein (45.2% evalue=5.E-24); lipoprotein 3184946 2954404 YPTB2694 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071204.1 3184545 R 273123 CDS YP_071205.1 51597014 2954405 complement(3184928..3185599) 1 NC_006155.1 similar to Yersinia pestis YPO2972 lipoprotein (97.7% evalue=1.E-119); Neisseria meningitidis NMB1164 hypothetical protein (76.4% evalue=9.E-89); lipoprotein 3185599 2954405 YPTB2695 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071205.1 3184928 R 273123 CDS YP_071206.1 51597015 2954406 3186285..3186716 1 NC_006155.1 similar to Yersinia pestis YPO2973 hypothetical protein (97.2% evalue=8.E-74); Escherichia coli ECs2042 hypothetical protein (27.6% evalue=3.E-10); hypothetical protein 3186716 2954406 YPTB2696 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071206.1 3186285 D 273123 CDS YP_071207.1 51597016 2954407 complement(3186811..3187335) 1 NC_006155.1 similar to Yersinia pestis YPO2974 B-type cytochrome (100% evalue=1.E-102); Salmonella typhi STY1868 cytochrome (44.7% evalue=1.E-43); B-type cytochrome 3187335 2954407 YPTB2697 Yersinia pseudotuberculosis IP 32953 B-type cytochrome YP_071207.1 3186811 R 273123 CDS YP_071208.1 51597017 2954408 complement(3187580..3188815) 1 NC_006155.1 similar to Yersinia pestis YPO2975 aminotransferase (99.7% evalue=0); Pseudomonas aeruginosa PA4715 N-succinyldiaminopimelate aminotransferase (90.7% evalue=0); aminotransferase 3188815 2954408 YPTB2698 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_071208.1 3187580 R 273123 CDS YP_071209.1 51597018 2954409 3189081..3190328 1 NC_006155.1 similar to Yersinia pestis YPO2976 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0898 hypothetical protein (51.2% evalue=1.E-112); hypothetical protein 3190328 2954409 YPTB2699 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071209.1 3189081 D 273123 CDS YP_071210.1 51597019 2955692 complement(3190406..3191377) 1 NC_006155.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 3191377 glk 2955692 glk Yersinia pseudotuberculosis IP 32953 glucokinase YP_071210.1 3190406 R 273123 CDS YP_071211.1 51597020 2954410 complement(3191558..3192034) 1 NC_006155.1 similar to Yersinia pestis YPO2978 membrane protein (98.7% evalue=1.E-85); Salmonella typhimurium STM3021 inner membrane protein (58.1% evalue=2.E-45); hypothetical protein 3192034 2954410 YPTB2701 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071211.1 3191558 R 273123 CDS YP_071212.1 51597021 2954411 3192137..3193015 1 NC_006155.1 similar to Yersinia pestis YPO2979 lysR-family transcriptional regulatory protein (100% evalue=1.E-167); Salmonella typhi STY3165 possible regulatory protein (59.7% evalue=9.E-90); LysR family transcriptional regulator 3193015 2954411 YPTB2702 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071212.1 3192137 D 273123 CDS YP_071213.1 51597022 2954412 3193151..3194140 1 NC_006155.1 similar to Yersinia pestis YPO2980 ion channel protein (99.6% evalue=0); Salmonella typhi STY2647 ion-channel protein (74.6% evalue=1.E-142); ion channel protein 3194140 2954412 YPTB2703 Yersinia pseudotuberculosis IP 32953 ion channel protein YP_071213.1 3193151 D 273123 CDS YP_071214.1 51597023 2954413 3194311..3194724 1 NC_006155.1 similar to Yersinia pestis YPO2981 exported protein (100% evalue=4.E-86); hypothetical protein 3194724 2954413 YPTB2704 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071214.1 3194311 D 273123 CDS YP_071215.1 51597024 2956053 complement(3194817..3196046) 1 NC_006155.1 similar to Yersinia pestis YPO2982 mntH; manganese transport protein MntH (100% evalue=0); Escherichia coli Z3658 transport system permease (77.5% evalue=1.E-176); manganese transport protein MntH 3196046 mntH 2956053 mntH Yersinia pseudotuberculosis IP 32953 manganese transport protein MntH YP_071215.1 3194817 R 273123 CDS YP_071216.1 51597025 2956180 3196497..3197681 1 NC_006155.1 similar to Yersinia pestis YPO2983 nupC, cru; nucleoside permease (100% evalue=0); Salmonella typhimurium STM2409 nupC; NUP family, nucleoside transport (81.7% evalue=1.E-176); CNT family H+/nucleoside symporter 3197681 nupC 2956180 nupC Yersinia pseudotuberculosis IP 32953 CNT family H+/nucleoside symporter YP_071216.1 3196497 D 273123 CDS YP_071217.1 51597026 2955725 3199412..3200827 1 NC_006155.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3200827 gltX 2955725 gltX Yersinia pseudotuberculosis IP 32953 glutamyl-tRNA synthetase YP_071217.1 3199412 D 273123 CDS YP_071218.1 51597027 2954414 3201477..3202085 1 NC_006155.1 similar to Yersinia pestis YPO2986 conserved hypothetical protein (100% evalue=1.E-117); Vibrio cholerae VCA0380 hypothetical protein (41.9% evalue=2.E-35); hypothetical protein 3202085 2954414 YPTB2708 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071218.1 3201477 D 273123 CDS YP_071219.1 51597028 2954415 3202234..3202581 1 NC_006155.1 similar to Yersinia pestis YPO2987 exported protein (98.2% evalue=3.E-55); Escherichia coli Z3672 hypothetical protein (37.7% evalue=1.E-11); hypothetical protein 3202581 2954415 YPTB2709 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071219.1 3202234 D 273123 CDS YP_071220.1 51597029 2954416 complement(3202698..3202913) 1 NC_006155.1 similar to Yersinia pestis YPO2988 conserved hypothetical protein (100% evalue=2.E-35); Salmonella typhimurium STM2426 cytoplasmic protein (78.2% evalue=1.E-24); hypothetical protein 3202913 2954416 YPTB2710 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071220.1 3202698 R 273123 CDS YP_071221.1 51597030 2955947 complement(3202933..3204945) 1 NC_006155.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 3204945 ligA 2955947 ligA Yersinia pseudotuberculosis IP 32953 NAD-dependent DNA ligase LigA YP_071221.1 3202933 R 273123 CDS YP_071222.1 51597031 2957124 complement(3205036..3206022) 1 NC_006155.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 3206022 zipA 2957124 zipA Yersinia pseudotuberculosis IP 32953 cell division protein ZipA YP_071222.1 3205036 R 273123 CDS YP_071223.1 51597032 2955417 3206271..3207005 1 NC_006155.1 role in sulfur assimilation; sulfate transport protein CysZ 3207005 cysZ 2955417 cysZ Yersinia pseudotuberculosis IP 32953 sulfate transport protein CysZ YP_071223.1 3206271 D 273123 CDS YP_071224.1 51597033 2955408 3207162..3208130 1 NC_006155.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3208130 cysK 2955408 cysK Yersinia pseudotuberculosis IP 32953 cysteine synthase A YP_071224.1 3207162 D 273123 CDS YP_071225.1 51597034 2956361 3208629..3208886 1 NC_006155.1 similar to Yersinia pestis YPO2993 ptsH, hpr; PTS system, phosphocarrier protein (100% evalue=8.E-41); Escherichia coli JW2408 ptsH; Phosphocarrier protein Hpr (histidine-containing protein) (97.6% evalue=5.E-40); PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 3208886 ptsH 2956361 ptsH Yersinia pseudotuberculosis IP 32953 PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr YP_071225.1 3208629 D 273123 CDS YP_071226.1 51597035 2956362 3208935..3210662 1 NC_006155.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 3210662 ptsI 2956362 ptsI Yersinia pseudotuberculosis IP 32953 phosphoenolpyruvate-protein phosphotransferase YP_071226.1 3208935 D 273123 CDS YP_071227.1 51597036 2955363 3210711..3211220 1 NC_006155.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 3211220 crr 2955363 crr Yersinia pseudotuberculosis IP 32953 PTS system glucose-specific transporter YP_071227.1 3210711 D 273123 CDS YP_071228.1 51597037 2954417 complement(3211421..3212770) 1 NC_006155.1 similar to Yersinia pestis YPO2997 two-component system sensor kinase (99.5% evalue=0); Ralstonia solanacearum RS03089 probable two-component transmembrane sensor kinase transcription regulator protein (37.9% evalue=2.E-49); two-component system sensor kinase 3212770 2954417 YPTB2718 Yersinia pseudotuberculosis IP 32953 two-component system sensor kinase YP_071228.1 3211421 R 273123 CDS YP_071229.1 51597038 2954418 complement(3212796..3213479) 1 NC_006155.1 similar to Yersinia pestis YPO2998 two-component system response regulator (100% evalue=1.E-125); Ralstonia solanacearum RS03088 probable two-component response regulator transcription regulator protein (49.7% evalue=1.E-57); two-component system response regulator 3213479 2954418 YPTB2719 Yersinia pseudotuberculosis IP 32953 two-component system response regulator YP_071229.1 3212796 R 273123 CDS YP_071230.1 51597039 2954419 3213667..3214872 1 NC_006155.1 similar to Yersinia pestis YPO2999 HlyD family secretion protein (100% evalue=0); Agrobacterium tumefaciens Atu5177 efflux protein (45.9% evalue=6.E-89); HlyD family secretion protein 3214872 2954419 YPTB2720 Yersinia pseudotuberculosis IP 32953 HlyD family secretion protein YP_071230.1 3213667 D 273123 CDS YP_071231.1 51597040 2954420 3214876..3216912 1 NC_006155.1 similar to Yersinia pestis YPO3000 ABC transporter, ATP-binding protein (99.8% evalue=0); Agrobacterium tumefaciens Atu5178 ABC transporter, nucleotide binding/ATPase (54.7% evalue=0); ABC transporter permease/ATP-binding protein 3216912 2954420 YPTB2721 Yersinia pseudotuberculosis IP 32953 ABC transporter permease/ATP-binding protein YP_071231.1 3214876 D 273123 CDS YP_071232.1 51597041 2954421 complement(3217167..3218813) 1 NC_006155.1 similar to Yersinia pestis YPO3001 pyridine nucleotide-disulphide oxidoreductase (99% evalue=0); Lactococcus lactis L194050 noxC; NADH oxidase (51.6% evalue=1.E-154); pyridine nucleotide-disulfide oxidoreductase 3218813 2954421 YPTB2722 Yersinia pseudotuberculosis IP 32953 pyridine nucleotide-disulfide oxidoreductase YP_071232.1 3217167 R 273123 CDS YP_071233.1 51597042 2954422 complement(3218873..3220333) 1 NC_006155.1 similar to Yersinia pestis YPO3002 permease (99.7% evalue=0); Bacillus subtilis BG13069 yhjB; sodium:solute symporter (49.5% evalue=1.E-141); sodium:solute symporter (SSS) family protein 3220333 2954422 YPTB2723 Yersinia pseudotuberculosis IP 32953 sodium:solute symporter (SSS) family protein YP_071233.1 3218873 R 273123 CDS YP_071234.1 51597043 2954423 complement(3220330..3220527) 1 NC_006155.1 similar to Yersinia pestis YPO3033 hypothetical protein; hypothetical protein 3220527 2954423 YPTB2724 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071234.1 3220330 R 273123 CDS YP_071235.1 51597044 2954424 complement(3220670..3221890) 1 NC_006155.1 similar to Yersinia pestis YPO1950 peptidase (70.3% evalue=1.E-162); Agrobacterium tumefaciens AGR_L_3328 hypothetical protein (30.6% evalue=2.E-43); peptidase 3221890 2954424 YPTB2725 Yersinia pseudotuberculosis IP 32953 peptidase YP_071235.1 3220670 R 273123 CDS YP_071236.1 51597045 2954425 complement(3221924..3223105) 1 NC_006155.1 similar to Yersinia pestis YPO3006 aminotransferase (99.4% evalue=0); Clostridium acetobutylicum CAC2970 PatB; PLP-dependent aminotransferase, (45.1% evalue=1.E-100); aminotransferase 3223105 2954425 YPTB2726 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_071236.1 3221924 R 273123 CDS YP_071237.1 51597046 2954426 3223806..3225224 1 NC_006155.1 similar to Yersinia pestis YPO3007 membrane protein (99.7% evalue=0); Anabaena all1782 hypothetical protein (27.5% evalue=3.E-34); hypothetical protein 3225224 2954426 YPTB2727 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071237.1 3223806 D 273123 CDS YP_071238.1 51597047 2954427 3225469..3227013 1 NC_006155.1 similar to Yersinia pestis YPO3008 two-component sensor histidine kinase (100% evalue=0); S. pneumoniae_R6spr1894 phoR pnpS; histidine kinase (33.9% evalue=1.E-31); two-component sensor histidine kinase 3227013 2954427 YPTB2728 Yersinia pseudotuberculosis IP 32953 two-component sensor histidine kinase YP_071238.1 3225469 D 273123 CDS YP_071239.1 51597048 2954428 3227010..3227717 1 NC_006155.1 similar to Yersinia pestis YPO3009 two-component response regulator (99.5% evalue=1.E-133); C. perfringens CPE0642 two-component response regulator (42.7% evalue=1.E-49); two-component response regulator 3227717 2954428 YPTB2729 Yersinia pseudotuberculosis IP 32953 two-component response regulator YP_071239.1 3227010 D 273123 CDS YP_071240.1 51597049 2955409 complement(3229562..3230455) 1 NC_006155.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 3230455 cysM 2955409 cysM Yersinia pseudotuberculosis IP 32953 cysteine synthase B YP_071240.1 3229562 R 273123 CDS YP_071241.1 51597050 2955398 complement(3230626..3231717) 1 NC_006155.1 similar to Yersinia pestis YPO3012 cysA; sulfate transport ATP-binding protein (99.7% evalue=0); Escherichia coli ECs3293 ATP-binding component of sulfate permease A protein; chromate resistance (77.9% evalue=1.E-161); sulfate/thiosulfate transporter subunit 3231717 cysA 2955398 cysA Yersinia pseudotuberculosis IP 32953 sulfate/thiosulfate transporter subunit YP_071241.1 3230626 R 273123 CDS YP_071242.1 51597051 2955416 complement(3231707..3232582) 1 NC_006155.1 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit 3232582 cysW 2955416 cysW Yersinia pseudotuberculosis IP 32953 sulfate/thiosulfate transporter permease subunit YP_071242.1 3231707 R 273123 CDS YP_071243.1 51597052 2955415 complement(3232582..3233415) 1 NC_006155.1 similar to Yersinia pestis YPO3014 cysT; sulfate transport system permease CysT (100% evalue=1.E-153); Escherichia coli b2424 cysU, cysT; sulfate transport system permease (85.9% evalue=1.E-133); sulfate/thiosulfate transporter subunit 3233415 cysT 2955415 cysT Yersinia pseudotuberculosis IP 32953 sulfate/thiosulfate transporter subunit YP_071243.1 3232582 R 273123 CDS YP_071244.1 51597053 2955412 complement(3233415..3234452) 1 NC_006155.1 similar to Yersinia pestis YPO3015 cysP; thiosulfate-binding protein (100% evalue=0); Escherichia coli Z3690 cysP; thiosulfate binding protein (74.3% evalue=1.E-146); thiosulfate transporter subunit 3234452 cysP 2955412 cysP Yersinia pseudotuberculosis IP 32953 thiosulfate transporter subunit YP_071244.1 3233415 R 273123 CDS YP_071245.1 51597054 2956125 complement(3234785..3236317) 1 NC_006155.1 similar to Yersinia pestis YPO3016 nanT; sugar transporter (99.8% evalue=0); Escherichia coli b3224 nanT; sialic acid transporter (76.1% evalue=0); sialic acid transporter 3236317 nanT 2956125 nanT Yersinia pseudotuberculosis IP 32953 sialic acid transporter YP_071245.1 3234785 R 273123 CDS YP_071246.1 51597055 2954430 complement(3236922..3237800) 1 NC_006155.1 similar to Yersinia pestis YPO3017 rpiR-family transcriptional regulatory protein (99.3% evalue=1.E-157); Salmonella typhimurium STM1127 transcriptional regulator (69.7% evalue=1.E-103); rpiR family transcriptional regulatory protein 3237800 2954430 YPTB2737 Yersinia pseudotuberculosis IP 32953 rpiR family transcriptional regulatory protein YP_071246.1 3236922 R 273123 CDS YP_071247.1 51597056 2954431 complement(3237990..3238460) 1 NC_006155.1 similar to Yersinia pestis YPO3019 conserved hypothetical protein (98.6% evalue=9.E-84); Pasteurella multocida PM1713 hypothetical HI0227 (52.5% evalue=9.E-33); hypothetical protein 3238460 2954431 YPTB2738 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071247.1 3237990 R 273123 CDS YP_071248.1 51597057 2954432 complement(3238542..3239414) 1 NC_006155.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase 3239414 2954432 YPTB2739 Yersinia pseudotuberculosis IP 32953 N-acetylmannosamine kinase YP_071248.1 3238542 R 273123 CDS YP_071249.1 51597058 2954433 3239683..3240822 1 NC_006155.1 similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (36.2% evalue=3.E-47); hypothetical protein 3240822 2954433 YPTB2740 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071249.1 3239683 D 273123 CDS YP_071250.1 51597059 2954434 3241090..3241791 1 NC_006155.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 3241791 2954434 YPTB2741 Yersinia pseudotuberculosis IP 32953 N-acetylmannosamine-6-phosphate 2-epimerase YP_071250.1 3241090 D 273123 CDS YP_071251.1 51597060 2956124 3241854..3242747 1 NC_006155.1 similar to Yersinia pestis YPO3024 nanA, npl; probable N-acetylneuraminate lyase (100% evalue=1.E-170); Vibrio cholerae VC1776 N-acetylneuraminate lyase, (75% evalue=1.E-126); N-acetylneuraminate lyase 3242747 nanA 2956124 nanA Yersinia pseudotuberculosis IP 32953 N-acetylneuraminate lyase YP_071251.1 3241854 D 273123 CDS YP_071252.1 51597061 2954435 complement(3242845..3243744) 1 NC_006155.1 similar to Yersinia pestis YPO3025 conserved hypothetical protein (99.6% evalue=1.E-172); Salmonella typhi STY2683 conserved hypothetical protein (67.6% evalue=1.E-113); hypothetical protein 3243744 2954435 YPTB2743 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071252.1 3242845 R 273123 CDS YP_071253.1 51597062 2957024 complement(3243922..3244533) 1 NC_006155.1 similar to Yersinia pestis YPO3026 yfeY; lipoprotein (100% evalue=1.E-115); Escherichia coli JW2425 hypothetical protein (55.4% evalue=4.E-57); hypothetical protein 3244533 yfeY 2957024 yfeY Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071253.1 3243922 R 273123 CDS YP_071254.1 51597063 2957053 3244896..3245309 1 NC_006155.1 similar to Yersinia pestis YPO3027 ygiW; exported protein (100% evalue=7.E-75); Salmonella typhi STY3353 possible exported protein (58.8% evalue=1.E-39); hypothetical protein 3245309 ygiW 2957053 ygiW Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071254.1 3244896 D 273123 CDS YP_071255.1 51597064 2954436 3245878..3248088 1 NC_006155.1 similar to Yersinia pestis YPO3028 autotransporter (99.4% evalue=0); pertactin family virulence factor/autotransporter 3248088 2954436 YPTB2746 Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071255.1 3245878 D 273123 CDS YP_071256.1 51597065 2954437 complement(3248180..3248596) 1 NC_006155.1 similar to Yersinia pestis YPO3029 membrane protein (99.2% evalue=1.E-71); hypothetical protein 3248596 2954437 YPTB2747 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071256.1 3248180 R 273123 CDS YP_071257.1 51597066 2954439 complement(3249394..3250119) 1 NC_006155.1 part of possible compound transposon with IS630; hypothetical protein 3250119 2954439 YPTB2749 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071257.1 3249394 R 273123 CDS YP_071258.1 51597067 2954440 complement(3250122..3250829) 1 NC_006155.1 part of possible compound transposon with IS630; hypothetical protein 3250829 2954440 YPTB2750 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071258.1 3250122 R 273123 CDS YP_071259.1 51597068 2954441 complement(3250826..3251497) 1 NC_006155.1 part of possible compound transposon with IS630; hypothetical protein 3251497 2954441 YPTB2751 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071259.1 3250826 R 273123 CDS YP_071260.1 51597069 2954443 complement(3252467..3252892) 1 NC_006155.1 similar to Yersinia pestis YPO3031 acetyltransferase (100% evalue=8.E-80); Salmonella typhimurium STM2449 acetyltransferase (78% evalue=3.E-64); acetyltransferase 3252892 2954443 YPTB2753 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_071260.1 3252467 R 273123 CDS YP_071261.1 51597070 2955778 3253174..3254103 1 NC_006155.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3254103 hemF 2955778 hemF Yersinia pseudotuberculosis IP 32953 coproporphyrinogen III oxidase YP_071261.1 3253174 D 273123 CDS YP_071262.1 51597071 2954444 3254103..3254561 1 NC_006155.1 similar to Yersinia pestis YPO3033 conserved hypothetical protein (100% evalue=7.E-83); Escherichia coli ECs0436 hypothetical protein (76.9% evalue=3.E-59); hypothetical protein 3254561 2954444 YPTB2755 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071262.1 3254103 D 273123 CDS YP_071263.1 51597072 2955983 complement(3254726..3257005) 1 NC_006155.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3257005 maeB 2955983 maeB Yersinia pseudotuberculosis IP 32953 malic enzyme YP_071263.1 3254726 R 273123 CDS YP_071264.1 51597073 2954445 complement(3257744..3258367) 1 NC_006155.1 similar to Yersinia pestis YPO3035 conserved hypothetical protein (100% evalue=1.E-112); Escherichia coli Z3723 yffH; orf, hypothetical protein (60.7% evalue=1.E-60); hypothetical protein 3258367 2954445 YPTB2757 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071264.1 3257744 R 273123 CDS YP_071265.1 51597074 2956128 complement(3258524..3259123) 1 NC_006155.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC 3259123 napC 2956128 napC Yersinia pseudotuberculosis IP 32953 cytochrome c-type protein NapC YP_071265.1 3258524 R 273123 CDS YP_071266.1 51597075 2956127 complement(3259151..3259618) 1 NC_006155.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit 3259618 napB 2956127 napB Yersinia pseudotuberculosis IP 32953 citrate reductase cytochrome c-type subunit YP_071266.1 3259151 R 273123 CDS YP_071267.1 51597076 2956126 complement(3259701..3262193) 1 NC_006155.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 3262193 napA 2956126 napA Yersinia pseudotuberculosis IP 32953 nitrate reductase catalytic subunit YP_071267.1 3259701 R 273123 CDS YP_071268.1 51597077 2956129 complement(3262190..3262456) 1 NC_006155.1 similar to Yersinia pestis YPO3039 napD; conserved hypothetical protein (100% evalue=2.E-45); Escherichia coli ECs3096 hypothetical protein (55.4% evalue=1.E-19); assembly protein for periplasmic nitrate reductase 3262456 napD 2956129 napD Yersinia pseudotuberculosis IP 32953 assembly protein for periplasmic nitrate reductase YP_071268.1 3262190 R 273123 CDS YP_071269.1 51597078 2956130 complement(3262446..3262949) 1 NC_006155.1 similar to Yersinia pestis YPO3040 napF; ferredoxin-type protein NapF (99.4% evalue=4.E-97); Escherichia coli ECs3097 ferredoxin-type protein (52.8% evalue=6.E-47); ferredoxin-type protein NapF 3262949 napF 2956130 napF Yersinia pseudotuberculosis IP 32953 ferredoxin-type protein NapF YP_071269.1 3262446 R 273123 CDS YP_071270.1 51597079 2956131 3263782..3264411 1 NC_006155.1 similar to Yersinia pestis YPO3041 narP; nitrate/nitrite response regulator protein NarP (100% evalue=1.E-113); Salmonella typhimurium STM2246 narP; response regulator in two-component regulatory system with NarQ (or NarX) (68.6% evalue=2.E-71); nitrate/nitrite response regulator protein NarP 3264411 narP 2956131 narP Yersinia pseudotuberculosis IP 32953 nitrate/nitrite response regulator protein NarP YP_071270.1 3263782 D 273123 CDS YP_071271.1 51597080 2954446 complement(3264424..3264702) 1 NC_006155.1 similar to Yersinia pestis YPO3042 conserved hypothetical protein (100% evalue=7.E-50); Vibrio cholerae VC2149 hypothetical protein (58.2% evalue=3.E-27); hypothetical protein 3264702 2954446 YPTB2764 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071271.1 3264424 R 273123 CDS YP_071272.1 51597081 2954447 3265117..3268248 1 NC_006155.1 similar to Yersinia pestis YPO3043 multidrug efflux protein (99.9% evalue=0); Salmonella typhi STY2719 acrD; efflux pump (80.6% evalue=0); aminoglycoside/multidrug efflux system 3268248 2954447 YPTB2765 Yersinia pseudotuberculosis IP 32953 aminoglycoside/multidrug efflux system YP_071272.1 3265117 D 273123 CDS YP_071273.1 51597082 2954448 3268479..3269063 1 NC_006155.1 similar to Yersinia pestis YPO3044 hypothetical protein (100% evalue=1.E-112); hypothetical protein 3269063 2954448 YPTB2766 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071273.1 3268479 D 273123 CDS YP_071274.1 51597083 2956962 3269352..3269900 1 NC_006155.1 similar to Yersinia pestis YPO3045 ybcI; membrane protein (100% evalue=1.E-102); Salmonella typhimurium STM0540 ybcI; membrane-bound metal-dependent hydrolases (72.6% evalue=5.E-71); hypothetical protein 3269900 ybcI 2956962 ybcI Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071274.1 3269352 D 273123 CDS YP_071275.1 51597084 2954449 complement(3270647..3271822) 1 NC_006155.1 similar to Yersinia pestis YPO3046 sulfatase modifier protein (99.7% evalue=0); Escherichia coli ECs2102 enzyme (66% evalue=1.E-156); sulfatase modifier protein 3271822 2954449 YPTB2768 Yersinia pseudotuberculosis IP 32953 sulfatase modifier protein YP_071275.1 3270647 R 273123 CDS YP_071276.1 51597085 2956988 complement(3271879..3273552) 1 NC_006155.1 similar to Yersinia pestis YPO3047 ydeN; sulfatase (100% evalue=0); Escherichia coli JW1493 hypothetical protein (80% evalue=0); sulfatase 3273552 ydeN 2956988 ydeN Yersinia pseudotuberculosis IP 32953 sulfatase YP_071276.1 3271879 R 273123 CDS YP_071277.1 51597086 2954450 complement(3274030..3275100) 1 NC_006155.1 similar to Yersinia pestis YPO3048 probable ABC-transporter, ATP-binding protein (99.7% evalue=0); Ralstonia solanacearum RS00150 probable ATP-binding ABC transporter protein (69.4% evalue=1.E-133); ABC transporter ATP-binding protein 3275100 2954450 YPTB2770 Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_071277.1 3274030 R 273123 CDS YP_071278.1 51597087 2954451 complement(3275093..3276862) 1 NC_006155.1 similar to Yersinia pestis YPO3049 binding protein-dependent transport system, inner-membrane component (99.8% evalue=0); Ralstonia solanacearum RS00151 transmembrane ABC transporter protein (70.2% evalue=0); iron ABC transporter permease 3276862 2954451 YPTB2771 Yersinia pseudotuberculosis IP 32953 iron ABC transporter permease YP_071278.1 3275093 R 273123 CDS YP_071279.1 51597088 2954452 complement(3276957..3278045) 1 NC_006155.1 similar to Yersinia pestis YPO3050 exported protein (99.7% evalue=0); Ralstonia solanacearum RS00344 periplasmic iron-binding signal peptide protein (62.1% evalue=1.E-125); iron ABC transporter substrate-binding protein 3278045 2954452 YPTB2772 Yersinia pseudotuberculosis IP 32953 iron ABC transporter substrate-binding protein YP_071279.1 3276957 R 273123 CDS YP_071280.1 51597089 2954453 3278356..3278829 1 NC_006155.1 similar to Yersinia pestis YPO3051 conserved hypothetical protein (100% evalue=4.E-83); Listeria innocua lin0965 lin0965 (38.6% evalue=4.E-22); hypothetical protein 3278829 2954453 YPTB2773 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071280.1 3278356 D 273123 CDS YP_071281.1 51597090 2954454 3278989..3279387 1 NC_006155.1 similar to Yersinia pestis YPO3052 conserved hypothetical protein (100% evalue=3.E-74); Escherichia coli ECs3333 hypothetical protein (69.9% evalue=8.E-40); hypothetical protein 3279387 2954454 YPTB2774 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071281.1 3278989 D 273123 CDS YP_071282.1 51597091 2955429 3279389..3280516 1 NC_006155.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3280516 dapE 2955429 dapE Yersinia pseudotuberculosis IP 32953 succinyl-diaminopimelate desuccinylase YP_071282.1 3279389 D 273123 CDS YP_071283.1 51597092 2954455 3280513..3281190 1 NC_006155.1 similar to Yersinia pestis YPO3054 carboxypeptidase (100% evalue=1.E-132); Pasteurella multocida PM1021 hypothetical HI0101 (48.8% evalue=8.E-58); carboxypeptidase 3281190 2954455 YPTB2776 Yersinia pseudotuberculosis IP 32953 carboxypeptidase YP_071283.1 3280513 D 273123 CDS YP_071284.2 229310102 2954456 3281258..3281452 1 NC_006155.1 similar to Yersinia pestis YPO3055 membrane protein (100% evalue=3.E-35); Salmonella typhi STY2722 membrane protein (69.6% evalue=1.E-22); hypothetical protein 3281452 2954456 YPTB2777 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071284.2 3281258 D 273123 CDS YP_071285.1 51597094 2954457 complement(3281700..3283751) 1 NC_006155.1 similar to Yersinia pestis YPO3056 acetyltransferase (99.2% evalue=0); Escherichia coli Z3733 ypfI; orf, hypothetical protein (52.3% evalue=0); acetyltransferase 3283751 2954457 YPTB2778 Yersinia pseudotuberculosis IP 32953 acetyltransferase YP_071285.1 3281700 R 273123 CDS YP_071286.1 51597095 2956998 complement(3283753..3284205) 1 NC_006155.1 similar to Yersinia pestis YPO3057 yeaL; membrane protein (100% evalue=9.E-77); Salmonella typhi STY1838 membrane protein (72.4% evalue=7.E-58); hypothetical protein 3284205 yeaL 2956998 yeaL Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071286.1 3283753 R 273123 CDS YP_071287.1 51597096 2954458 complement(3284299..3285168) 1 NC_006155.1 similar to Yersinia pestis YPO3058 membrane protein (99.6% evalue=1.E-167); Salmonella typhimurium STM2486 inner membrane protein (76.4% evalue=1.E-125); hypothetical protein 3285168 2954458 YPTB2780 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071287.1 3284299 R 273123 CDS YP_071288.1 51597097 2956368 complement(3285387..3286100) 1 NC_006155.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3286100 purC 2956368 purC Yersinia pseudotuberculosis IP 32953 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_071288.1 3285387 R 273123 CDS YP_071289.1 51597098 2955431 complement(3286171..3287229) 1 NC_006155.1 similar to Yersinia pestis YPO3061 dapX, nlpB; lipoprotein (99.7% evalue=0); Salmonella typhimurium STM2488 nlpB; lipoprotein-34 (62% evalue=1.E-120); lipoprotein 3287229 dapX 2955431 dapX Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071289.1 3286171 R 273123 CDS YP_071290.1 51597099 2955426 complement(3287247..3288146) 1 NC_006155.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3288146 dapA 2955426 dapA Yersinia pseudotuberculosis IP 32953 dihydrodipicolinate synthase YP_071290.1 3287247 R 273123 CDS YP_071291.2 161760565 2955681 3288293..3288862 1 NC_006155.1 negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 3288862 gcvR 2955681 gcvR Yersinia pseudotuberculosis IP 32953 glycine cleavage system transcriptional repressor YP_071291.2 3288293 D 273123 CDS YP_071292.1 51597101 2955274 3288865..3289335 1 NC_006155.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3289335 bcp 2955274 bcp Yersinia pseudotuberculosis IP 32953 thioredoxin-dependent thiol peroxidase YP_071292.1 3288865 D 273123 CDS YP_071293.1 51597102 2954459 complement(3289579..3289998) 1 NC_006155.1 similar to Yersinia pestis YPO3065 exported protein, 100% identical; hypothetical protein 3289998 2954459 YPTB2786 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071293.1 3289579 R 273123 CDS YP_071294.1 51597103 2954460 complement(3290002..3290697) 1 NC_006155.1 similar to Yersinia pestis YPO3066 hypothetical protein (99.1% evalue=1.E-133); hypothetical protein 3290697 2954460 YPTB2787 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071294.1 3290002 R 273123 CDS YP_071295.1 51597104 2954461 3291035..3291208 1 NC_006155.1 similar to Yersinia pestis YPO3067 hypothetical protein, 100% identical.; hypothetical protein 3291208 2954461 YPTB2788 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071295.1 3291035 D 273123 CDS YP_071296.1 51597105 2956237 complement(3291297..3292361) 1 NC_006155.1 similar to Yersinia pestis YPO3068 perM; membrane protein (100% evalue=0); Salmonella typhimurium STM2493 perM; PerM family permease (77.6% evalue=1.E-161); permease 3292361 perM 2956237 perM Yersinia pseudotuberculosis IP 32953 permease YP_071296.1 3291297 R 273123 CDS YP_071297.1 51597106 2954462 3292692..3294176 1 NC_006155.1 similar to Yersinia pestis YPO3069 exported protein (99.3% evalue=0); Escherichia coli b2494 hypothetical protein (69.3% evalue=0); hypothetical protein 3294176 2954462 YPTB2790 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071297.1 3292692 D 273123 CDS YP_071298.1 51597107 2957026 3294283..3294639 1 NC_006155.1 similar to Yersinia pestis YPO3070 yfgD; arsenate reductase (100% evalue=8.E-62); Escherichia coli ECs3357 oxidoreductase (67.2% evalue=4.E-40); arsenate reductase 3294639 yfgD 2957026 yfgD Yersinia pseudotuberculosis IP 32953 arsenate reductase YP_071298.1 3294283 D 273123 CDS YP_071299.2 161760564 2954463 complement(3294852..3295571) 1 NC_006155.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 3295571 2954463 YPTB2792 Yersinia pseudotuberculosis IP 32953 DNA replication initiation factor YP_071299.2 3294852 R 273123 CDS YP_071300.1 51597109 2954464 complement(3295818..3297104) 1 NC_006155.1 similar to Escherichia coli ECs3359 uracil transport (89.3% evalue=0); Escherichia coli Z3760 uraA; uracil transport (89.3% evalue=0); uracil transporter 3297104 2954464 YPTB2793 Yersinia pseudotuberculosis IP 32953 uracil transporter YP_071300.1 3295818 R 273123 CDS YP_071301.1 51597110 2956868 complement(3297261..3297887) 1 NC_006155.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3297887 upp 2956868 upp Yersinia pseudotuberculosis IP 32953 uracil phosphoribosyltransferase YP_071301.1 3297261 R 273123 CDS YP_071302.1 51597111 2956373 3298322..3299365 1 NC_006155.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3299365 purI 2956373 purI Yersinia pseudotuberculosis IP 32953 phosphoribosylaminoimidazole synthetase YP_071302.1 3298322 D 273123 CDS YP_071303.1 51597112 2956376 3299480..3300118 1 NC_006155.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3300118 purN 2956376 purN Yersinia pseudotuberculosis IP 32953 phosphoribosylglycinamide formyltransferase YP_071303.1 3299480 D 273123 CDS YP_071304.1 51597113 2956627 3300347..3300892 1 NC_006155.1 similar to Yersinia pestis YPO2830 speG; spermidine acetyltransferase (100% evalue=1.E-102); Escherichia coli JW1576 speG; diamine N-acetyltransferase (80.1% evalue=5.E-80); spermidine acetyltransferase 3300892 speG 2956627 speG Yersinia pseudotuberculosis IP 32953 spermidine acetyltransferase YP_071304.1 3300347 D 273123 CDS YP_071305.1 51597114 2955593 complement(3300986..3302146) 1 NC_006155.1 similar to Salmonella typhimurium STM1958 fliB; N-methylation of lysine residues in flagellin (30% evalue=1.E-52); C. perfringens CPE0799 hypothetical protein (23.4% evalue=3.E-14); N-methylation of lysine residues in flagellin 3302146 fliB 2955593 fliB Yersinia pseudotuberculosis IP 32953 N-methylation of lysine residues in flagellin YP_071305.1 3300986 R 273123 CDS YP_071306.1 51597115 2956350 complement(3302379..3303191) 1 NC_006155.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3303191 pstb 2956350 pstb Yersinia pseudotuberculosis IP 32953 phosphate transporter ATP-binding protein YP_071306.1 3302379 R 273123 CDS YP_071307.1 51597116 2956347 complement(3303219..3304931) 1 NC_006155.1 similar to Yersinia pestis YPO2834 pstA; phosphate transport system permease (99.8% evalue=0); Vibrio cholerae VC0725 phosphate transport system permease (52.7% evalue=1.E-158); phosphate ABC transporter permease 3304931 pstA 2956347 pstA Yersinia pseudotuberculosis IP 32953 phosphate ABC transporter permease YP_071307.1 3303219 R 273123 CDS YP_071308.1 51597117 2956352 complement(3304931..3307162) 1 NC_006155.1 similar to Yersinia pestis YPO2835 pstC; phosphate transport system permease (99.5% evalue=0); Pseudomonas aeruginosa PA5368 pstC; phosphate transport system permease (42.2% evalue=1.E-137); phosphate ABC transporter permease 3307162 pstC 2956352 pstC Yersinia pseudotuberculosis IP 32953 phosphate ABC transporter permease YP_071308.1 3304931 R 273123 CDS YP_071309.1 51597118 2956310 3307433..3309496 1 NC_006155.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3309496 ppk 2956310 ppk Yersinia pseudotuberculosis IP 32953 polyphosphate kinase YP_071309.1 3307433 D 273123 CDS YP_071310.1 51597119 2956312 3309507..3311066 1 NC_006155.1 similar to Yersinia pestis YPO2837 ppx; exopolyphosphatase (100% evalue=0); Salmonella typhi STY2743 ppx; exopolyphosphatase (77.3% evalue=0); exopolyphosphatase 3311066 ppx 2956312 ppx Yersinia pseudotuberculosis IP 32953 exopolyphosphatase YP_071310.1 3309507 D 273123 CDS YP_071311.1 51597120 2957027 3311231..3311443 1 NC_006155.1 similar to Yersinia pestis YPO2838 yfgG; exported protein (98.5% evalue=9.E-33); hypothetical protein 3311443 yfgG 2957027 yfgG Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071311.1 3311231 D 273123 CDS YP_071312.1 51597121 2956040 3311495..3312970 1 NC_006155.1 similar to Yersinia pestis YPO2839 mgtE; divalent cation transport protein (100% evalue=0); Pseudomonas aeruginosa PA0913 mgtE; probable Mg transporter MgtE (54.3% evalue=1.E-139); divalent cation (Mg++/Co++/Ni++) transport protein 3312970 mgtE 2956040 mgtE Yersinia pseudotuberculosis IP 32953 divalent cation (Mg++/Co++/Ni++) transport protein YP_071312.1 3311495 D 273123 CDS YP_071313.1 51597122 2954465 3313107..3314462 1 NC_006155.1 similar to Yersinia pestis YPO2840 heat shock protein (99.5% evalue=0); Escherichia coli ECs2878 heat shock protein (72.4% evalue=0); chaperone 3314462 2954465 YPTB2806 Yersinia pseudotuberculosis IP 32953 chaperone YP_071313.1 3313107 D 273123 CDS YP_071314.1 51597123 2954466 complement(3314734..3315582) 1 NC_006155.1 similar to Yersinia pestis YPO2841 ABC transporter permease (100% evalue=1.E-154); Pseudomonas aeruginosa PA0606 spermidine/putrescine transport system permease (65.3% evalue=8.E-91); opine/polyamine ABC transporter permease 3315582 2954466 YPTB2807 Yersinia pseudotuberculosis IP 32953 opine/polyamine ABC transporter permease YP_071314.1 3314734 R 273123 CDS YP_071315.1 51597124 2954467 complement(3315644..3316909) 1 NC_006155.1 similar to Yersinia pestis YPO2842 ABC transporter permease (99.7% evalue=0); Pseudomonas aeruginosa PA0605 spermidine/putrescine transport system permease (54.5% evalue=1.E-121); opine/polyamine ABC transporter permease 3316909 2954467 YPTB2808 Yersinia pseudotuberculosis IP 32953 opine/polyamine ABC transporter permease YP_071315.1 3315644 R 273123 CDS YP_071316.1 51597125 2954468 complement(3316956..3317984) 1 NC_006155.1 similar to Yersinia pestis YPO2843 transport system periplasmic protein (99.4% evalue=0); Pseudomonas aeruginosa PA0222 spermidine/putrescine transport system substrate-binding protein (56.1% evalue=1.E-116); opine/polyamine ABC transporter substrate-binding protein 3317984 2954468 YPTB2809 Yersinia pseudotuberculosis IP 32953 opine/polyamine ABC transporter substrate-binding protein YP_071316.1 3316956 R 273123 CDS YP_071317.1 51597126 2955736 complement(3318037..3319350) 1 NC_006155.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 3319350 goaG 2955736 goaG Yersinia pseudotuberculosis IP 32953 4-aminobutyrate aminotransferase YP_071317.1 3318037 R 273123 CDS YP_071318.1 51597127 2954469 3319508..3321013 1 NC_006155.1 similar to Yersinia pestis YPO2845 GntR-family regulatory protein (99.6% evalue=0); Ralstonia solanacearum RS01853 transcription regulator protein (47% evalue=1.E-124); GntR family transcriptional regulator 3321013 2954469 YPTB2811 Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_071318.1 3319508 D 273123 CDS YP_071319.1 51597128 2954470 3321396..3322481 1 NC_006155.1 similar to Yersinia pestis YPO2846 putitive ABC-transporter ATP-binding protein (99.7% evalue=0); Pseudomonas aeruginosa PA0603 spermidine/putrescine transport system ATP-binding protein (60.7% evalue=1.E-119); opine/polyamine ABC transporter ATP-binding protein 3322481 2954470 YPTB2812 Yersinia pseudotuberculosis IP 32953 opine/polyamine ABC transporter ATP-binding protein YP_071319.1 3321396 D 273123 CDS YP_071320.2 161760563 2957008 3322883..3324217 1 NC_006155.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3324217 yegM 2957008 yegM Yersinia pseudotuberculosis IP 32953 multidrug efflux system subunit MdtA YP_071320.2 3322883 D 273123 CDS YP_071321.1 51597130 2957009 3324217..3327375 1 NC_006155.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3327375 yegN 2957009 yegN Yersinia pseudotuberculosis IP 32953 multidrug efflux system subunit MdtB YP_071321.1 3324217 D 273123 CDS YP_071322.1 51597131 2957010 3327372..3330446 1 NC_006155.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3330446 yegO 2957010 yegO Yersinia pseudotuberculosis IP 32953 multidrug efflux system subunit MdtC YP_071322.1 3327372 D 273123 CDS YP_071323.1 51597132 2957007 3330480..3331877 1 NC_006155.1 similar to Yersinia pestis YPO2850 yegB; membrane protein (99.7% evalue=0); Escherichia coli JW2062 yegB; Hypothetical protein (72.3% evalue=0); multidrug efflux system protein MdtE 3331877 yegB 2957007 yegB Yersinia pseudotuberculosis IP 32953 multidrug efflux system protein MdtE YP_071323.1 3330480 D 273123 CDS YP_071324.1 51597133 2955270 3331908..3333293 1 NC_006155.1 similar to Salmonella typhi STY2343 baeS; two-component system sensor kinase (66.8% evalue=1.E-171); Salmonella typhimurium STM2130 baeS; sensory kinase in two-component regulatoyr system wtih BaeR (67.2% evalue=1.E-173); signal transduction histidine-protein kinase BaeS 3333293 baeS 2955270 baeS Yersinia pseudotuberculosis IP 32953 signal transduction histidine-protein kinase BaeS YP_071324.1 3331908 D 273123 CDS YP_071325.1 51597134 2955269 3333303..3334022 1 NC_006155.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3334022 baeR 2955269 baeR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator BaeR YP_071325.1 3333303 D 273123 CDS YP_071326.1 51597135 2954471 3334159..3334497 1 NC_006155.1 similar to Yersinia pestis YPO2854 conserved hypothetical protein (100% evalue=4.E-58); Pasteurella multocida PM0519 hypothetical Escherichia coli (61.2% evalue=2.E-32); hypothetical protein 3334497 2954471 YPTB2819 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071326.1 3334159 D 273123 CDS YP_071327.1 51597136 2954472 3334795..3336189 1 NC_006155.1 similar to Yersinia pestis YPO2855 protease (100% evalue=0); Escherichia coli JW2066 yegQ; protease (83.4% evalue=0); protease 3336189 2954472 YPTB2820 Yersinia pseudotuberculosis IP 32953 protease YP_071327.1 3334795 D 273123 CDS YP_071328.1 51597137 2954473 3336826..3337716 1 NC_006155.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 3337716 2954473 YPTB2821 Yersinia pseudotuberculosis IP 32953 lipid kinase YP_071328.1 3336826 D 273123 CDS YP_071329.1 51597138 2954474 complement(3338003..3338512) 1 NC_006155.1 similar to Yersinia pestis YPO2857 exported protein (99.3% evalue=5.E-89); Pseudomonas aeruginosa PA3902 hypothetical protein (42.8% evalue=3.E-30); hypothetical protein 3338512 2954474 YPTB2822 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071329.1 3338003 R 273123 CDS YP_071330.1 51597139 2954475 3338743..3339663 1 NC_006155.1 similar to Yersinia pestis YPO2858 hypothetical protein (97.9% evalue=1.E-140); hypothetical protein 3339663 2954475 YPTB2823 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071330.1 3338743 D 273123 CDS YP_071331.1 51597140 2956689 complement(3339691..3340491) 1 NC_006155.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 3340491 thiD 2956689 thiD Yersinia pseudotuberculosis IP 32953 phosphomethylpyrimidine kinase YP_071331.1 3339691 R 273123 CDS YP_071332.1 51597141 2954476 3341001..3341480 1 NC_006155.1 similar to Yersinia pestis YPO3895 membrane protein (52.8% evalue=1.E-48); hypothetical protein 3341480 2954476 YPTB2825 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071332.1 3341001 D 273123 CDS YP_071333.1 51597142 2954477 3341539..3342459 1 NC_006155.1 similar to Yersinia pestis YPO4106 hypothetical protein (54.1% evalue=8.E-55); hypothetical protein 3342459 2954477 YPTB2826 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071333.1 3341539 D 273123 CDS YP_071334.1 51597143 2954478 3342456..3342851 1 NC_006155.1 similar to Yersinia pestis YPO2864 membrane protein, 100% identical.; hypothetical protein 3342851 2954478 YPTB2827 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071334.1 3342456 D 273123 CDS YP_071335.1 51597144 2954479 3342915..3343310 1 NC_006155.1 similar to Yersinia pestis YPO2865 membrane protein, 93% identical; hypothetical protein 3343310 2954479 YPTB2828 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071335.1 3342915 D 273123 CDS YP_071336.1 51597145 2954480 3343348..3343767 1 NC_006155.1 similar to Yersinia pestis YPO2866 membrane protein (73.3% evalue=1.E-54); hypothetical protein 3343767 2954480 YPTB2829 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071336.1 3343348 D 273123 CDS YP_071337.1 51597146 2954481 3343831..3344229 1 NC_006155.1 similar to Yersinia pestis YPO2868 conserved hypothetical protein, 92% identical.; hypothetical protein 3344229 2954481 YPTB2830 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071337.1 3343831 D 273123 CDS YP_071338.1 51597147 2954482 3344253..3344732 1 NC_006155.1 similar to Yersinia pestis YPO2868 conserved hypothetical protein, 99% identical; hypothetical protein 3344732 2954482 YPTB2831 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071338.1 3344253 D 273123 CDS YP_071339.1 51597148 2955762 complement(3345011..3346588) 1 NC_006155.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3346588 guaA 2955762 guaA Yersinia pseudotuberculosis IP 32953 GMP synthase YP_071339.1 3345011 R 273123 CDS YP_071340.1 51597149 2955763 complement(3346768..3348315) 1 NC_006155.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3348315 guaB 2955763 guaB Yersinia pseudotuberculosis IP 32953 inosine 5'-monophosphate dehydrogenase YP_071340.1 3346768 R 273123 CDS YP_071341.1 51597150 2956909 3348401..3349780 1 NC_006155.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3349780 xseA 2956909 xseA Yersinia pseudotuberculosis IP 32953 exodeoxyribonuclease VII large subunit YP_071341.1 3348401 D 273123 CDS YP_071342.1 51597151 2954483 complement(3349952..3350176) 1 NC_006155.1 similar to Yersinia pestis YPO2873 conserved hypothetical protein (97.2% evalue=1.E-41); Salmonella typhi STY2763a conserved hypothetical protein (61.7% evalue=2.E-21); hypothetical protein 3350176 2954483 YPTB2835 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071342.1 3349952 R 273123 CDS YP_071343.1 51597152 2954484 complement(3350225..3351181) 1 NC_006155.1 similar to Yersinia pestis YPO2874 membrane protein (99.3% evalue=1.E-174); Vibrio cholerae VCA0024 conserved hypothetical protein (43.4% evalue=3.E-67); malate permease 3351181 2954484 YPTB2836 Yersinia pseudotuberculosis IP 32953 malate permease YP_071343.1 3350225 R 273123 CDS YP_071344.1 51597153 2955506 complement(3351528..3353015) 1 NC_006155.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3353015 engA 2955506 engA Yersinia pseudotuberculosis IP 32953 GTP-binding protein EngA YP_071344.1 3351528 R 273123 CDS YP_071345.1 51597154 2957028 complement(3353163..3354344) 1 NC_006155.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 3354344 yfgL 2957028 yfgL Yersinia pseudotuberculosis IP 32953 outer membrane protein assembly complex subunit YfgL YP_071345.1 3353163 R 273123 CDS YP_071346.1 51597155 2957029 complement(3354356..3354991) 1 NC_006155.1 similar to Yersinia pestis YPO2877 yfgM; membrane protein (99.5% evalue=1.E-112); Salmonella typhimurium STM2521 yfgM; inner membrane protein (58.5% evalue=1.E-64); hypothetical protein 3354991 yfgM 2957029 yfgM Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071346.1 3354356 R 273123 CDS YP_071347.1 51597156 2955801 complement(3355005..3356279) 1 NC_006155.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3356279 hisS 2955801 hisS Yersinia pseudotuberculosis IP 32953 histidyl-tRNA synthetase YP_071347.1 3355005 R 273123 CDS YP_071348.1 51597157 2955150 complement(3356488..3357615) 1 NC_006155.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3357615 ispG 2955150 ispG Yersinia pseudotuberculosis IP 32953 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_071348.1 3356488 R 273123 CDS YP_071349.1 51597158 2957025 complement(3357719..3358807) 1 NC_006155.1 similar to Yersinia pestis YPO2880 yfgA; DNA-binding protein (92.8% evalue=0); Salmonella typhimurium STM2524 yfgA; paral membrane protein (57.9% evalue=1.E-106); cytoskeletal protein RodZ 3358807 yfgA 2957025 yfgA Yersinia pseudotuberculosis IP 32953 cytoskeletal protein RodZ YP_071349.1 3357719 R 273123 CDS YP_071350.1 51597159 2954485 complement(3358797..3359546) 1 NC_006155.1 similar to Yersinia pestis YPO2881 fimbrial biogenesis protein (99.5% evalue=1.E-139); Vibrio cholerae VC1612 fimbrial biogenesis and twitching motility protein, (37.1% evalue=2.E-30); fimbrial biogenesis protein 3359546 2954485 YPTB2843 Yersinia pseudotuberculosis IP 32953 fimbrial biogenesis protein YP_071350.1 3358797 R 273123 CDS YP_071351.1 51597160 2954486 complement(3359700..3360896) 1 NC_006155.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 3360896 2954486 YPTB2844 Yersinia pseudotuberculosis IP 32953 ribosomal RNA large subunit methyltransferase N YP_071351.1 3359700 R 273123 CDS YP_071352.1 51597161 2956134 complement(3361158..3361586) 1 NC_006155.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3361586 ndk 2956134 ndk Yersinia pseudotuberculosis IP 32953 nucleoside diphosphate kinase YP_071352.1 3361158 R 273123 CDS YP_071353.1 51597162 2954487 complement(3361914..3364334) 1 NC_006155.1 similar to Yersinia pestis YPO2884 exported protein (94.9% evalue=0); hypothetical protein 3364334 2954487 YPTB2846 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071353.1 3361914 R 273123 CDS YP_071354.1 51597163 2954488 3364509..3364766 1 NC_006155.1 similar to Yersinia pestis YPO2885 hypothetical protein (96.4% evalue=5.E-41); hypothetical protein 3364766 2954488 YPTB2847 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071354.1 3364509 D 273123 CDS YP_071355.1 51597164 2956946 3365050..3369399 1 NC_006155.1 similar to Yersinia pestis YPO2886 yapA; autotransporter protein (79% evalue=0); Escherichia coli JW2628 ypjA; Hypothetical protein (f949) (27.1% evalue=8.E-79); pertactin family virulence factor/autotransporter 3369399 yapA 2956946 yapA Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071355.1 3365050 D 273123 CDS YP_071356.1 51597165 2956948 3369957..3373322 1 NC_006155.1 similar to Yersinia pestis YPO2886 yapA; autotransporter protein (43.2% evalue=0); pertactin family virulence factor/autotransporter 3373322 yapB2 2956948 yapB2 Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071356.1 3369957 D 273123 CDS YP_071357.1 51597166 2956947 3373929..3377444 1 NC_006155.1 similar to Yersinia pestis YPO2886 yapA; autotransporter protein (38.8% evalue=0); Escherichia coli Z3449 yejO; ATP-binding component of a transport system (26.9% evalue=1.E-68); pertactin family virulence factor/autotransporter 3377444 yapB1 2956947 yapB1 Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071357.1 3373929 D 273123 CDS YP_071358.1 51597167 2954489 complement(3377529..3378482) 1 NC_006155.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 3378482 2954489 YPTB2851 Yersinia pseudotuberculosis IP 32953 enhanced serine sensitivity protein SseB YP_071358.1 3377529 R 273123 CDS YP_071359.1 51597168 2956231 complement(3378561..3379859) 1 NC_006155.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase 3379859 pepB 2956231 pepB Yersinia pseudotuberculosis IP 32953 aminopeptidase YP_071359.1 3378561 R 273123 CDS YP_071360.1 51597169 2954490 complement(3379999..3380199) 1 NC_006155.1 similar to Yersinia pestis YPO2890 conserved hypothetical protein (100% evalue=2.E-34); Escherichia coli JW2508 yfhJ; Hypothetical protein (77.2% evalue=3.E-26); hypothetical protein 3380199 2954490 YPTB2853 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071360.1 3379999 R 273123 CDS YP_071361.1 51597170 2955540 complement(3380229..3380564) 1 NC_006155.1 similar to Yersinia pestis YPO2891 fdx; adrenodoxin family ferredoxin (100% evalue=3.E-62); Escherichia coli JW2509 fdx; Ferredoxin [2Fe-2S] (91.8% evalue=3.E-57); ferredoxin 3380564 fdx 2955540 fdx Yersinia pseudotuberculosis IP 32953 ferredoxin YP_071361.1 3380229 R 273123 CDS YP_071362.1 51597171 2955836 complement(3380567..3382501) 1 NC_006155.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 3382501 hscA 2955836 hscA Yersinia pseudotuberculosis IP 32953 chaperone protein HscA YP_071362.1 3380567 R 273123 CDS YP_071363.1 51597172 2955837 complement(3382744..3383268) 1 NC_006155.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 3383268 hscB 2955837 hscB Yersinia pseudotuberculosis IP 32953 co-chaperone HscB YP_071363.1 3382744 R 273123 CDS YP_071364.1 51597173 2954491 complement(3383379..3383702) 1 NC_006155.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 3383702 iscA 2954491 iscA Yersinia pseudotuberculosis IP 32953 iron-sulfur cluster assembly protein YP_071364.1 3383379 R 273123 CDS YP_071365.1 51597174 2956141 complement(3383972..3384358) 1 NC_006155.1 similar to Yersinia pestis YPO2895 nifU; NifU family protein (99.2% evalue=2.E-68); Escherichia coli Z3796 hypothetical protein (89% evalue=1.E-61); scaffold protein 3384358 nifU 2956141 nifU Yersinia pseudotuberculosis IP 32953 scaffold protein YP_071365.1 3383972 R 273123 CDS YP_071366.1 51597175 2955897 complement(3384389..3385618) 1 NC_006155.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 3385618 iscS 2955897 iscS Yersinia pseudotuberculosis IP 32953 cysteine desulfurase YP_071366.1 3384389 R 273123 CDS YP_071367.1 51597176 2954492 complement(3385672..3386166) 1 NC_006155.1 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 3386166 2954492 YPTB2860 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator IscR YP_071367.1 3385672 R 273123 CDS YP_071368.1 51597177 2954493 complement(3386322..3387095) 1 NC_006155.1 similar to Yersinia pestis YPO2898 SpoU-family rRNA methylase (100% evalue=1.E-144); Salmonella typhi STY2791 RNA methyltransferase (81.8% evalue=1.E-109); SpoU family rRNA methylase 3387095 2954493 YPTB2861 Yersinia pseudotuberculosis IP 32953 SpoU family rRNA methylase YP_071368.1 3386322 R 273123 CDS YP_071369.1 51597178 2956651 3387214..3388017 1 NC_006155.1 similar to Yersinia pestis YPO2899 suhB; myo-inositol-1(or 4)-monophosphatase (100% evalue=1.E-151); Escherichia coli b2533 suhB, ssyA; myo-inositol-1(or 4)-monophosphatase (83.8% evalue=1.E-129); inositol monophosphatase 3388017 suhB 2956651 suhB Yersinia pseudotuberculosis IP 32953 inositol monophosphatase YP_071369.1 3387214 D 273123 CDS YP_071370.1 51597179 2954494 complement(3388116..3389138) 1 NC_006155.1 similar to Yersinia pestis YPO2901 membrane protein (99.7% evalue=0); Salmonella typhimurium STM2551 inner membrane protein (55% evalue=7.E-98); hypothetical protein 3389138 2954494 YPTB2863 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071370.1 3388116 R 273123 CDS YP_071371.1 51597180 2954495 complement(3389129..3389803) 1 NC_006155.1 similar to Yersinia pestis YPO2902 exported protein (99.5% evalue=1.E-125); Salmonella typhimurium STM2552 periplasmic or exported protein (55.3% evalue=2.E-62); hypothetical protein 3389803 2954495 YPTB2864 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071371.1 3389129 R 273123 CDS YP_071372.1 51597181 2954496 3389945..3391306 1 NC_006155.1 similar to Yersinia pestis YPO2903 RNA-binding protein (100% evalue=0); Escherichia coli b2535 csiE; stationary phase inducible protein csiE (37.4% evalue=5.E-81); stationary phase inducible protein CsiE 3391306 2954496 YPTB2865 Yersinia pseudotuberculosis IP 32953 stationary phase inducible protein CsiE YP_071372.1 3389945 D 273123 CDS YP_071373.1 51597182 2955770 complement(3391303..3392460) 1 NC_006155.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 3392460 hcaT 2955770 hcaT Yersinia pseudotuberculosis IP 32953 3-phenylpropionic acid transporter YP_071373.1 3391303 R 273123 CDS YP_071374.1 51597183 2955182 complement(3392902..3393450) 1 NC_006155.1 similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (99.4% evalue=1.E-101); attachment invasion locus protein 3393450 ail 2955182 ail Yersinia pseudotuberculosis IP 32953 attachment invasion locus protein YP_071374.1 3392902 R 273123 CDS YP_071375.1 51597184 2954497 complement(3393559..3393780) 1 NC_006155.1 similar to Yersinia pestis YPO2906 membrane protein, 100% identical; hypothetical protein 3393780 2954497 YPTB2868 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071375.1 3393559 R 273123 CDS YP_071376.1 51597185 2955727 complement(3393893..3395146) 1 NC_006155.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3395146 glyA 2955727 glyA Yersinia pseudotuberculosis IP 32953 serine hydroxymethyltransferase YP_071376.1 3393893 R 273123 CDS YP_071377.1 51597186 2955804 3395687..3396877 1 NC_006155.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 3396877 hmp 2955804 hmp Yersinia pseudotuberculosis IP 32953 nitric oxide dioxygenase YP_071377.1 3395687 D 273123 CDS YP_071378.1 51597187 2957063 3397341..3398240 1 NC_006155.1 similar to Escherichia coli b3383 yhfZ; hypothetical 25.4 kD protein in cysG-trpS intergenic region (F228) (52.4% evalue=1.E-62); Escherichia coli JW3346 yhfZ; Hypothetical protein (52.4% evalue=1.E-62); hypothetical protein 3398240 yhfZ 2957063 yhfZ Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071378.1 3397341 D 273123 CDS YP_071379.1 51597188 2955696 complement(3398422..3398760) 1 NC_006155.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 3398760 glnB 2955696 glnB Yersinia pseudotuberculosis IP 32953 nitrogen regulatory protein P-II 1 YP_071379.1 3398422 R 273123 CDS YP_071380.1 51597189 2956117 complement(3398775..3400397) 1 NC_006155.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 3400397 nadE 2956117 nadE Yersinia pseudotuberculosis IP 32953 NAD synthetase YP_071380.1 3398775 R 273123 CDS YP_071381.1 51597190 2954498 complement(3400557..3401894) 1 NC_006155.1 similar to Yersinia pestis YPO2914 two-component system response regulator (100% evalue=0); Salmonella typhimurium STM2562 yfhA; transcriptional regulator of two-component regulator protein (EBP familiiy) (87.1% evalue=0); two-component system response regulator 3401894 2954498 YPTB2874 Yersinia pseudotuberculosis IP 32953 two-component system response regulator YP_071381.1 3400557 R 273123 CDS YP_071382.1 51597191 2954499 complement(3401857..3402969) 1 NC_006155.1 similar to Yersinia pestis YPO2915 lipoprotein (94.7% evalue=0); Escherichia coli JW2539 yfhG; Hypothetical protein (ORF-1) (46.1% evalue=8.E-45); hypothetical protein 3402969 2954499 YPTB2875 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071382.1 3401857 R 273123 CDS YP_071383.1 51597192 2954500 complement(3402973..3404409) 1 NC_006155.1 similar to Yersinia pestis YPO2916 two-component system sensor kinase (99.7% evalue=0); Salmonella typhimurium STM2564 yfhK; sensory kinase in regulatory system (72.4% evalue=0); two-component system sensor kinase 3404409 2954500 YPTB2876 Yersinia pseudotuberculosis IP 32953 two-component system sensor kinase YP_071383.1 3402973 R 273123 CDS YP_071384.1 51597193 2954501 3405604..3406164 1 NC_006155.1 similar to Yersinia pestis YPO2919 hypothetical protein (26.9% evalue=7.E-08); hypothetical protein 3406164 2954501 YPTB2877 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071384.1 3405604 D 273123 CDS YP_071385.1 51597194 2954502 3406487..3407065 1 NC_006155.1 similar to Yersinia pestis YPO2919 hypothetical protein (99.4% evalue=1.E-106); hypothetical protein 3407065 2954502 YPTB2878 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071385.1 3406487 D 273123 CDS YP_071386.1 51597195 2956375 complement(3407482..3411372) 1 NC_006155.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 3411372 purL 2956375 purL Yersinia pseudotuberculosis IP 32953 phosphoribosylformylglycinamidine synthase YP_071386.1 3407482 R 273123 CDS YP_071387.1 51597196 2954503 3411607..3413148 1 NC_006155.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 3413148 2954503 YPTB2880 Yersinia pseudotuberculosis IP 32953 transglycosylase YP_071387.1 3411607 D 273123 CDS YP_071388.1 51597197 2954504 complement(3413275..3413838) 1 NC_006155.1 similar to Yersinia pestis YPO2923 zinc-binding protein (99.3% evalue=8.E-86); Escherichia coli b2559 yfhC; hypothetical 20.0 kD protein in purL-dpj intergenic region (ORF178) (71% evalue=6.E-65); tRNA-specific adenosine deaminase 3413838 2954504 YPTB2881 Yersinia pseudotuberculosis IP 32953 tRNA-specific adenosine deaminase YP_071388.1 3413275 R 273123 CDS YP_071389.1 51597198 2957030 complement(3413948..3414595) 1 NC_006155.1 similar to Yersinia pestis YPO2924 yfhB; membrane protein (99.5% evalue=1.E-122); Salmonella typhimurium STM2569 yfhB; putatative phosphoserine phosphatase (69.4% evalue=9.E-80); hypothetical protein 3414595 yfhB 2957030 yfhB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071389.1 3413948 R 273123 CDS YP_071390.1 51597199 2954505 complement(3414870..3415757) 1 NC_006155.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 3415757 murQ 2954505 murQ Yersinia pseudotuberculosis IP 32953 N-acetylmuramic acid 6-phosphate etherase YP_071390.1 3414870 R 273123 CDS YP_071391.1 51597200 2954506 3415965..3416804 1 NC_006155.1 similar to Yersinia pestis YPO2926 RpiR-family transcriptional regulatory protein (100% evalue=1.E-148); Salmonella typhimurium STM2572 yfhH; ABC superfamily (membrane) transport protein (62.4% evalue=2.E-93); DNA-binding transcriptional regulator 3416804 2954506 YPTB2884 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_071391.1 3415965 D 273123 CDS YP_071392.1 51597201 2955541 3416966..3417226 1 NC_006155.1 similar to Yersinia pestis YPO2927 fdx; [4Fe-4S] ferredoxin (100% evalue=3.E-49); Salmonella typhi STY2822 ferredoxin (80.2% evalue=4.E-38); [4Fe-4S] ferredoxin 3417226 fdx 2955541 fdx Yersinia pseudotuberculosis IP 32953 [4Fe-4S] ferredoxin YP_071392.1 3416966 D 273123 CDS YP_071393.1 51597202 2955169 complement(3417332..3417712) 1 NC_006155.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3417712 acpS 2955169 acpS Yersinia pseudotuberculosis IP 32953 4'-phosphopantetheinyl transferase YP_071393.1 3417332 R 273123 CDS YP_071394.1 51597203 2956225 complement(3417712..3418443) 1 NC_006155.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3418443 pdxJ 2956225 pdxJ Yersinia pseudotuberculosis IP 32953 pyridoxine 5'-phosphate synthase YP_071394.1 3417712 R 273123 CDS YP_071395.1 51597204 2956420 complement(3418602..3419327) 1 NC_006155.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 3419327 recO 2956420 recO Yersinia pseudotuberculosis IP 32953 DNA repair protein RecO YP_071395.1 3418602 R 273123 CDS YP_071396.1 51597205 2955510 complement(3419337..3420248) 1 NC_006155.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3420248 era 2955510 era Yersinia pseudotuberculosis IP 32953 GTP-binding protein Era YP_071396.1 3419337 R 273123 CDS YP_071397.1 51597206 2956467 complement(3420245..3420925) 1 NC_006155.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 3420925 rnc 2956467 rnc Yersinia pseudotuberculosis IP 32953 ribonuclease III YP_071397.1 3420245 R 273123 CDS YP_071398.1 51597207 2955938 complement(3421277..3422275) 1 NC_006155.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 3422275 lepB 2955938 lepB Yersinia pseudotuberculosis IP 32953 signal peptidase I YP_071398.1 3421277 R 273123 CDS YP_071399.1 51597208 2955937 complement(3422285..3424084) 1 NC_006155.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3424084 lepA 2955937 lepA Yersinia pseudotuberculosis IP 32953 GTP-binding protein LepA YP_071399.1 3422285 R 273123 CDS YP_071400.1 51597209 2954507 3424584..3425351 1 NC_006155.1 similar to Yersinia pestis YPO2715 membrane protein (94.4% evalue=1.E-133); hypothetical protein 3425351 2954507 YPTB2893 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071400.1 3424584 D 273123 CDS YP_071401.1 51597210 2956555 complement(3425458..3425913) 1 NC_006155.1 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 3425913 rseC 2956555 rseC Yersinia pseudotuberculosis IP 32953 SoxR reducing system protein RseC YP_071401.1 3425458 R 273123 CDS YP_071402.1 51597211 2956554 complement(3425910..3426866) 1 NC_006155.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 3426866 rseB 2956554 rseB Yersinia pseudotuberculosis IP 32953 periplasmic negative regulator of sigmaE YP_071402.1 3425910 R 273123 CDS YP_071403.1 51597212 2956553 complement(3426866..3427522) 1 NC_006155.1 similar to Yersinia pestis YPO2712 rseA, mclA; sigma E factor negative regulatory protein (100% evalue=1.E-122); Escherichia coli JW2556 rseA; Sigma-E (sigma-24) factor negative regulatory protein (63.3% evalue=2.E-75); anti-RNA polymerase sigma factor SigE 3427522 rseA 2956553 rseA Yersinia pseudotuberculosis IP 32953 anti-RNA polymerase sigma factor SigE YP_071403.1 3426866 R 273123 CDS YP_071404.1 51597213 2956524 complement(3427548..3428123) 1 NC_006155.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 3428123 rpoE 2956524 rpoE Yersinia pseudotuberculosis IP 32953 RNA polymerase sigma factor RpoE YP_071404.1 3427548 R 273123 CDS YP_071405.1 51597214 2956114 3428311..3429948 1 NC_006155.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3429948 nadB 2956114 nadB Yersinia pseudotuberculosis IP 32953 L-aspartate oxidase YP_071405.1 3428311 D 273123 CDS YP_071406.1 51597215 2954508 complement(3430231..3430989) 1 NC_006155.1 similar to Yersinia pestis YPO2709 conserved hypothetical protein (99.6% evalue=1.E-146); Escherichia coli ECs3441 enzyme (53.1% evalue=3.E-67); hypothetical protein 3430989 2954508 YPTB2899 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071406.1 3430231 R 273123 CDS YP_071407.1 51597216 2956633 3431229..3432554 1 NC_006155.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 3432554 srmB 2956633 srmB Yersinia pseudotuberculosis IP 32953 ATP-dependent RNA helicase SrmB YP_071407.1 3431229 D 273123 CDS YP_071408.1 51597217 2957107 complement(3432685..3433341) 1 NC_006155.1 similar to Yersinia pestis YPO2707 yplB; phospholipase A accessory protein (100% evalue=1.E-122); C. elegans B0350.2B unc-44; (CE06703) (31.3% evalue=3.E-07); phospholipase A accessory protein 3433341 yplB 2957107 yplB Yersinia pseudotuberculosis IP 32953 phospholipase A accessory protein YP_071408.1 3432685 R 273123 CDS YP_071409.1 51597218 2957106 complement(3433419..3434381) 1 NC_006155.1 similar to Yersinia pestis YPO2706 yplA, plaA; phospholipase A (100% evalue=1.E-179); phospholipase A 3434381 yplA 2957106 yplA Yersinia pseudotuberculosis IP 32953 phospholipase A YP_071409.1 3433419 R 273123 CDS YP_071410.1 51597219 2954509 complement(3434560..3434943) 1 NC_006155.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 3434943 2954509 YPTB2903 Yersinia pseudotuberculosis IP 32953 autonomous glycyl radical cofactor GrcA YP_071410.1 3434560 R 273123 CDS YP_071411.1 51597220 2956867 3435296..3435982 1 NC_006155.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3435982 ung 2956867 ung Yersinia pseudotuberculosis IP 32953 uracil-DNA glycosylase YP_071411.1 3435296 D 273123 CDS YP_071412.1 51597221 2956219 complement(3436073..3436720) 1 NC_006155.1 catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 3436720 pcp 2956219 pcp Yersinia pseudotuberculosis IP 32953 pyrrolidone-carboxylate peptidase YP_071412.1 3436073 R 273123 CDS YP_071413.1 51597222 2954510 complement(3436730..3437749) 1 NC_006155.1 similar to Yersinia pestis YPO2702 membrane protein (99.7% evalue=0); Ralstonia solanacearum RS01432 probable transmembrane protein (56% evalue=1.E-101); hypothetical protein 3437749 2954510 YPTB2906 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071413.1 3436730 R 273123 CDS YP_071414.1 51597223 2954511 complement(3437746..3438477) 1 NC_006155.1 similar to Yersinia pestis YPO2701 membrane protein (99.5% evalue=1.E-132); Ralstonia solanacearum RS01431 probable transmembrane protein (69.1% evalue=8.E-88); hypothetical protein 3438477 2954511 YPTB2907 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071414.1 3437746 R 273123 CDS YP_071415.1 51597224 2954512 complement(3438562..3439338) 1 NC_006155.1 similar to Yersinia pestis YPO2700 conserved hypothetical protein (99.5% evalue=1.E-136); Escherichia coli JW0703 ybgL; Hypothetical protein (71.3% evalue=3.E-93); LamB/YcsF family protein 3439338 2954512 YPTB2908 Yersinia pseudotuberculosis IP 32953 LamB/YcsF family protein YP_071415.1 3438562 R 273123 CDS YP_071416.1 51597225 2954513 complement(3439296..3440246) 1 NC_006155.1 similar to Yersinia pestis YPO2699 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0702 ybgK; Hypothetical protein (68.9% evalue=1.E-124); hypothetical protein 3440246 2954513 YPTB2909 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071416.1 3439296 R 273123 CDS YP_071417.1 51597226 2954514 complement(3440240..3440896) 1 NC_006155.1 similar to Escherichia coli ECs0736 carboxylase (71.5% evalue=1.E-89); Escherichia coli JW0701 ybgJ, ybgK; Hypothetical protein (72% evalue=6.E-90); carboxylase 3440896 2954514 YPTB2910 Yersinia pseudotuberculosis IP 32953 carboxylase YP_071417.1 3440240 R 273123 CDS YP_071418.1 51597227 2954515 complement(3441515..3442261) 1 NC_006155.1 similar to Yersinia pestis YPO2697 conserved hypothetical protein (99.5% evalue=1.E-141); Escherichia coli ECs0735 hypothetical protein (69.2% evalue=6.E-97); hydrolase-oxidase 3442261 2954515 YPTB2911 Yersinia pseudotuberculosis IP 32953 hydrolase-oxidase YP_071418.1 3441515 R 273123 CDS YP_071419.1 51597228 2954516 complement(3442435..3443472) 1 NC_006155.1 similar to Yersinia pestis YPO2696 3',5'-cyclic-nucleotide phosphodiesterase (99.7% evalue=0); S. pombe CGS2 cgs2, spcc285.09c, pde1; 3',5'-cyclic-nucleotide phosphodiesterase (27.4% evalue=2.E-25); 3',5'-cyclic-nucleotide phosphodiesterase 3443472 2954516 YPTB2912 Yersinia pseudotuberculosis IP 32953 3',5'-cyclic-nucleotide phosphodiesterase YP_071419.1 3442435 R 273123 CDS YP_071420.1 51597229 2956272 complement(3443463..3444926) 1 NC_006155.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 3444926 phrB 2956272 phrB Yersinia pseudotuberculosis IP 32953 deoxyribodipyrimidine photolyase YP_071420.1 3443463 R 273123 CDS YP_071421.1 51597230 2954517 complement(3445056..3445538) 1 NC_006155.1 similar to Yersinia pestis YPO2694 conserved hypothetical protein (100% evalue=7.E-90); Escherichia coli ECs0732 hypothetical protein (54.5% evalue=3.E-41); hypothetical protein 3445538 2954517 YPTB2914 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071421.1 3445056 R 273123 CDS YP_071422.1 51597231 2956965 complement(3445952..3446158) 1 NC_006155.1 similar to Yersinia pestis YPO2693 ybfA; membrane protein (100% evalue=8.E-34); Salmonella typhimurium STM0708 ybfA; periplasmic protein (63.2% evalue=1.E-20); hypothetical protein 3446158 ybfA 2956965 ybfA Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071422.1 3445952 R 273123 CDS YP_071423.1 51597232 2955913 3446653..3448341 1 NC_006155.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3448341 kdpA 2955913 kdpA Yersinia pseudotuberculosis IP 32953 potassium-transporting ATPase subunit A YP_071423.1 3446653 D 273123 CDS YP_071424.1 51597233 2955914 3448435..3450501 1 NC_006155.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 3450501 kdpB 2955914 kdpB Yersinia pseudotuberculosis IP 32953 potassium-transporting ATPase subunit B YP_071424.1 3448435 D 273123 CDS YP_071425.1 51597234 2955915 3450665..3451315 1 NC_006155.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 3451315 kdpC 2955915 kdpC Yersinia pseudotuberculosis IP 32953 potassium-transporting ATPase subunit C YP_071425.1 3450665 D 273123 CDS YP_071426.1 51597235 2955916 3451325..3454051 1 NC_006155.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 3454051 kdpD 2955916 kdpD Yersinia pseudotuberculosis IP 32953 sensor protein KdpD YP_071426.1 3451325 D 273123 CDS YP_071427.1 51597236 2955917 3454592..3455221 1 NC_006155.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 3455221 kdpE 2955917 kdpE Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional activator KdpE YP_071427.1 3454592 D 273123 CDS YP_071428.1 51597237 2954518 3455316..3455744 1 NC_006155.1 similar to Yersinia pestis YPO2687 membrane protein (100% evalue=1.E-70); P. abyssi PAB0665 hypothetical protein (51.7% evalue=9.E-33); BAT family (DMT superfamily) transporter 3455744 2954518 YPTB2921 Yersinia pseudotuberculosis IP 32953 BAT family (DMT superfamily) transporter YP_071428.1 3455316 D 273123 CDS YP_071429.1 51597238 2954519 complement(3455872..3456114) 1 NC_006155.1 hypothetical protein 3456114 2954519 YPTB2922 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071429.1 3455872 R 273123 CDS YP_071430.1 51597239 2956243 complement(3456488..3458173) 1 NC_006155.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3458173 pgm 2956243 pgm Yersinia pseudotuberculosis IP 32953 phosphoglucomutase YP_071430.1 3456488 R 273123 CDS YP_071431.1 51597240 2956593 complement(3458204..3458731) 1 NC_006155.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 3458731 seqA 2956593 seqA Yersinia pseudotuberculosis IP 32953 replication initiation regulator SeqA YP_071431.1 3458204 R 273123 CDS YP_071432.1 51597241 2954520 3459226..3459594 1 NC_006155.1 similar to Yersinia pestis YPO2684 exported protein (99.1% evalue=5.E-63); hypothetical protein 3459594 2954520 YPTB2925 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071432.1 3459226 D 273123 CDS YP_071433.1 51597242 2954521 3459706..3459882 1 NC_006155.1 similar to Yersinia pestis YPO2683 hypothetical protein, 100% identical.; hypothetical protein 3459882 2954521 YPTB2926 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071433.1 3459706 D 273123 CDS YP_071434.1 51597243 2954522 complement(3459889..3460650) 1 NC_006155.1 similar to Yersinia pestis YPO2682 conserved hypothetical protein (100% evalue=1.E-147); Escherichia coli Z2763 ydjC; orf, hypothetical protein (60.7% evalue=7.E-85); hypothetical protein 3460650 2954522 YPTB2927 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071434.1 3459889 R 273123 CDS YP_071435.1 51597244 2955320 complement(3460702..3461532) 1 NC_006155.1 represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR 3461532 celD 2955320 celD Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator ChbR YP_071435.1 3460702 R 273123 CDS YP_071436.1 51597245 2955319 complement(3461581..3461928) 1 NC_006155.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 3461928 celC 2955319 celC Yersinia pseudotuberculosis IP 32953 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA YP_071436.1 3461581 R 273123 CDS YP_071437.1 51597246 2955317 complement(3463468..3463785) 1 NC_006155.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 3463785 celA 2955317 celA Yersinia pseudotuberculosis IP 32953 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB YP_071437.1 3463468 R 273123 CDS YP_071438.1 51597247 2954523 3464825..3465205 1 NC_006155.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3465205 ccrB 2954523 ccrB Yersinia pseudotuberculosis IP 32953 camphor resistance protein CrcB YP_071438.1 3464825 D 273123 CDS YP_071439.1 51597248 2954524 3465221..3465625 1 NC_006155.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3465625 ccrB 2954524 ccrB Yersinia pseudotuberculosis IP 32953 camphor resistance protein CrcB YP_071439.1 3465221 D 273123 CDS YP_071440.1 51597249 2955931 complement(3465723..3466898) 1 NC_006155.1 similar to Yersinia pestis YPO2675 potassium channel protein (98.9% evalue=0); Escherichia coli ECs1750 potassium channel protein (37.8% evalue=2.E-65); voltage-gated potassium channel 3466898 kch 2955931 kch Yersinia pseudotuberculosis IP 32953 voltage-gated potassium channel YP_071440.1 3465723 R 273123 CDS YP_071441.1 51597250 2954525 3467517..3467846 1 NC_006155.1 similar to Yersinia pestis YPO2674 exported protein (100% evalue=1.E-58); Salmonella typhimurium STM1562 periplasmic transport protein (44.4% evalue=2.E-21); acid-resistance protein 3467846 hdeB 2954525 hdeB Yersinia pseudotuberculosis IP 32953 acid-resistance protein YP_071441.1 3467517 D 273123 CDS YP_071442.1 51597251 2954526 complement(3468011..3469069) 1 NC_006155.1 similar to Yersinia pestis YPO2673 nickel transport protein (99.4% evalue=0); Salmonella typhimurium STM2783 nxiA; nickel transporter (60.1% evalue=1.E-119); nickel transport (NiCoT family) protein 3469069 2954526 YPTB2936 Yersinia pseudotuberculosis IP 32953 nickel transport (NiCoT family) protein YP_071442.1 3468011 R 273123 CDS YP_071443.1 51597252 2954527 complement(3469218..3470210) 1 NC_006155.1 similar to Yersinia pestis YPO2672 urea transporter (99% evalue=0); Brucella melitensis BMEI0642 ureA transporter (45.7% evalue=9.E-76); urea transporter 3470210 2954527 YPTB2937 Yersinia pseudotuberculosis IP 32953 urea transporter YP_071443.1 3469218 R 273123 CDS YP_071444.1 51597253 2956873 complement(3470589..3471554) 1 NC_006155.1 similar to Brucella melitensis BMEI0643 urease accessory protein UreD (51.8% evalue=5.E-89); B. halodurans BH0258 ureD; urease accessory protein (29.6% evalue=3.E-14); urease accessory protein 3471554 ureD 2956873 ureD Yersinia pseudotuberculosis IP 32953 urease accessory protein YP_071444.1 3470589 R 273123 CDS YP_071445.1 51597254 2956876 complement(3471551..3472213) 1 NC_006155.1 similar to Yersinia pestis YPO2670 ureG; urease accessory protein (99.5% evalue=1.E-120); Brucella melitensis BMEI0644 urease accessory protein UreG (71.2% evalue=2.E-84); urease accessory protein 3472213 ureG 2956876 ureG Yersinia pseudotuberculosis IP 32953 urease accessory protein YP_071445.1 3471551 R 273123 CDS YP_071446.1 51597255 2956875 complement(3472340..3473026) 1 NC_006155.1 similar to Yersinia pestis YPO2669 ureF; urease accessory protein (99.5% evalue=1.E-126); Brucella melitensis BMEI0645 urease accessory protein UreF (51.3% evalue=8.E-56); urease accessory protein 3473026 ureF 2956875 ureF Yersinia pseudotuberculosis IP 32953 urease accessory protein YP_071446.1 3472340 R 273123 CDS YP_071447.1 51597256 2956874 complement(3473048..3473743) 1 NC_006155.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3473743 ureE 2956874 ureE Yersinia pseudotuberculosis IP 32953 urease accessory protein UreE YP_071447.1 3473048 R 273123 CDS YP_071448.1 51597257 2956872 complement(3474039..3475757) 1 NC_006155.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3475757 ureC 2956872 ureC Yersinia pseudotuberculosis IP 32953 urease subunit alpha YP_071448.1 3474039 R 273123 CDS YP_071449.1 51597258 2956871 complement(3475847..3476281) 1 NC_006155.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); urease subunit beta 3476281 ureB 2956871 ureB Yersinia pseudotuberculosis IP 32953 urease subunit beta YP_071449.1 3475847 R 273123 CDS YP_071450.1 51597259 2956870 complement(3476334..3476636) 1 NC_006155.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3476636 ureA 2956870 ureA Yersinia pseudotuberculosis IP 32953 urease subunit gamma YP_071450.1 3476334 R 273123 CDS YP_071451.1 51597260 2954528 complement(3477835..3478500) 1 NC_006155.1 similar to Yersinia pestis YPO2664 transport ATPase (100% evalue=1.E-126); Salmonella typhimurium STM1259 ATPase component of ABC-type transport system, contain duplicated ATPase domain (61.7% evalue=8.E-66); nickel/di-oligopepetide ABC transporter ATP-binding protein 3478500 2954528 YPTB2945 Yersinia pseudotuberculosis IP 32953 nickel/di-oligopepetide ABC transporter ATP-binding protein YP_071451.1 3477835 R 273123 CDS YP_071452.1 51597261 2954529 complement(3478493..3479299) 1 NC_006155.1 similar to Yersinia pestis YPO2663 transport ATPase (99.6% evalue=1.E-153); Salmonella typhimurium STM1258 ATPase component of ABC-type transport system, contain duplicated ATPase domain (51.3% evalue=1.E-67); nickel/di-oligopepetide ABC transporter ATP-binding protein 3479299 2954529 YPTB2946 Yersinia pseudotuberculosis IP 32953 nickel/di-oligopepetide ABC transporter ATP-binding protein YP_071452.1 3478493 R 273123 CDS YP_071453.1 51597262 2954530 complement(3479299..3480105) 1 NC_006155.1 similar to Yersinia pestis YPO2662 binding-protein-dependent transport protein (100% evalue=1.E-153); Salmonella typhi STY1863 inner membrane transport protein (61.6% evalue=1.E-97); nickel/di-oligopepetide ABC transporter permease 3480105 2954530 YPTB2947 Yersinia pseudotuberculosis IP 32953 nickel/di-oligopepetide ABC transporter permease YP_071453.1 3479299 R 273123 CDS YP_071454.1 51597263 2954531 complement(3480102..3481085) 1 NC_006155.1 similar to Yersinia pestis YPO2661 membrane protein (99.6% evalue=0); Salmonella typhi STY1864 inner membrane transport protein (69.8% evalue=1.E-128); nickel/di-oligopepetide ABC transporter permease 3481085 2954531 YPTB2948 Yersinia pseudotuberculosis IP 32953 nickel/di-oligopepetide ABC transporter permease YP_071454.1 3480102 R 273123 CDS YP_071455.1 51597264 2954532 complement(3481070..3482647) 1 NC_006155.1 similar to Yersinia pestis YPO2660 solute-binding protein (99.6% evalue=0); Salmonella typhimurium STM1255 ABC transporter periplasmic binding protein (72.3% evalue=0); nickel/di-oligopepetide ABC transporter substrate-binding protein 3482647 2954532 YPTB2949 Yersinia pseudotuberculosis IP 32953 nickel/di-oligopepetide ABC transporter substrate-binding protein YP_071455.1 3481070 R 273123 CDS YP_071456.1 51597265 2955369 complement(3483443..3483655) 1 NC_006155.1 similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (91.4% evalue=3.E-32); cold shock protein 3483655 cspB 2955369 cspB Yersinia pseudotuberculosis IP 32953 cold shock protein YP_071456.1 3483443 R 273123 CDS YP_071457.1 51597266 2954533 3484163..3484501 1 NC_006155.1 hypothetical protein 3484501 2954533 YPTB2951 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071457.1 3484163 D 273123 CDS YP_071458.1 51597267 2957074 3484666..3485115 1 NC_006155.1 similar to Yersinia pestis YPO2654 yicN; membrane protein (100% evalue=8.E-81); Salmonella typhi STY3996 yicN; exported protein (35.1% evalue=9.E-21); hypothetical protein 3485115 yicN 2957074 yicN Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071458.1 3484666 D 273123 CDS YP_071459.1 51597268 2954534 complement(3485213..3485548) 1 NC_006155.1 similar to Yersinia pestis YPO2653 conserved hypothetical protein (100% evalue=1.E-59); Salmonella typhi STY2924 ygaC; conserved hypothetical protein (59% evalue=2.E-30); hypothetical protein 3485548 2954534 YPTB2953 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071459.1 3485213 R 273123 CDS YP_071460.1 51597269 2955250 complement(3486027..3486392) 1 NC_006155.1 required for growth and survival under moderately acid conditions; acid shock protein 3486392 asr 2955250 asr Yersinia pseudotuberculosis IP 32953 acid shock protein YP_071460.1 3486027 R 273123 CDS YP_071461.1 51597270 2956160 3486897..3487133 1 NC_006155.1 similar to Yersinia pestis YPO2651 nrdH; glutaredoxin (100% evalue=3.E-40); Agrobacterium tumefaciens AGR_C_102 nrdH; glutaredoxin (61.1% evalue=1.E-23); glutaredoxin 3487133 nrdH 2956160 nrdH Yersinia pseudotuberculosis IP 32953 glutaredoxin YP_071461.1 3486897 D 273123 CDS YP_071462.1 51597271 2956161 3487147..3487551 1 NC_006155.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 3487551 nrdI 2956161 nrdI Yersinia pseudotuberculosis IP 32953 ribonucleotide reductase stimulatory protein YP_071462.1 3487147 D 273123 CDS YP_071463.1 51597272 2956157 3487533..3489683 1 NC_006155.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3489683 nrdE 2956157 nrdE Yersinia pseudotuberculosis IP 32953 ribonucleotide-diphosphate reductase subunit alpha YP_071463.1 3487533 D 273123 CDS YP_071464.1 51597273 2956158 3489790..3490761 1 NC_006155.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 3490761 nrdF 2956158 nrdF Yersinia pseudotuberculosis IP 32953 ribonucleotide-diphosphate reductase subunit beta YP_071464.1 3489790 D 273123 CDS YP_071465.1 51597274 2956327 3491437..3492636 1 NC_006155.1 similar to Yersinia pestis YPO2647 proV; glycine betaine/L-proline transport ATP-binding protein (100% evalue=0); Escherichia coli JW2652 proV; Glycine betaine/l-proline transport ATP-binding protein ProV (81.6% evalue=0); glycine/betaine/L-proline ABC transporter ATP-binding protein proV 3492636 proV 2956327 proV Yersinia pseudotuberculosis IP 32953 glycine/betaine/L-proline ABC transporter ATP-binding protein proV YP_071465.1 3491437 D 273123 CDS YP_071466.1 51597275 2956328 3492629..3493795 1 NC_006155.1 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 3493795 proW 2956328 proW Yersinia pseudotuberculosis IP 32953 glycine betaine transporter membrane protein YP_071466.1 3492629 D 273123 CDS YP_071467.1 51597276 2956329 3493843..3494847 1 NC_006155.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 3494847 proX 2956329 proX Yersinia pseudotuberculosis IP 32953 glycine betaine transporter periplasmic subunit YP_071467.1 3493843 D 273123 CDS YP_071468.1 51597277 2954535 complement(3495077..3496027) 1 NC_006155.1 similar to Ralstonia solanacearum RS01484 conserved hypothetical protein (66.5% evalue=1.E-130); Pseudomonas aeruginosa PA1517 conserved hypothetical protein (58.9% evalue=1.E-110); hypothetical protein 3496027 2954535 YPTB2962 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071468.1 3495077 R 273123 CDS YP_071469.1 51597278 2954536 3496321..3497832 1 NC_006155.1 similar to Yersinia pestis YPO1083 permease (99.7% evalue=0); Pseudomonas aeruginosa PA0476 probable permease (38.5% evalue=1.E-100); nucleobase:cation symporter 3497832 2954536 YPTB2963 Yersinia pseudotuberculosis IP 32953 nucleobase:cation symporter YP_071469.1 3496321 D 273123 CDS YP_071470.1 51597279 2955477 complement(3498078..3498842) 1 NC_006155.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3498842 dnaQ 2955477 dnaQ Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit epsilon YP_071470.1 3498078 R 273123 CDS YP_071471.1 51597280 2956470 3498912..3499376 1 NC_006155.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 3499376 rnhA 2956470 rnhA Yersinia pseudotuberculosis IP 32953 ribonuclease H YP_071471.1 3498912 D 273123 CDS YP_071472.1 51597281 2954537 complement(3499431..3500150) 1 NC_006155.1 similar to Yersinia pestis YPO1080 conserved hypothetical protein (100% evalue=1.E-141); Salmonella typhimurium STM0262 yafS; SAM-dependent methyltransferase (65.2% evalue=8.E-91); hypothetical protein 3500150 2954537 YPTB2966 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071472.1 3499431 R 273123 CDS YP_071473.1 51597282 2955705 3500195..3500950 1 NC_006155.1 similar to Yersinia pestis YPO1079 gloB; hydroxyacylglutathione hydrolase (99.6% evalue=1.E-145); Salmonella typhimurium STM0261 gloB; hydroxyacylglutathione hydrolase (58.9% evalue=8.E-86); hydroxyacylglutathione hydrolase 3500950 gloB 2955705 gloB Yersinia pseudotuberculosis IP 32953 hydroxyacylglutathione hydrolase YP_071473.1 3500195 D 273123 CDS YP_071474.1 51597283 2956052 3500983..3502410 1 NC_006155.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 3502410 mltD 2956052 mltD Yersinia pseudotuberculosis IP 32953 membrane-bound lytic murein transglycosylase D YP_071474.1 3500983 D 273123 CDS YP_071475.1 51597284 2954538 complement(3502453..3503214) 1 NC_006155.1 similar to Yersinia pestis YPO1077 conserved hypothetical protein (100% evalue=1.E-144); Escherichia coli ECs0205 hypothetical protein (75.1% evalue=1.E-107); hypothetical protein 3503214 2954538 YPTB2969 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071475.1 3502453 R 273123 CDS YP_071476.1 51597285 2954539 complement(3503596..3504060) 1 NC_006155.1 similar to Yersinia pestis YPO1076 hypothetical protein, 100% identical; hypothetical protein 3504060 2954539 YPTB2970 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071476.1 3503596 R 273123 CDS YP_071477.1 51597286 2954540 complement(3504095..3504898) 1 NC_006155.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B 3504898 dkgB 2954540 dkgB Yersinia pseudotuberculosis IP 32953 2,5-diketo-D-gluconate reductase B YP_071477.1 3504095 R 273123 CDS YP_071478.1 51597287 2954541 complement(3511130..3511696) 1 NC_006155.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 3511696 2954541 YPTB2972 Yersinia pseudotuberculosis IP 32953 D,D-heptose 1,7-bisphosphate phosphatase YP_071478.1 3511130 R 273123 CDS YP_071479.1 51597288 2954542 3511883..3512914 1 NC_006155.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3512914 metN 2954542 metN Yersinia pseudotuberculosis IP 32953 DL-methionine transporter ATP-binding subunit YP_071479.1 3511883 D 273123 CDS YP_071480.1 51597289 2954543 3512907..3513560 1 NC_006155.1 part of the MetNIQ methionine uptake system; DL-methionine transporter permease 3513560 2954543 YPTB2974 Yersinia pseudotuberculosis IP 32953 DL-methionine transporter permease YP_071480.1 3512907 D 273123 CDS YP_071481.1 51597290 2954544 3513624..3514439 1 NC_006155.1 similar to Yersinia pestis YPO1071 lipoprotein (99.2% evalue=1.E-149); Escherichia coli b0197 yaeC; unknown ABC transport system substrate-binding protein (90.4% evalue=1.E-138); DL-methionine transporter substrate-binding subunit 3514439 metQ 2954544 metQ Yersinia pseudotuberculosis IP 32953 DL-methionine transporter substrate-binding subunit YP_071481.1 3513624 D 273123 CDS YP_071482.1 51597291 2956409 3514557..3514964 1 NC_006155.1 similar to Yersinia pestis YPO1070 rcsF; lipoprotein (100% evalue=1.E-73); Salmonella typhimurium STM0244 rcsF; regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis (67.4% evalue=9.E-46); outer membrane lipoprotein 3514964 rcsF 2956409 rcsF Yersinia pseudotuberculosis IP 32953 outer membrane lipoprotein YP_071482.1 3514557 D 273123 CDS YP_071483.1 51597292 2954545 3514961..3515668 1 NC_006155.1 similar to Yersinia pestis YPO1069 conserved hypothetical protein (100% evalue=1.E-135); Salmonella typhimurium STM0243 yaeB; paral regulator (70.2% evalue=7.E-94); hypothetical protein 3515668 2954545 YPTB2977 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071483.1 3514961 D 273123 CDS YP_071484.1 51597293 2956326 3515772..3517490 1 NC_006155.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3517490 proS 2956326 proS Yersinia pseudotuberculosis IP 32953 prolyl-tRNA synthetase YP_071484.1 3515772 D 273123 CDS YP_071485.1 51597294 2955381 complement(3517624..3518307) 1 NC_006155.1 similar to Yersinia pestis YPO1067 cutF, nlpE; copper homeostasis lipoprotein (100% evalue=1.E-130); Escherichia coli ECs0194 copper homeostasis protein (49.1% evalue=2.E-59); copper homeostasis and adhesion lipoprotein 3518307 cutF 2955381 cutF Yersinia pseudotuberculosis IP 32953 copper homeostasis and adhesion lipoprotein YP_071485.1 3517624 R 273123 CDS YP_071486.1 51597295 2954546 complement(3518392..3518832) 1 NC_006155.1 similar to Yersinia pestis YPO1066 conserved hypothetical protein (99.2% evalue=2.E-69); Escherichia coli b0191 yaeJ; hypothetical 15.6 kD protein in mesJ-cutF intergenic region (ORF140) (65.1% evalue=3.E-47); peptidyl-tRNA hydrolase domain-containing protein 3518832 2954546 YPTB2980 Yersinia pseudotuberculosis IP 32953 peptidyl-tRNA hydrolase domain-containing protein YP_071486.1 3518392 R 273123 CDS YP_071487.1 51597296 2954547 complement(3518811..3519425) 1 NC_006155.1 similar to Yersinia pestis YPO1065 conserved hypothetical protein (100% evalue=1.E-103); Escherichia coli b0190 yaeQ; hypothetical 20.9 kD protein in mesJ-cutF intergenic region (61.7% evalue=3.E-64); hypothetical protein 3519425 2954547 YPTB2981 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071487.1 3518811 R 273123 CDS YP_071488.1 51597297 2954548 3519601..3519801 1 NC_006155.1 similar to Yersinia pestis YPO1064a conserved hypothetical protein (98.4% evalue=6.E-31); Salmonella typhimurium STM0238 yaeP; cytoplasmic protein (78.7% evalue=8.E-23); hypothetical protein 3519801 2954548 YPTB2982 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071488.1 3519601 D 273123 CDS YP_071489.1 51597298 2954549 3519788..3520048 1 NC_006155.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 3520048 2954549 YPTB2983 Yersinia pseudotuberculosis IP 32953 Rho-binding antiterminator YP_071489.1 3519788 D 273123 CDS YP_071490.1 51597299 2954550 complement(3520302..3520619) 1 NC_006155.1 similar to Yersinia pestis YPO1063 cytochrome (100% evalue=1.E-54); Vibrio cholerae VC2241 cytochrome c554 (50.4% evalue=7.E-21); cytochrome 3520619 2954550 YPTB2984 Yersinia pseudotuberculosis IP 32953 cytochrome YP_071490.1 3520302 R 273123 CDS YP_071491.1 51597300 2954551 complement(3520856..3522238) 1 NC_006155.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 3522238 tilS 2954551 tilS Yersinia pseudotuberculosis IP 32953 tRNA(Ile)-lysidine synthetase YP_071491.1 3520856 R 273123 CDS YP_071492.1 51597301 2954552 complement(3522240..3522638) 1 NC_006155.1 similar to Yersinia pestis YPO1061 conserved hypothetical protein (99.2% evalue=5.E-73); Escherichia coli ECs0189 hypothetical protein (71.8% evalue=4.E-51); hypothetical protein 3522638 2954552 YPTB2986 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071492.1 3522240 R 273123 CDS YP_071493.1 51597302 2955155 complement(3522822..3523781) 1 NC_006155.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3523781 accA 2955155 accA Yersinia pseudotuberculosis IP 32953 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_071493.1 3522822 R 273123 CDS YP_071494.1 51597303 2955472 complement(3523794..3527309) 1 NC_006155.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3527309 dnaE 2955472 dnaE Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit alpha YP_071494.1 3523794 R 273123 CDS YP_071495.1 51597304 2956471 complement(3527439..3528035) 1 NC_006155.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3528035 rnhB 2956471 rnhB Yersinia pseudotuberculosis IP 32953 ribonuclease HII YP_071495.1 3527439 R 273123 CDS YP_071496.1 51597305 2955967 complement(3528032..3529216) 1 NC_006155.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3529216 lpxB 2955967 lpxB Yersinia pseudotuberculosis IP 32953 lipid-A-disaccharide synthase YP_071496.1 3528032 R 273123 CDS YP_071497.1 51597306 2955966 complement(3529220..3530008) 1 NC_006155.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3530008 lpxA 2955966 lpxA Yersinia pseudotuberculosis IP 32953 UDP-N-acetylglucosamine acyltransferase YP_071497.1 3529220 R 273123 CDS YP_071498.1 51597307 2955520 complement(3530012..3530542) 1 NC_006155.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3530542 fabZ 2955520 fabZ Yersinia pseudotuberculosis IP 32953 (3R)-hydroxymyristoyl-ACP dehydratase YP_071498.1 3530012 R 273123 CDS YP_071499.1 51597308 2955969 complement(3530700..3531722) 1 NC_006155.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3531722 lpxD 2955969 lpxD Yersinia pseudotuberculosis IP 32953 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_071499.1 3530700 R 273123 CDS YP_071500.1 51597309 2956190 complement(3531726..3532274) 1 NC_006155.1 similar to Yersinia pestis YPO1053 ompH; cationic 19 kDa outer membrane protein precursor (99.3% evalue=9.E-85); Escherichia coli JW0173 hlpA; Histone-like protein hlp-1 precursor (DNA-binding 17 kd protein) (67.6% evalue=1.E-49); periplasmic chaperone 3532274 ompH 2956190 ompH Yersinia pseudotuberculosis IP 32953 periplasmic chaperone YP_071500.1 3531726 R 273123 CDS YP_071501.1 51597310 2954553 complement(3532381..3534768) 1 NC_006155.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT 3534768 2954553 YPTB2995 Yersinia pseudotuberculosis IP 32953 outer membrane protein assembly factor YaeT YP_071501.1 3532381 R 273123 CDS YP_071502.1 51597311 2954554 complement(3534805..3536160) 1 NC_006155.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 3536160 2954554 YPTB2996 Yersinia pseudotuberculosis IP 32953 zinc metallopeptidase RseP YP_071502.1 3534805 R 273123 CDS YP_071503.1 51597312 2955316 complement(3536189..3537037) 1 NC_006155.1 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase 3537037 cdsA 2955316 cdsA Yersinia pseudotuberculosis IP 32953 CDP-diglyceride synthase YP_071503.1 3536189 R 273123 CDS YP_071504.1 51597313 2956869 complement(3537047..3537805) 1 NC_006155.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 3537805 uppS 2956869 uppS Yersinia pseudotuberculosis IP 32953 undecaprenyl pyrophosphate synthase YP_071504.1 3537047 R 273123 CDS YP_071505.1 51597314 2955491 complement(3538029..3539225) 1 NC_006155.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3539225 dxr 2955491 dxr Yersinia pseudotuberculosis IP 32953 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_071505.1 3538029 R 273123 CDS YP_071506.1 51597315 2955642 complement(3539439..3539996) 1 NC_006155.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3539996 frr 2955642 frr Yersinia pseudotuberculosis IP 32953 ribosome recycling factor YP_071506.1 3539439 R 273123 CDS YP_071507.1 51597316 2956390 complement(3540132..3540857) 1 NC_006155.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3540857 pyrH 2956390 pyrH Yersinia pseudotuberculosis IP 32953 uridylate kinase YP_071507.1 3540132 R 273123 CDS YP_071508.1 51597317 2956839 complement(3541066..3541923) 1 NC_006155.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3541923 tsf 2956839 tsf Yersinia pseudotuberculosis IP 32953 elongation factor Ts YP_071508.1 3541066 R 273123 CDS YP_071509.1 51597318 2956531 complement(3542052..3542777) 1 NC_006155.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3542777 rpsB 2956531 rpsB Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S2 YP_071509.1 3542052 R 273123 CDS YP_071510.1 51597319 2955193 3543212..3544003 1 NC_006155.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3544003 ampM 2955193 ampM Yersinia pseudotuberculosis IP 32953 methionine aminopeptidase YP_071510.1 3543212 D 273123 CDS YP_071511.1 51597320 2955697 3544063..3546744 1 NC_006155.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3546744 glnD 2955697 glnD Yersinia pseudotuberculosis IP 32953 PII uridylyl-transferase YP_071511.1 3544063 D 273123 CDS YP_071512.1 51597321 2955428 3546919..3547743 1 NC_006155.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3547743 dapD 2955428 dapD Yersinia pseudotuberculosis IP 32953 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_071512.1 3546919 D 273123 CDS YP_071513.1 51597322 2954555 3547867..3548256 1 NC_006155.1 similar to Yersinia pestis YPO1040 conserved hypothetical protein (100% evalue=2.E-69); Escherichia coli Z0175 yaeH; structural protein (85.7% evalue=3.E-59); hypothetical protein 3548256 2954555 YPTB3007 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071513.1 3547867 D 273123 CDS YP_071514.1 51597323 2954556 complement(3548346..3548795) 1 NC_006155.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 3548795 2954556 YPTB3008 Yersinia pseudotuberculosis IP 32953 flavodoxin YP_071514.1 3548346 R 273123 CDS YP_071515.1 51597324 2954557 complement(3548823..3549596) 1 NC_006155.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 3549596 2954557 YPTB3009 Yersinia pseudotuberculosis IP 32953 tRNA pseudouridine synthase C YP_071515.1 3548823 R 273123 CDS YP_071516.1 51597325 2954558 complement(3549596..3549928) 1 NC_006155.1 similar to Yersinia pestis YPO1037 conserved hypothetical protein (100% evalue=7.E-60); H. influenzae HI1436 hypothetical prltein HI1436 (50.9% evalue=2.E-24); hypothetical protein 3549928 2954558 YPTB3010 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071516.1 3549596 R 273123 CDS YP_071517.1 51597326 2956655 complement(3550620..3551171) 1 NC_006155.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 3551171 syd 2956655 syd Yersinia pseudotuberculosis IP 32953 SecY interacting protein Syd YP_071517.1 3550620 R 273123 CDS YP_071518.1 51597327 2954559 3551303..3552148 1 NC_006155.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3552148 queF 2954559 queF Yersinia pseudotuberculosis IP 32953 7-cyano-7-deazaguanine reductase YP_071518.1 3551303 D 273123 CDS YP_071519.1 51597328 2954560 3552301..3553665 1 NC_006155.1 similar to Yersinia pestis YPO1033 conserved hypothetical protein (99.5% evalue=0); Salmonella typhimurium STM2969 ygdH; nucleotide binding (83.9% evalue=0); hypothetical protein 3553665 2954560 YPTB3013 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071519.1 3552301 D 273123 CDS YP_071520.1 51597329 2956908 3553925..3554680 1 NC_006155.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 3554680 xni 2956908 xni Yersinia pseudotuberculosis IP 32953 exonuclease IX YP_071520.1 3553925 D 273123 CDS YP_071521.1 51597330 2954561 complement(3554745..3555851) 1 NC_006155.1 similar to Yersinia pestis YPO1031 conserved hypothetical protein (100% evalue=0); Escherichia coli b2806 ygdE; hypothetical 41.9 kD protein in fucR-gcvA intergenic region (ORF3) (78% evalue=1.E-170); RNA 2'-O-ribose methyltransferase 3555851 2954561 YPTB3015 Yersinia pseudotuberculosis IP 32953 RNA 2'-O-ribose methyltransferase YP_071521.1 3554745 R 273123 CDS YP_071522.1 51597331 2954562 complement(3555844..3556239) 1 NC_006155.1 similar to Yersinia pestis YPO1030 conserved hypothetical protein (100% evalue=2.E-71); Escherichia coli b2807 ygdD; hypothetical 14.3 kD protein in fucR-gcvA intergenic region (ORF2) (71.7% evalue=8.E-53); hypothetical protein 3556239 2954562 YPTB3016 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071522.1 3555844 R 273123 CDS YP_071523.1 51597332 2955679 complement(3556405..3557322) 1 NC_006155.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 3557322 gcvA 2955679 gcvA Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional activator GcvA YP_071523.1 3556405 R 273123 CDS YP_071524.1 51597333 2954563 3557929..3559248 1 NC_006155.1 similar to Yersinia pestis YPO1028 aminotransferase class V (99.7% evalue=0); Escherichia coli b2810 cysteine sulfinate desulfinase (66.8% evalue=1.E-155); cysteine sulfinate desulfinase 3559248 2954563 YPTB3018 Yersinia pseudotuberculosis IP 32953 cysteine sulfinate desulfinase YP_071524.1 3557929 D 273123 CDS YP_071525.1 51597334 2954564 3559383..3559826 1 NC_006155.1 similar to Yersinia pestis YPO1027 conserved hypothetical protein (100% evalue=3.E-81); Escherichia coli b2811 ygdK; hypothetical 15.9 kD protein in gcvA-metZ intergenic region (O147) (58.9% evalue=7.E-40); hypothetical protein 3559826 2954564 YPTB3019 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071525.1 3559383 D 273123 CDS YP_071526.1 51597335 2954565 complement(3559862..3560689) 1 NC_006155.1 similar to Yersinia pestis YPO1026 conserved hypothetical protein (100% evalue=1.E-154); Escherichia coli b2812 ygdL; hypothetical 28.6 kD protein in gcvA-mltA intergenic region (80.5% evalue=1.E-124); hypothetical protein 3560689 2954565 YPTB3020 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071526.1 3559862 R 273123 CDS YP_071527.1 51597336 2954566 complement(3560832..3562004) 1 NC_006155.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 3562004 mltA 2954566 mltA Yersinia pseudotuberculosis IP 32953 murein transglycosylase A YP_071527.1 3560832 R 273123 CDS YP_071528.1 51597337 2954567 complement(3562907..3564157) 1 NC_006155.1 similar to Yersinia pestis YPO1023 N-acetylmuramoyl-L-alanine amidase AmiC precursor (100% evalue=0); Salmonella typhi STY3129 N-acetylmuramoyl-L-alanine amidase (72.3% evalue=1.E-171); N-acetylmuramoyl-L-alanine amidase 3564157 2954567 YPTB3022 Yersinia pseudotuberculosis IP 32953 N-acetylmuramoyl-L-alanine amidase YP_071528.1 3562907 R 273123 CDS YP_071529.1 51597338 2955212 3564393..3565718 1 NC_006155.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 3565718 argA 2955212 argA Yersinia pseudotuberculosis IP 32953 N-acetylglutamate synthase YP_071529.1 3564393 D 273123 CDS YP_071530.1 51597339 2956415 complement(3565860..3567818) 1 NC_006155.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha 3567818 recD 2956415 recD Yersinia pseudotuberculosis IP 32953 exonuclease V subunit alpha YP_071530.1 3565860 R 273123 CDS YP_071531.1 51597340 2956413 complement(3567815..3571477) 1 NC_006155.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta 3571477 recB 2956413 recB Yersinia pseudotuberculosis IP 32953 exonuclease V subunit beta YP_071531.1 3567815 R 273123 CDS YP_071532.1 51597341 2956358 complement(3571474..3574362) 1 NC_006155.1 similar to Yersinia pestis YPO1019 ptrA, ptr; protease III precursor (100% evalue=0); Salmonella typhimurium STM2995 ptr; protease III (63.3% evalue=0); protease III 3574362 ptrA 2956358 ptrA Yersinia pseudotuberculosis IP 32953 protease III YP_071532.1 3571474 R 273123 CDS YP_071533.1 51597342 2956414 complement(3574444..3577815) 1 NC_006155.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma 3577815 recC 2956414 recC Yersinia pseudotuberculosis IP 32953 exonuclease V subunit gamma YP_071533.1 3574444 R 273123 CDS YP_071534.1 51597343 2954568 complement(3577950..3578315) 1 NC_006155.1 similar to Yersinia pestis YPO1017 prepilin peptidase dependent protein (100% evalue=2.E-68); prepilin peptidase dependent protein 3578315 2954568 YPTB3028 Yersinia pseudotuberculosis IP 32953 prepilin peptidase dependent protein YP_071534.1 3577950 R 273123 CDS YP_071535.1 51597344 2954569 complement(3578348..3578818) 1 NC_006155.1 similar to Yersinia pestis YPO1016 membrane protein (100% evalue=5.E-89); hypothetical protein 3578818 2954569 YPTB3029 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071535.1 3578348 R 273123 CDS YP_071536.1 51597345 2954570 complement(3578815..3579423) 1 NC_006155.1 similar to Yersinia pestis YPO1015 prepilin peptidase dependent protein (100% evalue=1.E-116); Salmonella typhi STY3137 ppdB; prepilin peptidase dependent protein B precursor (35.1% evalue=7.E-25); hypothetical protein 3579423 2954570 YPTB3030 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071536.1 3578815 R 273123 CDS YP_071537.1 51597346 2954571 complement(3579414..3579983) 1 NC_006155.1 similar to Yersinia pestis YPO1014a prepilin peptidase (partial) (100% evalue=6.E-26); Salmonella typhimurium STM3000 ppdA; prepilin peptidase dependent protein A, component in type IV pilin biogenesis (35% evalue=5.E-20); hypothetical protein 3579983 2954571 YPTB3031 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071537.1 3579414 R 273123 CDS YP_071538.1 51597347 2954572 complement(3580106..3580204) 1 NC_006155.1 hypothetical protein 3580204 2954572 YPTB3032 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071538.1 3580106 R 273123 CDS YP_071539.1 51597348 2956705 complement(3580235..3581029) 1 NC_006155.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 3581029 thyA 2956705 thyA Yersinia pseudotuberculosis IP 32953 thymidylate synthase YP_071539.1 3580235 R 273123 CDS YP_071540.1 51597349 2955946 complement(3581036..3581908) 1 NC_006155.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3581908 lgt 2955946 lgt Yersinia pseudotuberculosis IP 32953 prolipoprotein diacylglyceryl transferase YP_071540.1 3581036 R 273123 CDS YP_071541.1 51597350 2956365 complement(3582159..3584405) 1 NC_006155.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 3584405 ptsP 2956365 ptsP Yersinia pseudotuberculosis IP 32953 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein YP_071541.1 3582159 R 273123 CDS YP_071542.1 51597351 2954573 complement(3584418..3584945) 1 NC_006155.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3584945 2954573 YPTB3036 Yersinia pseudotuberculosis IP 32953 dinucleoside polyphosphate hydrolase YP_071542.1 3584418 R 273123 CDS YP_071543.1 51597352 2956106 3585642..3586328 1 NC_006155.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3586328 mutH 2956106 mutH Yersinia pseudotuberculosis IP 32953 DNA mismatch repair protein YP_071543.1 3585642 D 273123 CDS YP_071544.1 51597353 2956661 3586699..3587739 1 NC_006155.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo/keto reductase 3587739 tas 2956661 tas Yersinia pseudotuberculosis IP 32953 aldo/keto reductase YP_071544.1 3586699 D 273123 CDS YP_071545.1 51597354 2954574 complement(3588116..3588541) 1 NC_006155.1 similar to Yersinia pestis YPO0791 hypothetical protein, 100% identical; hypothetical protein 3588541 2954574 YPTB3039 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071545.1 3588116 R 273123 CDS YP_071546.1 51597355 2957049 complement(3588708..3589928) 1 NC_006155.1 similar to Yersinia pestis YPO0792 ygeD; membrane protein (100% evalue=0); Salmonella typhimurium STM3009 ygeD; efflux protein, resistance protein (76% evalue=1.E-173); lysophospholipid transporter LplT 3589928 ygeD 2957049 ygeD Yersinia pseudotuberculosis IP 32953 lysophospholipid transporter LplT YP_071546.1 3588708 R 273123 CDS YP_071547.1 51597356 2955152 complement(3589925..3592081) 1 NC_006155.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 3592081 aas 2955152 aas Yersinia pseudotuberculosis IP 32953 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_071547.1 3589925 R 273123 CDS YP_071548.1 51597357 2955294 complement(3592530..3594791) 1 NC_006155.1 similar to Yersinia pestis YPO0794 bisC; biotin sulfoxide reductas2 (99.6% evalue=0); Mycobacterium tuberculosis Rv1442 bisC; biotin sulfoxide reductase (42.4% evalue=1.E-174); biotin sulfoxide reductase 3594791 bisC 2955294 bisC Yersinia pseudotuberculosis IP 32953 biotin sulfoxide reductase YP_071548.1 3592530 R 273123 CDS YP_071549.1 51597358 2955673 3595101..3596123 1 NC_006155.1 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 3596123 galR 2955673 galR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator GalR YP_071549.1 3595101 D 273123 CDS YP_071550.1 51597359 2955976 complement(3596120..3597382) 1 NC_006155.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 3597382 lysA 2955976 lysA Yersinia pseudotuberculosis IP 32953 diaminopimelate decarboxylase YP_071550.1 3596120 R 273123 CDS YP_071551.1 51597360 2955979 3597598..3598539 1 NC_006155.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 3598539 lysR 2955979 lysR Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071551.1 3597598 D 273123 CDS YP_071552.1 51597361 2954576 complement(3598536..3599696) 1 NC_006155.1 similar to Yersinia pestis YPO0798 sugar transport protein (100% evalue=0); Pseudomonas aeruginosa PA4355 probable MFS transporter (70.2% evalue=1.E-148); MFS family sugar antiporter 3599696 2954576 YPTB3047 Yersinia pseudotuberculosis IP 32953 MFS family sugar antiporter YP_071552.1 3598536 R 273123 CDS YP_071553.1 51597362 2954577 complement(3600081..3600989) 1 NC_006155.1 similar to Yersinia pestis YPO0799 LysR-family transcriptional regulatory protein (99.6% evalue=1.E-168); Pseudomonas aeruginosa PA0056 probable transcriptional regulator (58.2% evalue=5.E-95); LysR family transcriptional regulator 3600989 2954577 YPTB3048 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071553.1 3600081 R 273123 CDS YP_071554.1 51597363 2954578 3601096..3601983 1 NC_006155.1 similar to Yersinia pestis YPO0800 exported protein (100% evalue=1.E-165); Pseudomonas aeruginosa PA0057 hypothetical protein (57.9% evalue=2.E-96); hypothetical protein 3601983 2954578 YPTB3049 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071554.1 3601096 D 273123 CDS YP_071555.1 51597364 2954579 3602096..3602731 1 NC_006155.1 similar to Yersinia pestis YPO0801 conserved hypothetical protein (99.5% evalue=1.E-121); Ralstonia solanacearum RS03863 conserved hypothetical protein (59% evalue=5.E-67); hypothetical protein 3602731 2954579 YPTB3050 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071555.1 3602096 D 273123 CDS YP_071556.1 51597365 2955326 complement(3602717..3604360) 1 NC_006155.1 similar to Yersinia pestis YPO0802 cheD, tse; methyl-accepting chemotaxis protein (99.6% evalue=0); Escherichia coli b4355 tsr, cheD; methyl-accepting chemotaxis protein I (MCP-I) (serine chemoreceptor protein) (40.1% evalue=1.E-101); methyl-accepting chemotaxis protein 3604360 cheD 2955326 cheD Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein YP_071556.1 3602717 R 273123 CDS YP_071557.1 51597366 2954580 complement(3604563..3605036) 1 NC_006155.1 similar to Yersinia pestis YPO0803 hypothetical protein (98.4% evalue=7.E-73); hypothetical protein 3605036 2954580 YPTB3052 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071557.1 3604563 R 273123 CDS YP_071558.1 51597367 2954581 complement(3605021..3605680) 1 NC_006155.1 similar to Yersinia pestis YPO0804 regulatory membrane protein (100% evalue=1.E-112); Vibrio cholerae VC0826 toxin co-regulated pilus biosynthesis protein P (36.3% evalue=1.E-08); regulatory membrane protein 3605680 2954581 YPTB3053 Yersinia pseudotuberculosis IP 32953 regulatory membrane protein YP_071558.1 3605021 R 273123 CDS YP_071559.1 51597368 2954582 3605964..3606329 1 NC_006155.1 similar to Yersinia pestis YPO0805 lipoprotein; hypothetical protein 3606329 2954582 YPTB3054 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071559.1 3605964 D 273123 CDS YP_071560.1 51597369 2954583 complement(3606313..3607155) 1 NC_006155.1 deleted EC_number 3.4.99.-; similar to Yersinia pestis YPO0806 prepilin peptidase (99.6% evalue=1.E-160); Ralstonia solanacearum RS00278 pilD, RSc2827; probable type 4 prepilin peptidase bifunctionnal: leader peptidase and N-methyltransferase transmembrane protein (44% evalue=1.E-53); prepilin peptidase 3607155 2954583 YPTB3055 Yersinia pseudotuberculosis IP 32953 prepilin peptidase YP_071560.1 3606313 R 273123 CDS YP_071561.1 51597370 2954584 complement(3607181..3607642) 1 NC_006155.1 similar to Yersinia pestis YPO0807 membrane protein, 100% identical; hypothetical protein 3607642 2954584 YPTB3056 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071561.1 3607181 R 273123 CDS YP_071562.1 51597371 2955760 complement(3607639..3608829) 1 NC_006155.1 similar to Yersinia pestis YPO0808 general secretion pathway protein L (99.7% evalue=0); Vibrio cholerae VC2725 general secretion pathway protein L (19.5% evalue=4.E-09); general secretion pathway protein L 3608829 gspL 2955760 gspL Yersinia pseudotuberculosis IP 32953 general secretion pathway protein L YP_071562.1 3607639 R 273123 CDS YP_071563.1 51597372 2955759 complement(3608813..3609769) 1 NC_006155.1 similar to Yersinia pestis YPO0809 general secretion pathway protein K (93.3% evalue=1.E-170); general secretion pathway protein K 3609769 gspK 2955759 gspK Yersinia pseudotuberculosis IP 32953 general secretion pathway protein K YP_071563.1 3608813 R 273123 CDS YP_071564.1 51597373 2955758 complement(3609778..3610374) 1 NC_006155.1 similar to Yersinia pestis YPO0810 general secretion pathway protein J (91.4% evalue=1.E-101); Vibrio cholerae VC2727 general secretion pathway protein J (27.7% evalue=6.E-16); general secretion pathway protein J 3610374 gspJ 2955758 gspJ Yersinia pseudotuberculosis IP 32953 general secretion pathway protein J YP_071564.1 3609778 R 273123 CDS YP_071565.1 51597374 2955757 complement(3610367..3610711) 1 NC_006155.1 similar to Yersinia pestis YPO0811 general secretion pathway protein I (92.1% evalue=5.E-56); Vibrio cholerae VC2728 general secretion pathway protein I (31.9% evalue=6.E-11); general secretion pathway protein I 3610711 gspI 2955757 gspI Yersinia pseudotuberculosis IP 32953 general secretion pathway protein I YP_071565.1 3610367 R 273123 CDS YP_071566.1 51597375 2954585 complement(3610749..3611291) 1 NC_006155.1 similar to Yersinia pestis YPO0812 general secretion pathway protein H (98.8% evalue=1.E-101); general secretion pathway protein H 3611291 2954585 YPTB3061 Yersinia pseudotuberculosis IP 32953 general secretion pathway protein H YP_071566.1 3610749 R 273123 CDS YP_071567.1 51597376 2955756 complement(3611296..3611733) 1 NC_006155.1 similar to Yersinia pestis YPO0813 general secretion pathway protein G (100% evalue=4.E-80); Escherichia coli b3328 hofG, hopG; general secretion pathway protein G precursor (protein transport protein hofG) (63.9% evalue=2.E-46); general secretion pathway protein G 3611733 gspG 2955756 gspG Yersinia pseudotuberculosis IP 32953 general secretion pathway protein G YP_071567.1 3611296 R 273123 CDS YP_071568.1 51597377 2955755 complement(3611753..3612955) 1 NC_006155.1 similar to Escherichia coli b3327 hofF, hopF; general secretion pathway protein F (protein transport protein hofF) (38.8% evalue=5.E-76); Escherichia coli JW3289 hofF (38.8% evalue=5.E-76); general secretion pathway protein F 3612955 gspF 2955755 gspF Yersinia pseudotuberculosis IP 32953 general secretion pathway protein F YP_071568.1 3611753 R 273123 CDS YP_071569.1 51597378 2955754 complement(3612942..3614453) 1 NC_006155.1 similar to Yersinia pestis YPO0815 general secretion pathway protein E (100% evalue=0); Vibrio cholerae VC2732 general secretion pathway protein E (56.7% evalue=1.E-142); general secretion pathway protein E 3614453 gspE 2955754 gspE Yersinia pseudotuberculosis IP 32953 general secretion pathway protein E YP_071569.1 3612942 R 273123 CDS YP_071570.1 51597379 2955753 complement(3614450..3616372) 1 NC_006155.1 similar to Yersinia pestis YPO0816 general secretion pathway protein D (99.6% evalue=0); Escherichia coli b3325 yheF; general secretion pathway protein D precursor (44.8% evalue=1.E-146); general secretion pathway protein D 3616372 gspD 2955753 gspD Yersinia pseudotuberculosis IP 32953 general secretion pathway protein D YP_071570.1 3614450 R 273123 CDS YP_071571.1 51597380 2954586 complement(3616453..3616986) 1 NC_006155.1 similar to Yersinia pestis YPO0817 general secretion pathway protein C (98.8% evalue=4.E-90); general secretion pathway protein C 3616986 2954586 YPTB3066 Yersinia pseudotuberculosis IP 32953 general secretion pathway protein C YP_071571.1 3616453 R 273123 CDS YP_071572.1 51597381 2954587 complement(3617024..3617440) 1 NC_006155.1 similar to Yersinia pestis YPO0818 hypothetical protein (100% evalue=4.E-77); hypothetical protein 3617440 2954587 YPTB3067 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071572.1 3617024 R 273123 CDS YP_071573.1 51597382 2954588 complement(3618183..3618938) 1 NC_006155.1 similar to Yersinia pestis YPO0819 carbonic anhydrase (100% evalue=1.E-138); Salmonella typhimurium PSLT046 carbonic anhydrase (61.3% evalue=7.E-82); carbonic anhydrase 3618938 2954588 YPTB3068 Yersinia pseudotuberculosis IP 32953 carbonic anhydrase YP_071573.1 3618183 R 273123 CDS YP_071574.1 51597383 2954589 3619262..3619621 1 NC_006155.1 similar to Yersinia pestis YPO0820 hypothetical protein (95.6% evalue=5.E-48); hypothetical protein 3619621 2954589 YPTB3069 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071574.1 3619262 D 273123 CDS YP_071575.1 51597384 2954590 3620008..3620202 1 NC_006155.1 similar to Yersinia pestis YPO0821 hypothetical protein, 98% identical; hypothetical protein 3620202 2954590 YPTB3070 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071575.1 3620008 D 273123 CDS YP_071576.1 51597385 2954591 3620224..3621174 1 NC_006155.1 similar to Yersinia pestis YPO0822 exported protein (100% evalue=0); hypothetical protein 3621174 2954591 YPTB3071 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071576.1 3620224 D 273123 CDS YP_071577.1 51597386 2954592 3621289..3623475 1 NC_006155.1 similar to Yersinia pestis YPO0823 exported protein (100% evalue=0); Rickettsia conorii RC1085 rompB; outer membrane protein B (cell surface antigen sca5) (21.9% evalue=9.E-12); autotransporter domain-containing protein 3623475 2954592 YPTB3072 Yersinia pseudotuberculosis IP 32953 autotransporter domain-containing protein YP_071577.1 3621289 D 273123 CDS YP_071578.1 51597387 2954593 3623545..3626658 1 NC_006155.1 similar to Yersinia pestis YPO0824 exported protein (99.9% evalue=0); chondroitin ABC lyase 3626658 2954593 YPTB3073 Yersinia pseudotuberculosis IP 32953 chondroitin ABC lyase YP_071578.1 3623545 D 273123 CDS YP_071579.1 51597388 2954594 complement(3627098..3628651) 1 NC_006155.1 similar to Yersinia pestis YPO0829 sulfatase (99.8% evalue=0); Salmonella typhimurium STM0035 arylsulfatase (24.3% evalue=2.E-26); sulfatase 3628651 2954594 YPTB3074 Yersinia pseudotuberculosis IP 32953 sulfatase YP_071579.1 3627098 R 273123 CDS YP_071580.1 51597389 2954595 3629491..3630267 1 NC_006155.1 similar to Yersinia pestis YPO0831 DeoR-family regulatory protein (99.6% evalue=1.E-138); Escherichia coli JW3100 agaR; aga operon transcriptional repressor (46.6% evalue=8.E-58); DeoR family regulatory protein 3630267 2954595 YPTB3075 Yersinia pseudotuberculosis IP 32953 DeoR family regulatory protein YP_071580.1 3629491 D 273123 CDS YP_071581.1 51597390 2955178 3630317..3631615 1 NC_006155.1 similar to Yersinia pestis YPO0832 agaZ; tagatose 6-phosphate kinase (99.7% evalue=0); Escherichia coli b3132 agaZ; tagatose 6-phosphate kinase agaZ (63.5% evalue=1.E-153); tagatose 6-phosphate kinase 3631615 agaZ 2955178 agaZ Yersinia pseudotuberculosis IP 32953 tagatose 6-phosphate kinase YP_071581.1 3630317 D 273123 CDS YP_071582.1 51597391 2954596 3631612..3632778 1 NC_006155.1 similar to Yersinia pestis YPO0833 phosphosugar isomerase (99.7% evalue=0); Escherichia coli b3136 agaS; agaS protein (48.6% evalue=2.E-96); phosphosugar isomerase 3632778 2954596 YPTB3077 Yersinia pseudotuberculosis IP 32953 phosphosugar isomerase YP_071582.1 3631612 D 273123 CDS YP_071583.1 51597392 2955997 3632796..3633293 1 NC_006155.1 similar to Yersinia pestis YPO0834 manX; PTS system, N-acetylgalactosamine-specific II component (100% evalue=8.E-92); Escherichia coli Z4485 agaV; PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (48.7% evalue=8.E-38); PTS system N-acetylgalactosamine-specific transporter subunit IIB 3633293 manX 2955997 manX Yersinia pseudotuberculosis IP 32953 PTS system N-acetylgalactosamine-specific transporter subunit IIB YP_071583.1 3632796 D 273123 CDS YP_071584.1 51597393 2954597 3633340..3634128 1 NC_006155.1 similar to Yersinia pestis YPO0835 PTS permease (100% evalue=1.E-147); Escherichia coli ECs4012 N-acetylgalactosamine-specific PTS system enzyme IIC component (44.2% evalue=1.E-56); PTS system transporter subunit IIC 3634128 2954597 YPTB3079 Yersinia pseudotuberculosis IP 32953 PTS system transporter subunit IIC YP_071584.1 3633340 D 273123 CDS YP_071585.1 51597394 2954598 3634118..3635008 1 NC_006155.1 similar to Yersinia pestis YPO0836 PTS permease (100% evalue=1.E-166); Escherichia coli ECs4013 N-acetylgalactosamine-specific PTS system enzyme IID component (43.9% evalue=2.E-55); PTS system transporter subunit IID 3635008 2954598 YPTB3080 Yersinia pseudotuberculosis IP 32953 PTS system transporter subunit IID YP_071585.1 3634118 D 273123 CDS YP_071586.1 51597395 2954599 3635094..3635534 1 NC_006155.1 similar to Yersinia pestis YPO0837 PTS system, N-acetylgalactosamine-specific II component, (99.3% evalue=2.E-74); Escherichia coli ECs4014 N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component (38.9% evalue=3.E-20); PTS system N-acetylgalactosamine-specific transporter subunit IIA 3635534 2954599 YPTB3081 Yersinia pseudotuberculosis IP 32953 PTS system N-acetylgalactosamine-specific transporter subunit IIA YP_071586.1 3635094 D 273123 CDS YP_071587.1 51597396 2954600 3635537..3636703 1 NC_006155.1 similar to Yersinia pestis YPO0838 acetylglucosamine-6-phosphate deacetylase (100% evalue=0); Escherichia coli ECs4015 N-acetylgalactosamine-6-phosphate deacetylase (40.4% evalue=1.E-65); acetylglucosamine-6-phosphate deacetylase 3636703 2954600 YPTB3082 Yersinia pseudotuberculosis IP 32953 acetylglucosamine-6-phosphate deacetylase YP_071587.1 3635537 D 273123 CDS YP_071588.1 51597397 2955923 3636899..3637654 1 NC_006155.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 3637654 kduD2 2955923 kduD2 Yersinia pseudotuberculosis IP 32953 2-deoxy-D-gluconate 3-dehydrogenase YP_071588.1 3636899 D 273123 CDS YP_071589.1 51597398 2954601 3637670..3638728 1 NC_006155.1 similar to Yersinia pestis YPO0840 conserved hypothetical protein (100% evalue=0); Agrobacterium tumefaciens Atu4561 conserved hypothetical protein (32.4% evalue=7.E-13); hypothetical protein 3638728 2954601 YPTB3084 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071589.1 3637670 D 273123 CDS YP_071590.1 51597399 2954602 3639159..3640385 1 NC_006155.1 similar to Yersinia pestis YPO0841 regulatory protein (99.7% evalue=0); Pasteurella multocida PM0600 arylsulfatase regulator (61.5% evalue=1.E-141); Chondro-6-sulfatase 3640385 2954602 YPTB3085 Yersinia pseudotuberculosis IP 32953 Chondro-6-sulfatase YP_071590.1 3639159 D 273123 CDS YP_071591.1 51597400 2954603 3640406..3642013 1 NC_006155.1 similar to Yersinia pestis YPO0842 sulfatase (99.8% evalue=0); Escherichia coli ECs2103 sulfatase (40.3% evalue=1.E-110); sulfatase 3642013 2954603 YPTB3086 Yersinia pseudotuberculosis IP 32953 sulfatase YP_071591.1 3640406 D 273123 CDS YP_071592.1 51597401 2954604 3642136..3643623 1 NC_006155.1 similar to Yersinia pestis YPO0843 hypothetical protein (98.5% evalue=0); Sinorhizobium meliloti SMb20536 hypothetical protein (28.2% evalue=3.E-22); hypothetical protein 3643623 2954604 YPTB3087 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071592.1 3642136 D 273123 CDS YP_071593.1 51597402 2955177 3643734..3644588 1 NC_006155.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase 3644588 gatY 2955177 gatY Yersinia pseudotuberculosis IP 32953 tagatose-bisphosphate aldolase YP_071593.1 3643734 D 273123 CDS YP_071594.1 51597403 2954605 3644612..3645190 1 NC_006155.1 similar to Yersinia pestis YPO0845 ThiJ/PfpI-family thiamine biogenesis protein (99.4% evalue=1.E-106); Salmonella typhimurium STM1931 araH; intracellular protease/amidase (50.8% evalue=1.E-44); ThiJ/PfpI-family thiamine biogenesis protein 3645190 2954605 YPTB3089 Yersinia pseudotuberculosis IP 32953 ThiJ/PfpI-family thiamine biogenesis protein YP_071594.1 3644612 D 273123 CDS YP_071595.1 51597404 2954606 complement(3645160..3645441) 1 NC_006155.1 hypothetical protein 3645441 2954606 YPTB3090 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071595.1 3645160 R 273123 CDS YP_071596.1 51597405 2954607 complement(3645431..3646513) 1 NC_006155.1 similar to Yersinia pestis YPO0846 LacI-family regulatory protein (100% evalue=0); Sinorhizobium meliloti SMb20537 transcriptional regulator protein (27.8% evalue=9.E-24); LacI-family regulatory protein 3646513 2954607 YPTB3091 Yersinia pseudotuberculosis IP 32953 LacI-family regulatory protein YP_071596.1 3645431 R 273123 CDS YP_071597.1 51597406 2954608 3646907..3648214 1 NC_006155.1 similar to Yersinia pestis YPO0847 sugar transporter (99.7% evalue=0); Ralstonia solanacearum RS04107 exuT2, RSc1080; hexuronate transporter transmembrane protein (46.9% evalue=1.E-116); MFS superfamily hexuronate transporter 3648214 2954608 YPTB3092 Yersinia pseudotuberculosis IP 32953 MFS superfamily hexuronate transporter YP_071597.1 3646907 D 273123 CDS YP_071598.1 51597407 2954609 3648363..3650738 1 NC_006155.1 similar to Yersinia pestis YPO0848 glucosidase (99.6% evalue=0); B. halodurans BH0704 glucosidase (52.5% evalue=0); glucosidase family protein 3650738 2954609 YPTB3093 Yersinia pseudotuberculosis IP 32953 glucosidase family protein YP_071598.1 3648363 D 273123 CDS YP_071599.1 51597408 2955929 complement(3650877..3651950) 1 NC_006155.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor 3651950 lacI 2955929 lacI Yersinia pseudotuberculosis IP 32953 lac repressor YP_071599.1 3650877 R 273123 CDS YP_071600.1 51597409 2955933 3652222..3653481 1 NC_006155.1 porin involved in the transport of maltose and maltodextrins; maltoporin 3653481 lamB 2955933 lamB Yersinia pseudotuberculosis IP 32953 maltoporin YP_071600.1 3652222 D 273123 CDS YP_071601.1 51597410 2955282 complement(3654309..3656369) 1 NC_006155.1 similar to Yersinia pestis YPO0852 bgaB, pbg; puative beta-galactosidase (100% evalue=0); C. perfringens CPE0167 pbg; beta-galactosidase (51.3% evalue=0); beta-galactosidase 3656369 bgaB 2955282 bgaB Yersinia pseudotuberculosis IP 32953 beta-galactosidase YP_071601.1 3654309 R 273123 CDS YP_071602.1 51597411 2954611 complement(3656420..3657622) 1 NC_006155.1 similar to Yersinia pestis YPO0853 galactosidase (100% evalue=0); Thermotoga maritima TM1201 arabinogalactan endo-1,4-beta-galactosidase, (49.2% evalue=1.E-104); galactosidase 3657622 2954611 YPTB3098 Yersinia pseudotuberculosis IP 32953 galactosidase YP_071602.1 3656420 R 273123 CDS YP_071603.1 51597412 2954612 complement(3657627..3658478) 1 NC_006155.1 similar to Yersinia pestis YPO0854 maltodextrin permease (100% evalue=1.E-156); B. halodurans BH2021 maltose/maltodextrin transport system permease (69.6% evalue=1.E-110); maltodextrin ABC transporter permease 3658478 2954612 YPTB3099 Yersinia pseudotuberculosis IP 32953 maltodextrin ABC transporter permease YP_071603.1 3657627 R 273123 CDS YP_071604.1 51597413 2954613 complement(3658490..3659797) 1 NC_006155.1 similar to Yersinia pestis YPO0855 maltodextrin transport permease (99.7% evalue=0); Bacillus subtilis BG12437 yvfL; maltose/maltodextrin transport system permease (68.2% evalue=1.E-175); maltodextrin ABC transporter permease 3659797 2954613 YPTB3100 Yersinia pseudotuberculosis IP 32953 maltodextrin ABC transporter permease YP_071604.1 3658490 R 273123 CDS YP_071605.1 51597414 2954614 complement(3659957..3661192) 1 NC_006155.1 similar to Yersinia pestis YPO0856 sugar-binding protein (100% evalue=0); Bacillus subtilis BG12436 yvfK; maltose/maltodextrin transport system substrate-binding protein (49% evalue=1.E-106); sugar(maltose) ABC transporter substrate-binding protein 3661192 2954614 YPTB3101 Yersinia pseudotuberculosis IP 32953 sugar(maltose) ABC transporter substrate-binding protein YP_071605.1 3659957 R 273123 CDS YP_071606.1 51597415 2954615 3661555..3662661 1 NC_006155.1 similar to Yersinia pestis YPO0857 sugar transport ATP-binding protein (99.4% evalue=0); Ralstonia solanacearum RS01463 probable sugar ATP-binding ABC transporter protein (56.3% evalue=1.E-108); sugar ABC transporter ATP-binding protein 3662661 2954615 YPTB3102 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_071606.1 3661555 D 273123 CDS YP_071607.1 51597416 2954616 3663200..3664708 1 NC_006155.1 similar to Yersinia pestis YPO0858 sugar transport ATP-binding protein (99.2% evalue=0); Brucella melitensis BMEI0391 sugar transport ATP-binding protein (52.4% evalue=1.E-133); sugar ABC transporter ATPase 3664708 2954616 YPTB3103 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_071607.1 3663200 D 273123 CDS YP_071608.1 51597417 2954617 3664758..3665786 1 NC_006155.1 similar to Yersinia pestis YPO0859 sugar transport system permease (99.7% evalue=0); Brucella melitensis BMEI0392 ribose transport system permease RbsC (54.4% evalue=2.E-98); sugar ABC transporter permease 3665786 2954617 YPTB3104 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071608.1 3664758 D 273123 CDS YP_071609.1 51597418 2954618 3666203..3667204 1 NC_006155.1 similar to Yersinia pestis YPO0860 sugar-binding periplasmic protein (100% evalue=0); Brucella melitensis BMEI0393 D-ribose-binding periplasmic protein precursor (55.3% evalue=2.E-94); sugar ABC transporter substrate-binding protein 3667204 2954618 YPTB3105 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_071609.1 3666203 D 273123 CDS YP_071610.1 51597419 2954619 3667983..3668501 1 NC_006155.1 similar to Yersinia pestis YPO0862 exported protein (100% evalue=8.E-95); hypothetical protein 3668501 2954619 YPTB3106 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071610.1 3667983 D 273123 CDS YP_071611.1 51597420 2954620 3668877..3669734 1 NC_006155.1 similar to Yersinia pestis YPO0863 lipoprotein (100% evalue=1.E-162); Escherichia coli b0193 yaeF; hypothetical 32.1 kD lipoprotein in cutF-proS intergenic region precursor (43.2% evalue=1.E-51); hypothetical protein 3669734 2954620 YPTB3107 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071611.1 3668877 D 273123 CDS YP_071612.1 51597421 2954621 3670177..3670857 1 NC_006155.1 similar to Yersinia pestis YPO0864 conserved hypothetical protein (99.5% evalue=1.E-128); Caulobacter crescentus CC3691 conserved hypothetical protein (46.3% evalue=1.E-27); hypothetical protein 3670857 2954621 YPTB3108 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071612.1 3670177 D 273123 CDS YP_071613.1 51597422 2954622 3670857..3671177 1 NC_006155.1 similar to Yersinia pestis YPO0865 hypothetical protein (99% evalue=2.E-55); hypothetical protein 3671177 2954622 YPTB3109 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071613.1 3670857 D 273123 CDS YP_071614.1 51597423 2954623 complement(3671276..3671581) 1 NC_006155.1 similar to Yersinia pestis YPO0866 conserved hypothetical protein (99% evalue=7.E-55); Ralstonia solanacearum RS00394 conserved hypothetical protein (46.9% evalue=3.E-12); hypothetical protein 3671581 2954623 YPTB3110 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071614.1 3671276 R 273123 CDS YP_071615.1 51597424 2954624 complement(3671798..3672577) 1 NC_006155.1 similar to Yersinia pestis YPO0867 membrane protein (100% evalue=1.E-143); hypothetical protein 3672577 2954624 YPTB3111 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071615.1 3671798 R 273123 CDS YP_071616.1 51597425 2954625 complement(3673182..3673898) 1 NC_006155.1 similar to Yersinia pestis YPO0869 hypothetical protein (100% evalue=1.E-138); hypothetical protein 3673898 2954625 YPTB3112 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071616.1 3673182 R 273123 CDS YP_071617.1 51597426 2954626 complement(3673919..3676231) 1 NC_006155.1 similar to Yersinia pestis YPO0870 conserved hypothetical protein (99.7% evalue=0); Pseudomonas aeruginosa PA5441 hypothetical protein (32.9% evalue=6.E-86); hypothetical protein 3676231 2954626 YPTB3113 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071617.1 3673919 R 273123 CDS YP_071618.1 51597427 2954627 complement(3676488..3676772) 1 NC_006155.1 similar to Yersinia pestis YPO0871 colicin immunity protein, 98% identical; hypothetical protein 3676772 2954627 YPTB3114 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071618.1 3676488 R 273123 CDS YP_071619.1 51597428 2954628 complement(3676819..3677076) 1 NC_006155.1 similar to Yersinia pestis YPO872 hypothetical protein, 100% identical.; hypothetical protein 3677076 2954628 YPTB3115 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071619.1 3676819 R 273123 CDS YP_071620.1 51597429 2954629 complement(3677589..3679121) 1 NC_006155.1 similar to Yersinia pestis YPO1484 hypothetical protein (76.9% evalue=9.E-39); hypothetical protein 3679121 2954629 YPTB3116 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071620.1 3677589 R 273123 CDS YP_071621.1 51597430 2954630 complement(3679626..3680768) 1 NC_006155.1 similar to Yersinia pestis YPO0874 hypothetical protein (100% evalue=0); Pasteurella multocida PM1770 hypothetical, C. elegans (66% evalue=1.E-141); hypothetical protein 3680768 2954630 YPTB3117 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071621.1 3679626 R 273123 CDS YP_071622.1 51597431 2954631 3681037..3681402 1 NC_006155.1 similar to Yersinia pestis YPO0875 hypothetical protein (99.1% evalue=1.E-67); hypothetical protein 3681402 2954631 YPTB3118 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071622.1 3681037 D 273123 CDS YP_071623.1 51597432 2954632 3681415..3682071 1 NC_006155.1 similar to Yersinia pestis YPO0877 hypothetical protein (72.6% evalue=2.E-37); hypothetical protein 3682071 2954632 YPTB3119 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071623.1 3681415 D 273123 CDS YP_071624.1 51597433 2954633 3682253..3682453 1 NC_006155.1 similar to Yersinia pestis YPO0878 regulatory protein (100% evalue=7.E-33); Escherichia coli Z3946 DNA binding protein (59.6% evalue=8.E-16); DNA binding protein 3682453 2954633 YPTB3120 Yersinia pseudotuberculosis IP 32953 DNA binding protein YP_071624.1 3682253 D 273123 CDS YP_071625.1 51597434 2954634 complement(3682612..3682938) 1 NC_006155.1 phage protein 3682938 2954634 YPTB3121 Yersinia pseudotuberculosis IP 32953 phage protein YP_071625.1 3682612 R 273123 CDS YP_071626.1 51597435 2954635 3683238..3685529 1 NC_006155.1 similar to Yersinia pestis YPO0880 primase (99% evalue=0); Salmonella typhi STY4832 Bacteriophage P4 DNA primase (40.8% evalue=1.E-158); phage primase 3685529 2954635 YPTB3122 Yersinia pseudotuberculosis IP 32953 phage primase YP_071626.1 3683238 D 273123 CDS YP_071627.1 51597436 2954636 complement(3685929..3686327) 1 NC_006155.1 similar to Yersinia pestis YPO0881 conserved hypothetical protein (100% evalue=2.E-72); Escherichia coli JW2989 ygiT; Hypothetical protein (60.3% evalue=9.E-44); DNA binding (HTH) protein 3686327 2954636 YPTB3123 Yersinia pseudotuberculosis IP 32953 DNA binding (HTH) protein YP_071627.1 3685929 R 273123 CDS YP_071628.1 51597437 2954637 complement(3686327..3686644) 1 NC_006155.1 similar to Yersinia pestis YPO0882 conserved hypothetical protein (98.9% evalue=2.E-50); Escherichia coli JW2990 ygiU; Hypothetical protein (68% evalue=1.E-31); hypothetical protein 3686644 2954637 YPTB3124 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071628.1 3686327 R 273123 CDS YP_071629.1 51597438 2954638 complement(3686787..3687149) 1 NC_006155.1 similar to Yersinia pestis YPO4028 regulator (96.6% evalue=1.E-62); DNA binding protein 3687149 2954638 YPTB3125 Yersinia pseudotuberculosis IP 32953 DNA binding protein YP_071629.1 3686787 R 273123 CDS YP_071630.1 51597439 2954639 complement(3687212..3687472) 1 NC_006155.1 similar to Yersinia pestis YPO0884 hypothetical protein (100% evalue=2.E-43); bacteriophage protein 3687472 2954639 YPTB3126 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071630.1 3687212 R 273123 CDS YP_071631.1 51597440 2954642 complement(3688397..3689380) 1 NC_006155.1 similar to Salmonella typhi STY4645 phage integrase (39.8% evalue=3.E-62); Salmonella typhimurium STM2739 Fels-2 prophage: similar to int protein in phage 186 (40.1% evalue=7.E-63); phage integrase/recombinase 3689380 2954642 YPTB3129 Yersinia pseudotuberculosis IP 32953 phage integrase/recombinase YP_071631.1 3688397 R 273123 CDS YP_071632.1 51597441 2954643 complement(3689447..3689794) 1 NC_006155.1 similar to gpC [Enterobacteria phage P2] gb|AAD03298.1| (AF063097) gpC [Enterobacteria phage P2], E()=7.00e-28, 59% identity.; phage repressor protein C 3689794 2954643 YPTB3130 Yersinia pseudotuberculosis IP 32953 phage repressor protein C YP_071632.1 3689447 R 273123 CDS YP_071633.1 51597442 2954644 3689860..3690132 1 NC_006155.1 similar to (AJ306907) Cox protein [Enterobacteria phage P2], evalue=3e-30 Id=68%; bacteriophage Cox protein 3690132 2954644 YPTB3131 Yersinia pseudotuberculosis IP 32953 bacteriophage Cox protein YP_071633.1 3689860 D 273123 CDS YP_071634.1 51597443 2954645 3690338..3690622 1 NC_006155.1 hypothetical protein 3690622 2954645 YPTB3132 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071634.1 3690338 D 273123 CDS YP_071635.1 51597444 2954646 3691181..3691450 1 NC_006155.1 hypothetical protein 3691450 2954646 YPTB3133 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071635.1 3691181 D 273123 CDS YP_071636.1 51597445 2954647 3691680..3692030 1 NC_006155.1 similar to Salmonella typhi STY3664 conserved hypothetical protein (30.9% evalue=2.E-07); hypothetical protein 3692030 2954647 YPTB3134 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071636.1 3691680 D 273123 CDS YP_071637.1 51597446 2954648 3692337..3693002 1 NC_006155.1 similar to Caulobacter crescentus CC0765 conserved hypothetical protein (50% evalue=1.E-07); bacteriophage protein 3693002 2954648 YPTB3135 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071637.1 3692337 D 273123 CDS YP_071638.1 51597447 2954649 3693012..3693713 1 NC_006155.1 similar to Vibrio cholerae VC2233 DNA polymerase III, epsilon subunit (28.5% evalue=1.E-09); Salmonella typhi STY4637 exonuclease (45.3% evalue=3.E-38); bacteriophage protein 3693713 2954649 YPTB3136 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071638.1 3693012 D 273123 CDS YP_071639.1 51597448 2954650 3694060..3696615 1 NC_006155.1 similar to Salmonella typhi STY3668 possible endonuclease (43.8% evalue=0); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (43.1% evalue=1.E-179); phage protein 3696615 2954650 YPTB3137 Yersinia pseudotuberculosis IP 32953 phage protein YP_071639.1 3694060 D 273123 CDS YP_071640.1 51597449 2954651 complement(3696877..3697203) 1 NC_006155.1 bacteriophage phi CTX; similar to orf34; similar to (AB008550) orf34 [bacteriophage phiCTX], E()=7.00e-05, 34% identity; hypothetical protein 3697203 2954651 YPTB3138 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071640.1 3696877 R 273123 CDS YP_071641.1 51597450 2954652 complement(3697200..3698267) 1 NC_006155.1 similar to Salmonella typhi STY4628 probable capsid portal protein (36.4% evalue=4.E-47); Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (36.9% evalue=2.E-47); hypothetical protein 3698267 2954652 YPTB3139 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071641.1 3697200 R 273123 CDS YP_071642.1 51597451 2954653 complement(3698264..3700069) 1 NC_006155.1 similar to Salmonella typhi STY4627 probable terminase subunit (41.5% evalue=1.E-120); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (41.3% evalue=1.E-119); orf16-like phage protein 3700069 2954653 YPTB3140 Yersinia pseudotuberculosis IP 32953 orf16-like phage protein YP_071642.1 3698264 R 273123 CDS YP_071643.1 51597452 2954654 3700242..3701330 1 NC_006155.1 similar to Salmonella typhi STY3676 capsid scaffolding protein (42.8% evalue=7.E-22); Salmonella typhimurium STM2721 Fels-2 prophage: similar to gpO, capsid scaffold, in phage P2 (27.9% evalue=6.E-23); hypothetical protein 3701330 2954654 YPTB3141 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071643.1 3700242 D 273123 CDS YP_071644.1 51597453 2954655 3701365..3702393 1 NC_006155.1 similar to Salmonella typhi STY4625 major capsid protein (30% evalue=2.E-32); Ralstonia solanacearum RS03506 probable bacteriophage protein (29% evalue=4.E-32); phage protein 3702393 2954655 YPTB3142 Yersinia pseudotuberculosis IP 32953 phage protein YP_071644.1 3701365 D 273123 CDS YP_071645.1 51597454 2954656 3702396..3703100 1 NC_006155.1 similar to Salmonella typhi STY4624 phage terminase (23.7% evalue=1.E-09); Salmonella typhimurium STM2719 Fels-2 prophage: similar to gpR in phage 186 (22.8% evalue=1.E-09); hypothetical protein 3703100 2954656 YPTB3143 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071645.1 3702396 D 273123 CDS YP_071646.1 51597455 2954657 3703209..3703682 1 NC_006155.1 similar to Salmonella typhi STY4623 capsid completion protein (23.6% evalue=4.E-07); Salmonella typhi STY3679 capsid completion protein (23.2% evalue=2.E-07); hypothetical protein 3703682 2954657 YPTB3144 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071646.1 3703209 D 273123 CDS YP_071647.1 51597456 2954658 3703679..3704173 1 NC_006155.1 similar to protein 21 (AY027935) [Haemophilus influenzae phage HP2]; hypothetical protein 3704173 2954658 YPTB3145 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071647.1 3703679 D 273123 CDS YP_071648.1 51597457 2954659 3704170..3704829 1 NC_006155.1 similar to protein 22 (U24159) [phage HP1]; hypothetical protein 3704829 2954659 YPTB3146 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071648.1 3704170 D 273123 CDS YP_071649.1 51597458 2954660 3704853..3706019 1 NC_006155.1 similar to protein 23 (AY027935) [Haemophilus influenzae phage HP2]; hypothetical protein 3706019 2954660 YPTB3147 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071649.1 3704853 D 273123 CDS YP_071650.1 51597459 2954661 3706022..3706477 1 NC_006155.1 similar to orf24 [Haemophilus phage HP1] sp|P51726|YO24_BPHP1 TAIL TUBE PROTEIN (ORF24), E()=1.00e-41, 55% identity.; hypothetical protein 3706477 2954661 YPTB3148 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071650.1 3706022 D 273123 CDS YP_071651.1 51597460 2954662 3706487..3706789 1 NC_006155.1 phage P2 holin-like protein 3706789 2954662 YPTB3149 Yersinia pseudotuberculosis IP 32953 phage P2 holin-like protein YP_071651.1 3706487 D 273123 CDS YP_071652.1 51597461 2954663 3706786..3707127 1 NC_006155.1 probable transmembrane domain: 6 26.; hypothetical protein 3707127 2954663 YPTB3150 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071652.1 3706786 D 273123 CDS YP_071653.1 51597462 2954664 3707127..3707501 1 NC_006155.1 hypothetical protein 3707501 2954664 YPTB3151 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071653.1 3707127 D 273123 CDS YP_071654.1 51597463 2954665 3707616..3707891 1 NC_006155.1 hypothetical protein 3707891 2954665 YPTB3152 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071654.1 3707616 D 273123 CDS YP_071655.1 51597464 2954666 3708117..3710093 1 NC_006155.1 similar to Escherichia coli ECs2641 tail protein (25.6% evalue=1.E-16); Escherichia coli Z2987 tail fiber component of prophage CP-933T (25.6% evalue=2.E-16); bacteriophage tail protein 3710093 2954666 YPTB3153 Yersinia pseudotuberculosis IP 32953 bacteriophage tail protein YP_071655.1 3708117 D 273123 CDS YP_071656.1 51597465 2954667 3710090..3710419 1 NC_006155.1 hypothetical protein 3710419 2954667 YPTB3154 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071656.1 3710090 D 273123 CDS YP_071657.1 51597466 2954668 3710416..3711600 1 NC_006155.1 similar to (AY027935) orf29 [Haemophilus influenzae phage HP2], E()=1.00e-109, 48% identity.; bacteriophage protein 3711600 2954668 YPTB3155 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071657.1 3710416 D 273123 CDS YP_071658.1 51597467 2954669 3711593..3712216 1 NC_006155.1 similar to (AY027935) orf30 [Haemophilus influenzae phage HP2], E()=8.00e-42, 48% identity.; bacteriophage protein 3712216 2954669 YPTB3156 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071658.1 3711593 D 273123 CDS YP_071659.1 51597468 2954670 3712226..3713821 1 NC_006155.1 similar to (AY027935) orf31 [Phage HP2] evalue=4e-46, Id=36% in the N-terminal region.; hypothetical protein 3713821 2954670 YPTB3157 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071659.1 3712226 D 273123 CDS YP_071660.1 51597469 2954671 3713821..3714339 1 NC_006155.1 similar to Salmonella typhi STY1073 hypothetical prophage protein (31.7% evalue=1.E-12); Salmonella typhimurium STM2234 tail fiber assembly protein (33.3% evalue=9.E-17); bacteriophage protein 3714339 2954671 YPTB3158 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071660.1 3713821 D 273123 CDS YP_071661.1 51597470 2954672 3714336..3715046 1 NC_006155.1 similar to (AY027935) orf33 [Haemophilus influenzae phage HP2], E()=1.00e-16, 26% identity.; bacteriophage protein 3715046 2954672 YPTB3159 Yersinia pseudotuberculosis IP 32953 bacteriophage protein YP_071661.1 3714336 D 273123 CDS YP_071662.1 51597471 2954673 3715039..3715593 1 NC_006155.1 hypothetical protein 3715593 2954673 YPTB3160 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071662.1 3715039 D 273123 CDS YP_071663.1 51597472 2954674 3715590..3717311 1 NC_006155.1 similar to Pseudomonas aeruginosa PA0095 conserved hypothetical protein (23.3% evalue=5.E-09); hypothetical protein 3717311 2954674 YPTB3161 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071663.1 3715590 D 273123 CDS YP_071664.1 51597473 2955892 complement(3718038..3719252) 1 NC_006155.1 similar to Yersinia pestis YPO0887 int; integrase (99.7% evalue=0); Escherichia coli ECs4534 integrase (65.5% evalue=1.E-153); phage integrase 3719252 int 2955892 int Yersinia pseudotuberculosis IP 32953 phage integrase YP_071664.1 3718038 R 273123 CDS YP_071665.1 51597474 2955980 complement(3719685..3721202) 1 NC_006155.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3721202 lysS 2955980 lysS Yersinia pseudotuberculosis IP 32953 lysyl-tRNA synthetase YP_071665.1 3719685 R 273123 CDS YP_071666.1 51597475 2954675 complement(join(3721212..3722237,3722236..3722310)) 1 NC_006155.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 3722310 prfB 2954675 prfB Yersinia pseudotuberculosis IP 32953 peptide chain release factor 2 YP_071666.1 3721212 R 273123 CDS YP_071667.1 51597476 2956418 complement(3722489..3724222) 1 NC_006155.1 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ 3724222 recJ 2956418 recJ Yersinia pseudotuberculosis IP 32953 ssDNA exonuclease RecJ YP_071667.1 3722489 R 273123 CDS YP_071668.1 51597477 2955488 complement(3724229..3724945) 1 NC_006155.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 3724945 dsbC 2955488 dsbC Yersinia pseudotuberculosis IP 32953 thiol:disulfide interchange protein DsbC YP_071668.1 3724229 R 273123 CDS YP_071669.1 51597478 2956907 complement(3724976..3725875) 1 NC_006155.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 3725875 xerD 2956907 xerD Yersinia pseudotuberculosis IP 32953 site-specific tyrosine recombinase XerD YP_071669.1 3724976 R 273123 CDS YP_071670.1 51597479 2955556 3725982..3726500 1 NC_006155.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 3726500 fldB 2955556 fldB Yersinia pseudotuberculosis IP 32953 flavodoxin FldB YP_071670.1 3725982 D 273123 CDS YP_071671.1 51597480 2955360 complement(3726585..3728063) 1 NC_006155.1 similar to Yersinia pestis YPO0894 creD; membrane protein (99.7% evalue=0); Escherichia coli Z6003 creD; tolerance to colicin E2 (47.4% evalue=1.E-111); hypothetical protein 3728063 creD 2955360 creD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071671.1 3726585 R 273123 CDS YP_071672.1 51597481 2955359 complement(3728163..3729581) 1 NC_006155.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 3729581 creC 2955359 creC Yersinia pseudotuberculosis IP 32953 sensory histidine kinase CreC YP_071672.1 3728163 R 273123 CDS YP_071673.1 51597482 2955358 complement(3729592..3730290) 1 NC_006155.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB 3730290 creB 2955358 creB Yersinia pseudotuberculosis IP 32953 DNA-binding response regulator CreB YP_071673.1 3729592 R 273123 CDS YP_071674.1 51597483 2954676 complement(3730290..3730715) 1 NC_006155.1 similar to Yersinia pestis YPO0896a conserved hypothetical protein (99.2% evalue=2.E-81); Escherichia coli JW2864 ygfX; Hypothetical protein (52.3% evalue=5.E-36); hypothetical protein 3730715 2954676 YPTB3172 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071674.1 3730290 R 273123 CDS YP_071675.1 51597484 2954677 complement(3730696..3730962) 1 NC_006155.1 similar to Yersinia pestis YPO0897 conserved hypothetical protein (100% evalue=9.E-48); Escherichia coli ECs3769 hypothetical protein (81.8% evalue=2.E-39); hypothetical protein 3730962 2954677 YPTB3173 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071675.1 3730696 R 273123 CDS YP_071676.1 51597485 2954678 3731279..3732271 1 NC_006155.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator 3732271 2954678 YPTB3174 Yersinia pseudotuberculosis IP 32953 global regulator YP_071676.1 3731279 D 273123 CDS YP_071677.1 51597486 2954679 complement(3732344..3732841) 1 NC_006155.1 similar to Yersinia pestis YPO0899 membrane protein (100% evalue=3.E-93); Ralstonia solanacearum RS01761 hypothetical transmembrane protein (45.2% evalue=1.E-34); hypothetical protein 3732841 2954679 YPTB3175 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071677.1 3732344 R 273123 CDS YP_071678.1 51597487 2954680 complement(3733099..3733800) 1 NC_006155.1 similar to Yersinia pestis YPO0900 hemolysin III (99.1% evalue=1.E-129); Salmonella typhimurium STM3049 yqfA; hemolysin (78.4% evalue=3.E-94); hemolysin III 3733800 2954680 YPTB3176 Yersinia pseudotuberculosis IP 32953 hemolysin III YP_071678.1 3733099 R 273123 CDS YP_071679.1 51597488 2954681 complement(3734001..3735104) 1 NC_006155.1 similar to Yersinia pestis YPO1686 exported protein (61.2% evalue=1.E-111); hypothetical protein 3735104 2954681 YPTB3177 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071679.1 3734001 R 273123 CDS YP_071680.1 51597489 2954683 complement(3738418..3738855) 1 NC_006155.1 similar to Yersinia pestis YPO1461 hypothetical protein (32.6% evalue=2.E-12); hypothetical protein 3738855 2954683 YPTB3179 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071680.1 3738418 R 273123 CDS YP_071681.1 51597490 2955680 complement(3739233..3742112) 1 NC_006155.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3742112 gcvP 2955680 gcvP Yersinia pseudotuberculosis IP 32953 glycine dehydrogenase YP_071681.1 3739233 R 273123 CDS YP_071682.1 51597491 2955678 complement(3742324..3742710) 1 NC_006155.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3742710 gcsH 2955678 gcsH Yersinia pseudotuberculosis IP 32953 glycine cleavage system protein H YP_071682.1 3742324 R 273123 CDS YP_071683.1 51597492 2955682 complement(3742779..3743876) 1 NC_006155.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3743876 gcvT 2955682 gcvT Yersinia pseudotuberculosis IP 32953 glycine cleavage system aminomethyltransferase T YP_071683.1 3742779 R 273123 CDS YP_071684.1 51597493 2956892 complement(3744597..3745817) 1 NC_006155.1 similar to Yersinia pestis YPO0908 visC; monooxygenase (100% evalue=0); Salmonella typhimurium STM3056 visC; monooxygenase (73.4% evalue=1.E-170); hypothetical protein 3745817 visC 2956892 visC Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071684.1 3744597 R 273123 CDS YP_071685.1 51597494 2956855 complement(3745990..3747168) 1 NC_006155.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 3747168 ubiH 2956855 ubiH Yersinia pseudotuberculosis IP 32953 2-octaprenyl-6-methoxyphenyl hydroxylase YP_071685.1 3745990 R 273123 CDS YP_071686.1 51597495 2956234 complement(3747220..3748533) 1 NC_006155.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 3748533 pepP 2956234 pepP Yersinia pseudotuberculosis IP 32953 proline aminopeptidase P II YP_071686.1 3747220 R 273123 CDS YP_071687.1 51597496 2954684 complement(3748621..3749199) 1 NC_006155.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 3749199 2954684 YPTB3186 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071687.1 3748621 R 273123 CDS YP_071688.1 51597497 2954685 3749536..3749865 1 NC_006155.1 similar to Yersinia pestis YPO0912 conserved hypothetical protein (100% evalue=7.E-56); Escherichia coli Z4247 ygfE; orf, hypothetical protein (79.8% evalue=9.E-45); Z-ring-associated protein 3749865 2954685 YPTB3187 Yersinia pseudotuberculosis IP 32953 Z-ring-associated protein YP_071688.1 3749536 D 273123 CDS YP_071689.1 51597498 2954686 3750229..3750825 1 NC_006155.1 similar to Yersinia pestis YPO0913 5-formyltetrahydrofolate cyclo-ligase-family protein (99.4% evalue=1.E-115); Escherichia coli b2912 ygfA; hypothetical 21.1 kD protein in ssr-serA intergenic region (O182) (69.6% evalue=3.E-72); Methenyl-THF synthetase-family protein (MTHFS) 3750825 2954686 YPTB3188 Yersinia pseudotuberculosis IP 32953 Methenyl-THF synthetase-family protein (MTHFS) YP_071689.1 3750229 D 273123 CDS YP_071690.1 51597499 2956594 complement(3751090..3752331) 1 NC_006155.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3752331 serA 2956594 serA Yersinia pseudotuberculosis IP 32953 D-3-phosphoglycerate dehydrogenase YP_071690.1 3751090 R 273123 CDS YP_071691.1 51597500 2956485 complement(3752638..3753294) 1 NC_006155.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 3753294 rpiA 2956485 rpiA Yersinia pseudotuberculosis IP 32953 ribose-5-phosphate isomerase A YP_071691.1 3752638 R 273123 CDS YP_071692.1 51597501 2955864 3753636..3754544 1 NC_006155.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3754544 iciA 2955864 iciA Yersinia pseudotuberculosis IP 32953 chromosome replication initiation inhibitor protein YP_071692.1 3753636 D 273123 CDS YP_071693.1 51597502 2957050 complement(3754555..3755334) 1 NC_006155.1 similar to Yersinia pestis YPO0917 yggE; exported protein (99.2% evalue=1.E-139); Salmonella typhi STY3221 conserved hypothetical protein (64.9% evalue=7.E-88); hypothetical protein 3755334 yggE 2957050 yggE Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071693.1 3754555 R 273123 CDS YP_071694.1 51597503 2954687 complement(3755524..3756141) 1 NC_006155.1 Involved in the export of arginine; arginine exporter protein 3756141 2954687 YPTB3193 Yersinia pseudotuberculosis IP 32953 arginine exporter protein YP_071694.1 3755524 R 273123 CDS YP_071695.1 51597504 2954688 complement(3756404..3757273) 1 NC_006155.1 similar to Yersinia pestis YPO0919 membrane protein (100% evalue=1.E-157); Salmonella typhi STY3223 membrane protein (66.4% evalue=1.E-105); MscS family mechanosensitive ion channel protein 3757273 2954688 YPTB3194 Yersinia pseudotuberculosis IP 32953 MscS family mechanosensitive ion channel protein YP_071695.1 3756404 R 273123 CDS YP_071696.2 161760562 2955530 complement(3757711..3758778) 1 NC_006155.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 3758778 fbaA 2955530 fbaA Yersinia pseudotuberculosis IP 32953 fructose-bisphosphate aldolase YP_071696.2 3757711 R 273123 CDS YP_071697.1 51597506 2956242 complement(3758911..3760074) 1 NC_006155.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3760074 pgk 2956242 pgk Yersinia pseudotuberculosis IP 32953 phosphoglycerate kinase YP_071697.1 3758911 R 273123 CDS YP_071698.1 51597507 2955509 complement(3760177..3761193) 1 NC_006155.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 3761193 epd 2955509 epd Yersinia pseudotuberculosis IP 32953 erythrose 4-phosphate dehydrogenase YP_071698.1 3760177 R 273123 CDS YP_071699.1 51597508 2956707 complement(3761572..3763566) 1 NC_006155.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3763566 tktA 2956707 tktA Yersinia pseudotuberculosis IP 32953 transketolase YP_071699.1 3761572 R 273123 CDS YP_071700.1 51597509 2954689 3764057..3764809 1 NC_006155.1 similar to Yersinia pestis YPO0927 metalloprotease (99.6% evalue=1.E-137); Salmonella typhi STY3237 metalloprotease (73.8% evalue=1.E-104); lipoprotein 3764809 2954689 YPTB3199 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071700.1 3764057 D 273123 CDS YP_071701.1 51597510 2954690 complement(3764921..3765241) 1 NC_006155.1 similar to Yersinia pestis YPO0928 Rieske protein (100% evalue=8.E-60); Ralstonia solanacearum RS04099 nagAb, RSc1088; probable ferredoxin subunit of A ring-hydroxylating dioxygenase oxidoreductase (39.3% evalue=6.E-17); Rieske protein 3765241 2954690 YPTB3200 Yersinia pseudotuberculosis IP 32953 Rieske protein YP_071701.1 3764921 R 273123 CDS YP_071702.1 51597511 2956713 complement(3765452..3765910) 1 NC_006155.1 similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase IS1541 3765910 tnp 2956713 tnp Yersinia pseudotuberculosis IP 32953 transposase IS1541 YP_071702.1 3765452 R 273123 CDS YP_071703.1 51597512 2956623 complement(3766111..3768090) 1 NC_006155.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 3768090 speA 2956623 speA Yersinia pseudotuberculosis IP 32953 arginine decarboxylase YP_071703.1 3766111 R 273123 CDS YP_071704.1 51597513 2956028 3769297..3770451 1 NC_006155.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3770451 metK 2956028 metK Yersinia pseudotuberculosis IP 32953 S-adenosylmethionine synthetase YP_071704.1 3769297 D 273123 CDS YP_071705.1 51597514 2956632 3770644..3771156 1 NC_006155.1 similar to Yersinia pestis YPO0932 conserved hypothetical protein (98.2% evalue=1.E-96); Escherichia coli b2944 sprT; sprT protein (69.1% evalue=3.E-63); hypothetical protein 3771156 SprT 2956632 SprT Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071705.1 3770644 D 273123 CDS YP_071706.1 51597515 2955505 3771254..3771961 1 NC_006155.1 similar to Yersinia pestis YPO0933 endA, nucM; endonuclease I (100% evalue=1.E-142); Salmonella typhimurium STM3093 endA; DNA-specific endonuclease I (76.1% evalue=1.E-108); endonuclease I 3771961 endA 2955505 endA Yersinia pseudotuberculosis IP 32953 endonuclease I YP_071706.1 3771254 D 273123 CDS YP_071707.1 51597516 2954691 3772297..3773028 1 NC_006155.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3773028 2954691 YPTB3206 Yersinia pseudotuberculosis IP 32953 16S ribosomal RNA methyltransferase RsmE YP_071707.1 3772297 D 273123 CDS YP_071708.1 51597517 2955751 3773054..3774013 1 NC_006155.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3774013 gshB 2955751 gshB Yersinia pseudotuberculosis IP 32953 glutathione synthetase YP_071708.1 3773054 D 273123 CDS YP_071709.1 51597518 2954692 3774129..3774692 1 NC_006155.1 similar to Yersinia pestis YPO0936 conserved hypothetical protein (99.4% evalue=1.E-103); Salmonella typhi STY3249 conserved hypothetical protein (70% evalue=3.E-71); hypothetical protein 3774692 2954692 YPTB3208 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071709.1 3774129 D 273123 CDS YP_071710.1 51597519 2954693 3774692..3775114 1 NC_006155.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3775114 2954693 YPTB3209 Yersinia pseudotuberculosis IP 32953 Holliday junction resolvase-like protein YP_071710.1 3774692 D 273123 CDS YP_071711.1 51597520 2954694 3775294..3776178 1 NC_006155.1 similar to Yersinia pestis YPO0938 carbon-nitrogen hydrolase (100% evalue=1.E-170); Pseudomonas aeruginosa PA0293 probable hydratase (64.1% evalue=1.E-107); carbon-nitrogen hydrolase 3776178 2954694 YPTB3210 Yersinia pseudotuberculosis IP 32953 carbon-nitrogen hydrolase YP_071711.1 3775294 D 273123 CDS YP_071712.1 51597521 2954695 3776182..3777297 1 NC_006155.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 3777297 2954695 YPTB3211 Yersinia pseudotuberculosis IP 32953 agmatine deiminase YP_071712.1 3776182 D 273123 CDS YP_071713.1 51597522 2954696 complement(3777406..3778530) 1 NC_006155.1 similar to Yersinia pestis YPO0940 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs3827 protein transport (56.9% evalue=1.E-93); MTB family outer membrane protein 3778530 2954696 YPTB3212 Yersinia pseudotuberculosis IP 32953 MTB family outer membrane protein YP_071713.1 3777406 R 273123 CDS YP_071714.1 51597523 2954697 3778550..3779248 1 NC_006155.1 similar to Yersinia pestis YPO0941 conserved hypothetical protein (99.5% evalue=1.E-127); Salmonella typhi STY3253 conserved hypothetical protein (70.1% evalue=4.E-84); hypothetical protein 3779248 2954697 YPTB3213 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071714.1 3778550 D 273123 CDS YP_071715.1 51597524 2956324 3779381..3780202 1 NC_006155.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3780202 proC 2956324 proC Yersinia pseudotuberculosis IP 32953 pyrroline-5-carboxylate reductase YP_071715.1 3779381 D 273123 CDS YP_071716.1 51597525 2957051 3780490..3781044 1 NC_006155.1 similar to Yersinia pestis YPO0943 yggT; membrane protein (89.1% evalue=3.E-87); Escherichia coli ECs3828 resistance protein (57.2% evalue=2.E-57); hypothetical protein 3781044 yggT 2957051 yggT Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071716.1 3780490 D 273123 CDS YP_071717.1 51597526 2954698 3781041..3781331 1 NC_006155.1 similar to Yersinia pestis YPO0944 conserved hypothetical protein (96.8% evalue=2.E-46); Escherichia coli ECs3829 hypothetical protein (81% evalue=5.E-40); hypothetical protein 3781331 2954698 YPTB3216 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071717.1 3781041 D 273123 CDS YP_071718.1 51597527 2954699 3781431..3782024 1 NC_006155.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3782024 2954699 YPTB3217 Yersinia pseudotuberculosis IP 32953 deoxyribonucleotide triphosphate pyrophosphatase YP_071718.1 3781431 D 273123 CDS YP_071719.1 51597528 2954700 3782017..3783147 1 NC_006155.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3783147 2954700 YPTB3218 Yersinia pseudotuberculosis IP 32953 coproporphyrinogen III oxidase YP_071719.1 3782017 D 273123 CDS YP_071720.1 51597529 2954701 complement(3783316..3792627) 1 NC_006155.1 similar to Yersinia pestis YPO0947 virulence determinant (94.8% evalue=0); Vibrio cholerae VC1451 RTX toxin RtxA (32.3% evalue=2.E-28); pore forming RTX toxin family protein 3792627 2954701 YPTB3219 Yersinia pseudotuberculosis IP 32953 pore forming RTX toxin family protein YP_071720.1 3783316 R 273123 CDS YP_071721.1 51597530 2954702 complement(3793132..3793890) 1 NC_006155.1 similar to Salmonella typhi STY3262 conserved hypothetical protein (59.1% evalue=2.E-76); Escherichia coli ECs3834 hypothetical protein (60% evalue=4.E-76); hypothetical protein 3793890 2954702 YPTB3220 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071721.1 3793132 R 273123 CDS YP_071722.1 51597531 2954703 complement(3793978..3794904) 1 NC_006155.1 catalyzes the formation of glutamate from glutamine; glutaminase 3794904 2954703 YPTB3221 Yersinia pseudotuberculosis IP 32953 glutaminase YP_071722.1 3793978 R 273123 CDS YP_071723.1 51597532 2954704 complement(3795015..3795341) 1 NC_006155.1 similar to Yersinia pestis YPO0950 conserved hypothetical protein (100% evalue=6.E-60); Escherichia coli JW2926 yggL; Hypothetical protein (f118) (78.7% evalue=3.E-46); hypothetical protein 3795341 2954704 YPTB3222 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071723.1 3795015 R 273123 CDS YP_071724.1 51597533 2954705 complement(3795341..3796060) 1 NC_006155.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3796060 trmB 2954705 trmB Yersinia pseudotuberculosis IP 32953 tRNA (guanine-N(7)-)-methyltransferase YP_071724.1 3795341 R 273123 CDS YP_071725.1 51597534 2956111 3796473..3797588 1 NC_006155.1 similar to Yersinia pestis YPO0952 mutY, mutB; A/G-specific adenine glycosylase (99.4% evalue=0); Escherichia coli b2961 mutY, micA; A/G-specific adenine glycosylase (75.8% evalue=1.E-158); adenine DNA glycosylase 3797588 mutY 2956111 mutY Yersinia pseudotuberculosis IP 32953 adenine DNA glycosylase YP_071725.1 3796473 D 273123 CDS YP_071726.1 51597535 2954706 3797766..3798038 1 NC_006155.1 similar to Yersinia pestis YPO0953 conserved hypothetical protein (98.8% evalue=8.E-47); Escherichia coli ECs3838 hypothetical protein (83.3% evalue=1.E-39); hypothetical protein 3798038 2954706 YPTB3225 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071726.1 3797766 D 273123 CDS YP_071727.2 161760561 2956051 3798221..3799297 1 NC_006155.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 3799297 mltC 2956051 mltC Yersinia pseudotuberculosis IP 32953 murein transglycosylase C YP_071727.2 3798221 D 273123 CDS YP_071728.2 284987827 2954707 3799579..3800679 1 NC_006155.1 similar to Yersinia pestis YPO1310 periplasmic substrate-binding transport protein (40.7% evalue=4.E-70); hypothetical protein 3800679 2954707 YPTB3227 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071728.2 3799579 D 273123 CDS YP_071729.1 51597538 2954708 3800672..3802816 1 NC_006155.1 similar to Yersinia pestis YPO0956 hydroxamate-type ferrisiderophore receptor (99.7% evalue=0); Pseudomonas aeruginosa PA0151 probable TonB-dependent receptor (50.4% evalue=0); hydroxamate-type ferrisiderophore receptor 3802816 2954708 YPTB3228 Yersinia pseudotuberculosis IP 32953 hydroxamate-type ferrisiderophore receptor YP_071729.1 3800672 D 273123 CDS YP_071730.1 51597539 2954709 complement(3803079..3804098) 1 NC_006155.1 similar to Yersinia pestis YPO0957 sugar transport system permease (100% evalue=0); Sinorhizobium meliloti SMb20854 sugar uptake ABC transporter permease (46% evalue=2.E-66); sugar ABC transporter permease 3804098 2954709 YPTB3229 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071730.1 3803079 R 273123 CDS YP_071731.1 51597540 2956033 complement(3804095..3805594) 1 NC_006155.1 similar to Yersinia pestis YPO0958 mglA, rbsA; sugar transport ATP-binding protein (99.5% evalue=0); Sinorhizobium meliloti SMc02337 ATP-binding ABC transporter protein (47.6% evalue=1.E-125); sugar ABC transporter ATPase 3805594 mglA 2956033 mglA Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_071731.1 3804095 R 273123 CDS YP_071732.1 51597541 2954710 complement(3805640..3806599) 1 NC_006155.1 similar to Yersinia pestis YPO0959 sugar ABC transporter periplasmic binding protein (99% evalue=1.E-179); Sinorhizobium meliloti SMb20856 sugar uptake ABC transporter periplasmic solute-binding protein precursor (39.3% evalue=1.E-58); sugar ABC transporter periplasmic binding protein 3806599 2954710 YPTB3231 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter periplasmic binding protein YP_071732.1 3805640 R 273123 CDS YP_071733.1 51597542 2956624 complement(3807164..3809326) 1 NC_006155.1 similar to Yersinia pestis YPO0960 speC; ornithine decarboxylase (99.8% evalue=0); Escherichia coli Z4310 speC; ornithine decarboxylase isozyme (73.3% evalue=0); ornithine decarboxylase 3809326 speC 2956624 speC Yersinia pseudotuberculosis IP 32953 ornithine decarboxylase YP_071733.1 3807164 R 273123 CDS YP_071734.1 51597543 2955887 complement(3812320..3812595) 1 NC_006155.1 similar to Yersinia pestis YPO0968 insA; insertion sequence protein (98.9% evalue=6.E-49); insertion sequence protein 3812595 insA 2955887 insA Yersinia pseudotuberculosis IP 32953 insertion sequence protein YP_071734.1 3812320 R 273123 CDS YP_071735.1 51597544 2954713 complement(3812691..3813458) 1 NC_006155.1 similar to Yersinia pestis YPO1474 exported protein (33.6% evalue=7.E-27); hypothetical protein 3813458 2954713 YPTB3237 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071735.1 3812691 R 273123 CDS YP_071736.1 51597545 2954714 complement(3813445..3815742) 1 NC_006155.1 similar to Yersinia pestis YPO1473 hypothetical protein (83.5% evalue=0); hypothetical protein 3815742 2954714 YPTB3238 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071736.1 3813445 R 273123 CDS YP_071737.1 51597546 2955888 complement(3817314..3817589) 1 NC_006155.1 similar to Yersinia pestis YPO0968 insA; insertion sequence protein (96.7% evalue=9.E-48); insertion sequence protein 3817589 insA 2955888 insA Yersinia pseudotuberculosis IP 32953 insertion sequence protein YP_071737.1 3817314 R 273123 CDS YP_071738.1 51597547 2954717 complement(3817986..3818486) 1 NC_006155.1 hypothetical protein 3818486 2954717 YPTB3243 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071738.1 3817986 R 273123 CDS YP_071739.1 51597548 2954718 complement(3818487..3820709) 1 NC_006155.1 similar to Yersinia pestis YPO1473 hypothetical protein (46.8% evalue=1.E-179); hypothetical protein 3820709 2954718 YPTB3244 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071739.1 3818487 R 273123 CDS YP_071740.1 51597549 2954719 complement(3820724..3823072) 1 NC_006155.1 similar to Yersinia pestis YPO1472 conserved hypothetical protein (94.3% evalue=0); hypothetical protein 3823072 2954719 YPTB3245 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071740.1 3820724 R 273123 CDS YP_071741.1 51597550 2955337 complement(3823069..3825717) 1 NC_006155.1 similar to Yersinia pestis YPO1471 ATPase subunit of ATP-dependent protease (96.5% evalue=0); Clp ATPase 3825717 clpB3 2955337 clpB3 Yersinia pseudotuberculosis IP 32953 Clp ATPase YP_071741.1 3823069 R 273123 CDS YP_071742.1 51597551 2954720 complement(3826135..3826626) 1 NC_006155.1 similar to Yersinia pestis YPO1470 conserved hypothetical protein (100% evalue=5.E-93); hypothetical protein 3826626 2954720 YPTB3247 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071742.1 3826135 R 273123 CDS YP_071743.1 51597552 2954721 complement(3826630..3828366) 1 NC_006155.1 similar to Yersinia pestis YPO1469 exported protein (99.6% evalue=0); PAL/OmpA family membrane protein 3828366 2954721 YPTB3248 Yersinia pseudotuberculosis IP 32953 PAL/OmpA family membrane protein YP_071743.1 3826630 R 273123 CDS YP_071744.1 51597553 2954722 complement(3828366..3829052) 1 NC_006155.1 similar to Yersinia pestis YPO1468 membrane protein (98.6% evalue=1.E-131); hypothetical protein 3829052 2954722 YPTB3249 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071744.1 3828366 R 273123 CDS YP_071745.1 51597554 2954723 complement(3829049..3830401) 1 NC_006155.1 similar to Yersinia pestis YPO1467 conserved hypothetical protein (99.1% evalue=0); hypothetical protein 3830401 2954723 YPTB3250 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071745.1 3829049 R 273123 CDS YP_071746.1 51597555 2954724 complement(3830413..3831957) 1 NC_006155.1 similar to Yersinia pestis YPO1466 conserved hypothetical protein (100% evalue=0); hypothetical protein 3831957 2954724 YPTB3251 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071746.1 3830413 R 273123 CDS YP_071747.1 51597556 2954725 complement(3832006..3832506) 1 NC_006155.1 similar to Yersinia pestis YPO1465 conserved hypothetical protein (97.5% evalue=5.E-86); hypothetical protein 3832506 2954725 YPTB3252 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071747.1 3832006 R 273123 CDS YP_071748.1 51597557 2955889 complement(3834445..3834708) 1 NC_006155.1 similar to Yersinia pestis YPO0981 insA; insertion element protein (93.1% evalue=1.E-43); insertion element protein 3834708 insA 2955889 insA Yersinia pseudotuberculosis IP 32953 insertion element protein YP_071748.1 3834445 R 273123 CDS YP_071749.1 51597558 2954728 complement(3834776..3835171) 1 NC_006155.1 similar to Yersinia pestis YPO0982 lipoprotein (98.4% evalue=5.E-69); lipoprotein 3835171 2954728 YPTB3256 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071749.1 3834776 R 273123 CDS YP_071750.1 51597559 2954729 complement(3835622..3836272) 1 NC_006155.1 similar to Yersinia pestis YPO0983 membrane protein (100% evalue=1.E-121); Salmonella typhi STY2608 conserved hypothetical protein (42.1% evalue=1.E-46); hypothetical protein 3836272 2954729 YPTB3257 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071750.1 3835622 R 273123 CDS YP_071751.1 51597560 2957121 3837443..3838093 1 NC_006155.1 similar to Yersinia pestis YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI (46.2% evalue=4.E-53); N-acylhomoserine lactone synthase 3838093 yspI 2957121 yspI Yersinia pseudotuberculosis IP 32953 N-acylhomoserine lactone synthase YP_071751.1 3837443 D 273123 CDS YP_071752.1 51597561 2957122 complement(3838074..3838817) 1 NC_006155.1 similar to Yersinia pestis YPO2457 ypeR; quorum-sensing transcriptional activator YpeR (44.8% evalue=9.E-58); quorum-sensing transcriptional regulator 3838817 yspR 2957122 yspR Yersinia pseudotuberculosis IP 32953 quorum-sensing transcriptional regulator YP_071752.1 3838074 R 273123 CDS YP_071753.1 51597562 2954730 3839379..3840737 1 NC_006155.1 similar to Yersinia pestis YPO0986 exported protein (98.6% evalue=0); Thermotoga maritima TM0033 hypothetical protein (26.6% evalue=5.E-34); hypothetical protein 3840737 2954730 YPTB3260 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071753.1 3839379 D 273123 CDS YP_071754.1 51597563 2954731 3841125..3841958 1 NC_006155.1 similar to Yersinia pestis YPO0987 exported protein (98.5% evalue=1.E-155); hypothetical protein 3841958 2954731 YPTB3261 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071754.1 3841125 D 273123 CDS YP_071755.1 51597564 2954732 complement(3842249..3843472) 1 NC_006155.1 similar to Yersinia pestis YPO0988 membrane protein (99.2% evalue=0); Caulobacter crescentus CC0751 multidrug resistance protein, (25% evalue=2.E-19); major facilitator superfamily efflux protein 3843472 2954732 YPTB3262 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily efflux protein YP_071755.1 3842249 R 273123 CDS YP_071756.1 51597565 2956444 3843612..3845384 1 NC_006155.1 similar to Sinorhizobium meliloti SMa2404 rhbC; RhbC rhizobactin siderophore biosynthesis protein (32.1% evalue=3.E-56); Anabaena all0394 hypothetical protein (28.9% evalue=1.E-53); siderophore biosynthesis protein, IucA familly 3845384 rhbC 2956444 rhbC Yersinia pseudotuberculosis IP 32953 siderophore biosynthesis protein, IucA familly YP_071756.1 3843612 D 273123 CDS YP_071757.1 51597566 2955903 3845368..3846318 1 NC_006155.1 similar to Yersinia pestis YPO0991 iucB; siderophore biosynthesis protein IucB (98.1% evalue=0); S. pombe SPBC17G9.06C spbc17g9.06c; hypothetical protein (42.2% evalue=5.E-41); siderophore biosynthesis protein IucB 3846318 iucB 2955903 iucB Yersinia pseudotuberculosis IP 32953 siderophore biosynthesis protein IucB YP_071757.1 3845368 D 273123 CDS YP_071758.1 51597567 2955904 3846315..3848063 1 NC_006155.1 similar to Yersinia pestis YPO0992 iucC; siderophore biosynthesis protein IucC (99.8% evalue=0); Sinorhizobium meliloti SMa2410 rhbF; RhbF rhizobactin siderophore biosynthesis protein RhsF (34.8% evalue=5.E-89); siderophore biosynthesis protein IucC 3848063 iucC 2955904 iucC Yersinia pseudotuberculosis IP 32953 siderophore biosynthesis protein IucC YP_071758.1 3846315 D 273123 CDS YP_071759.1 51597568 2955905 3848060..3849388 1 NC_006155.1 deleted EC_number 1.13.12.10; similar to Yersinia pestis YPO0993 iucD; siderophore biosynthesis protein IucD (99.5% evalue=0); Mesorhizobium loti mlr5923 lysine:N6-hydroxylase (35.5% evalue=4.E-65); siderophore biosynthesis protein IucD 3849388 iucD 2955905 iucD Yersinia pseudotuberculosis IP 32953 siderophore biosynthesis protein IucD YP_071759.1 3848060 D 273123 CDS YP_071760.1 51597569 2955906 3849460..3851640 1 NC_006155.1 similar to Yersinia pestis YPO0994 iutA; ferric siderophore receptor (99.8% evalue=0); Pseudomonas aeruginosa PA4675 probable TonB-dependent receptor (46.8% evalue=0); ferric siderophore receptor 3851640 iutA 2955906 iutA Yersinia pseudotuberculosis IP 32953 ferric siderophore receptor YP_071760.1 3849460 D 273123 CDS YP_071761.1 51597570 2954733 complement(3851947..3853371) 1 NC_006155.1 similar to Yersinia pestis YPO0995 Sodium:galactoside symporter family protein (100% evalue=0); Bacillus subtilis BG12795 gutP, ydjD; probable glucitol symporter (31.7% evalue=1.E-57); Sodium:galactoside symporter (GPH) family protein 3853371 2954733 YPTB3268 Yersinia pseudotuberculosis IP 32953 Sodium:galactoside symporter (GPH) family protein YP_071761.1 3851947 R 273123 CDS YP_071762.1 51597571 2954734 complement(3853533..3854618) 1 NC_006155.1 similar to Mycobacterium tuberculosis Rv3096 hypothetical protein Rv3096 (33.5% evalue=2.E-54); Mycobacterium tuberculosis_CDC1551MT3180 hypothetical protein (33.5% evalue=2.E-54); hypothetical protein 3854618 2954734 YPTB3269 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071762.1 3853533 R 273123 CDS YP_071763.1 51597572 2954735 3854924..3855919 1 NC_006155.1 similar to Yersinia pestis YPO0758 LacI-family regulatory protein (99.3% evalue=0); Mesorhizobium loti mll4964 transcriptional regulator, LacI (ribose operon repressor) family (37% evalue=2.E-50); LacI-family regulatory protein 3855919 2954735 YPTB3270 Yersinia pseudotuberculosis IP 32953 LacI-family regulatory protein YP_071763.1 3854924 D 273123 CDS YP_071764.1 51597573 2954736 3856201..3857580 1 NC_006155.1 similar to Yersinia pestis YPO0759 Sodium:sulfate symporter-family protein (98.6% evalue=0); Pasteurella multocida PM1167 hypothetical HI0608 (60.3% evalue=1.E-154); sodium/sulfate symporter 3857580 2954736 YPTB3271 Yersinia pseudotuberculosis IP 32953 sodium/sulfate symporter YP_071764.1 3856201 D 273123 CDS YP_071765.1 51597574 2954737 complement(3857760..3858173) 1 NC_006155.1 similar to Yersinia pestis YPO0760 membrane protein (100% evalue=3.E-73); Escherichia coli b4011 yjaA; hypothetical 14.4 kD protein in rrfE-metA intergenic region (O127) (40.3% evalue=1.E-16); hypothetical protein 3858173 2954737 YPTB3272 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071765.1 3857760 R 273123 CDS YP_071766.1 51597575 2954738 complement(3858717..3859103) 1 NC_006155.1 similar to Yersinia pestis YPO0761 hypothetical protein (96.2% evalue=1.E-37); hypothetical protein 3859103 2954738 YPTB3273 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071766.1 3858717 R 273123 CDS YP_071767.1 51597576 2954739 complement(3859378..3859902) 1 NC_006155.1 hypothetical protein 3859902 2954739 YPTB3274 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071767.1 3859378 R 273123 CDS YP_071768.1 51597577 2954740 complement(3860127..3860465) 1 NC_006155.1 similar to Ralstonia solanacearum RS02401 hypothetical protein (33.9% evalue=9.E-13); hypothetical protein 3860465 2954740 YPTB3275 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071768.1 3860127 R 273123 CDS YP_071769.1 51597578 2954741 complement(3860595..3861122) 1 NC_006155.1 hypothetical protein 3861122 2954741 YPTB3276 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071769.1 3860595 R 273123 CDS YP_071770.1 51597579 2954744 complement(3864435..3865094) 1 NC_006155.1 hypothetical protein 3865094 2954744 YPTB3279 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071770.1 3864435 R 273123 CDS YP_071771.1 51597580 2954745 complement(3865483..3865908) 1 NC_006155.1 hypothetical protein 3865908 2954745 YPTB3280 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071771.1 3865483 R 273123 CDS YP_071772.1 51597581 2954746 complement(3866252..3866743) 1 NC_006155.1 hypothetical protein 3866743 2954746 YPTB3281 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071772.1 3866252 R 273123 CDS YP_071773.1 51597582 2954747 complement(3866709..3871193) 1 NC_006155.1 similar to Yersinia pestis YPO0762 conserved hypothetical protein (98.4% evalue=0); Salmonella typhi STY0321 Rhs-family protein (27% evalue=5.E-84); hypothetical protein 3871193 2954747 YPTB3282 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071773.1 3866709 R 273123 CDS YP_071774.1 51597583 2954748 complement(3871207..3872526) 1 NC_006155.1 similar to Yersinia pestis YPO0763 hypothetical protein (99.7% evalue=0); hypothetical protein 3872526 2954748 YPTB3283 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071774.1 3871207 R 273123 CDS YP_071775.1 51597584 2954749 complement(3872552..3874777) 1 NC_006155.1 similar to Yersinia pestis YPO3606 Rhs accessory genetic element (77.7% evalue=0); hypothetical protein 3874777 2954749 YPTB3284 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071775.1 3872552 R 273123 CDS YP_071776.1 51597585 2954750 complement(3875363..3879133) 1 NC_006155.1 similar to Yersinia pestis YPO1672 conserved hypothetical protein (79.4% evalue=0); autotransporter secreted protein 3879133 2954750 YPTB3285 Yersinia pseudotuberculosis IP 32953 autotransporter secreted protein YP_071776.1 3875363 R 273123 CDS YP_071777.1 51597586 2954751 complement(3879789..3883553) 1 NC_006155.1 similar to Yersinia pestis YPO1672 conserved hypothetical protein (82.4% evalue=0); autotransporter secreted protein 3883553 2954751 YPTB3286 Yersinia pseudotuberculosis IP 32953 autotransporter secreted protein YP_071777.1 3879789 R 273123 CDS YP_071778.1 51597587 2955733 complement(3884565..3885908) 1 NC_006155.1 similar to Yersinia pestis YPO0767 gntP; gluconate transporter (100% evalue=0); Escherichia coli ECs5280 gluconate transport system permease 3 (82.9% evalue=0); fructuronate transporter 3885908 gntP 2955733 gntP Yersinia pseudotuberculosis IP 32953 fructuronate transporter YP_071778.1 3884565 R 273123 CDS YP_071779.1 51597588 2954752 3887447..3887845 1 NC_006155.1 similar to Yersinia pestis YPO0768 hypothetical protein (100% evalue=5.E-73); hypothetical protein 3887845 2954752 YPTB3288 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071779.1 3887447 D 273123 CDS YP_071780.1 51597589 2954753 3888281..3889156 1 NC_006155.1 similar to Yersinia pestis YPO0769 exported protein (99.6% evalue=1.E-163); Salmonella typhimurium STM2516 sinI; outer membrane protein (27% evalue=7.E-13); hypothetical protein 3889156 2954753 YPTB3289 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071780.1 3888281 D 273123 CDS YP_071781.1 51597590 2954754 complement(3889519..3891276) 1 NC_006155.1 similar to Yersinia pestis YPO0770 ABC-transporter transmembrane protein (99.6% evalue=0); Ralstonia solanacearum RS04233 probable composite ATP-binding transmembrane ABC transporter protein (34% evalue=6.E-85); iron ABC transporter permease 3891276 2954754 YPTB3290 Yersinia pseudotuberculosis IP 32953 iron ABC transporter permease YP_071781.1 3889519 R 273123 CDS YP_071782.1 51597591 2954755 complement(3891269..3893041) 1 NC_006155.1 similar to Yersinia pestis YPO0771 ABC-transporter transmembrane protein (99.3% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (36.7% evalue=1.E-108); iron ABC transporter permease 3893041 2954755 YPTB3291 Yersinia pseudotuberculosis IP 32953 iron ABC transporter permease YP_071782.1 3891269 R 273123 CDS YP_071783.1 51597592 2954756 complement(3893041..3894309) 1 NC_006155.1 similar to Yersinia pestis YPO0772 membrane protein (95.8% evalue=0); Sinorhizobium meliloti SMa2337 transmembrane transport protein (27.2% evalue=1.E-31); major facilitator superfamily AmpG-like permease 3894309 2954756 YPTB3292 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily AmpG-like permease YP_071783.1 3893041 R 273123 CDS YP_071784.1 51597593 2954757 complement(3894299..3895072) 1 NC_006155.1 similar to Yersinia pestis YPO0773 thioesterase (98.4% evalue=1.E-145); Pseudomonas aeruginosa PA4229 pchC; pyochelin biosynthetic protein PchC (38.5% evalue=5.E-41); thioesterase 3895072 2954757 YPTB3293 Yersinia pseudotuberculosis IP 32953 thioesterase YP_071784.1 3894299 R 273123 CDS YP_071785.1 51597594 2954758 complement(3895065..3896192) 1 NC_006155.1 similar to Yersinia pestis YPO0774 conserved hypothetical protein (99.7% evalue=0); Ralstonia solanacearum RS04226 siderophore-like synthase (38.7% evalue=2.E-61); hypothetical protein 3896192 2954758 YPTB3294 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071785.1 3895065 R 273123 CDS YP_071786.1 51597595 2954759 complement(3896189..3897259) 1 NC_006155.1 similar to Yersinia pestis YPO0775 conserved hypothetical protein (98% evalue=0); hypothetical protein 3897259 2954759 YPTB3295 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071786.1 3896189 R 273123 CDS YP_071787.1 51597596 2954760 complement(3897256..3902922) 1 NC_006155.1 similar to Yersinia pestis YPO0776 siderophore biosysnthesis protein (96.2% evalue=0); Pseudomonas aeruginosa PA4225 pchF; pyochelin synthetase (34.3% evalue=0); siderophore biosysnthesis protein 3902922 2954760 YPTB3296 Yersinia pseudotuberculosis IP 32953 siderophore biosysnthesis protein YP_071787.1 3897256 R 273123 CDS YP_071788.1 51597597 2954761 complement(3902935..3914595) 1 NC_006155.1 similar to Yersinia pestis YPO0778 siderophore biosysnthesis protein (96.9% evalue=0); high molecular weight siderophore biosynthesis protein 3914595 2954761 YPTB3297 Yersinia pseudotuberculosis IP 32953 high molecular weight siderophore biosynthesis protein YP_071788.1 3902935 R 273123 CDS YP_071789.1 51597598 2954762 complement(3914746..3916818) 1 NC_006155.1 similar to Yersinia pestis YPO1011 TonB-dependent outer membrane receptor (97.9% evalue=0); Anabaena all4026 similar to TonB-dependent receptor (28.4% evalue=8.E-73); TonB-dependent O.M. iron siderophore receptor/transporter 3916818 2954762 YPTB3298 Yersinia pseudotuberculosis IP 32953 TonB-dependent O.M. iron siderophore receptor/transporter YP_071789.1 3914746 R 273123 CDS YP_071790.1 51597599 2954763 complement(3917202..3918434) 1 NC_006155.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3918434 2954763 YPTB3299 Yersinia pseudotuberculosis IP 32953 peptidase T YP_071790.1 3917202 R 273123 CDS YP_071791.1 51597600 2954764 complement(3918722..3920278) 1 NC_006155.1 similar to Yersinia pestis YPO1008 integral membrane efflux protein (99.6% evalue=0); Vibrio cholerae VC0863 conserved hypothetical protein (47.5% evalue=1.E-140); integral membrane efflux protein 3920278 2954764 YPTB3300 Yersinia pseudotuberculosis IP 32953 integral membrane efflux protein YP_071791.1 3918722 R 273123 CDS YP_071792.1 51597601 2954765 3920994..3922820 1 NC_006155.1 similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (58.1% evalue=0); hypothetical protein 3922820 2954765 YPTB3301 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071792.1 3920994 D 273123 CDS YP_071793.1 51597602 2954766 3923045..3924922 1 NC_006155.1 similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (74% evalue=0); hypothetical protein 3924922 2954766 YPTB3302 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071793.1 3923045 D 273123 CDS YP_071794.1 51597603 2956952 complement(3925028..3936148) 1 NC_006155.1 similar to Yersinia pestis YPO1004 yapH; autotransporter protein (97.8% evalue=0); Escherichia coli JW1502 aidA; Adhesin AIDA-I precursor (47.2% evalue=1.E-124); pertactin family virulence factor/autotransporter 3936148 yapH 2956952 yapH Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071794.1 3925028 R 273123 CDS YP_071795.1 51597604 2954767 complement(3936986..3937573) 1 NC_006155.1 similar to Yersinia pestis YPO1003 exported protein (98.9% evalue=1.E-107); Salmonella typhimurium STM3650 periplasmic or exported protein (64.4% evalue=5.E-59); hypothetical protein 3937573 2954767 YPTB3304 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071795.1 3936986 R 273123 CDS YP_071796.1 51597605 2954768 3937849..3939339 1 NC_006155.1 similar to Yersinia pestis YPO3339 hypothetical protein (27.9% evalue=1.E-33); enterotoxin-like protein 3939339 2954768 YPTB3305 Yersinia pseudotuberculosis IP 32953 enterotoxin-like protein YP_071796.1 3937849 D 273123 CDS YP_071797.1 51597606 2954769 complement(3939458..3942577) 1 NC_006155.1 similar to Yersinia pestis YPO1001 integral membrane efflux protein (99.9% evalue=0); Sinorhizobium meliloti SMa1662 drug resistance protein (50.1% evalue=0); RND family drug efflux protein 3942577 2954769 YPTB3306 Yersinia pseudotuberculosis IP 32953 RND family drug efflux protein YP_071797.1 3939458 R 273123 CDS YP_071798.1 51597607 2954770 complement(3942590..3943900) 1 NC_006155.1 similar to Yersinia pestis YPO1000 drug efflux protein (97% evalue=0); Sinorhizobium meliloti SMa1664 drug resistance protein (37.3% evalue=1.E-64); HlyD family drug efflux protein 3943900 2954770 YPTB3307 Yersinia pseudotuberculosis IP 32953 HlyD family drug efflux protein YP_071798.1 3942590 R 273123 CDS YP_071799.1 51597608 2954771 3944338..3946905 1 NC_006155.1 similar to Yersinia pestis YPO0998 membrane protein (100% evalue=0); Pseudomonas aeruginosa PA2072 conserved hypothetical protein (42.3% evalue=0); hypothetical protein 3946905 2954771 YPTB3308 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071799.1 3944338 D 273123 CDS YP_071800.1 51597609 2954772 3947088..3947603 1 NC_006155.1 similar to Yersinia pestis YPO3931 insertion element IS1661 DNA-binding protein (100% evalue=7.E-97); IS1661 DNA-binding protein 3947603 2954772 YPTB3309 Yersinia pseudotuberculosis IP 32953 IS1661 DNA-binding protein YP_071800.1 3947088 D 273123 CDS YP_071801.1 51597610 2954773 3947657..3948442 1 NC_006155.1 similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.6% evalue=1.E-150); IS1661 transposase 3948442 2954773 YPTB3310 Yersinia pseudotuberculosis IP 32953 IS1661 transposase YP_071801.1 3947657 D 273123 CDS YP_071802.1 51597611 2954774 3949116..3950324 1 NC_006155.1 similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 3950324 2954774 YPTB3311 Yersinia pseudotuberculosis IP 32953 transposase YP_071802.1 3949116 D 273123 CDS YP_071803.1 51597612 2954775 3950348..3950653 1 NC_006155.1 similar to Yersinia pestis YPO0754 membrane protein (98.9% evalue=2.E-51); Escherichia coli JW4119 yjeO; Hypothetical protein (27% evalue=3.E-07); hypothetical protein 3950653 2954775 YPTB3312 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071803.1 3950348 D 273123 CDS YP_071804.1 51597613 2956611 3950902..3951369 1 NC_006155.1 similar to Yersinia pestis YPO2373 slyB, pcpY; lipoprotein (69.6% evalue=4.E-60); Escherichia coli ECs2350 outer membrane protein (61.9% evalue=5.E-53); outer membrane lipoprotein Pcp 3951369 slyB 2956611 slyB Yersinia pseudotuberculosis IP 32953 outer membrane lipoprotein Pcp YP_071804.1 3950902 D 273123 CDS YP_071805.1 51597614 2954776 complement(3951522..3951803) 1 NC_006155.1 similar to Yersinia pestis YPO0751 possible membrane protein, 100% identical.; hypothetical protein 3951803 2954776 YPTB3314 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071805.1 3951522 R 273123 CDS YP_071806.1 51597615 2954777 complement(3951877..3952332) 1 NC_006155.1 similar to Yersinia pestis YPO0750 membrane protein (99.3% evalue=1.E-80); hypothetical protein 3952332 2954777 YPTB3315 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071806.1 3951877 R 273123 CDS YP_071807.1 51597616 2954778 complement(3952329..3952802) 1 NC_006155.1 similar to Yersinia pestis YPO0749 hypothetical protein (100% evalue=1.E-110); hypothetical protein 3952802 2954778 YPTB3316 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071807.1 3952329 R 273123 CDS YP_071808.1 51597617 2954779 complement(3953128..3953316) 1 NC_006155.1 similar to Yersinia pestis YPO0748 hypothetical protein, 98% identical.; hypothetical protein 3953316 2954779 YPTB3317 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071808.1 3953128 R 273123 CDS YP_071809.1 51597618 2956071 complement(3953385..3954179) 1 NC_006155.1 similar to Yersinia pestis YPO0747 motB, lafU; chemotaxis membrane protein (99% evalue=1.E-168); Escherichia coli ECs0256 motility protein (48.2% evalue=3.E-59); hypothetical protein 3954179 motB 2956071 motB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071809.1 3953385 R 273123 CDS YP_071810.1 51597619 2956069 complement(3954296..3955162) 1 NC_006155.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3955162 motA 2956069 motA Yersinia pseudotuberculosis IP 32953 flagellar motor protein MotA YP_071810.1 3954296 R 273123 CDS YP_071811.1 51597620 2955592 complement(3955178..3955873) 1 NC_006155.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 3955873 fliA 2955592 fliA Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis sigma factor YP_071811.1 3955178 R 273123 CDS YP_071812.1 51597621 2954780 complement(3955879..3956349) 1 NC_006155.1 similar to Yersinia pestis YPO0744 flagellar biogenesis protein (91.6% evalue=1.E-75); flagellar biogenesis protein 3956349 2954780 YPTB3321 Yersinia pseudotuberculosis IP 32953 flagellar biogenesis protein YP_071812.1 3955879 R 273123 CDS YP_071813.1 51597622 2954781 complement(3956375..3957472) 1 NC_006155.1 similar to Yersinia pestis YPO0743 flagellar hook-length control protein (86.5% evalue=1.E-180); Vibrio cholerae VC2128 flagellar hook-length control protein FliK, (23.9% evalue=4.E-08); flagellar hook-length control protein 3957472 2954781 YPTB3322 Yersinia pseudotuberculosis IP 32953 flagellar hook-length control protein YP_071813.1 3956375 R 273123 CDS YP_071814.1 51597623 2954782 complement(3957474..3957800) 1 NC_006155.1 similar to Yersinia pestis YPO0742 hypothetical protein (93.5% evalue=7.E-50); hypothetical protein 3957800 2954782 YPTB3323 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071814.1 3957474 R 273123 CDS YP_071815.1 51597624 2955622 complement(3957802..3958185) 1 NC_006155.1 similar to Yersinia pestis YPO0741 fliS, lafC; flagellar protein (96% evalue=2.E-64); Salmonella typhimurium STM1961 fliS; flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) (37.3% evalue=2.E-18); flagellar protein 3958185 fliS 2955622 fliS Yersinia pseudotuberculosis IP 32953 flagellar protein YP_071815.1 3957802 R 273123 CDS YP_071816.1 51597625 2955595 complement(3958195..3959481) 1 NC_006155.1 similar to Yersinia pestis YPO0740 fliD; flagellar hook-associated protein (85.3% evalue=0); Pseudomonas aeruginosa PA1094 fliD; flagellar capping protein FliD (25.2% evalue=3.E-28); flagellar hook-associated protein 3959481 fliD 2955595 fliD Yersinia pseudotuberculosis IP 32953 flagellar hook-associated protein YP_071816.1 3958195 R 273123 CDS YP_071817.1 51597626 2955554 complement(3959701..3960903) 1 NC_006155.1 similar to Yersinia pestis YPO0739 flaA3; flagellin (79% evalue=1.E-165); flagellin 3960903 flaA 2955554 flaA Yersinia pseudotuberculosis IP 32953 flagellin YP_071817.1 3959701 R 273123 CDS YP_071818.1 51597627 2954783 3961527..3962573 1 NC_006155.1 similar to Yersinia pestis YPO0736 regulatory protein (97.7% evalue=0); Vibrio cholerae VC0984 cholera toxin transcriptional activator (26.5% evalue=6.E-09); regulatory protein 3962573 2954783 YPTB3327 Yersinia pseudotuberculosis IP 32953 regulatory protein YP_071818.1 3961527 D 273123 CDS YP_071819.1 51597628 2954784 3962554..3963000 1 NC_006155.1 similar to Yersinia pestis YPO0735 hypothetical protein (98.1% evalue=5.E-56); hypothetical protein 3963000 2954784 YPTB3328 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071819.1 3962554 D 273123 CDS YP_071820.1 51597629 2954785 complement(3963147..3964160) 1 NC_006155.1 similar to Yersinia pestis YPO0734 hypothetical protein (98.1% evalue=1.E-179); hypothetical protein 3964160 2954785 YPTB3329 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071820.1 3963147 R 273123 CDS YP_071821.1 51597630 2955580 complement(3964172..3965095) 1 NC_006155.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL 3965095 flgL 2955580 flgL Yersinia pseudotuberculosis IP 32953 flagellar hook-associated protein FlgL YP_071821.1 3964172 R 273123 CDS YP_071822.1 51597631 2955578 complement(3965124..3966485) 1 NC_006155.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 3966485 flgK 2955578 flgK Yersinia pseudotuberculosis IP 32953 flagellar hook-associated protein FlgK YP_071822.1 3965124 R 273123 CDS YP_071823.1 51597632 2955576 complement(3966598..3966891) 1 NC_006155.1 FlgJ; flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain; peptidoglycan hydrolase 3966891 flgJ 2955576 flgJ Yersinia pseudotuberculosis IP 32953 peptidoglycan hydrolase YP_071823.1 3966598 R 273123 CDS YP_071824.1 51597633 2955574 complement(3966901..3968076) 1 NC_006155.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 3968076 flgI 2955574 flgI Yersinia pseudotuberculosis IP 32953 flagellar basal body P-ring biosynthesis protein FlgA YP_071824.1 3966901 R 273123 CDS YP_071825.1 51597634 2955572 complement(3968090..3968755) 1 NC_006155.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; flagellar basal body L-ring protein 3968755 flgH 2955572 flgH Yersinia pseudotuberculosis IP 32953 flagellar basal body L-ring protein YP_071825.1 3968090 R 273123 CDS YP_071826.1 51597635 2955571 complement(3968790..3969575) 1 NC_006155.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 3969575 flgG 2955571 flgG Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgG YP_071826.1 3968790 R 273123 CDS YP_071827.1 51597636 2955568 complement(3969643..3970374) 1 NC_006155.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 3970374 flgF 2955568 flgF Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgF YP_071827.1 3969643 R 273123 CDS YP_071828.1 51597637 2955567 complement(3970374..3971618) 1 NC_006155.1 the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE 3971618 flgE 2955567 flgE Yersinia pseudotuberculosis IP 32953 flagellar hook protein FlgE YP_071828.1 3970374 R 273123 CDS YP_071829.1 51597638 2955565 complement(3971673..3972329) 1 NC_006155.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production; flagellar basal body rod modification protein 3972329 flgD 2955565 flgD Yersinia pseudotuberculosis IP 32953 flagellar basal body rod modification protein YP_071829.1 3971673 R 273123 CDS YP_071830.1 51597639 2955563 complement(3972332..3972757) 1 NC_006155.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgC 3972757 flgC 2955563 flgC Yersinia pseudotuberculosis IP 32953 flagellar basal body rod protein FlgC YP_071830.1 3972332 R 273123 CDS YP_071831.1 51597640 2955561 complement(3972760..3973206) 1 NC_006155.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Yersinia has 2 copies of flgB and other flagellar genes; flagellar basal-body rod protein FlgB 3973206 flgB 2955561 flgB Yersinia pseudotuberculosis IP 32953 flagellar basal-body rod protein FlgB YP_071831.1 3972760 R 273123 CDS YP_071832.2 161760560 2955559 3973399..3974112 1 NC_006155.1 required for the assembly of the flagellar basal body P-ring; the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella; flagellar basal body P-ring biosynthesis protein FlgA 3974112 flgA 2955559 flgA Yersinia pseudotuberculosis IP 32953 flagellar basal body P-ring biosynthesis protein FlgA YP_071832.2 3973399 D 273123 CDS YP_071833.1 51597642 2954786 3974322..3974588 1 NC_006155.1 similar to Yersinia pestis YPO0720 flagellar regulatory protein (100% evalue=1.E-43); flagellar regulatory protein 3974588 2954786 YPTB3342 Yersinia pseudotuberculosis IP 32953 flagellar regulatory protein YP_071833.1 3974322 D 273123 CDS YP_071834.1 51597643 2954787 3974595..3975020 1 NC_006155.1 similar to Yersinia pestis YPO0719 hypothetical protein (99% evalue=2.E-56); hypothetical protein 3975020 2954787 YPTB3343 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071834.1 3974595 D 273123 CDS YP_071835.1 51597644 2954788 complement(3975362..3975799) 1 NC_006155.1 similar to Yersinia pestis YPO0718 hypothetical protein (86.6% evalue=5.E-61); hypothetical protein 3975799 2954788 YPTB3344 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071835.1 3975362 R 273123 CDS YP_071836.1 51597645 2955605 complement(3975803..3977143) 1 NC_006155.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3977143 fliI 2955605 fliI Yersinia pseudotuberculosis IP 32953 flagellum-specific ATP synthase YP_071836.1 3975803 R 273123 CDS YP_071837.1 51597646 2955603 complement(3977136..3977852) 1 NC_006155.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 3977852 fliH 2955603 fliH Yersinia pseudotuberculosis IP 32953 flagellar assembly protein H YP_071837.1 3977136 R 273123 CDS YP_071838.1 51597647 2955601 complement(3977857..3978900) 1 NC_006155.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 3978900 fliG 2955601 fliG Yersinia pseudotuberculosis IP 32953 flagellar motor switch protein G YP_071838.1 3977857 R 273123 CDS YP_071839.1 51597648 2955599 complement(3978872..3980512) 1 NC_006155.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein 3980512 fliF 2955599 fliF Yersinia pseudotuberculosis IP 32953 flagellar MS-ring protein YP_071839.1 3978872 R 273123 CDS YP_071840.1 51597649 2955597 complement(3980522..3980902) 1 NC_006155.1 similar to Yersinia pestis YPO0713 fliE; flagellar hook-basal body complex protein (99.2% evalue=1.E-63); Pseudomonas aeruginosa PA1100 fliE; flagellar hook-basal body complex protein FliE (43.6% evalue=2.E-11); flagellar hook-basal body complex protein 3980902 fliE 2955597 fliE Yersinia pseudotuberculosis IP 32953 flagellar hook-basal body complex protein YP_071840.1 3980522 R 273123 CDS YP_071841.1 51597650 2955557 complement(3980919..3981947) 1 NC_006155.1 similar to Yersinia pestis YPO0712 fleR, flbD; sigma-54 transcriptional regulatory protein (99.7% evalue=0); Pseudomonas aeruginosa PA1099 fleR; two-component response regulator (49.5% evalue=8.E-86); Fis family transcriptional regulator 3981947 fleR 2955557 fleR Yersinia pseudotuberculosis IP 32953 Fis family transcriptional regulator YP_071841.1 3980919 R 273123 CDS YP_071842.1 51597651 2955610 3982458..3983369 1 NC_006155.1 similar to Yersinia pestis YPO0711 fliM; flagellar motor switch protein (99% evalue=1.E-170); flagellar motor switch protein 3983369 fliM 2955610 fliM Yersinia pseudotuberculosis IP 32953 flagellar motor switch protein YP_071842.1 3982458 D 273123 CDS YP_071843.1 51597652 2955613 3983362..3983775 1 NC_006155.1 similar to Yersinia pestis YPO0710 fliN, mopA; flagellar switch protein (100% evalue=6.E-71); Vibrio cholerae VC2125 flagellar motor switch protein FliN (38.3% evalue=2.E-18); flagellar switch protein 3983775 fliN 2955613 fliN Yersinia pseudotuberculosis IP 32953 flagellar switch protein YP_071843.1 3983362 D 273123 CDS YP_071844.1 51597653 2955615 3983772..3984542 1 NC_006155.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3984542 fliP 2955615 fliP Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FliP YP_071844.1 3983772 D 273123 CDS YP_071845.1 51597654 2955617 3984544..3984816 1 NC_006155.1 similar to Yersinia pestis YPO0708 fliQ; flagellar assembly protein (100% evalue=4.E-42); Vibrio cholerae VC2122 flagellar biosynthetic protein FliQ (50% evalue=1.E-17); flagellar assembly/export protein, fliQ 3984816 fliQ 2955617 fliQ Yersinia pseudotuberculosis IP 32953 flagellar assembly/export protein, fliQ YP_071845.1 3984544 D 273123 CDS YP_071846.1 51597655 2955620 3984823..3985596 1 NC_006155.1 similar to Yersinia pestis YPO0707 fliR, mopE; flagellar assembly protein (100% evalue=1.E-142); Pseudomonas aeruginosa PA1448 fliR; flagellar biosynthetic protein FliR (37.8% evalue=3.E-37); flagellar assembly/export protein, fliR 3985596 fliR 2955620 fliR Yersinia pseudotuberculosis IP 32953 flagellar assembly/export protein, fliR YP_071846.1 3984823 D 273123 CDS YP_071847.1 51597656 2955587 3985596..3986729 1 NC_006155.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3986729 flhB 2955587 flhB Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FlhB YP_071847.1 3985596 D 273123 CDS YP_071848.1 51597657 2955585 3986716..3988812 1 NC_006155.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3988812 flhA 2955585 flhA Yersinia pseudotuberculosis IP 32953 flagellar biosynthesis protein FlhA YP_071848.1 3986716 D 273123 CDS YP_071849.1 51597658 2954789 3989015..3989584 1 NC_006155.1 similar to Yersinia pestis YPO0703 lipoprotein (99.4% evalue=1.E-106); lipoprotein 3989584 2954789 YPTB3358 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071849.1 3989015 D 273123 CDS YP_071850.1 51597659 2955544 3991527..3992606 1 NC_006155.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 3992606 fepB 2955544 fepB Yersinia pseudotuberculosis IP 32953 iron-enterobactin transporter periplasmic binding protein YP_071850.1 3991527 D 273123 CDS YP_071851.1 51597660 2954791 complement(3992818..3993921) 1 NC_006155.1 similar to Yersinia pestis YPO0700 Fimbrial protein (96.4% evalue=0); fimbrial protein 3993921 2954791 YPTB3361 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_071851.1 3992818 R 273123 CDS YP_071852.1 51597661 2954792 complement(3993946..3994665) 1 NC_006155.1 similar to Yersinia pestis YPO0699 fimbrial chaperone protein (100% evalue=1.E-132); Escherichia coli JW2333 yfcS; Hypothetical fimbrial chaperone (43.7% evalue=6.E-57); fimbrial chaperone protein 3994665 2954792 YPTB3362 Yersinia pseudotuberculosis IP 32953 fimbrial chaperone protein YP_071852.1 3993946 R 273123 CDS YP_071853.1 51597662 2954793 complement(3994683..3997163) 1 NC_006155.1 similar to Yersinia pestis YPO0698 outer membrane usher protein (99.7% evalue=0); Salmonella typhimurium STM0196 stfC; fimbrial outer membrane usher (44% evalue=0); outer membrane fimbrial usher porin 3997163 2954793 YPTB3363 Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_071853.1 3994683 R 273123 CDS YP_071854.1 51597663 2956614 complement(3997470..3998000) 1 NC_006155.1 similar to Yersinia pestis YPO4044 fimbrial protein (34.2% evalue=3.E-19); fimbrial protein 3998000 smfA 2956614 smfA Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_071854.1 3997470 R 273123 CDS YP_071855.1 51597664 2955331 3999120..4000535 1 NC_006155.1 similar to Pseudomonas aeruginosa PA2300 chiC; chitinase (51.7% evalue=1.E-131); Lactococcus lactis L9964 chiA; chitinase (46.2% evalue=1.E-101); chitinase 4000535 chiC 2955331 chiC Yersinia pseudotuberculosis IP 32953 chitinase YP_071855.1 3999120 D 273123 CDS YP_071856.1 51597665 2954794 4000604..4002013 1 NC_006155.1 similar to Listeria monocytogenes lmo2467 similar to chitinase and chitin binding protein (32.8% evalue=3.E-54); Listeria innocua lin2611 similar to chitinase and chitin binding protein (33.4% evalue=5.E-50); hypothetical protein 4002013 2954794 YPTB3366 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071856.1 4000604 D 273123 CDS YP_071857.1 51597666 2954796 4003499..4004086 1 NC_006155.1 similar to Salmonella typhi STY0374 possible transmembrane regulator (32% evalue=1.E-10); Salmonella typhimurium STM0341 inner membrane protein (32% evalue=3.E-11); hypothetical protein 4004086 2954796 YPTB3368 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071857.1 4003499 D 273123 CDS YP_071858.1 51597667 2954797 4004309..4004506 1 NC_006155.1 hypothetical protein 4004506 2954797 YPTB3369 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071858.1 4004309 D 273123 CDS YP_071859.1 51597668 2954798 4004573..4004995 1 NC_006155.1 similar to Yersinia pestis YPO0695 membrane protein (94.2% evalue=3.E-68); Pasteurella multocida PM0854 hypothetical A. actinmycetemcomitans (34.5% evalue=1.E-22); hypothetical protein 4004995 2954798 YPTB3370 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071859.1 4004573 D 273123 CDS YP_071860.1 51597669 2954799 4005047..4005943 1 NC_006155.1 similar to Yersinia pestis YPO0694 membrane protein (92.9% evalue=1.E-152); Pasteurella multocida PM0853 hypothetical A. actinmycetemcomitans (27.1% evalue=2.E-19); hypothetical protein 4005943 2954799 YPTB3371 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071860.1 4005047 D 273123 CDS YP_071861.1 51597670 2956404 4005940..4007259 1 NC_006155.1 similar to Pasteurella multocida PM0852 rcpA; rough colony protein A (39.6% evalue=8.E-92); Mesorhizobium loti mlr6335 type II secretion system protein (29.4% evalue=2.E-43); outer membrane secretin family protein 4007259 rcpA 2956404 rcpA Yersinia pseudotuberculosis IP 32953 outer membrane secretin family protein YP_071861.1 4005940 D 273123 CDS YP_071862.1 51597671 2954800 4007256..4007546 1 NC_006155.1 not considered as relevant in Y.pestis C0-92 annotation.; hypothetical protein 4007546 2954800 YPTB3373 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071862.1 4007256 D 273123 CDS YP_071863.1 51597672 2954801 4007557..4008684 1 NC_006155.1 similar to Yersinia pestis YPO0691 hypothetical protein (100% evalue=0); Pasteurella multocida PM0850 unknown (35.2% evalue=2.E-58); hypothetical protein 4008684 2954801 YPTB3374 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071863.1 4007557 D 273123 CDS YP_071864.1 51597673 2954802 4008696..4009982 1 NC_006155.1 similar to Yersinia pestis YPO0690 type II secretion protein (99.5% evalue=0); Pasteurella multocida PM0849 tadA; TadA, nonspecific tight adherence protein (63.2% evalue=1.E-152); type IV secretion ATPase 4009982 2954802 YPTB3375 Yersinia pseudotuberculosis IP 32953 type IV secretion ATPase YP_071864.1 4008696 D 273123 CDS YP_071865.1 51597674 2954803 4009979..4010854 1 NC_006155.1 similar to Yersinia pestis YPO0689 membrane protein (100% evalue=1.E-162); Pasteurella multocida PM0848 tadB; TadB, nonspecific tight adherence protein (35.5% evalue=8.E-49); hypothetical protein 4010854 2954803 YPTB3376 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071865.1 4009979 D 273123 CDS YP_071866.1 51597675 2954804 4010851..4011684 1 NC_006155.1 similar to Yersinia pestis YPO0688 exported protein (99.6% evalue=1.E-148); Pasteurella multocida PM0847 tadC; TadC, nonspecific tight adherence protein (30.9% evalue=4.E-38); hypothetical protein 4011684 2954804 YPTB3377 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071866.1 4010851 D 273123 CDS YP_071867.1 51597676 2954805 4011668..4012438 1 NC_006155.1 similar to Yersinia pestis YPO0687 conserved hypothetical protein (99.1% evalue=1.E-131); Pasteurella multocida PM0846 tadD; TadD, nonspecific tight adherence protein (40.3% evalue=4.E-44); hypothetical protein 4012438 2954805 YPTB3378 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071867.1 4011668 D 273123 CDS YP_071868.1 51597677 2954806 4012435..4012908 1 NC_006155.1 similar to Yersinia pestis YPO0686 membrane protein (99.3% evalue=8.E-83); hypothetical protein 4012908 2954806 YPTB3379 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071868.1 4012435 D 273123 CDS YP_071869.1 51597678 2954807 4012892..4013464 1 NC_006155.1 similar to Yersinia pestis YPO0685 conserved hypothetical protein (99.4% evalue=5.E-91); Pasteurella multocida PM0844 tadF; TadF, nonspecific tight adherence protein (28.6% evalue=1.E-13); hypothetical protein 4013464 2954807 YPTB3380 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071869.1 4012892 D 273123 CDS YP_071870.1 51597679 2954808 4013489..4015045 1 NC_006155.1 similar to Yersinia pestis YPO0684 membrane protein (99.6% evalue=0); Pasteurella multocida PM0843 tadG; TadG, nonspecific tight adherence protein (22.8% evalue=6.E-19); hypothetical protein 4015045 2954808 YPTB3381 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071870.1 4013489 D 273123 CDS YP_071871.1 51597680 2954809 complement(4015142..4015567) 1 NC_006155.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD 4015567 2954809 YPTB3382 Yersinia pseudotuberculosis IP 32953 biopolymer transport protein ExbD YP_071871.1 4015142 R 273123 CDS YP_071872.1 51597681 2954810 complement(4015577..4016614) 1 NC_006155.1 similar to Yersinia pestis YPO0682 MotA/TolQ/ExbB proton channel family protein (99.5% evalue=1.E-127); Escherichia coli Z4359 exbB; uptake of enterochelin; tonB-dependent uptake of B colicins (71.1% evalue=3.E-88); MotA/TolQ/ExbB proton channel family protein 4016614 2954810 YPTB3383 Yersinia pseudotuberculosis IP 32953 MotA/TolQ/ExbB proton channel family protein YP_071872.1 4015577 R 273123 CDS YP_071873.1 51597682 2956022 4017093..4018304 1 NC_006155.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4018304 metC 2956022 metC Yersinia pseudotuberculosis IP 32953 cystathionine beta-lyase YP_071873.1 4017093 D 273123 CDS YP_071874.1 51597683 2954811 4018497..4019159 1 NC_006155.1 similar to Yersinia pestis YPO0680 DedA-family membrane protein (100% evalue=1.E-122); Escherichia coli ECs3893 hypothetical protein (70.2% evalue=5.E-83); DedA family membrane protein 4019159 2954811 YPTB3385 Yersinia pseudotuberculosis IP 32953 DedA family membrane protein YP_071874.1 4018497 D 273123 CDS YP_071875.1 51597684 2954812 complement(4019251..4020144) 1 NC_006155.1 similar to Yersinia pestis YPO0679 AraC-family regulatory protein (100% evalue=1.E-168); Salmonella typhimurium STM3163 yqhC; transcriptional regulator (AraC/XylS family) (61.5% evalue=1.E-101); AraC family transcriptional regulator 4020144 2954812 YPTB3386 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_071875.1 4019251 R 273123 CDS YP_071876.1 51597685 2954813 4020542..4021699 1 NC_006155.1 similar to Yersinia pestis YPO0678 iron-containing alcohol dehydrogenase (100% evalue=0); Escherichia coli b3011 yqhD; hypothetical oxidoreductase in metC-sufI intergenic region (77.2% evalue=1.E-172); iron-containing alcohol dehydrogenase 4021699 2954813 YPTB3387 Yersinia pseudotuberculosis IP 32953 iron-containing alcohol dehydrogenase YP_071876.1 4020542 D 273123 CDS YP_071877.1 51597686 2954814 4022118..4022951 1 NC_006155.1 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4022951 dkgA 2954814 dkgA Yersinia pseudotuberculosis IP 32953 2,5-diketo-D-gluconate reductase A YP_071877.1 4022118 D 273123 CDS YP_071878.1 51597687 2954815 complement(4022973..4025336) 1 NC_006155.1 similar to Escherichia coli ECs3900 hypothetical protein (82.8% evalue=0); Escherichia coli Z4370 hypothetical protein (82.7% evalue=0); hypothetical protein 4025336 2954815 YPTB3389 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071878.1 4022973 R 273123 CDS YP_071879.1 51597688 2956649 complement(4025644..4027068) 1 NC_006155.1 similar to Yersinia pestis YPO0673 sufI; cell division protein (100% evalue=0); Escherichia coli ECs3901 suppressor of ftsI (74.3% evalue=0); repressor protein for FtsI 4027068 sufI 2956649 sufI Yersinia pseudotuberculosis IP 32953 repressor protein for FtsI YP_071879.1 4025644 R 273123 CDS YP_071880.1 51597689 2956278 complement(4027247..4027978) 1 NC_006155.1 similar to Yersinia pestis YPO0672 plsC, parF; acyltransferase (100% evalue=1.E-139); Escherichia coli ECs3902 1-acyl-sn-glycerol-3-phosphate acyltransferase (72.1% evalue=1.E-101); acyltransferase 4027978 plsC 2956278 plsC Yersinia pseudotuberculosis IP 32953 acyltransferase YP_071880.1 4027247 R 273123 CDS YP_071881.1 51597690 2956212 complement(4028249..4030522) 1 NC_006155.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4030522 parC 2956212 parC Yersinia pseudotuberculosis IP 32953 DNA topoisomerase IV subunit A YP_071881.1 4028249 R 273123 CDS YP_071882.1 51597691 2956004 4030826..4031410 1 NC_006155.1 similar to Yersinia pestis YPO0670 mdaB, mda66; modulator of drug activity (100% evalue=1.E-113); Salmonella typhimurium STM3179 mdaB; NADPH specific quinone oxidoreductase (drug modulator) (69.4% evalue=1.E-78); modulator of drug activity 4031410 mdaB 2956004 mdaB Yersinia pseudotuberculosis IP 32953 modulator of drug activity YP_071882.1 4030826 D 273123 CDS YP_071883.1 51597692 2954816 complement(4031468..4032379) 1 NC_006155.1 similar to Yersinia pestis YPO0669 crgA; LysR-family regulatory protein (99.6% evalue=1.E-166); Ralstonia solanacearum RS04599 probable transcription regulator protein (66.5% evalue=1.E-101); LysR family transcriptional regulator 4032379 2954816 YPTB3394 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071883.1 4031468 R 273123 CDS YP_071884.1 51597693 2956213 complement(4032383..4034278) 1 NC_006155.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4034278 parE 2956213 parE Yersinia pseudotuberculosis IP 32953 DNA topoisomerase IV subunit B YP_071884.1 4032383 R 273123 CDS YP_071885.1 51597694 2954817 complement(4034380..4034961) 1 NC_006155.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase 4034961 2954817 YPTB3396 Yersinia pseudotuberculosis IP 32953 esterase YP_071885.1 4034380 R 273123 CDS YP_071886.1 51597695 2955862 complement(4034961..4035860) 1 NC_006155.1 similar to Yersinia pestis YPO0666 icc; Icc protein homologue (98.9% evalue=1.E-163); Salmonella typhi STY3361 icc; conserved hypothetical protein (71.6% evalue=1.E-116); cyclic 3',5'-adenosine monophosphate phosphodiesterase 4035860 icc 2955862 icc Yersinia pseudotuberculosis IP 32953 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_071886.1 4034961 R 273123 CDS YP_071887.1 51597696 2954818 complement(4035869..4036294) 1 NC_006155.1 similar to Yersinia pestis YPO0665 conserved hypothetical protein (100% evalue=3.E-78); Escherichia coli JW3001 yqiB; Hypothetical protein (ORF2) (f140) (79.7% evalue=6.E-63); hypothetical protein 4036294 2954818 YPTB3398 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071887.1 4035869 R 273123 CDS YP_071888.1 51597697 2954819 complement(4036328..4036960) 1 NC_006155.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase 4036960 nudF 2954819 nudF Yersinia pseudotuberculosis IP 32953 ADP-ribose pyrophosphatase YP_071888.1 4036328 R 273123 CDS YP_071889.1 51597698 2955769 4037356..4038750 1 NC_006155.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4038750 tolC 2955769 tolC Yersinia pseudotuberculosis IP 32953 outer membrane channel protein YP_071889.1 4037356 D 273123 CDS YP_071890.1 51597699 2954820 4039051..4039737 1 NC_006155.1 similar to Yersinia pestis YPO0661 exported protein (100% evalue=1.E-127); Salmonella typhimurium STM3187 ygiB; inner membrane protein (75.2% evalue=1.E-92); hypothetical protein 4039737 2954820 YPTB3401 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071890.1 4039051 D 273123 CDS YP_071891.1 51597700 2954821 4039747..4040907 1 NC_006155.1 similar to Yersinia pestis YPO0660 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM3188 ygiC; glutathionylspermidine synthase (78.4% evalue=0); hypothetical protein 4040907 2954821 YPTB3402 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071891.1 4039747 D 273123 CDS YP_071892.1 51597701 2954822 complement(4041068..4041850) 1 NC_006155.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 4041850 2954822 YPTB3403 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071892.1 4041068 R 273123 CDS YP_071893.1 51597702 2956451 complement(4042309..4042962) 1 NC_006155.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 4042962 ribB 2956451 ribB Yersinia pseudotuberculosis IP 32953 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_071893.1 4042309 R 273123 CDS YP_071894.1 51597703 2954823 4043532..4043813 1 NC_006155.1 similar to Yersinia pestis YPO0656 conserved hypothetical protein (100% evalue=4.E-46); Escherichia coli Z4400 hypothetical protein (89% evalue=2.E-33); hypothetical protein 4043813 2954823 YPTB3405 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071894.1 4043532 D 273123 CDS YP_071895.1 51597704 2955246 complement(4044138..4045388) 1 NC_006155.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; hypothetical protein 4045388 asoB 2955246 asoB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071895.1 4044138 R 273123 CDS YP_071896.1 51597705 2956428 complement(4045425..4046855) 1 NC_006155.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 4046855 rfaE 2956428 rfaE Yersinia pseudotuberculosis IP 32953 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_071896.1 4045425 R 273123 CDS YP_071897.1 51597706 2955698 complement(4046990..4049845) 1 NC_006155.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4049845 glnE 2955698 glnE Yersinia pseudotuberculosis IP 32953 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_071897.1 4046990 R 273123 CDS YP_071898.1 51597707 2954824 complement(4049993..4051300) 1 NC_006155.1 similar to Yersinia pestis YPO0652 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY3381 conserved hypothetical protein (49.8% evalue=1.E-115); hypothetical protein 4051300 2954824 YPTB3409 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071898.1 4049993 R 273123 CDS YP_071899.1 51597708 2954825 4051604..4052224 1 NC_006155.1 similar to Yersinia pestis YPO0651 exported protein (99.5% evalue=1.E-114); Escherichia coli ECs3938 hypothetical protein (71.8% evalue=8.E-83); signal transduction protein 4052224 2954825 YPTB3410 Yersinia pseudotuberculosis IP 32953 signal transduction protein YP_071899.1 4051604 D 273123 CDS YP_071900.1 51597709 2955305 4052402..4053640 1 NC_006155.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 4053640 cca 2955305 cca Yersinia pseudotuberculosis IP 32953 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_071900.1 4052402 D 273123 CDS YP_071901.1 51597710 2955268 complement(4053876..4054694) 1 NC_006155.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 4054694 uppP 2955268 uppP Yersinia pseudotuberculosis IP 32953 undecaprenyl pyrophosphate phosphatase YP_071901.1 4053876 R 273123 CDS YP_071902.1 51597711 2955631 complement(4054968..4055327) 1 NC_006155.1 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 4055327 folB 2955631 folB Yersinia pseudotuberculosis IP 32953 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YP_071902.1 4054968 R 273123 CDS YP_071903.1 51597712 2954826 4055435..4056085 1 NC_006155.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 4056085 2954826 YPTB3414 Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate acyltransferase PlsY YP_071903.1 4055435 D 273123 CDS YP_071904.1 51597713 2955677 complement(4056331..4057344) 1 NC_006155.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 4057344 gcp 2955677 gcp Yersinia pseudotuberculosis IP 32953 DNA-binding/iron metalloprotein/AP endonuclease YP_071904.1 4056331 R 273123 CDS YP_071905.1 51597714 2956548 4057757..4057972 1 NC_006155.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4057972 rpsU 2956548 rpsU Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S21 YP_071905.1 4057757 D 273123 CDS YP_071906.1 51597715 2955473 4058108..4059856 1 NC_006155.1 synthesizes RNA primers at the replication forks; DNA primase 4059856 dnaG 2955473 dnaG Yersinia pseudotuberculosis IP 32953 DNA primase YP_071906.1 4058108 D 273123 CDS YP_071907.1 51597716 2956523 4060014..4061852 1 NC_006155.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 4061852 rpoD 2956523 rpoD Yersinia pseudotuberculosis IP 32953 RNA polymerase sigma factor RpoD YP_071907.1 4060014 D 273123 CDS YP_071908.1 51597717 2954827 complement(4062370..4062972) 1 NC_006155.1 similar to Yersinia pestis YPO0642 hypothetical protein (97.4% evalue=4.E-16); hypothetical protein 4062972 2954827 YPTB3419 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071908.1 4062370 R 273123 CDS YP_071909.1 51597718 2954828 complement(4062989..4063444) 1 NC_006155.1 similar to Yersinia pestis YPO0641 hypothetical protein (100% evalue=3.E-78); hypothetical protein 4063444 2954828 YPTB3420 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071909.1 4062989 R 273123 CDS YP_071910.1 51597719 2954829 complement(4063471..4063941) 1 NC_006155.1 similar to Yersinia pestis YPO0641 hypothetical protein (49.2% evalue=9.E-30); hypothetical protein 4063941 2954829 YPTB3421 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071910.1 4063471 R 273123 CDS YP_071911.1 51597720 2954830 complement(4063950..4065326) 1 NC_006155.1 similar to Yersinia pestis YPO1258 conserved hypothetical protein (52.5% evalue=1.E-113); hypothetical protein 4065326 2954830 YPTB3422 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071911.1 4063950 R 273123 CDS YP_071912.1 51597721 2954831 complement(4067382..4068338) 1 NC_006155.1 similar to Yersinia pestis YPO0631 LysR-family regulatory protein (99% evalue=1.E-178); Pseudomonas aeruginosa PA4174 probable transcriptional regulator (42.6% evalue=2.E-63); LysR family transcriptional regulator 4068338 2954831 YPTB3424 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071912.1 4067382 R 273123 CDS YP_071913.1 51597722 2954832 4068500..4069216 1 NC_006155.1 similar to Yersinia pestis YPO0630 conserved hypothetical protein (99.5% evalue=1.E-139); Pseudomonas aeruginosa PA0859 hypothetical protein (36.5% evalue=5.E-29); hypothetical protein 4069216 2954832 YPTB3425 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071913.1 4068500 D 273123 CDS YP_071914.1 51597723 2954833 4069476..4069778 1 NC_006155.1 similar to Yersinia pestis YPO0629 conserved hypothetical protein (100% evalue=2.E-53); Escherichia coli JW1657 hypothetical protein (50% evalue=2.E-24); hypothetical protein 4069778 2954833 YPTB3426 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071914.1 4069476 D 273123 CDS YP_071915.1 51597724 2954834 complement(4069993..4070397) 1 NC_006155.1 similar to Yersinia pestis YPO0628 translational inhibitor protein (100% evalue=8.E-72); Sinorhizobium meliloti SMc01714 hypothetical transmembrane protein (33% evalue=2.E-12); translational inhibitor protein 4070397 2954834 YPTB3427 Yersinia pseudotuberculosis IP 32953 translational inhibitor protein YP_071915.1 4069993 R 273123 CDS YP_071916.1 51597725 2954835 complement(4070682..4071062) 1 NC_006155.1 similar to Yersinia pestis YPO0627 translational inhibitor protein (100% evalue=8.E-66); P. horikoshii PH0854 hypothetical protein (52.4% evalue=9.E-31); translational inhibitor protein 4071062 2954835 YPTB3428 Yersinia pseudotuberculosis IP 32953 translational inhibitor protein YP_071916.1 4070682 R 273123 CDS YP_071917.1 51597726 2954836 complement(4071073..4071705) 1 NC_006155.1 similar to Yersinia pestis YPO0626 conserved hypothetical protein (99.4% evalue=2.E-96); Salmonella typhi STY4219 DNA-binding protein (33.9% evalue=2.E-28); hypothetical protein 4071705 2954836 YPTB3429 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071917.1 4071073 R 273123 CDS YP_071918.1 51597727 2954837 complement(4071839..4072285) 1 NC_006155.1 similar to Yersinia pestis YPO0625 hypothetical protein (100% evalue=2.E-81); Mesorhizobium loti mlr1698 unknown protein (31.9% evalue=1.E-14); hypothetical protein 4072285 2954837 YPTB3430 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071918.1 4071839 R 273123 CDS YP_071919.1 51597728 2954838 complement(4072289..4073740) 1 NC_006155.1 similar to Yersinia pestis YPO0624 membrane protein (99.7% evalue=0); Halobacterium VNG0436G nhaC1; Na+/H+ antiporter (26.5% evalue=2.E-41); NhaC family Na+/H+ antiporter 4073740 2954838 YPTB3431 Yersinia pseudotuberculosis IP 32953 NhaC family Na+/H+ antiporter YP_071919.1 4072289 R 273123 CDS YP_071920.1 51597729 2954839 complement(4073733..4074965) 1 NC_006155.1 similar to Yersinia pestis YPO0623 aminotransferase (100% evalue=0); P. abyssi PAB0525 aspC; aspartate aminotransferase (33% evalue=9.E-55); aminotransferase 4074965 2954839 YPTB3432 Yersinia pseudotuberculosis IP 32953 aminotransferase YP_071920.1 4073733 R 273123 CDS YP_071921.1 51597730 2954840 4075436..4075543 1 NC_006155.1 similar to Yersinia pestis YPO0622 hypothetical protein, 100% identical.; hypothetical protein 4075543 2954840 YPTB3433 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071921.1 4075436 D 273123 CDS YP_071922.1 51597731 2954841 4075716..4075916 1 NC_006155.1 similar to Yersinia pestis YPO0621 hypothetical protein, 100% identical.; hypothetical protein 4075916 2954841 YPTB3434 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071922.1 4075716 D 273123 CDS YP_071923.1 51597732 2954842 4075913..4076248 1 NC_006155.1 similar to Yersinia pestis YPO0620 exported protein (100% evalue=7.E-58); hypothetical protein 4076248 2954842 YPTB3435 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071923.1 4075913 D 273123 CDS YP_071924.1 51597733 2954843 4076258..4077307 1 NC_006155.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN 4077307 2954843 YPTB3436 Yersinia pseudotuberculosis IP 32953 multidrug resistance protein MdtN YP_071924.1 4076258 D 273123 CDS YP_071925.1 51597734 2954844 4077291..4079192 1 NC_006155.1 similar to Yersinia pestis YPO0618 membrane protein (99.4% evalue=0); Escherichia coli JW4042 yjcQ; Hypothetical protein (27.9% evalue=5.E-45); PET family efflux transporter 4079192 2954844 YPTB3437 Yersinia pseudotuberculosis IP 32953 PET family efflux transporter YP_071925.1 4077291 D 273123 CDS YP_071926.1 51597735 2954845 4079197..4080723 1 NC_006155.1 similar to Yersinia pestis YPO0617 membrane protein (100% evalue=0); Ralstonia solanacearum RS03674 outer membrane chanel lipoprotein (24.1% evalue=2.E-27); Outer membrane factor (OMF) family efflux porin 4080723 2954845 YPTB3438 Yersinia pseudotuberculosis IP 32953 Outer membrane factor (OMF) family efflux porin YP_071926.1 4079197 D 273123 CDS YP_071927.1 51597736 2954846 complement(4080787..4082970) 1 NC_006155.1 similar to Yersinia pestis YPO0616 glycosyl hydrolase (99.7% evalue=0); Pseudomonas aeruginosa PA1726 bglX; periplasmic beta-glucosidase (39.3% evalue=1.E-140); glycosyl hydrolase 4082970 2954846 YPTB3439 Yersinia pseudotuberculosis IP 32953 glycosyl hydrolase YP_071927.1 4080787 R 273123 CDS YP_071928.1 51597737 2954847 complement(4083021..4083536) 1 NC_006155.1 similar to Yersinia pestis YPO0615 exported protein (98.1% evalue=2.E-86); hypothetical protein 4083536 2954847 YPTB3440 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071928.1 4083021 R 273123 CDS YP_071929.1 51597738 2954848 complement(4083533..4084351) 1 NC_006155.1 similar to Yersinia pestis YPO0614 permease (99.6% evalue=1.E-151); Agrobacterium tumefaciens AGR_L_3392 transport system inner membrane protein (37.2% evalue=1.E-49); sugar ABC transporter permease 4084351 2954848 YPTB3441 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071929.1 4083533 R 273123 CDS YP_071930.1 51597739 2954849 complement(4084351..4085232) 1 NC_006155.1 similar to Yersinia pestis YPO0613 permease (99.3% evalue=1.E-167); B. halodurans BH0902 araP; L-arabinose transport system permease (34.8% evalue=9.E-42); sugar ABC transporter permease 4085232 2954849 YPTB3442 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_071930.1 4084351 R 273123 CDS YP_071931.1 51597740 2954850 complement(4085286..4086530) 1 NC_006155.1 similar to Yersinia pestis YPO0612 sugar binding protein (99.7% evalue=0); Mesorhizobium loti mll0854 probable secreted solute-binding protein (24.4% evalue=4.E-13); sugar ABC transporter substrate-binding protein 4086530 2954850 YPTB3443 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_071931.1 4085286 R 273123 CDS YP_071932.1 51597741 2954851 complement(4086607..4087593) 1 NC_006155.1 similar to Yersinia pestis YPO0611 LacI-family regulatory protein (99% evalue=0); Listeria innocua lin1838 similar to transcription regulators (LacI family) (38.3% evalue=4.E-53); LacI-family regulatory protein 4087593 2954851 YPTB3444 Yersinia pseudotuberculosis IP 32953 LacI-family regulatory protein YP_071932.1 4086607 R 273123 CDS YP_071933.1 51597742 2954852 complement(4087702..4091055) 1 NC_006155.1 similar to Yersinia pestis YPO0610 hypothetical protein (99.7% evalue=0); Listeria innocua lin1839 some similarities to cellobiose-phosphorylase (37.2% evalue=0); hypothetical protein 4091055 2954852 YPTB3445 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071933.1 4087702 R 273123 CDS YP_071934.1 51597743 2954853 complement(4091138..4092241) 1 NC_006155.1 similar to Yersinia pestis YPO1720 sugar ABC transporter (53.9% evalue=1.E-111); sugar ABC transporter ATP-binding protein 4092241 2954853 YPTB3446 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATP-binding protein YP_071934.1 4091138 R 273123 CDS YP_071935.1 51597744 2954854 4092579..4093958 1 NC_006155.1 similar to Yersinia pestis YPO0608 membrane protein (99.7% evalue=0); hypothetical protein 4093958 2954854 YPTB3447 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071935.1 4092579 D 273123 CDS YP_071936.1 51597745 2954855 4094060..4095055 1 NC_006155.1 similar to Yersinia pestis YPO0607 exported protein (99.6% evalue=0); hypothetical protein 4095055 2954855 YPTB3448 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071936.1 4094060 D 273123 CDS YP_071937.1 51597746 2956950 4095115..4097400 1 NC_006155.1 similar to Yersinia pestis YPO0606 yapF; autotransporter protein (99% evalue=0); Ralstonia solanacearum RS04855 probable hemagglutinin-related protein (22.6% evalue=7.E-10); autotransporter protein 4097400 yapF 2956950 yapF Yersinia pseudotuberculosis IP 32953 autotransporter protein YP_071937.1 4095115 D 273123 CDS YP_071938.1 51597747 2954857 complement(4098135..4098386) 1 NC_006155.1 hypothetical protein 4098386 2954857 YPTB3451 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071938.1 4098135 R 273123 CDS YP_071939.1 51597748 2954858 complement(4098388..4098705) 1 NC_006155.1 similar to hypothetical protein [Neisseria meningitidis Z2491] pir||B81783, E() =4.00e-03, 40% identity. CDS not found in Y.pestis CO-92.; hypothetical protein 4098705 2954858 YPTB3452 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071939.1 4098388 R 273123 CDS YP_071940.1 51597749 2954859 complement(4098990..4099343) 1 NC_006155.1 hypothetical protein 4099343 2954859 YPTB3453 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071940.1 4098990 R 273123 CDS YP_071941.1 51597750 2954861 complement(4101394..4101894) 1 NC_006155.1 similar to Neisseria meningitidis NMB1489 hypothetical protein (50.2% evalue=4.E-41); Neisseria meningitidis NMB0488 hypothetical protein (52% evalue=1.E-42); hypothetical protein 4101894 2954861 YPTB3455 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071941.1 4101394 R 273123 CDS YP_071942.1 51597751 2954864 complement(4108387..4108776) 1 NC_006155.1 hypothetical protein 4108776 2954864 YPTB3458 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071942.1 4108387 R 273123 CDS YP_071943.1 51597752 2954866 complement(4109942..4120078) 1 NC_006155.1 similar to Yersinia pestis YPO2490 hemolysin (63% evalue=0); adhesin 4120078 2954866 YPTB3460 Yersinia pseudotuberculosis IP 32953 adhesin YP_071943.1 4109942 R 273123 CDS YP_071944.1 51597753 2954867 complement(4120123..4121811) 1 NC_006155.1 similar to Yersinia pestis YPO2491 hemolysin activator protein (81.6% evalue=0); hemolysin activator/exporter 4121811 2954867 YPTB3461 Yersinia pseudotuberculosis IP 32953 hemolysin activator/exporter YP_071944.1 4120123 R 273123 CDS YP_071945.1 51597754 2956682 4122526..4123164 1 NC_006155.1 similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (100% evalue=1.E-116); tellurium resistance protein 4123164 terY 2956682 terY Yersinia pseudotuberculosis IP 32953 tellurium resistance protein YP_071945.1 4122526 D 273123 CDS YP_071946.1 51597755 2956681 4123197..4123838 1 NC_006155.1 similar to Yersinia pestis YPO0596 terX; tellurium resistance protein (100% evalue=1.E-121); tellurium resistance protein 4123838 terX 2956681 terX Yersinia pseudotuberculosis IP 32953 tellurium resistance protein YP_071946.1 4123197 D 273123 CDS YP_071947.1 51597756 2954868 4123777..4124478 1 NC_006155.1 similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (47.2% evalue=3.E-52); TerY-like tellurite resistance protein 4124478 2954868 YPTB3464 Yersinia pseudotuberculosis IP 32953 TerY-like tellurite resistance protein YP_071947.1 4123777 D 273123 CDS YP_071948.1 51597757 2954869 4124580..4125620 1 NC_006155.1 similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (40% evalue=4.E-37); hypothetical protein 4125620 2954869 YPTB3465 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071948.1 4124580 D 273123 CDS YP_071949.1 51597758 2954870 4125620..4127368 1 NC_006155.1 similar to Yersinia pestis YPO0593 hypothetical protein (96.5% evalue=0); hypothetical protein 4127368 2954870 YPTB3466 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071949.1 4125620 D 273123 CDS YP_071950.1 51597759 2954871 4127400..4128899 1 NC_006155.1 similar to Yersinia pestis YPO0592 kinase (99.7% evalue=0); kinase 4128899 2954871 YPTB3467 Yersinia pseudotuberculosis IP 32953 kinase YP_071950.1 4127400 D 273123 CDS YP_071951.1 51597760 2954872 4129290..4129859 1 NC_006155.1 similar to Yersinia pestis YPO0590 hdeD; membrane protein (100% evalue=3.E-99); Escherichia coli b3511 hdeD; hdeD protein (46.2% evalue=1.E-45); acid-resistance membrane protein 4129859 2954872 YPTB3468 Yersinia pseudotuberculosis IP 32953 acid-resistance membrane protein YP_071951.1 4129290 D 273123 CDS YP_071952.1 51597761 2955525 4130072..4132093 1 NC_006155.1 similar to Yersinia pestis YPO0589 fadH, fadH1; 2,4-dienoyl-CoA reductase (99.7% evalue=0); Escherichia coli b3081 fadH; 2,4-dienoyl-CoA reductase (NADPH) (2,4-dienoyl coenzyme A reductase) (72.7% evalue=0); 2,4-dienoyl-CoA reductase 4132093 fadH 2955525 fadH Yersinia pseudotuberculosis IP 32953 2,4-dienoyl-CoA reductase YP_071952.1 4130072 D 273123 CDS YP_071953.1 51597762 2954873 complement(4132209..4133396) 1 NC_006155.1 similar to Yersinia pestis YPO0588 ribosomal RNA small subunit methyltransferase D (100% evalue=0); Escherichia coli ECs3966 ribosomal RNA small subunit methyltransferase D (63.3% evalue=1.E-139); methyltransferase 4133396 2954873 YPTB3470 Yersinia pseudotuberculosis IP 32953 methyltransferase YP_071953.1 4132209 R 273123 CDS YP_071954.1 51597763 2956951 4133871..4136864 1 NC_006155.1 similar to Yersinia pestis YPO1004 yapH; autotransporter protein (43.3% evalue=1.E-79); pertactin family virulence factor/autotransporter 4136864 YapG 2956951 YapG Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_071954.1 4133871 D 273123 CDS YP_071955.1 51597764 2954874 4137120..4137629 1 NC_006155.1 similar to Yersinia pestis YPO0586 conserved hypothetical protein (100% evalue=4.E-96); Salmonella typhimurium STM3221 ygjP; metal-dependent hydrolase (80.5% evalue=4.E-72); hypothetical protein 4137629 2954874 YPTB3472 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071955.1 4137120 D 273123 CDS YP_071956.1 51597765 2954875 4137847..4138842 1 NC_006155.1 similar to Yersinia pestis YPO0585 MocA-family oxidoreductase (100% evalue=0); Escherichia coli ECs3969 hypothetical protein (74.1% evalue=1.E-135); MocA family oxidoreductase 4138842 2954875 YPTB3473 Yersinia pseudotuberculosis IP 32953 MocA family oxidoreductase YP_071956.1 4137847 D 273123 CDS YP_071957.1 51597766 2954876 4139377..4140633 1 NC_006155.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 4140633 2954876 YPTB3474 Yersinia pseudotuberculosis IP 32953 serine/threonine transporter SstT YP_071957.1 4139377 D 273123 CDS YP_071958.1 51597767 2954877 complement(4140700..4141230) 1 NC_006155.1 similar to Yersinia pestis YPO0582 membrane protein (100% evalue=7.E-97); Escherichia coli Z4443 ygjV; orf, hypothetical protein (66% evalue=1.E-66); hypothetical protein 4141230 2954877 YPTB3475 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071958.1 4140700 R 273123 CDS YP_071959.1 51597768 2956886 complement(4141383..4142873) 1 NC_006155.1 similar to Yersinia pestis YPO0581 uxaA; altronate hydrolase (99.1% evalue=0); Escherichia coli Z4444 uxaA; altronate hydrolase (79% evalue=0); altronate hydrolase 4142873 uxaA 2956886 uxaA Yersinia pseudotuberculosis IP 32953 altronate hydrolase YP_071959.1 4141383 R 273123 CDS YP_071960.1 51597769 2956887 complement(4142884..4144335) 1 NC_006155.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 4144335 uxaB 2956887 uxaB Yersinia pseudotuberculosis IP 32953 altronate oxidoreductase YP_071960.1 4142884 R 273123 CDS YP_071961.1 51597770 2956888 complement(4144534..4145943) 1 NC_006155.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 4145943 uxaC 2956888 uxaC Yersinia pseudotuberculosis IP 32953 glucuronate isomerase YP_071961.1 4144534 R 273123 CDS YP_071962.1 51597771 2955512 4146689..4147993 1 NC_006155.1 similar to Yersinia pestis YPO0577 exuT; ExuT transport protein (100% evalue=0); Escherichia coli JW3064 exuT; Hexuronate transporter (84.1% evalue=0); major facilitator superfamily transporter 4147993 exuT 2955512 exuT Yersinia pseudotuberculosis IP 32953 major facilitator superfamily transporter YP_071962.1 4146689 D 273123 CDS YP_071963.1 51597772 2955511 4148256..4149050 1 NC_006155.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 4149050 exuR 2955511 exuR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor ExuR YP_071963.1 4148256 D 273123 CDS YP_071964.1 51597773 2954878 4149251..4149832 1 NC_006155.1 similar to Yersinia pestis YPO0575 lipoprotein (98.9% evalue=1.E-102); lipoprotein 4149832 2954878 YPTB3481 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_071964.1 4149251 D 273123 CDS YP_071965.1 51597774 2957113 4150110..4150808 1 NC_006155.1 similar to Yersinia pestis YPO0574 yqjA; DedA-family membrane protein (100% evalue=1.E-132); Escherichia coli JW3066 yqjA; Hypothetical protein (78.6% evalue=1.E-100); DedA family membrane protein 4150808 yqjA 2957113 yqjA Yersinia pseudotuberculosis IP 32953 DedA family membrane protein YP_071965.1 4150110 D 273123 CDS YP_071966.1 51597775 2954879 4150805..4151194 1 NC_006155.1 similar to Yersinia pestis YPO0573 membrane protein (99.2% evalue=2.E-68); Salmonella typhimurium STM3227 yqjB; outer membrane protein (43.3% evalue=4.E-15); hypothetical protein 4151194 2954879 YPTB3483 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071966.1 4150805 D 273123 CDS YP_071967.1 51597776 2954880 4151420..4151800 1 NC_006155.1 similar to Yersinia pestis YPO0572 exported protein (100% evalue=6.E-66); Salmonella typhimurium STM3228 yqjC; periplasmic protein (44% evalue=1.E-23); hypothetical protein 4151800 2954880 YPTB3484 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071967.1 4151420 D 273123 CDS YP_071968.1 51597777 2954881 4151955..4152260 1 NC_006155.1 similar to Yersinia pestis YPO0570 yqjD; membrane protein (100% evalue=1.E-50); Escherichia coli JW3069 yqjD; Hypothetical protein (69.3% evalue=5.E-33); membrane associated protein 4152260 2954881 YPTB3485 Yersinia pseudotuberculosis IP 32953 membrane associated protein YP_071968.1 4151955 D 273123 CDS YP_071969.1 51597778 2954882 4152263..4152658 1 NC_006155.1 similar to Yersinia pestis YPO0569a conserved hypothetical protein (100% evalue=3.E-66); Salmonella typhimurium STM3230 yqjE; inner membrane protein (64.6% evalue=6.E-40); hypothetical protein 4152658 2954882 YPTB3486 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071969.1 4152263 D 273123 CDS YP_071970.1 51597779 2954883 4152655..4152939 1 NC_006155.1 similar to Yersinia pestis YPO0569 conserved hypothetical protein (97.8% evalue=4.E-47); Salmonella typhi STY3411 conserved hypothetical protein (39.3% evalue=4.E-17); hypothetical protein 4152939 2954883 YPTB3487 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071970.1 4152655 D 273123 CDS YP_071971.1 51597780 2954884 4153243..4153638 1 NC_006155.1 similar to Yersinia pestis YPO0568 membrane protein (99.1% evalue=7.E-65); Escherichia coli b3101 yqjF; hypothetical 17.2 kD protein in exuR-tdcC intergenic region (75.5% evalue=4.E-53); hypothetical protein 4153638 2954884 YPTB3488 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071971.1 4153243 D 273123 CDS YP_071972.1 51597781 2957114 4153724..4154710 1 NC_006155.1 similar to Escherichia coli b3102 yqjG; hypothetical 37.4 kD protein in exuR-tdcC intergenic region (O328) (77% evalue=1.E-151); Escherichia coli JW3073 yqjG; Hypothetical protein (o328) (77% evalue=1.E-151); glutathione S-transferase 4154710 yqjG 2957114 yqjG Yersinia pseudotuberculosis IP 32953 glutathione S-transferase YP_071972.1 4153724 D 273123 CDS YP_071973.1 51597782 2954885 complement(4154841..4155734) 1 NC_006155.1 similar to Yersinia pestis YPO3545 lysR-family transcriptional regulatory protein (99.6% evalue=1.E-164); Escherichia coli b3105 yhaJ; hypothetical transcriptional regulator in exuR-tdcC intergenic region (89.1% evalue=1.E-146); LysR family transcriptional regulator 4155734 2954885 YPTB3490 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_071973.1 4154841 R 273123 CDS YP_071974.1 51597783 2954886 4155996..4156700 1 NC_006155.1 similar to Yersinia pestis YPO3546 conserved hypothetical protein (99.1% evalue=1.E-133); Salmonella typhi STY3416 conserved hypothetical protein (71.7% evalue=7.E-92); hypothetical protein 4156700 2954886 YPTB3491 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071974.1 4155996 D 273123 CDS YP_071975.1 51597784 2954887 complement(4157524..4158423) 1 NC_006155.1 similar to Yersinia pestis YPO3547 tetrapyrrole methylase (100% evalue=1.E-167); Escherichia coli b3146 yraL; hypothetical 31.3 kD protein in agaI-mtr intergenic region (F286) (85.3% evalue=1.E-135); tetrapyrrole methylase family protein 4158423 2954887 YPTB3492 Yersinia pseudotuberculosis IP 32953 tetrapyrrole methylase family protein YP_071975.1 4157524 R 273123 CDS YP_071976.1 51597785 2954888 4158486..4160459 1 NC_006155.1 similar to Yersinia pestis YPO3548 exported protein (99.8% evalue=0); Salmonella typhimurium STM3264 yraM; paral transglycosylase (55.9% evalue=0); hypothetical protein 4160459 2954888 YPTB3493 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071976.1 4158486 D 273123 CDS YP_071977.1 51597786 2954889 4160558..4160911 1 NC_006155.1 similar to Yersinia pestis YPO3549 conserved hypothetical protein (100% evalue=2.E-63); Salmonella typhimurium STM3265 yraN; endonuclease (57.3% evalue=4.E-31); hypothetical protein 4160911 2954889 YPTB3494 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071977.1 4160558 D 273123 CDS YP_071978.1 51597787 2954890 4161182..4161772 1 NC_006155.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; chromosome replication initiator DnaA 4161772 2954890 YPTB3495 Yersinia pseudotuberculosis IP 32953 chromosome replication initiator DnaA YP_071978.1 4161182 D 273123 CDS YP_071979.1 51597788 2954891 4161783..4162358 1 NC_006155.1 similar to Yersinia pestis YPO3551 exported protein (99.4% evalue=2.E-99); Salmonella typhimurium STM3267 yraP; paral periplasmic protein (73.8% evalue=6.E-73); hypothetical protein 4162358 2954891 YPTB3496 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071979.1 4161783 D 273123 CDS YP_071980.1 51597789 2956088 complement(4162565..4163290) 1 NC_006155.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4163290 mtgA 2956088 mtgA Yersinia pseudotuberculosis IP 32953 monofunctional biosynthetic peptidoglycan transglycosylase YP_071980.1 4162565 R 273123 CDS YP_071981.1 51597790 2955501 complement(4163287..4163940) 1 NC_006155.1 similar to Yersinia pestis YPO3553 elbB, elb2; enhancing lycopene biosynthesis protein 2 (100% evalue=1.E-119); Salmonella typhi STY3506 conserved hypothetical protein (65.8% evalue=6.E-79); isoprenoid biosynthesis protein 4163940 elbB 2955501 elbB Yersinia pseudotuberculosis IP 32953 isoprenoid biosynthesis protein YP_071981.1 4163287 R 273123 CDS YP_071982.1 51597791 2954892 complement(4163970..4164164) 1 NC_006155.1 similar to Yersinia pestis YPO3554 hypothetical protein, 97% identical; hypothetical protein 4164164 2954892 YPTB3499 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071982.1 4163970 R 273123 CDS YP_071983.1 51597792 2955211 complement(4164182..4166518) 1 NC_006155.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 4166518 arcB 2955211 arcB Yersinia pseudotuberculosis IP 32953 aerobic respiration control sensor protein ArcB YP_071983.1 4164182 R 273123 CDS YP_071984.1 51597793 2954893 complement(4166802..4167725) 1 NC_006155.1 similar to Yersinia pestis YPO3556 conserved hypothetical protein (100% evalue=1.E-180); Escherichia coli ECs4090 hypothetical protein (78.7% evalue=1.E-140); hypothetical protein 4167725 2954893 YPTB3501 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071984.1 4166802 R 273123 CDS YP_071985.2 161760559 2955717 4168548..4173005 1 NC_006155.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4173005 gltB 2955717 gltB Yersinia pseudotuberculosis IP 32953 glutamate synthase subunit alpha YP_071985.2 4168548 D 273123 CDS YP_071986.1 51597795 2955718 4173015..4174433 1 NC_006155.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4174433 gltD 2955718 gltD Yersinia pseudotuberculosis IP 32953 glutamate synthase subunit beta YP_071986.1 4173015 D 273123 CDS YP_071987.1 51597796 2954894 4175033..4175518 1 NC_006155.1 similar to Yersinia pestis YPO3559 exported protein (98.7% evalue=2.E-83); hypothetical protein 4175518 2954894 YPTB3504 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071987.1 4175033 D 273123 CDS YP_071988.1 51597797 2956636 complement(4175671..4176186) 1 NC_006155.1 similar to Yersinia pestis YPO3560 sspB; stringent starvation protein B (100% evalue=9.E-96); Escherichia coli ECs4101 stringent starvation protein B (72.5% evalue=1.E-67); ClpXP protease specificity-enhancing factor 4176186 sspB 2956636 sspB Yersinia pseudotuberculosis IP 32953 ClpXP protease specificity-enhancing factor YP_071988.1 4175671 R 273123 CDS YP_071989.1 51597798 2956635 complement(4176192..4176833) 1 NC_006155.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 4176833 sspA 2956635 sspA Yersinia pseudotuberculosis IP 32953 stringent starvation protein A YP_071989.1 4176192 R 273123 CDS YP_071990.1 51597799 2956538 complement(4177207..4177599) 1 NC_006155.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 4177599 rpsI 2956538 rpsI Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S9 YP_071990.1 4177207 R 273123 CDS YP_071991.1 51597800 2956497 complement(4177614..4178042) 1 NC_006155.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4178042 rplM 2956497 rplM Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L13 YP_071991.1 4177614 R 273123 CDS YP_071992.1 51597801 2954895 complement(4178356..4179483) 1 NC_006155.1 similar to Yersinia pestis YPO3564 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY3526 ATP/GTP-binding protein (66.4% evalue=1.E-139); hypothetical protein 4179483 2954895 YPTB3509 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071992.1 4178356 R 273123 CDS YP_071993.1 51597802 2954896 4179707..4180111 1 NC_006155.1 similar to Yersinia pestis YPO3565 membrane protein (100% evalue=3.E-73); Salmonella typhimurium STM3347 yhcB; periplasmic protein (80.3% evalue=2.E-53); cytochrome d ubiquinol oxidase subunit III 4180111 2954896 YPTB3510 Yersinia pseudotuberculosis IP 32953 cytochrome d ubiquinol oxidase subunit III YP_071993.1 4179707 D 273123 CDS YP_071994.1 51597803 2955447 4180382..4181755 1 NC_006155.1 similar to Yersinia pestis YPO3566 degQ, hhoA; protease (100% evalue=0); Salmonella typhi STY3528 degQ; serine protease (72.9% evalue=0); protease 4181755 degQ 2955447 degQ Yersinia pseudotuberculosis IP 32953 protease YP_071994.1 4180382 D 273123 CDS YP_071995.1 51597804 2955448 4181845..4182933 1 NC_006155.1 similar to Yersinia pestis YPO3568 degS, hhoB, htrH; protease (100% evalue=0); Escherichia coli b3235 degS, hhoB, htrH; protease degS precursor (71.2% evalue=1.E-136); serine endoprotease 4182933 degS 2955448 degS Yersinia pseudotuberculosis IP 32953 serine endoprotease YP_071995.1 4181845 D 273123 CDS YP_071996.1 51597805 2956098 complement(4183114..4184376) 1 NC_006155.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4184376 murA 2956098 murA Yersinia pseudotuberculosis IP 32953 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_071996.1 4183114 R 273123 CDS YP_071997.1 51597806 2954897 complement(4184530..4184793) 1 NC_006155.1 similar to Yersinia pestis YPO3570 BolA-like protein (98.8% evalue=4.E-44); Escherichia coli ECs4069 hypothetical protein (82.1% evalue=1.E-34); BolA/YrbA family protein 4184793 2954897 YPTB3514 Yersinia pseudotuberculosis IP 32953 BolA/YrbA family protein YP_071997.1 4184530 R 273123 CDS YP_071998.1 51597807 2954898 complement(4184931..4185233) 1 NC_006155.1 similar to Yersinia pestis YPO3571 anti-sigma B factor antagonist (100% evalue=2.E-49); Escherichia coli ECs4070 hypothetical protein (43.3% evalue=4.E-17); anti-sigma B factor antagonist 4185233 2954898 YPTB3515 Yersinia pseudotuberculosis IP 32953 anti-sigma B factor antagonist YP_071998.1 4184931 R 273123 CDS YP_071999.1 51597808 2957115 complement(4185269..4185892) 1 NC_006155.1 similar to Yersinia pestis YPO3572 yrbC; exported protein (100% evalue=1.E-116); Salmonella typhimurium STM3310 yrbC; ABC superfamily (atp&memb), transport protein (77.5% evalue=9.E-92); hypothetical protein 4185892 yrbC 2957115 yrbC Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_071999.1 4185269 R 273123 CDS YP_072000.1 51597809 2957116 complement(4185905..4186462) 1 NC_006155.1 similar to Yersinia pestis YPO3573 yrbD; membrane protein (99.4% evalue=1.E-101); Salmonella typhi STY3490 possible exported protein (67.5% evalue=3.E-68); hypothetical protein 4186462 yrbD 2957116 yrbD Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072000.1 4185905 R 273123 CDS YP_072001.1 51597810 2957117 complement(4186467..4187249) 1 NC_006155.1 similar to Yersinia pestis YPO3574 yrbE; membrane protein (100% evalue=1.E-142); Escherichia coli Z4557 yrbE; ABC transporter permease (82.6% evalue=1.E-122); toluene tolerance ABC transporter permease 4187249 yrbE 2957117 yrbE Yersinia pseudotuberculosis IP 32953 toluene tolerance ABC transporter permease YP_072001.1 4186467 R 273123 CDS YP_072002.1 51597811 2957118 complement(4187467..4188285) 1 NC_006155.1 ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein 4188285 yrbF 2957118 yrbF Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_072002.1 4187467 R 273123 CDS YP_072003.1 51597812 2957119 4188550..4189524 1 NC_006155.1 YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 4189524 yrbG 2957119 yrbG Yersinia pseudotuberculosis IP 32953 calcium/sodium:proton antiporter YP_072003.1 4188550 D 273123 CDS YP_072004.1 51597813 2954899 4189635..4190621 1 NC_006155.1 similar to Yersinia pestis YPO3577 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM3315 yrbH; polysialic acid capsule expression protein (78.6% evalue=1.E-147); D-arabinose 5-phosphate isomerase 4190621 2954899 YPTB3521 Yersinia pseudotuberculosis IP 32953 D-arabinose 5-phosphate isomerase YP_072004.1 4189635 D 273123 CDS YP_072005.1 51597814 2954900 4191027..4191590 1 NC_006155.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4191590 2954900 YPTB3522 Yersinia pseudotuberculosis IP 32953 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_072005.1 4191027 D 273123 CDS YP_072006.1 51597815 2957120 4191587..4192150 1 NC_006155.1 similar to Yersinia pestis YPO3579 yrbK; exported protein (99.4% evalue=1.E-102); Escherichia coli JW3166 yrbK; Hypothetical protein (o191) (56.4% evalue=3.E-58); hypothetical protein 4192150 yrbK 2957120 yrbK Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072006.1 4191587 D 273123 CDS YP_072007.1 51597816 2954901 4192134..4192679 1 NC_006155.1 LptA; periplasmic binding protein part of a ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA 4192679 2954901 YPTB3524 Yersinia pseudotuberculosis IP 32953 lipopolysaccharide transport periplasmic protein LptA YP_072007.1 4192134 D 273123 CDS YP_072008.1 51597817 2957054 4192686..4193411 1 NC_006155.1 similar to Yersinia pestis YPO3581 yhbG; probable ABC transporter ATP-binding protein (100% evalue=1.E-131); Escherichia coli JW3168 yhbG; probable ABC transporter ATP-binding protein (88.7% evalue=1.E-117); ABC transporter ATP-binding protein 4193411 yhbG 2957054 yhbG Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_072008.1 4192686 D 273123 CDS YP_072009.1 51597818 2956526 4193473..4194906 1 NC_006155.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4194906 rpoN 2956526 rpoN Yersinia pseudotuberculosis IP 32953 RNA polymerase factor sigma-54 YP_072009.1 4193473 D 273123 CDS YP_072010.1 51597819 2957055 4194930..4195217 1 NC_006155.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein 4195217 yhbH 2957055 yhbH Yersinia pseudotuberculosis IP 32953 sigma(54) modulation protein YP_072010.1 4194930 D 273123 CDS YP_072011.1 51597820 2956363 4195336..4195818 1 NC_006155.1 similar to Yersinia pestis YPO3585 ptsN, rpoP; nitrogen regulatory IIA protein (100% evalue=2.E-84); Escherichia coli Z4567 ptsN; phosphotransferase system enzyme IIA, regulates N metabolism (86.1% evalue=3.E-69); PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4195818 ptsN 2956363 ptsN Yersinia pseudotuberculosis IP 32953 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_072011.1 4195336 D 273123 CDS YP_072012.1 51597821 2954902 4196124..4196978 1 NC_006155.1 similar to Yersinia pestis YPO3586 conserved hypothetical protein (100% evalue=1.E-161); Escherichia coli Z4568 yhbJ; orf, hypothetical protein (94.3% evalue=1.E-153); hypothetical protein 4196978 2954902 YPTB3529 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072012.1 4196124 D 273123 CDS YP_072013.1 51597822 2956364 4196975..4197247 1 NC_006155.1 similar to Yersinia pestis YPO3587 ptsO, npr, rpoR; phosphocarrier protein (100% evalue=4.E-43); Salmonella typhi STY3503 ptsO; phosphocarrier protein (nitrogen related hpr) (85.5% evalue=1.E-37); PTS system phosphohistidinoprotein-hexose phosphotransferase Npr 4197247 ptsO 2956364 ptsO Yersinia pseudotuberculosis IP 32953 PTS system phosphohistidinoprotein-hexose phosphotransferase Npr YP_072013.1 4196975 D 273123 CDS YP_072014.1 51597823 2956384 4197585..4198520 1 NC_006155.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 4198520 pyrB 2956384 pyrB Yersinia pseudotuberculosis IP 32953 aspartate carbamoyltransferase YP_072014.1 4197585 D 273123 CDS YP_072015.1 51597824 2956391 4198529..4198996 1 NC_006155.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase 4198996 pyrI 2956391 pyrI Yersinia pseudotuberculosis IP 32953 aspartate carbamoyltransferase YP_072015.1 4198529 D 273123 CDS YP_072016.1 51597825 2954903 4199134..4199520 1 NC_006155.1 similar to Yersinia pestis YPO3590 conserved hypothetical protein (93.7% evalue=1.E-61); Salmonella typhi STY4798 yjgF; conserved hypothetical protein (89% evalue=3.E-59); hypothetical protein 4199520 2954903 YPTB3533 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072016.1 4199134 D 273123 CDS YP_072017.1 51597826 2954904 4199819..4200295 1 NC_006155.1 similar to Yersinia pestis YPO3699 exported protein (100% evalue=4.E-87); hypothetical protein 4200295 2954904 YPTB3534 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072017.1 4199819 D 273123 CDS YP_072018.1 51597827 2956730 4200529..4201482 1 NC_006155.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor 4201482 treR 2956730 treR Yersinia pseudotuberculosis IP 32953 trehalose repressor YP_072018.1 4200529 D 273123 CDS YP_072019.1 51597828 2956728 4201893..4203308 1 NC_006155.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC 4203308 treB 2956728 treB Yersinia pseudotuberculosis IP 32953 PTS system trehalose(maltose)-specific transporter subunit IIBC YP_072019.1 4201893 D 273123 CDS YP_072020.1 51597829 2956729 4203403..4205070 1 NC_006155.1 similar to Yersinia pestis YPO3696 treC, olgH; trehalose-6-phosphate hydrolase (100% evalue=0); Salmonella typhi STY4793 treC; trehalose-6-phosphate hydrolase (73.1% evalue=0); trehalose-6-phosphate hydrolase 4205070 treC 2956729 treC Yersinia pseudotuberculosis IP 32953 trehalose-6-phosphate hydrolase YP_072020.1 4203403 D 273123 CDS YP_072021.1 51597830 2956472 4205423..4205833 1 NC_006155.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4205833 rnk 2956472 rnk Yersinia pseudotuberculosis IP 32953 nucleoside diphosphate kinase regulator YP_072021.1 4205423 D 273123 CDS YP_072022.1 51597831 2954905 complement(4206077..4206463) 1 NC_006155.1 similar to Yersinia pestis YPO3694 cytochrome (100% evalue=6.E-66); Salmonella typhi STY4778 cybC; soluble cytochrome b562 (52.3% evalue=1.E-31); cytochrome 4206463 2954905 YPTB3539 Yersinia pseudotuberculosis IP 32953 cytochrome YP_072022.1 4206077 R 273123 CDS YP_072023.1 51597832 2956280 complement(4207439..4208779) 1 NC_006155.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 4208779 pmbA 2956280 pmbA Yersinia pseudotuberculosis IP 32953 peptidase PmbA YP_072023.1 4207439 R 273123 CDS YP_072024.1 51597833 2954907 4208960..4209508 1 NC_006155.1 similar to Yersinia pestis YPO3691 conserved hypothetical protein (97.8% evalue=1.E-97); Escherichia coli ECs5211 alpha helix protein (78.5% evalue=6.E-76); hypothetical protein 4209508 2954907 YPTB3542 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072024.1 4208960 D 273123 CDS YP_072025.1 51597834 2954908 complement(4209652..4209933) 1 NC_006155.1 similar to Yersinia pestis YPO3690 ribonuclease inhibitor (100% evalue=3.E-48); Escherichia coli Z4598 yhcO; orf, hypothetical protein (53% evalue=2.E-18); ribonuclease inhibitor 4209933 2954908 YPTB3543 Yersinia pseudotuberculosis IP 32953 ribonuclease inhibitor YP_072025.1 4209652 R 273123 CDS YP_072026.1 51597835 2954909 complement(4209938..4210411) 1 NC_006155.1 similar to Yersinia pestis YPO3689 ribonuclease (100% evalue=1.E-85); Clostridium acetobutylicum CAC0843 ribonuclease precursor (barnase), secreted. (41.5% evalue=2.E-25); ribonuclease 4210411 2954909 YPTB3544 Yersinia pseudotuberculosis IP 32953 ribonuclease YP_072026.1 4209938 R 273123 CDS YP_072027.1 51597836 2954910 complement(4210606..4212075) 1 NC_006155.1 similar to Salmonella typhi STY2911 gabD; succinate-semialdehyde dehydrogenase (56.8% evalue=1.E-155); Salmonella typhimurium STM2791 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent (57% evalue=1.E-156); succinate-semialdehyde dehydrogenase 4212075 2954910 YPTB3545 Yersinia pseudotuberculosis IP 32953 succinate-semialdehyde dehydrogenase YP_072027.1 4210606 R 273123 CDS YP_072028.1 51597837 2957056 complement(4212342..4214297) 1 NC_006155.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 4214297 yhcP 2957056 yhcP Yersinia pseudotuberculosis IP 32953 p-hydroxybenzoic acid efflux subunit AaeB YP_072028.1 4212342 R 273123 CDS YP_072029.1 51597838 2957057 complement(4214299..4215234) 1 NC_006155.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 4215234 yhcQ 2957057 yhcQ Yersinia pseudotuberculosis IP 32953 p-hydroxybenzoic acid efflux subunit AaeA YP_072029.1 4214299 R 273123 CDS YP_072030.1 51597839 2954911 complement(4215242..4215445) 1 NC_006155.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 4215445 2954911 YPTB3548 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072030.1 4215242 R 273123 CDS YP_072031.1 51597840 2954912 4215748..4216659 1 NC_006155.1 similar to Yersinia pestis YPO3683 probable lysR-family transcriptional regulatory protein (99.3% evalue=1.E-171); Escherichia coli ECs4116 transcriptional regulator LYSR-type (80.7% evalue=1.E-137); DNA-binding transcriptional regulator 4216659 2954912 YPTB3549 Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional regulator YP_072031.1 4215748 D 273123 CDS YP_072032.1 51597841 2954913 4216920..4217786 1 NC_006155.1 similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (99.3% evalue=1.E-163); LysR family transcriptional regulator 4217786 2954913 YPTB3550 Yersinia pseudotuberculosis IP 32953 LysR family transcriptional regulator YP_072032.1 4216920 D 273123 CDS YP_072033.1 51597842 2954914 4218022..4220514 1 NC_006155.1 similar to Yersinia pestis YPO3681 insecticial toxin (96.2% evalue=0); insecticial toxin 4220514 2954914 YPTB3551 Yersinia pseudotuberculosis IP 32953 insecticial toxin YP_072033.1 4218022 D 273123 CDS YP_072034.1 51597843 2954915 4220555..4224133 1 NC_006155.1 insecticidal toxin complex protein 4224133 2954915 YPTB3552 Yersinia pseudotuberculosis IP 32953 insecticidal toxin complex protein YP_072034.1 4220555 D 273123 CDS YP_072035.1 51597844 2956672 4224190..4228659 1 NC_006155.1 similar to Yersinia pestis YPO3678 tcaC; insecticidal toxin complex (91.9% evalue=0); Salmonella typhimurium PSLT039 spvB; Salmonella plasmid virulence: hydrophilic protein (45% evalue=4.E-78); insecticidal toxin complex 4228659 tcaC 2956672 tcaC Yersinia pseudotuberculosis IP 32953 insecticidal toxin complex YP_072035.1 4224190 D 273123 CDS YP_072036.1 51597845 2954916 4228799..4229101 1 NC_006155.1 similar to Yersinia pestis YPO3677 phage-related protein (100% evalue=6.E-55); Escherichia coli ECs1621 holin protein (45.6% evalue=3.E-19); hypothetical protein 4229101 2954916 YPTB3554 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072036.1 4228799 D 273123 CDS YP_072037.1 51597846 2954917 4229114..4229515 1 NC_006155.1 similar to Yersinia pestis YPO3676 phage-related protein (98.4% evalue=1.E-76); Agrobacterium tumefaciens Atu0462 endolysin (58.1% evalue=1.E-36); hypothetical protein 4229515 2954917 YPTB3555 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072037.1 4229114 D 273123 CDS YP_072038.1 51597847 2954918 4229503..4229871 1 NC_006155.1 similar to Yersinia pestis YPO3675 exported protein (98.3% evalue=1.E-58); hypothetical protein 4229871 2954918 YPTB3556 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072038.1 4229503 D 273123 CDS YP_072039.1 51597848 2954919 4230131..4232989 1 NC_006155.1 similar to Yersinia pestis YPO3674 insecticidal toxin (76.9% evalue=0); insecticidal toxin 4232989 2954919 YPTB3557 Yersinia pseudotuberculosis IP 32953 insecticidal toxin YP_072039.1 4230131 D 273123 CDS YP_072040.1 51597849 2956708 complement(4233190..4234635) 1 NC_006155.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 4234635 tldD 2956708 tldD Yersinia pseudotuberculosis IP 32953 protease TldD YP_072040.1 4233190 R 273123 CDS YP_072041.1 51597850 2954920 complement(4234647..4235516) 1 NC_006155.1 similar to Yersinia pestis YPO3671 carbon-nitrogen hydrolase (100% evalue=1.E-167); Vibrio cholerae VC0421 conserved hypothetical protein (48.4% evalue=6.E-71); carbon-nitrogen hydrolase 4235516 2954920 YPTB3559 Yersinia pseudotuberculosis IP 32953 carbon-nitrogen hydrolase YP_072041.1 4234647 R 273123 CDS YP_072042.1 51597851 2954921 complement(4235513..4239436) 1 NC_006155.1 similar to Yersinia pestis YPO3670 exported protein (99.2% evalue=0); Salmonella typhimurium STM3369 yhdP; paral protease (50.6% evalue=0); hypothetical protein 4239436 2954921 YPTB3560 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072042.1 4235513 R 273123 CDS YP_072043.1 51597852 2955302 complement(4239530..4240999) 1 NC_006155.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 4240999 cafA 2955302 cafA Yersinia pseudotuberculosis IP 32953 ribonuclease G YP_072043.1 4239530 R 273123 CDS YP_072044.1 51597853 2957059 complement(4240989..4241588) 1 NC_006155.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4241588 maf 2957059 maf Yersinia pseudotuberculosis IP 32953 Maf-like protein YP_072044.1 4240989 R 273123 CDS YP_072045.1 51597854 2956081 complement(4241596..4242084) 1 NC_006155.1 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 4242084 mreD 2956081 mreD Yersinia pseudotuberculosis IP 32953 rod shape-determining protein MreD YP_072045.1 4241596 R 273123 CDS YP_072046.1 51597855 2956080 complement(4242081..4243076) 1 NC_006155.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4243076 mreC 2956080 mreC Yersinia pseudotuberculosis IP 32953 rod shape-determining protein MreC YP_072046.1 4242081 R 273123 CDS YP_072047.1 51597856 2956079 complement(4243281..4244324) 1 NC_006155.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4244324 mreB 2956079 mreB Yersinia pseudotuberculosis IP 32953 rod shape-determining protein MreB YP_072047.1 4243281 R 273123 CDS YP_072048.1 51597857 2957058 complement(4244661..4246577) 1 NC_006155.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 4246577 yhdA 2957058 yhdA Yersinia pseudotuberculosis IP 32953 regulatory protein CsrD YP_072048.1 4244661 R 273123 CDS YP_072049.1 51597858 2957060 4246978..4247955 1 NC_006155.1 similar to Yersinia pestis YPO3663 yhdH; probable zinc-binding dehydrogenase (100% evalue=0); Escherichia coli ECs4125 dehydrogenase (74.6% evalue=1.E-140); zinc-binding dehydrogenase 4247955 yhdH 2957060 yhdH Yersinia pseudotuberculosis IP 32953 zinc-binding dehydrogenase YP_072049.1 4246978 D 273123 CDS YP_072050.1 51597859 2954922 4248178..4249278 1 NC_006155.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 4249278 2954922 YPTB3568 Yersinia pseudotuberculosis IP 32953 sulfite oxidase subunit YedY YP_072050.1 4248178 D 273123 CDS YP_072051.1 51597860 2954923 4249278..4249898 1 NC_006155.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 4249898 2954923 YPTB3569 Yersinia pseudotuberculosis IP 32953 sulfite oxidase subunit YedZ YP_072051.1 4249278 D 273123 CDS YP_072052.1 51597861 2955232 4250161..4250613 1 NC_006155.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4250613 aroQ 2955232 aroQ Yersinia pseudotuberculosis IP 32953 3-dehydroquinate dehydratase YP_072052.1 4250161 D 273123 CDS YP_072053.1 51597862 2955156 4250726..4251235 1 NC_006155.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 4251235 accB 2955156 accB Yersinia pseudotuberculosis IP 32953 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_072053.1 4250726 D 273123 CDS YP_072054.1 51597863 2955157 4251247..4252596 1 NC_006155.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 4252596 accC 2955157 accC Yersinia pseudotuberculosis IP 32953 acetyl-CoA carboxylase biotin carboxylase subunit YP_072054.1 4251247 D 273123 CDS YP_072055.1 51597864 2957061 4254078..4254320 1 NC_006155.1 similar to Yersinia pestis YPO3657a yhdT; membrane protein (100% evalue=1.E-41); Escherichia coli Z4617 yhdT; orf, hypothetical protein (69.6% evalue=8.E-28); hypothetical protein 4254320 yhdT 2957061 yhdT Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072055.1 4254078 D 273123 CDS YP_072056.1 51597865 2956211 4254310..4255764 1 NC_006155.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4255764 panF 2956211 panF Yersinia pseudotuberculosis IP 32953 sodium/panthothenate symporter YP_072056.1 4254310 D 273123 CDS YP_072057.2 161760558 2956321 4255840..4256721 1 NC_006155.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4256721 prmA 2956321 prmA Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L11 methyltransferase YP_072057.2 4255840 D 273123 CDS YP_072058.1 51597867 2954924 4257310..4258275 1 NC_006155.1 similar to Yersinia pestis YPO3655 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs4132 dehydrogenase (87.8% evalue=1.E-164); tRNA-dihydrouridine synthase B 4258275 2954924 YPTB3576 Yersinia pseudotuberculosis IP 32953 tRNA-dihydrouridine synthase B YP_072058.1 4257310 D 273123 CDS YP_072059.1 51597868 2955550 4258300..4258596 1 NC_006155.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; Fis family transcriptional regulator 4258596 fis 2955550 fis Yersinia pseudotuberculosis IP 32953 Fis family transcriptional regulator YP_072059.1 4258300 D 273123 CDS YP_072060.1 51597869 2954925 complement(4259350..4259826) 1 NC_006155.1 similar to Yersinia pestis YPO3652 hypothetical protein (100% evalue=7.E-89); hypothetical protein 4259826 2954925 YPTB3578 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072060.1 4259350 R 273123 CDS YP_072061.1 51597870 2954926 complement(4259892..4260566) 1 NC_006155.1 similar to Yersinia pestis YPO3651 GntR-family transcriptional regulatory protein (98.2% evalue=1.E-115); Mesorhizobium loti mll6786 transcriptional regulator (37.1% evalue=2.E-33); GntR family transcriptional regulator 4260566 2954926 YPTB3579 Yersinia pseudotuberculosis IP 32953 GntR family transcriptional regulator YP_072061.1 4259892 R 273123 CDS YP_072062.1 51597871 2954927 complement(4260656..4262020) 1 NC_006155.1 similar to Yersinia pestis YPO3650 metabolite transport protein (99.5% evalue=0); Thermoplasma volcanium TVG1213986 shikimate transporter (26.5% evalue=9.E-43); major facilitator superfamily metabolite symporter 4262020 2954927 YPTB3580 Yersinia pseudotuberculosis IP 32953 major facilitator superfamily metabolite symporter YP_072062.1 4260656 R 273123 CDS YP_072063.1 51597872 2954928 complement(4262174..4262569) 1 NC_006155.1 similar to Yersinia pestis YPO3649 gamma carboxymuconolactone decarboxylase (98.4% evalue=2.E-71); S. C3502 solfataricus SSO2884 pcaC; 4-carboxymucolactone decarboxylase (49.1% evalue=1.E-28); gamma carboxymuconolactone decarboxylase 4262569 2954928 YPTB3581 Yersinia pseudotuberculosis IP 32953 gamma carboxymuconolactone decarboxylase YP_072063.1 4262174 R 273123 CDS YP_072064.1 51597873 2954929 complement(4262774..4263664) 1 NC_006155.1 similar to Yersinia pestis YPO3648 2-hydroxy-3-oxopropionate reductase (99.6% evalue=1.E-164); Ralstonia solanacearum RS05573 mmsB, RSp0649; probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase (34.2% evalue=6.E-38); 2-hydroxy-3-oxopropionate reductase 4263664 2954929 YPTB3582 Yersinia pseudotuberculosis IP 32953 2-hydroxy-3-oxopropionate reductase YP_072064.1 4262774 R 273123 CDS YP_072065.1 51597874 2954930 complement(4263729..4264541) 1 NC_006155.1 similar to Yersinia pestis YPO3647 conserved hypothetical protein (99.2% evalue=1.E-162); A. fulgidus AF1509 A. fulgidus predicted coding region AF1509 (27.3% evalue=3.E-14); hypothetical protein 4264541 2954930 YPTB3583 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072065.1 4263729 R 273123 CDS YP_072066.1 51597875 2956220 4265017..4265484 1 NC_006155.1 similar to Yersinia pestis YPO3646 pcp, pcpY, slyB; outer membrane lipoprotein (100% evalue=7.E-81); outer membrane lipoprotein 4265484 pcp 2956220 pcp Yersinia pseudotuberculosis IP 32953 outer membrane lipoprotein YP_072066.1 4265017 D 273123 CDS YP_072067.1 51597876 2955365 4266018..4266230 1 NC_006155.1 similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (98.5% evalue=2.E-34); cold-shock protein CspA 4266230 cspa1 2955365 cspa1 Yersinia pseudotuberculosis IP 32953 cold-shock protein CspA YP_072067.1 4266018 D 273123 CDS YP_072068.1 51597877 2955366 4266490..4266702 1 NC_006155.1 similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (98.5% evalue=2.E-34); cold-shock protein CspA 4266702 cspa1 2955366 cspa1 Yersinia pseudotuberculosis IP 32953 cold-shock protein CspA YP_072068.1 4266490 D 273123 CDS YP_072069.1 51597878 2955367 4266962..4267174 1 NC_006155.1 similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (97.1% evalue=5.E-34); cold-shock protein CspA 4267174 cspa2 2955367 cspa2 Yersinia pseudotuberculosis IP 32953 cold-shock protein CspA YP_072069.1 4266962 D 273123 CDS YP_072070.1 51597879 2954931 4267510..4268685 1 NC_006155.1 similar to Yersinia pestis YPO3641 hypothetical protein (99.4% evalue=0); Salmonella typhimurium STM0567 ATPase involved in DNA repair (58.5% evalue=1.E-125); hypothetical protein 4268685 2954931 YPTB3588 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072070.1 4267510 D 273123 CDS YP_072071.1 51597880 2954932 complement(4268837..4270183) 1 NC_006155.1 similar to Yersinia pestis YPO3640 exported protein (99.7% evalue=0); Sinorhizobium meliloti SMc00620 hypothetical signal peptide protein (53% evalue=1.E-129); hypothetical protein 4270183 2954932 YPTB3589 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072071.1 4268837 R 273123 CDS YP_072072.1 51597881 2957052 4270434..4271288 1 NC_006155.1 YghU; B2989; one of eight glutathione transferases from E. coli; glutathione S-transferase 4271288 yghU 2957052 yghU Yersinia pseudotuberculosis IP 32953 glutathione S-transferase YP_072072.1 4270434 D 273123 CDS YP_072073.1 51597882 2954933 complement(4271387..4271992) 1 NC_006155.1 similar to Yersinia pestis YPO3638 phosphosugar isomerase/binding protein (99.5% evalue=1.E-108); Listeria innocua lin0502 similar to sugar-phosphate isomerase (44.5% evalue=5.E-42); phosphosugar isomerase/binding protein 4271992 2954933 YPTB3591 Yersinia pseudotuberculosis IP 32953 phosphosugar isomerase/binding protein YP_072073.1 4271387 R 273123 CDS YP_072074.1 51597883 2954934 complement(4271989..4273626) 1 NC_006155.1 similar to Yersinia pestis YPO3637 carbohydrate kinase (100% evalue=0); A. thalianan At4g30310 F17I23.350; protein (50.4% evalue=1.E-162); carbohydrate kinase 4273626 2954934 YPTB3592 Yersinia pseudotuberculosis IP 32953 carbohydrate kinase YP_072074.1 4271989 R 273123 CDS YP_072075.1 51597884 2954935 complement(4273645..4274598) 1 NC_006155.1 similar to Yersinia pestis YPO3636 ABC transporter, permease (99.3% evalue=1.E-170); Escherichia coli Z0419 permease component of transport system, probably ribose specific (58.7% evalue=6.E-91); sugar ABC transporter permease 4274598 2954935 YPTB3593 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_072075.1 4273645 R 273123 CDS YP_072076.1 51597885 2954936 complement(4274600..4275589) 1 NC_006155.1 similar to Yersinia pestis YPO3635 branched-chain amino acid transport system, permease component (99.6% evalue=0); Escherichia coli Z0418 permease component of transport system, probably ribose specific (57.5% evalue=1.E-105); sugar ABC transporter permease 4275589 2954936 YPTB3594 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter permease YP_072076.1 4274600 R 273123 CDS YP_072077.1 51597886 2954937 complement(4275582..4277078) 1 NC_006155.1 similar to Yersinia pestis YPO3634 ABC transporter ATP binding protein (100% evalue=0); sugar ABC transporter ATPase 4277078 2954937 YPTB3595 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter ATPase YP_072077.1 4275582 R 273123 CDS YP_072078.1 51597887 2954938 complement(4277282..4278271) 1 NC_006155.1 similar to Yersinia pestis YPO3633 periplasmic binding protein (100% evalue=0); Escherichia coli ECs0374 sugar-binding protein (53.3% evalue=1.E-95); sugar ABC transporter substrate-binding protein 4278271 2954938 YPTB3596 Yersinia pseudotuberculosis IP 32953 sugar ABC transporter substrate-binding protein YP_072078.1 4277282 R 273123 CDS YP_072079.2 161760557 2955437 4279078..4279998 1 NC_006155.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 4279998 ddg 2955437 ddg Yersinia pseudotuberculosis IP 32953 lipid A biosynthesis palmitoleoyl acyltransferase YP_072079.2 4279078 D 273123 CDS YP_072080.1 51597889 2954939 4280150..4281337 1 NC_006155.1 similar to Yersinia pestis YPO3631 exported protein (99.4% evalue=0); hypothetical protein 4281337 2954939 YPTB3598 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072080.1 4280150 D 273123 CDS YP_072081.1 51597890 2957083 complement(4281559..4283208) 1 NC_006155.1 similar to Yersinia pestis YPO3630 yjcE; Na(+)/H(+) exchanger protein (100% evalue=0); Escherichia coli ECs5047 hypothetical protein (75.3% evalue=0); Na(+)/H(+) exchanger protein 4283208 yjcE 2957083 yjcE Yersinia pseudotuberculosis IP 32953 Na(+)/H(+) exchanger protein YP_072081.1 4281559 R 273123 CDS YP_072082.1 51597891 2957082 complement(4283573..4284928) 1 NC_006155.1 similar to Yersinia pestis YPO3629 yjcD; xanthine/uracil permease (99.7% evalue=0); Escherichia coli ECs3757 oxidoreductase (87.5% evalue=0); xanthine/uracil permease 4284928 yjcD 2957082 yjcD Yersinia pseudotuberculosis IP 32953 xanthine/uracil permease YP_072082.1 4283573 R 273123 CDS YP_072083.1 51597892 2954940 4285383..4285586 1 NC_006155.1 similar to Yersinia pestis YPO3628 DNA-damage-inducible protein (100% evalue=5.E-31); DNA-damage-inducible protein 4285586 2954940 YPTB3601 Yersinia pseudotuberculosis IP 32953 DNA-damage-inducible protein YP_072083.1 4285383 D 273123 CDS YP_072084.1 51597893 2956640 complement(4286205..4287020) 1 NC_006155.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit 4287020 ssuB 2956640 ssuB Yersinia pseudotuberculosis IP 32953 aliphatic sulfonates transport ATP-binding subunit YP_072084.1 4286205 R 273123 CDS YP_072085.1 51597894 2956641 complement(4287017..4287814) 1 NC_006155.1 similar to Yersinia pestis YPO3626 ssuC; aliphatic sulfonates transport permease (100% evalue=1.E-148); Pseudomonas aeruginosa PA3443 alkanesulfonate transport system permease (80.9% evalue=1.E-119); aliphatic sulfonates ABC transporter permease 4287814 ssuC 2956641 ssuC Yersinia pseudotuberculosis IP 32953 aliphatic sulfonates ABC transporter permease YP_072085.1 4287017 R 273123 CDS YP_072086.1 51597895 2956642 complement(4287823..4288971) 1 NC_006155.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 4288971 ssuD 2956642 ssuD Yersinia pseudotuberculosis IP 32953 alkanesulfonate monooxygenase YP_072086.1 4287823 R 273123 CDS YP_072087.1 51597896 2956639 complement(4288990..4290096) 1 NC_006155.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit 4290096 ssuA 2956639 ssuA Yersinia pseudotuberculosis IP 32953 alkanesulfonate transporter substrate-binding subunit YP_072087.1 4288990 R 273123 CDS YP_072088.1 51597897 2956643 complement(4290111..4290692) 1 NC_006155.1 similar to Yersinia pestis YPO3623 ssuE; NAD(P)H-dependent FMN reductase (100% evalue=1.E-102); Escherichia coli ECs1020 NAD(P)H-dependent FMN reductase (61.7% evalue=5.E-54); NAD(P)H-dependent FMN reductase 4290692 ssuE 2956643 ssuE Yersinia pseudotuberculosis IP 32953 NAD(P)H-dependent FMN reductase YP_072088.1 4290111 R 273123 CDS YP_072089.1 51597898 2954941 4291163..4291864 1 NC_006155.1 similar to Yersinia pestis YPO3622 deoxyribose-phosphate aldolase (99.5% evalue=1.E-131); Methanothermobacter thermautotrophicus MTH818 deoxyribose-phosphate aldolase (34.1% evalue=3.E-26); deoxyribose-phosphate aldolase 4291864 2954941 YPTB3607 Yersinia pseudotuberculosis IP 32953 deoxyribose-phosphate aldolase YP_072089.1 4291163 D 273123 CDS YP_072090.1 51597899 2954942 4292045..4292974 1 NC_006155.1 similar to Yersinia pestis YPO3621 probable carbohydrate kinase (99.3% evalue=1.E-172); Pseudomonas aeruginosa PA1950 rbsK; ribokinase (39.2% evalue=4.E-48); carbohydrate kinase 4292974 2954942 YPTB3608 Yersinia pseudotuberculosis IP 32953 carbohydrate kinase YP_072090.1 4292045 D 273123 CDS YP_072091.1 51597900 2954943 4292980..4293483 1 NC_006155.1 similar to Yersinia pestis YPO3620 carbohydrate transport protein (98.8% evalue=2.E-92); H. influenzae HI0501 rbsD; D-ribose transport system permease (34% evalue=9.E-16); carbohydrate transport protein 4293483 2954943 YPTB3609 Yersinia pseudotuberculosis IP 32953 carbohydrate transport protein YP_072091.1 4292980 D 273123 CDS YP_072092.1 51597901 2954944 complement(4293643..4294521) 1 NC_006155.1 similar to Yersinia pestis YPO3619 araC-family transcriptional regulatory protein (99.6% evalue=1.E-173); Pseudomonas aeruginosa PA3571 mmsR; transcriptional regulator MmsR (23.5% evalue=6.E-20); AraC family transcriptional regulator 4294521 2954944 YPTB3610 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_072092.1 4293643 R 273123 CDS YP_072093.1 51597902 2954945 4294779..4295909 1 NC_006155.1 similar to Yersinia pestis YPO3618 oxidoreductase (100% evalue=0); Mesorhizobium loti mll1735 hypothetical protein (43.9% evalue=5.E-84); oxidoreductase 4295909 2954945 YPTB3611 Yersinia pseudotuberculosis IP 32953 oxidoreductase YP_072093.1 4294779 D 273123 CDS YP_072094.1 51597903 2954946 4295906..4296805 1 NC_006155.1 similar to Yersinia pestis YPO3617 hypothetical protein (100% evalue=1.E-172); Mesorhizobium loti mll1734 unknown protein (51.4% evalue=5.E-92); hypothetical protein 4296805 2954946 YPTB3612 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072094.1 4295906 D 273123 CDS YP_072095.1 51597904 2954947 complement(4297082..4297327) 1 NC_006155.1 similar to Yersinia pestis YPO3613 Rhs accessory genetic element (96.8% evalue=7.E-32); Rhs accessory genetic element 4297327 2954947 YPTB3613 Yersinia pseudotuberculosis IP 32953 Rhs accessory genetic element YP_072095.1 4297082 R 273123 CDS YP_072096.1 51597905 2954948 complement(4297516..4297797) 1 NC_006155.1 hypothetical protein 4297797 2954948 YPTB3614 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072096.1 4297516 R 273123 CDS YP_072097.1 51597906 2954949 complement(4297794..4302356) 1 NC_006155.1 similar to Yersinia pestis YPO3615 membrane protein (98.1% evalue=0); Ralstonia solanacearum RS05482 rhs-related transmembrane protein (33% evalue=0); hypothetical protein 4302356 2954949 YPTB3615 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072097.1 4297794 R 273123 CDS YP_072098.1 51597907 2954950 complement(4302401..4302823) 1 NC_006155.1 similar to Yersinia pestis YPO3614 conserved hypothetical protein (100% evalue=7.E-78); Ralstonia solanacearum RS05481 conserved hypothetical protein (36.4% evalue=5.E-22); hypothetical protein 4302823 2954950 YPTB3616 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072098.1 4302401 R 273123 CDS YP_072099.1 51597908 2954951 complement(4302826..4305024) 1 NC_006155.1 similar to Yersinia pestis YPO3613 Rhs accessory genetic element (98.9% evalue=0); Rhs accessory genetic element 4305024 2954951 YPTB3617 Yersinia pseudotuberculosis IP 32953 Rhs accessory genetic element YP_072099.1 4302826 R 273123 CDS YP_072100.1 51597909 2954952 4305385..4305792 1 NC_006155.1 similar to Yersinia pestis YPO3612 transcriptional regulatory protein (100% evalue=2.E-70); Vibrio cholerae VC1464 transcriptional repressor RstR (33.6% evalue=3.E-12); transcriptional regulator 4305792 2954952 YPTB3618 Yersinia pseudotuberculosis IP 32953 transcriptional regulator YP_072100.1 4305385 D 273123 CDS YP_072101.1 51597910 2954953 4306095..4306448 1 NC_006155.1 similar to Yersinia pestis YPO3611 hypothetical protein (80.3% evalue=8.E-17); hypothetical protein 4306448 2954953 YPTB3619 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072101.1 4306095 D 273123 CDS YP_072102.1 51597911 2954954 complement(4306508..4307125) 1 NC_006155.1 hypothetical protein 4307125 2954954 YPTB3620 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072102.1 4306508 R 273123 CDS YP_072103.1 51597912 2954955 complement(4307136..4311404) 1 NC_006155.1 similar to Yersinia pestis YPO3608 exported protein (99.6% evalue=0); hypothetical protein 4311404 2954955 YPTB3621 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072103.1 4307136 R 273123 CDS YP_072104.1 51597913 2954956 complement(4311397..4311855) 1 NC_006155.1 similar to Yersinia pestis YPO3607 conserved hypothetical protein (100% evalue=1.E-87); Salmonella typhi STY0320 hypothetical protein (35.7% evalue=1.E-17); hypothetical protein 4311855 2954956 YPTB3622 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072104.1 4311397 R 273123 CDS YP_072105.1 51597914 2954957 complement(4311861..4314080) 1 NC_006155.1 similar to Yersinia pestis YPO3613 Rhs accessory genetic element (83.8% evalue=0); Rhs accessory genetic element 4314080 2954957 YPTB3623 Yersinia pseudotuberculosis IP 32953 Rhs accessory genetic element YP_072105.1 4311861 R 273123 CDS YP_072106.1 51597915 2954958 complement(4314102..4315415) 1 NC_006155.1 similar to Yersinia pestis YPO3605 conserved hypothetical protein (100% evalue=6.E-95); hypothetical protein 4315415 2954958 YPTB3624 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072106.1 4314102 R 273123 CDS YP_072107.1 51597916 2954959 complement(4315540..4319073) 1 NC_006155.1 similar to Yersinia pestis YPO3603 exported protein (99.7% evalue=0); Escherichia coli Z0250 macrophage toxin (57.3% evalue=0); hypothetical protein 4319073 2954959 YPTB3625 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072107.1 4315540 R 273123 CDS YP_072108.1 51597917 2954960 complement(4319105..4320493) 1 NC_006155.1 similar to Yersinia pestis YPO3602 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0220 hypothetical protein (53.3% evalue=4.E-71); hypothetical protein 4320493 2954960 YPTB3626 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072108.1 4319105 R 273123 CDS YP_072109.1 51597918 2954961 complement(4320499..4321185) 1 NC_006155.1 similar to Yersinia pestis YPO3601 conserved hypothetical protein (99.1% evalue=1.E-127); Escherichia coli ECs0222 hypothetical protein (50.2% evalue=1.E-47); hypothetical protein 4321185 2954961 YPTB3627 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072109.1 4320499 R 273123 CDS YP_072110.1 51597919 2954962 complement(4321182..4321979) 1 NC_006155.1 similar to Yersinia pestis YPO3600 hypothetical protein (100% evalue=1.E-151); hypothetical protein 4321979 2954962 YPTB3628 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072110.1 4321182 R 273123 CDS YP_072111.1 51597920 2955335 complement(4321976..4324579) 1 NC_006155.1 similar to Yersinia pestis YPO3599 clpB2; Clp ATPase (100% evalue=0); Escherichia coli ECs0223 ATP-dependent Clp proteinase ATP-binding chain (67.2% evalue=0); Clp ATPase 4324579 clpB2 2955335 clpB2 Yersinia pseudotuberculosis IP 32953 Clp ATPase YP_072111.1 4321976 R 273123 CDS YP_072112.1 51597921 2954963 complement(4324590..4325357) 1 NC_006155.1 similar to Yersinia pestis YPO3598 membrane protein (100% evalue=1.E-148); Escherichia coli ECs0224 membrane protein (62.5% evalue=4.E-85); hypothetical protein 4325357 2954963 YPTB3630 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072112.1 4324590 R 273123 CDS YP_072113.1 51597922 2954964 complement(4325357..4326703) 1 NC_006155.1 similar to Yersinia pestis YPO3597 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0225 hypothetical protein (53.8% evalue=1.E-131); hypothetical protein 4326703 2954964 YPTB3631 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072113.1 4325357 R 273123 CDS YP_072114.1 51597923 2954965 complement(4326706..4327251) 1 NC_006155.1 similar to Yersinia pestis YPO3596 lipoprotein (100% evalue=1.E-101); Escherichia coli ECs0226 hypothetical lipoprotein (46.9% evalue=4.E-47); lipoprotein 4327251 2954965 YPTB3632 Yersinia pseudotuberculosis IP 32953 lipoprotein YP_072114.1 4326706 R 273123 CDS YP_072115.1 51597924 2954966 complement(4327251..4328567) 1 NC_006155.1 similar to Yersinia pestis YPO3595 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0227 hypothetical protein (45.2% evalue=6.E-98); hypothetical protein 4328567 2954966 YPTB3633 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072115.1 4327251 R 273123 CDS YP_072116.1 51597925 2954967 complement(4328693..4329781) 1 NC_006155.1 similar to Yersinia pestis YPO3594 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0228 hypothetical protein (57.8% evalue=1.E-104); hypothetical protein 4329781 2954967 YPTB3634 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072116.1 4328693 R 273123 CDS YP_072117.1 51597926 2954968 complement(4329745..4331565) 1 NC_006155.1 similar to Escherichia coli ECs0229 hypothetical protein (50.9% evalue=0); Escherichia coli Z0260 hypothetical protein (50.9% evalue=0); hypothetical protein 4331565 2954968 YPTB3635 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072117.1 4329745 R 273123 CDS YP_072118.1 51597927 2954969 complement(4331565..4332005) 1 NC_006155.1 similar to Yersinia pestis YPO3705 conserved hypothetical protein (100% evalue=4.E-79); Escherichia coli ECs0230 hypothetical protein (35.8% evalue=4.E-20); hypothetical protein 4332005 2954969 YPTB3636 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072118.1 4331565 R 273123 CDS YP_072119.1 51597928 2954970 complement(4332012..4333493) 1 NC_006155.1 similar to Yersinia pestis YPO3706 conserved hypothetical protein (99.7% evalue=0); Vibrio cholerae VCA0108 conserved hypothetical protein (77.1% evalue=0); hypothetical protein 4333493 2954970 YPTB3637 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072119.1 4332012 R 273123 CDS YP_072120.1 51597929 2954971 complement(4333561..4334058) 1 NC_006155.1 similar to Yersinia pestis YPO3707 conserved hypothetical protein (99.3% evalue=4.E-87); Escherichia coli Z0264 hypothetical protein (62.6% evalue=8.E-52); hypothetical protein 4334058 2954971 YPTB3638 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072120.1 4333561 R 273123 CDS YP_072121.1 51597930 2954972 4334582..4335100 1 NC_006155.1 similar to Yersinia pestis YPO3708 conserved hypothetical protein (99.4% evalue=1.E-97); Escherichia coli Z0266 hypothetical protein (80.2% evalue=7.E-80); hypothetical protein 4335100 2954972 YPTB3639 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072121.1 4334582 D 273123 CDS YP_072122.1 51597931 2954973 complement(4335252..4335530) 1 NC_006155.1 similar to Yersinia pestis YPO3709 hypothetical protein (95.6% evalue=1.E-46); hypothetical protein 4335530 2954973 YPTB3640 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072122.1 4335252 R 273123 CDS YP_072123.1 51597932 2955988 complement(4336002..4336913) 1 NC_006155.1 similar to Yersinia pestis YPO3710 malM, molA; maltose operon periplasmic protein (99.6% evalue=1.E-167); Salmonella typhi STY4428 malM; maltose operon periplasmic protein (50.6% evalue=3.E-82); maltose regulon periplasmic protein 4336913 malM 2955988 malM Yersinia pseudotuberculosis IP 32953 maltose regulon periplasmic protein YP_072123.1 4336002 R 273123 CDS YP_072124.1 51597933 2955934 complement(4337154..4338425) 1 NC_006155.1 porin involved in the transport of maltose and maltodextrins; maltoporin 4338425 lamB 2955934 lamB Yersinia pseudotuberculosis IP 32953 maltoporin YP_072124.1 4337154 R 273123 CDS YP_072125.1 51597934 2955987 complement(4338496..4339605) 1 NC_006155.1 with malEFG is involved in import of maltose/maltodextrin; maltose ABC transporter ATP-binding protein 4339605 malK 2955987 malK Yersinia pseudotuberculosis IP 32953 maltose ABC transporter ATP-binding protein YP_072125.1 4338496 R 273123 CDS YP_072126.1 51597935 2954974 complement(4339609..4339845) 1 NC_006155.1 similar to Yersinia pestis YPO3713 hypothetical protein, 100% identical.; hypothetical protein 4339845 2954974 YPTB3644 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072126.1 4339609 R 273123 CDS YP_072127.1 51597936 2955984 4340433..4341644 1 NC_006155.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter substrate-binding protein 4341644 malE 2955984 malE Yersinia pseudotuberculosis IP 32953 maltose ABC transporter substrate-binding protein YP_072127.1 4340433 D 273123 CDS YP_072128.1 51597937 2955985 4341831..4343408 1 NC_006155.1 with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 4343408 malF 2955985 malF Yersinia pseudotuberculosis IP 32953 maltose transporter membrane protein YP_072128.1 4341831 D 273123 CDS YP_072129.1 51597938 2955986 4343422..4344312 1 NC_006155.1 with MalKFE is involved in the transport of maltose into the cell; maltose ABC transporter permease 4344312 malG 2955986 malG Yersinia pseudotuberculosis IP 32953 maltose ABC transporter permease YP_072129.1 4343422 D 273123 CDS YP_072130.1 51597939 2957081 complement(4344455..4344862) 1 NC_006155.1 similar to Yersinia pestis YPO3717 yjbA; membrane protein (100% evalue=2.E-70); Escherichia coli b4030 yjbA; hypothetical 15.6 kD protein in pgi-xylE intergenic region (67.6% evalue=1.E-45); phosphate-starvation-inducible protein PsiE 4344862 yjbA 2957081 yjbA Yersinia pseudotuberculosis IP 32953 phosphate-starvation-inducible protein PsiE YP_072130.1 4344455 R 273123 CDS YP_072131.1 51597940 2956241 complement(4344997..4346643) 1 NC_006155.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4346643 pgi 2956241 pgi Yersinia pseudotuberculosis IP 32953 glucose-6-phosphate isomerase YP_072131.1 4344997 R 273123 CDS YP_072132.1 51597941 2955977 4347013..4348398 1 NC_006155.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase 4348398 lysC 2955977 lysC Yersinia pseudotuberculosis IP 32953 aspartate kinase YP_072132.1 4347013 D 273123 CDS YP_072133.1 51597942 2954976 4350725..4355632 1 NC_006155.1 similar to Yersinia pestis YPO3721 hemolysin (99.6% evalue=0); hemolysin 4355632 2954976 YPTB3652 Yersinia pseudotuberculosis IP 32953 hemolysin YP_072133.1 4350725 D 273123 CDS YP_072134.1 51597943 2956026 complement(4355728..4359420) 1 NC_006155.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4359420 metH 2956026 metH Yersinia pseudotuberculosis IP 32953 B12-dependent methionine synthase YP_072134.1 4355728 R 273123 CDS YP_072135.1 51597944 2954977 4359638..4360480 1 NC_006155.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator 4360480 2954977 YPTB3654 Yersinia pseudotuberculosis IP 32953 IclR family transcriptional regulator YP_072135.1 4359638 D 273123 CDS YP_072136.1 51597945 2955163 complement(4360600..4362327) 1 NC_006155.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase 4362327 aceK 2955163 aceK Yersinia pseudotuberculosis IP 32953 bifunctional isocitrate dehydrogenase kinase/phosphatase YP_072136.1 4360600 R 273123 CDS YP_072137.1 51597946 2955159 complement(4362400..4363707) 1 NC_006155.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 4363707 aceA 2955159 aceA Yersinia pseudotuberculosis IP 32953 isocitrate lyase YP_072137.1 4362400 R 273123 CDS YP_072138.1 51597947 2955160 complement(4363754..4365352) 1 NC_006155.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4365352 aceB 2955160 aceB Yersinia pseudotuberculosis IP 32953 malate synthase YP_072138.1 4363754 R 273123 CDS YP_072139.1 51597948 2956019 complement(4365773..4366702) 1 NC_006155.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 4366702 metA 2956019 metA Yersinia pseudotuberculosis IP 32953 homoserine O-succinyltransferase YP_072139.1 4365773 R 273123 CDS YP_072140.1 51597949 2954978 4373446..4373988 1 NC_006155.1 similar to Salmonella typhi STY4398 yrdA; transferase (73.5% evalue=3.E-72); Salmonella typhimurium STM3399 yrdA; ferripyochelin binding protein (73.5% evalue=2.E-72); transferase 4373988 2954978 YPTB3659 Yersinia pseudotuberculosis IP 32953 transferase YP_072140.1 4373446 D 273123 CDS YP_072141.1 51597950 2955224 complement(4374043..4374864) 1 NC_006155.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 4374864 aroE 2955224 aroE Yersinia pseudotuberculosis IP 32953 shikimate 5-dehydrogenase YP_072141.1 4374043 R 273123 CDS YP_072142.1 51597951 2954979 complement(4374873..4375445) 1 NC_006155.1 RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; ribosome maturation factor 4375445 2954979 YPTB3661 Yersinia pseudotuberculosis IP 32953 ribosome maturation factor YP_072142.1 4374873 R 273123 CDS YP_072143.1 51597952 2954980 complement(4375447..4376007) 1 NC_006155.1 similar to Yersinia pestis YPO0245 DNA-binding protein (99.4% evalue=1.E-108); Salmonella typhimurium STM3403 yrdD; DNA topoisomerase (71.3% evalue=9.E-77); DNA-binding protein 4376007 2954980 YPTB3662 Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_072143.1 4375447 R 273123 CDS YP_072144.1 51597953 2954981 complement(4376027..4376500) 1 NC_006155.1 similar to Yersinia pestis YPO0244 conserved hypothetical protein (100% evalue=2.E-80); Salmonella typhi STY4393 smg; conserved hypothetical protein (71.3% evalue=4.E-61); hypothetical protein 4376500 2954981 YPTB3663 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072144.1 4376027 R 273123 CDS YP_072145.1 51597954 2954982 complement(4376472..4377593) 1 NC_006155.1 similar to Yersinia pestis YPO0243 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs4151 hypothetical protein (54.2% evalue=1.E-107); DNA protecting protein DprA 4377593 2954982 YPTB3664 Yersinia pseudotuberculosis IP 32953 DNA protecting protein DprA YP_072145.1 4376472 R 273123 CDS YP_072146.1 51597955 2955446 4377728..4378240 1 NC_006155.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4378240 def 2955446 def Yersinia pseudotuberculosis IP 32953 peptide deformylase YP_072146.1 4377728 D 273123 CDS YP_072147.1 51597956 2955627 4378265..4379212 1 NC_006155.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 4379212 fmt 2955627 fmt Yersinia pseudotuberculosis IP 32953 methionyl-tRNA formyltransferase YP_072147.1 4378265 D 273123 CDS YP_072148.1 51597957 2954983 4379306..4380595 1 NC_006155.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase GidB 4380595 2954983 YPTB3667 Yersinia pseudotuberculosis IP 32953 16S rRNA methyltransferase GidB YP_072148.1 4379306 D 273123 CDS YP_072149.1 51597958 2956732 4380651..4382027 1 NC_006155.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 4382027 trkA 2956732 trkA Yersinia pseudotuberculosis IP 32953 potassium transporter peripheral membrane protein YP_072149.1 4380651 D 273123 CDS YP_072150.1 51597959 2956085 4382166..4382579 1 NC_006155.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 4382579 mscL 2956085 mscL Yersinia pseudotuberculosis IP 32953 large-conductance mechanosensitive channel YP_072150.1 4382166 D 273123 CDS YP_072151.1 51597960 2954984 complement(4382689..4382889) 1 NC_006155.1 similar to Yersinia pestis YPO0237 conserved hypothetical protein (100% evalue=1.E-32); Escherichia coli JW3253 yhdL; Hypothetical protein (73.6% evalue=5.E-20); hypothetical protein 4382889 2954984 YPTB3670 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072151.1 4382689 R 273123 CDS YP_072152.1 51597961 2954985 complement(4382977..4383402) 1 NC_006155.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 4383402 zntR 2954985 zntR Yersinia pseudotuberculosis IP 32953 zinc-responsive transcriptional regulator YP_072152.1 4382977 R 273123 CDS YP_072153.1 51597962 2956501 complement(4383849..4384238) 1 NC_006155.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 4384238 rplQ 2956501 rplQ Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L17 YP_072153.1 4383849 R 273123 CDS YP_072154.1 51597963 2956520 complement(4384279..4385268) 1 NC_006155.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 4385268 rpoA 2956520 rpoA Yersinia pseudotuberculosis IP 32953 DNA-directed RNA polymerase subunit alpha YP_072154.1 4384279 R 273123 CDS YP_072155.1 51597964 2956533 complement(4385294..4385914) 1 NC_006155.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 4385914 rpsD 2956533 rpsD Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S4 YP_072155.1 4385294 R 273123 CDS YP_072156.1 51597965 2956539 complement(4385945..4386334) 1 NC_006155.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 4386334 rpsK 2956539 rpsK Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S11 YP_072156.1 4385945 R 273123 CDS YP_072157.1 51597966 2956541 complement(4386351..4386707) 1 NC_006155.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 4386707 rpsM 2956541 rpsM Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S13 YP_072157.1 4386351 R 273123 CDS YP_072158.1 51597967 2956519 complement(4386855..4386971) 1 NC_006155.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 4386971 rpmJ 2956519 rpmJ Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L36 YP_072158.1 4386855 R 273123 CDS YP_072159.1 51597968 2956588 complement(4387005..4388336) 1 NC_006155.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4388336 secY 2956588 secY Yersinia pseudotuberculosis IP 32953 preprotein translocase subunit SecY YP_072159.1 4387005 R 273123 CDS YP_072160.1 51597969 2956499 complement(4388344..4388778) 1 NC_006155.1 late assembly protein; 50S ribosomal protein L15 4388778 rplO 2956499 rplO Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L15 YP_072160.1 4388344 R 273123 CDS YP_072161.1 51597970 2956513 complement(4388782..4388961) 1 NC_006155.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 4388961 rpmD 2956513 rpmD Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L30 YP_072161.1 4388782 R 273123 CDS YP_072162.1 51597971 2956534 complement(4388964..4389467) 1 NC_006155.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 4389467 rpsE 2956534 rpsE Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S5 YP_072162.1 4388964 R 273123 CDS YP_072163.1 51597972 2956502 complement(4389482..4389835) 1 NC_006155.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 4389835 rplR 2956502 rplR Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L18 YP_072163.1 4389482 R 273123 CDS YP_072164.1 51597973 2956492 complement(4389845..4390378) 1 NC_006155.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4390378 rplF 2956492 rplF Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L6 YP_072164.1 4389845 R 273123 CDS YP_072165.1 51597974 2956537 complement(4390393..4390785) 1 NC_006155.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 4390785 rpsH 2956537 rpsH Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S8 YP_072165.1 4390393 R 273123 CDS YP_072166.1 51597975 2956542 complement(4390819..4391124) 1 NC_006155.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 4391124 rpsN 2956542 rpsN Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S14 YP_072166.1 4390819 R 273123 CDS YP_072167.1 51597976 2956491 complement(4391138..4391677) 1 NC_006155.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4391677 rplE 2956491 rplE Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L5 YP_072167.1 4391138 R 273123 CDS YP_072168.1 51597977 2956508 complement(4391692..4392006) 1 NC_006155.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 4392006 rplX 2956508 rplX Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L24 YP_072168.1 4391692 R 273123 CDS YP_072169.1 51597978 2956498 complement(4392017..4392388) 1 NC_006155.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 4392388 rplN 2956498 rplN Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L14 YP_072169.1 4392017 R 273123 CDS YP_072170.1 51597979 2956544 complement(4392569..4392823) 1 NC_006155.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 4392823 rpsQ 2956544 rpsQ Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S17 YP_072170.1 4392569 R 273123 CDS YP_072171.1 51597980 2956512 complement(4392823..4393014) 1 NC_006155.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 4393014 rpmC 2956512 rpmC Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L29 YP_072171.1 4392823 R 273123 CDS YP_072172.1 51597981 2956500 complement(4393014..4393424) 1 NC_006155.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4393424 rplP 2956500 rplP Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L16 YP_072172.1 4393014 R 273123 CDS YP_072173.1 51597982 2956532 complement(4393437..4394135) 1 NC_006155.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 4394135 rpsC 2956532 rpsC Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S3 YP_072173.1 4393437 R 273123 CDS YP_072174.1 51597983 2956506 complement(4394153..4394485) 1 NC_006155.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 4394485 rplV 2956506 rplV Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L22 YP_072174.1 4394153 R 273123 CDS YP_072175.1 51597984 2956546 complement(4394500..4394778) 1 NC_006155.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 4394778 rpsS 2956546 rpsS Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S19 YP_072175.1 4394500 R 273123 CDS YP_072176.1 51597985 2956488 complement(4394793..4395617) 1 NC_006155.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4395617 rplB 2956488 rplB Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L2 YP_072176.1 4394793 R 273123 CDS YP_072177.1 51597986 2956507 complement(4395634..4395936) 1 NC_006155.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 4395936 rplW 2956507 rplW Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L23 YP_072177.1 4395634 R 273123 CDS YP_072178.2 161760556 2956490 complement(4395933..4396538) 1 NC_006155.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4396538 rplD 2956490 rplD Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L4 YP_072178.2 4395933 R 273123 CDS YP_072179.1 51597988 2956489 complement(4396555..4397184) 1 NC_006155.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 4397184 rplC 2956489 rplC Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L3 YP_072179.1 4396555 R 273123 CDS YP_072180.1 51597989 2956529 complement(4397217..4397528) 1 NC_006155.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 4397528 rpsJ 2956529 rpsJ Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S10 YP_072180.1 4397217 R 273123 CDS YP_072181.1 51597990 2955281 complement(4397926..4398399) 1 NC_006155.1 iron storage protein; bacterioferritin 4398399 bfr 2955281 bfr Yersinia pseudotuberculosis IP 32953 bacterioferritin YP_072181.1 4397926 R 273123 CDS YP_072182.1 51597991 2955280 complement(4398478..4398684) 1 NC_006155.1 similar to Yersinia pestis YPO0205 bfd; bacterioferritin-associated ferredoxin (100% evalue=2.E-31); Salmonella typhimurium STM3444 bfd; Bacterioferritin-associated ferredoxin (56.2% evalue=8.E-18); bacterioferritin-associated ferredoxin 4398684 bfd 2955280 bfd Yersinia pseudotuberculosis IP 32953 bacterioferritin-associated ferredoxin YP_072182.1 4398478 R 273123 CDS YP_072183.1 51597992 2956843 complement(4398811..4399995) 1 NC_006155.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4399995 tuf 2956843 tuf Yersinia pseudotuberculosis IP 32953 elongation factor Tu YP_072183.1 4398811 R 273123 CDS YP_072184.1 51597993 2955667 complement(4400067..4402175) 1 NC_006155.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4402175 fusA 2955667 fusA Yersinia pseudotuberculosis IP 32953 elongation factor G YP_072184.1 4400067 R 273123 CDS YP_072185.1 51597994 2956536 complement(4402269..4402739) 1 NC_006155.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4402739 rpsG 2956536 rpsG Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S7 YP_072185.1 4402269 R 273123 CDS YP_072186.1 51597995 2956540 complement(4402836..4403210) 1 NC_006155.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4403210 rpsL 2956540 rpsL Yersinia pseudotuberculosis IP 32953 30S ribosomal protein S12 YP_072186.1 4402836 R 273123 CDS YP_072187.1 51597996 2954986 complement(4403348..4403635) 1 NC_006155.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB 4403635 2954986 YPTB3706 Yersinia pseudotuberculosis IP 32953 sulfur transfer complex subunit TusB YP_072187.1 4403348 R 273123 CDS YP_072188.1 51597997 2954987 complement(4403655..4404020) 1 NC_006155.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 4404020 2954987 YPTB3707 Yersinia pseudotuberculosis IP 32953 sulfur relay protein TusC YP_072188.1 4403655 R 273123 CDS YP_072189.1 51597998 2954988 complement(4404020..4404415) 1 NC_006155.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 4404415 2954988 YPTB3708 Yersinia pseudotuberculosis IP 32953 sulfur transfer complex subunit TusD YP_072189.1 4404020 R 273123 CDS YP_072190.1 51597999 2954989 complement(4404415..4405137) 1 NC_006155.1 similar to Yersinia pestis YPO0196 DNA-binding protein (100% evalue=1.E-132); Escherichia coli ECs4197 hypothetical protein (86.6% evalue=1.E-115); DNA-binding protein 4405137 2954989 YPTB3709 Yersinia pseudotuberculosis IP 32953 DNA-binding protein YP_072190.1 4404415 R 273123 CDS YP_072191.1 51598000 2955552 complement(4405391..4406191) 1 NC_006155.1 rotamase; FKBP-type peptidylprolyl isomerase 4406191 fkpA 2955552 fkpA Yersinia pseudotuberculosis IP 32953 FKBP-type peptidylprolyl isomerase YP_072191.1 4405391 R 273123 CDS YP_072192.1 51598001 2954990 4406506..4406724 1 NC_006155.1 similar to Yersinia pestis YPO0194 conserved hypothetical protein (100% evalue=5.E-34); Salmonella typhimurium STM3454 slyX; cytoplasmic protein (69.4% evalue=2.E-22); hypothetical protein 4406724 2954990 YPTB3711 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072192.1 4406506 D 273123 CDS YP_072193.1 51598002 2956612 complement(4406945..4407538) 1 NC_006155.1 rotamase; FKBP-type peptidylprolyl isomerase 4407538 slyD 2956612 slyD Yersinia pseudotuberculosis IP 32953 FKBP-type peptidylprolyl isomerase YP_072193.1 4406945 R 273123 CDS YP_072194.1 51598003 2954991 complement(4407633..4407854) 1 NC_006155.1 similar to Yersinia pestis YPO0192 conserved hypothetical protein (100% evalue=8.E-39); Salmonella typhi STY4342 yheV; conserved hypothetical protein (65% evalue=2.E-20); hypothetical protein 4407854 2954991 YPTB3713 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072194.1 4407633 R 273123 CDS YP_072195.1 51598004 2955926 complement(4407870..4409678) 1 NC_006155.1 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 4409678 kefB 2955926 kefB Yersinia pseudotuberculosis IP 32953 glutathione-regulated potassium-efflux system protein KefB YP_072195.1 4407870 R 273123 CDS YP_072196.1 51598005 2954992 complement(4409682..4410230) 1 NC_006155.1 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 4410230 2954992 YPTB3715 Yersinia pseudotuberculosis IP 32953 glutathione-regulated potassium-efflux system ancillary protein KefG YP_072196.1 4409682 R 273123 CDS YP_072197.1 51598006 2957062 4410481..4412403 1 NC_006155.1 similar to Salmonella typhi STY4339 yheS; probable ABC transporter ATP-binding protein (81.3% evalue=0); Salmonella typhimurium STM3459 yheS; ATPase component of ABC transporter with duplicated ATPase domain (81.5% evalue=0); ABC transporter ATP-binding protein 4412403 yheS 2957062 yheS Yersinia pseudotuberculosis IP 32953 ABC transporter ATP-binding protein YP_072197.1 4410481 D 273123 CDS YP_072198.1 51598007 2954993 4412538..4413527 1 NC_006155.1 similar to Yersinia pestis YPO0187 glycosyl transferase (99.3% evalue=0); Escherichia coli ECs4493 regulator (29.1% evalue=2.E-30); glycosyl transferase family protein 4413527 2954993 YPTB3717 Yersinia pseudotuberculosis IP 32953 glycosyl transferase family protein YP_072198.1 4412538 D 273123 CDS YP_072199.1 51598008 2954994 4413620..4414600 1 NC_006155.1 similar to Yersinia pestis YPO0186 sugar transferase (98.7% evalue=0); Escherichia coli ECs4507 lipopolysaccharide core biosynthesis protein RfaQ (22.3% evalue=1.E-10); sugar transferase 4414600 2954994 YPTB3718 Yersinia pseudotuberculosis IP 32953 sugar transferase YP_072199.1 4413620 D 273123 CDS YP_072200.1 51598009 2956670 complement(4414613..4415461) 1 NC_006155.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase 4415461 tauD 2956670 tauD Yersinia pseudotuberculosis IP 32953 taurine dioxygenase YP_072200.1 4414613 R 273123 CDS YP_072201.1 51598010 2956669 complement(4415458..4416312) 1 NC_006155.1 similar to Yersinia pestis YPO0184 tauC, ssiC; taurine transport system permease (100% evalue=1.E-157); Escherichia coli ECs0421 taurine transport system permease (77.6% evalue=1.E-112); taurine transporter subunit 4416312 tauC 2956669 tauC Yersinia pseudotuberculosis IP 32953 taurine transporter subunit YP_072201.1 4415458 R 273123 CDS YP_072202.1 51598011 2956668 complement(4416309..4417076) 1 NC_006155.1 Part of the ABC transporter complex tauABC involved in taurine import; taurine transporter ATP-binding subunit 4417076 tauB 2956668 tauB Yersinia pseudotuberculosis IP 32953 taurine transporter ATP-binding subunit YP_072202.1 4416309 R 273123 CDS YP_072203.1 51598012 2956666 complement(4417085..4418146) 1 NC_006155.1 with TauB and TauC is responsible for taurine uptake.; taurine ABC transporter substrate-binding protein 4418146 tauA 2956666 tauA Yersinia pseudotuberculosis IP 32953 taurine ABC transporter substrate-binding protein YP_072203.1 4417085 R 273123 CDS YP_072204.1 51598013 2954995 complement(4418349..4418951) 1 NC_006155.1 similar to Yersinia pestis YPO0181 ABC-transport protein (99.5% evalue=1.E-111); Mesorhizobium loti mll1430 hypothetical protein (40.4% evalue=1.E-34); LysE/RhtB family efflux protein 4418951 2954995 YPTB3723 Yersinia pseudotuberculosis IP 32953 LysE/RhtB family efflux protein YP_072204.1 4418349 R 273123 CDS YP_072205.1 51598014 2954996 4419053..4420033 1 NC_006155.1 similar to Yersinia pestis YPO0180 conserved hypothetical protein (100% evalue=0); Escherichia coli b3353 yheT; hypothetical 38.5 kD protein in kifb-prkB intergenic region (69.5% evalue=1.E-134); hydrolase 4420033 2954996 YPTB3724 Yersinia pseudotuberculosis IP 32953 hydrolase YP_072205.1 4419053 D 273123 CDS YP_072206.1 51598015 2954997 4420030..4420266 1 NC_006155.1 similar to Yersinia pestis YPO0179 conserved hypothetical protein (98.7% evalue=2.E-38); Salmonella typhi STY4334 yheU; conserved hypothetical protein (78.5% evalue=7.E-27); hypothetical protein 4420266 2954997 YPTB3725 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072206.1 4420030 D 273123 CDS YP_072207.1 51598016 2956320 4420415..4421284 1 NC_006155.1 similar to Yersinia pestis YPO0178 prk; phosphoribulokinase 1 (100% evalue=1.E-167); Escherichia coli b3355 prkB; probable phosphoribulokinase (phosphopentokinase) (PRK) (86.4% evalue=1.E-146); phosphoribulokinase 1 4421284 prk 2956320 prk Yersinia pseudotuberculosis IP 32953 phosphoribulokinase 1 YP_072207.1 4420415 D 273123 CDS YP_072208.1 51598017 2954998 complement(4421462..4421893) 1 NC_006155.1 similar to Yersinia pestis YPO2790 membrane protein (42.1% evalue=6.E-22); hypothetical protein 4421893 2954998 YPTB3727 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072208.1 4421462 R 273123 CDS YP_072209.1 51598018 2954999 complement(4421965..4422372) 1 NC_006155.1 similar to Yersinia pestis YPO0176 conserved hypothetical protein (100% evalue=1.E-71); Escherichia coli b3356 yhfA; hypothetical 14.5 kD protein in prkB-CRP intergenic region (F134) (86.2% evalue=1.E-59); hypothetical protein 4422372 2954999 YPTB3728 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072209.1 4421965 R 273123 CDS YP_072210.1 51598019 2955362 4422708..4423340 1 NC_006155.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4423340 crp 2955362 crp Yersinia pseudotuberculosis IP 32953 cAMP-regulatory protein YP_072210.1 4422708 D 273123 CDS YP_072211.1 51598020 2955000 4423426..4425546 1 NC_006155.1 similar to Yersinia pestis YPO0174 membrane protein (98.5% evalue=0); Salmonella typhimurium STM3467 yhfK; inner membrane protein (57% evalue=0); efflux transporter (PET) family protein 4425546 2955000 YPTB3730 Yersinia pseudotuberculosis IP 32953 efflux transporter (PET) family protein YP_072211.1 4423426 D 273123 CDS YP_072212.1 51598021 2955001 complement(4425772..4426989) 1 NC_006155.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 4426989 argD 2955001 argD Yersinia pseudotuberculosis IP 32953 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase YP_072212.1 4425772 R 273123 CDS YP_072213.1 51598022 2956203 complement(4427122..4427697) 1 NC_006155.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 4427697 pabA 2956203 pabA Yersinia pseudotuberculosis IP 32953 para-aminobenzoate synthase component II YP_072213.1 4427122 R 273123 CDS YP_072214.1 51598023 2955002 complement(4427941..4429482) 1 NC_006155.1 similar to Yersinia pestis YPO0168 conserved hypothetical protein (99.4% evalue=0); Escherichia coli Z5875 yjgR; orf, hypothetical protein (67.4% evalue=0); hypothetical protein 4429482 2955002 YPTB3733 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072214.1 4427941 R 273123 CDS YP_072215.1 51598024 2956306 complement(4429808..4430377) 1 NC_006155.1 similar to Yersinia pestis YPO0167 ppiA, rotA; peptidyl-prolyl cis-trans isomerase A (100% evalue=1.E-104); Escherichia coli Z4724 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) (79.4% evalue=2.E-83); peptidyl-prolyl cis-trans isomerase A 4430377 ppiA 2956306 ppiA Yersinia pseudotuberculosis IP 32953 peptidyl-prolyl cis-trans isomerase A YP_072215.1 4429808 R 273123 CDS YP_072216.1 51598025 2955003 4430892..4432205 1 NC_006155.1 similar to Yersinia pestis YPO0166 6-phospho-beta-glucosidase, (99.7% evalue=0); Vibrio cholerae VC1284 6-phospho-beta-glucosidase (55.8% evalue=1.E-139); glycosyl hydrolase 4432205 2955003 YPTB3735 Yersinia pseudotuberculosis IP 32953 glycosyl hydrolase YP_072216.1 4430892 D 273123 CDS YP_072217.1 51598026 2955004 4432454..4433440 1 NC_006155.1 similar to Yersinia pestis YPO0165 LacI-family transcriptional regulator (100% evalue=0); Vibrio cholerae VC1286 transcriptional regulator, LacI family (47.2% evalue=2.E-76); LacI family transcriptional regulator 4433440 2955004 YPTB3736 Yersinia pseudotuberculosis IP 32953 LacI family transcriptional regulator YP_072217.1 4432454 D 273123 CDS YP_072218.1 51598027 2955005 complement(4433551..4435596) 1 NC_006155.1 similar to Yersinia pestis YPO0164 membrane receptor protein (98.3% evalue=0); Pseudomonas aeruginosa PA3790 oprC; outer membrane protein OprC (58.8% evalue=0); iron siderophore receptor/tonB dependent transporter 4435596 2955005 YPTB3737 Yersinia pseudotuberculosis IP 32953 iron siderophore receptor/tonB dependent transporter YP_072218.1 4433551 R 273123 CDS YP_072219.1 51598028 2955006 4436082..4437266 1 NC_006155.1 similar to Yersinia pestis YPO0163 conserved integral membrane protein (99.7% evalue=0); Escherichia coli Z4725 yhfC; transport (74.8% evalue=1.E-170); hypothetical protein 4437266 2955006 YPTB3738 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072219.1 4436082 D 273123 CDS YP_072220.1 51598029 2955347 complement(4437351..4438649) 1 NC_006155.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 4438649 codA 2955347 codA Yersinia pseudotuberculosis IP 32953 cytosine deaminase YP_072220.1 4437351 R 273123 CDS YP_072221.1 51598030 2956142 4438971..4441517 1 NC_006155.1 similar to Yersinia pestis YPO0161 nirB; nitrite reductase (99.7% evalue=0); Salmonella typhimurium STM3474 nirB; nitrite reductase, large subunit (84.1% evalue=0); nitrite reductase 4441517 nirB 2956142 nirB Yersinia pseudotuberculosis IP 32953 nitrite reductase YP_072221.1 4438971 D 273123 CDS YP_072222.1 51598031 2956144 4441514..4441840 1 NC_006155.1 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 4441840 nirD 2956144 nirD Yersinia pseudotuberculosis IP 32953 nitrite reductase small subunit YP_072222.1 4441514 D 273123 CDS YP_072223.1 51598032 2956143 4442007..4442813 1 NC_006155.1 member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 4442813 nirC 2956143 nirC Yersinia pseudotuberculosis IP 32953 nitrite transporter NirC YP_072223.1 4442007 D 273123 CDS YP_072224.1 51598033 2955404 4442876..4444297 1 NC_006155.1 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 4444297 cysG 2955404 cysG Yersinia pseudotuberculosis IP 32953 siroheme synthase YP_072224.1 4442876 D 273123 CDS YP_072225.1 51598034 2956833 complement(4444434..4445474) 1 NC_006155.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 4445474 trpS 2956833 trpS Yersinia pseudotuberculosis IP 32953 tryptophanyl-tRNA synthetase YP_072225.1 4444434 R 273123 CDS YP_072226.2 161760555 2955738 complement(4445476..4446174) 1 NC_006155.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 4446174 gph 2955738 gph Yersinia pseudotuberculosis IP 32953 phosphoglycolate phosphatase YP_072226.2 4445476 R 273123 CDS YP_072227.1 51598036 2956482 complement(4446167..4446844) 1 NC_006155.1 similar to Yersinia pestis YPO0155 rpe; ribulose-phosphate 3-epimerase (100% evalue=1.E-125); Escherichia coli b3386 rpe, dod; ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) (87% evalue=1.E-109); ribulose-phosphate 3-epimerase 4446844 rpe 2956482 rpe Yersinia pseudotuberculosis IP 32953 ribulose-phosphate 3-epimerase YP_072227.1 4446167 R 273123 CDS YP_072228.1 51598037 2955425 complement(4447147..4447962) 1 NC_006155.1 similar to Yersinia pestis YPO0154 dam; DNA adenine methylase (100% evalue=1.E-159); Salmonella typhi STY4312 dam; DNA adenine methylase (70% evalue=1.E-109); DNA adenine methylase 4447962 dam 2955425 dam Yersinia pseudotuberculosis IP 32953 DNA adenine methylase YP_072228.1 4447147 R 273123 CDS YP_072229.1 51598038 2955007 complement(4448046..4449035) 1 NC_006155.1 similar to Yersinia pestis YPO0153 conserved hypothetical membrane protein (99.3% evalue=0); Escherichia coli ECs4230 membrane protein DamX (40.8% evalue=5.E-60); hypothetical protein 4449035 2955007 YPTB3748 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072229.1 4448046 R 273123 CDS YP_072230.1 51598039 2955222 complement(4449289..4450377) 1 NC_006155.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 4450377 aroB 2955222 aroB Yersinia pseudotuberculosis IP 32953 3-dehydroquinate synthase YP_072230.1 4449289 R 273123 CDS YP_072231.1 51598040 2955228 complement(4450434..4450955) 1 NC_006155.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 4450955 aroK 2955228 aroK Yersinia pseudotuberculosis IP 32953 shikimate kinase I YP_072231.1 4450434 R 273123 CDS YP_072232.2 229310101 2955008 complement(4451304..4452428) 1 NC_006155.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; porin 4452428 hofQ 2955008 hofQ Yersinia pseudotuberculosis IP 32953 porin YP_072232.2 4451304 R 273123 CDS YP_072233.1 51598042 2955009 complement(4452870..4453280) 1 NC_006155.1 similar to Yersinia pestis YPO0149 membrane protein (99.1% evalue=2.E-66); hypothetical protein 4453280 2955009 YPTB3752 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072233.1 4452870 R 273123 CDS YP_072234.1 51598043 2955010 complement(4453264..4453845) 1 NC_006155.1 similar to Yersinia pestis YPO0148 membrane protein (98.9% evalue=1.E-108); hypothetical protein 4453845 2955010 YPTB3753 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072234.1 4453264 R 273123 CDS YP_072235.1 51598044 2955011 complement(4453838..4454443) 1 NC_006155.1 similar to Yersinia pestis YPO0147 membrane protein (99% evalue=1.E-113); Escherichia coli Z4748 yrfC; orf, hypothetical protein (28.3% evalue=1.E-10); hypothetical protein 4454443 2955011 YPTB3754 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072235.1 4453838 R 273123 CDS YP_072236.1 51598045 2955012 complement(4454443..4455339) 1 NC_006155.1 similar to Yersinia pestis YPO0146 hypothetical protein (98.3% evalue=1.E-168); Salmonella typhi STY4304 yrfD; conserved hypothetical protein (25.3% evalue=1.E-17); hypothetical protein 4455339 2955012 YPTB3755 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072236.1 4454443 R 273123 CDS YP_072237.3 229310100 2956077 4455459..4458014 1 NC_006155.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 4458014 mrcA 2956077 mrcA Yersinia pseudotuberculosis IP 32953 peptidoglycan synthetase YP_072237.3 4455459 D 273123 CDS YP_072238.1 51598047 2955013 complement(4458151..4458696) 1 NC_006155.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 4458696 nudE 2955013 nudE Yersinia pseudotuberculosis IP 32953 ADP-ribose diphosphatase NudE YP_072238.1 4458151 R 273123 CDS YP_072239.1 51598048 2955014 4459529..4461676 1 NC_006155.1 similar to Yersinia pestis YPO0142 membrane protein (99.7% evalue=0); Escherichia coli JW3361 yrfF; Hypothetical protein (53.4% evalue=0); hypothetical protein 4461676 2955014 YPTB3758 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072239.1 4459529 D 273123 CDS YP_072240.1 51598049 2955015 4461820..4462500 1 NC_006155.1 similar to Yersinia pestis YPO0141 conserved hypothetical protein (100% evalue=1.E-133); Escherichia coli JW3362 yrfG; Hypothetical protein (68.3% evalue=3.E-87); hypothetical protein 4462500 2955015 YPTB3759 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072240.1 4461820 D 273123 CDS YP_072241.1 51598050 2955841 4462529..4462936 1 NC_006155.1 similar to Yersinia pestis YPO0140 hslR; heat shock protein 15 (100% evalue=2.E-73); Escherichia coli JW3363 hslR; Hsp15. DNA/RNA binding heat shock protein (73.3% evalue=5.E-52); heat shock protein 15 4462936 hslR 2955841 hslR Yersinia pseudotuberculosis IP 32953 heat shock protein 15 YP_072241.1 4462529 D 273123 CDS YP_072242.1 51598051 2955840 4463099..4463980 1 NC_006155.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 4463980 hslO 2955840 hslO Yersinia pseudotuberculosis IP 32953 heat shock protein 33 YP_072242.1 4463099 D 273123 CDS YP_072243.1 51598052 2956216 4464177..4465796 1 NC_006155.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4465796 pckA 2956216 pckA Yersinia pseudotuberculosis IP 32953 phosphoenolpyruvate carboxykinase YP_072243.1 4464177 D 273123 CDS YP_072244.1 51598053 2955508 complement(4466115..4467467) 1 NC_006155.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 4467467 envZ 2955508 envZ Yersinia pseudotuberculosis IP 32953 osmolarity sensor protein YP_072244.1 4466115 R 273123 CDS YP_072245.1 51598054 2956191 complement(4467464..4468183) 1 NC_006155.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 4468183 ompR 2956191 ompR Yersinia pseudotuberculosis IP 32953 osmolarity response regulator YP_072245.1 4467464 R 273123 CDS YP_072246.1 51598055 2955744 complement(4468319..4468834) 1 NC_006155.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 4468834 greB 2955744 greB Yersinia pseudotuberculosis IP 32953 transcription elongation factor GreB YP_072246.1 4468319 R 273123 CDS YP_072247.1 51598056 2955016 4469353..4471728 1 NC_006155.1 similar to Yersinia pestis YPO0134 conserved hypothetical protein (99.8% evalue=0); Escherichia coli JW3370 yhgF; Hypothetical protein (82.8% evalue=0); hypothetical protein 4471728 2955016 YPTB3766 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072247.1 4469353 D 273123 CDS YP_072248.1 51598057 2955542 4472252..4472479 1 NC_006155.1 similar to Yersinia pestis YPO0133 feoA; hypothetical ferrous iron transport protein A (100% evalue=4.E-36); Escherichia coli b3408 feoA; ferrous iron transport protein A (77.4% evalue=4.E-24); ferrous iron transport protein A 4472479 feoA 2955542 feoA Yersinia pseudotuberculosis IP 32953 ferrous iron transport protein A YP_072248.1 4472252 D 273123 CDS YP_072249.1 51598058 2955543 4472571..4474886 1 NC_006155.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 4474886 feoB 2955543 feoB Yersinia pseudotuberculosis IP 32953 ferrous iron transport protein B YP_072249.1 4472571 D 273123 CDS YP_072250.1 51598059 2955017 4474922..4475179 1 NC_006155.1 similar to Yersinia pestis YPO0131 conserved hypothetical protein (100% evalue=8.E-44); Escherichia coli b3410 yhgG; hypothetical 8.7 kD protein in feoB-bioH intergenic region (O78) (58.2% evalue=4.E-17); hypothetical protein 4475179 2955017 YPTB3769 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072250.1 4474922 D 273123 CDS YP_072251.1 51598060 2955018 complement(4475331..4475600) 1 NC_006155.1 similar to Yersinia pestis YPO0130 exported protein (100% evalue=5.E-43); Salmonella typhi STY0095 probable secreted protein (46.5% evalue=1.E-13); hypothetical protein 4475600 2955018 YPTB3770 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072251.1 4475331 R 273123 CDS YP_072252.1 51598061 2955291 complement(4475770..4476546) 1 NC_006155.1 similar to Yersinia pestis YPO0129 bioH; biotin biosynthesis protein (99.2% evalue=1.E-149); Salmonella typhi STY4287 bioH; biotin biosynthesis protein (67.2% evalue=4.E-99); biotin biosynthesis protein 4476546 bioH 2955291 bioH Yersinia pseudotuberculosis IP 32953 biotin biosynthesis protein YP_072252.1 4475770 R 273123 CDS YP_072253.1 51598062 2955019 4476633..4477334 1 NC_006155.1 involved in high-affinity gluconate transport; gluconate periplasmic binding protein 4477334 2955019 YPTB3772 Yersinia pseudotuberculosis IP 32953 gluconate periplasmic binding protein YP_072253.1 4476633 D 273123 CDS YP_072254.1 51598063 2955020 4477394..4477969 1 NC_006155.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 4477969 2955020 YPTB3773 Yersinia pseudotuberculosis IP 32953 DNA uptake protein YP_072254.1 4477394 D 273123 CDS YP_072255.1 51598064 2955989 complement(4478154..4480250) 1 NC_006155.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 4480250 malQ 2955989 malQ Yersinia pseudotuberculosis IP 32953 4-alpha-glucanotransferase YP_072255.1 4478154 R 273123 CDS YP_072256.1 51598065 2955021 complement(4480263..4482668) 1 NC_006155.1 similar to Salmonella typhi STY4282 malP; maltodextrin phosphorylase (75.5% evalue=0); Salmonella typhimurium STM3514 malP; maltodextrin phosphorylase (76% evalue=0); maltodextrin phosphorylase 4482668 2955021 YPTB3775 Yersinia pseudotuberculosis IP 32953 maltodextrin phosphorylase YP_072256.1 4480263 R 273123 CDS YP_072257.1 51598066 2955991 4482986..4485697 1 NC_006155.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 4485697 malT 2955991 malT Yersinia pseudotuberculosis IP 32953 transcriptional regulator MalT YP_072257.1 4482986 D 273123 CDS YP_072258.1 51598067 2955022 4486072..4486401 1 NC_006155.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase 4486401 glpE 2955022 glpE Yersinia pseudotuberculosis IP 32953 thiosulfate sulfurtransferase YP_072258.1 4486072 D 273123 CDS YP_072259.1 51598068 2955711 4486419..4487255 1 NC_006155.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 4487255 glpG 2955711 glpG Yersinia pseudotuberculosis IP 32953 intramembrane serine protease GlpG YP_072259.1 4486419 D 273123 CDS YP_072260.1 51598069 2955714 4487290..4488048 1 NC_006155.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 4488048 glpR 2955714 glpR Yersinia pseudotuberculosis IP 32953 DNA-binding transcriptional repressor GlpR YP_072260.1 4487290 D 273123 CDS YP_072261.1 51598070 2955023 complement(4488517..4488948) 1 NC_006155.1 similar to Yersinia pestis YPO3934 hypothetical protein (97.2% evalue=2.E-80); hypothetical protein 4488948 2955023 YPTB3780 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072261.1 4488517 R 273123 CDS YP_072262.1 51598071 2955024 complement(4488951..4489415) 1 NC_006155.1 similar to Yersinia pestis YPO3935 membrane protein (99.3% evalue=2.E-88); hypothetical protein 4489415 2955024 YPTB3781 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072262.1 4488951 R 273123 CDS YP_072263.1 51598072 2955709 4490501..4492015 1 NC_006155.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4492015 glpD 2955709 glpD Yersinia pseudotuberculosis IP 32953 glycerol-3-phosphate dehydrogenase YP_072263.1 4490501 D 273123 CDS YP_072264.1 51598073 2955690 complement(4492177..4494624) 1 NC_006155.1 similar to Yersinia pestis YPO3938 glgP, glgY; glycogen phosphorylase (99.8% evalue=0); Salmonella typhimurium STM3534 glgP; glycogen phosphorylase (80.8% evalue=0); glycogen phosphorylase 4494624 glgP 2955690 glgP Yersinia pseudotuberculosis IP 32953 glycogen phosphorylase YP_072264.1 4492177 R 273123 CDS YP_072265.1 51598074 2955687 complement(4494841..4496271) 1 NC_006155.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 4496271 glgA 2955687 glgA Yersinia pseudotuberculosis IP 32953 glycogen synthase YP_072265.1 4494841 R 273123 CDS YP_072266.1 51598075 2955689 complement(4496482..4497768) 1 NC_006155.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 4497768 glgC 2955689 glgC Yersinia pseudotuberculosis IP 32953 glucose-1-phosphate adenylyltransferase YP_072266.1 4496482 R 273123 CDS YP_072267.1 51598076 2955691 complement(4497778..4499766) 1 NC_006155.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein 4499766 glgX 2955691 glgX Yersinia pseudotuberculosis IP 32953 glycogen debranching protein YP_072267.1 4497778 R 273123 CDS YP_072268.1 51598077 2955688 complement(4499768..4501951) 1 NC_006155.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 4501951 glgB 2955688 glgB Yersinia pseudotuberculosis IP 32953 glycogen branching protein YP_072268.1 4499768 R 273123 CDS YP_072269.1 51598078 2955025 4502457..4504154 1 NC_006155.1 similar to Yersinia pestis YPO3943 membrane protein (99.1% evalue=0); Escherichia coli JW2114 yehU, yehV; Hypothetical protein (67.3% evalue=0); hypothetical protein 4504154 2955025 YPTB3788 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072269.1 4502457 D 273123 CDS YP_072270.1 51598079 2955026 complement(4504366..4521237) 1 NC_006155.1 similar to Yersinia pestis YPO3944 invasin (76.3% evalue=0); Ig-like domain-containing protein 4521237 2955026 YPTB3789 Yersinia pseudotuberculosis IP 32953 Ig-like domain-containing protein YP_072270.1 4504366 R 273123 CDS YP_072271.1 51598080 2955240 complement(4522526..4523629) 1 NC_006155.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 4523629 asd 2955240 asd Yersinia pseudotuberculosis IP 32953 aspartate-semialdehyde dehydrogenase YP_072271.1 4522526 R 273123 CDS YP_072272.1 51598081 2957064 4523987..4524580 1 NC_006155.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 4524580 yhgN 2957064 yhgN Yersinia pseudotuberculosis IP 32953 dITP- and XTP- hydrolase YP_072272.1 4523987 D 273123 CDS YP_072273.1 51598082 2955027 complement(4524765..4525154) 1 NC_006155.1 similar to Yersinia pestis YPO3951 hypothetical protein (96.8% evalue=3.E-69); Pseudomonas aeruginosa PA0092 hypothetical protein (36.2% evalue=1.E-09); hypothetical protein 4525154 2955027 YPTB3792 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072273.1 4524765 R 273123 CDS YP_072274.1 51598083 2955028 complement(4525260..4525652) 1 NC_006155.1 similar to Yersinia pestis YPO3951 hypothetical protein (75.3% evalue=3.E-53); Pseudomonas aeruginosa PA0092 hypothetical protein (35.2% evalue=8.E-10); hypothetical protein 4525652 2955028 YPTB3793 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072274.1 4525260 R 273123 CDS YP_072275.1 51598084 2955029 complement(4525759..4526148) 1 NC_006155.1 similar to Yersinia pestis YPO3951 hypothetical protein (76.7% evalue=8.E-56); Pseudomonas aeruginosa PA0092 hypothetical protein (34.3% evalue=2.E-09); hypothetical protein 4526148 2955029 YPTB3794 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072275.1 4525759 R 273123 CDS YP_072276.1 51598085 2955030 complement(4526145..4527395) 1 NC_006155.1 similar to Yersinia pestis YPO1258 conserved hypothetical protein (60.7% evalue=1.E-73); hypothetical protein 4527395 2955030 YPTB3795 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072276.1 4526145 R 273123 CDS YP_072277.1 51598086 2955031 complement(4527730..4528233) 1 NC_006155.1 similar to Yersinia pestis YPO3953 gluconokinase (100% evalue=4.E-93); gluconokinase 4528233 2955031 YPTB3796 Yersinia pseudotuberculosis IP 32953 gluconokinase YP_072277.1 4527730 R 273123 CDS YP_072278.1 51598087 2955735 4528450..4529766 1 NC_006155.1 similar to Yersinia pestis YPO3954 gntT, usgA, gntM; gluconate permease (99.7% evalue=0); Escherichia coli ECs4257 high-affinity transport of gluconate / gluconate permease (85.1% evalue=0); indonate/gluconate permease 4529766 gntT 2955735 gntT Yersinia pseudotuberculosis IP 32953 indonate/gluconate permease YP_072278.1 4528450 D 273123 CDS YP_072279.1 51598088 2955734 complement(4529858..4530853) 1 NC_006155.1 similar to Yersinia pestis YPO3955 gntR; gluconate utilization system Gnt-I transcriptional repressor (99.6% evalue=0); Salmonella typhimurium STM3543 gntR; transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) (80% evalue=1.E-151); gluconate utilization system Gnt-I transcriptional repressor 4530853 gntR 2955734 gntR Yersinia pseudotuberculosis IP 32953 gluconate utilization system Gnt-I transcriptional repressor YP_072279.1 4529858 R 273123 CDS YP_072280.1 51598089 2955032 complement(4530961..4531656) 1 NC_006155.1 similar to Yersinia pestis YPO3956 conserved hypothetical protein (100% evalue=1.E-136); Salmonella typhimurium STM3544 yhhW; cytoplasmic protein (77.9% evalue=1.E-105); hypothetical protein 4531656 2955032 YPTB3799 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072280.1 4530961 R 273123 CDS YP_072281.1 51598090 2955033 4532150..4532419 1 NC_006155.1 similar to Yersinia pestis YPO3957 hypothetical protein, 99% identical; hypothetical protein 4532419 2955033 YPTB3800 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072281.1 4532150 D 273123 CDS YP_072282.1 51598091 2955034 4532419..4533138 1 NC_006155.1 similar to Yersinia pestis YPO3958 response regulator protein (97.5% evalue=1.E-128); Escherichia coli ECs5067 regulatory protein (72% evalue=3.E-93); response regulator protein 4533138 2955034 YPTB3801 Yersinia pseudotuberculosis IP 32953 response regulator protein YP_072282.1 4532419 D 273123 CDS YP_072283.1 51598092 2955035 complement(4533213..4534220) 1 NC_006155.1 similar to Yersinia pestis YPO3959 PfkB family carbohydrate kinase (99.7% evalue=0); Escherichia coli Z5686 kinase (79.5% evalue=1.E-147); PfkB family carbohydrate kinase 4534220 2955035 YPTB3802 Yersinia pseudotuberculosis IP 32953 PfkB family carbohydrate kinase YP_072283.1 4533213 R 273123 CDS YP_072284.1 51598093 2955036 complement(4534230..4535090) 1 NC_006155.1 similar to Yersinia pestis YPO3960 class-II fructose-bisphosphate aldolase (100% evalue=1.E-159); Escherichia coli ECs5069 fructose-bisphosphate aldolase (84.9% evalue=1.E-135); hypothetical protein 4535090 2955036 YPTB3803 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072284.1 4534230 R 273123 CDS YP_072285.1 51598094 2955037 complement(4535116..4535799) 1 NC_006155.1 similar to Yersinia pestis YPO3961 hypothetical protein (99.5% evalue=1.E-136); Escherichia coli Z5688 hypothetical protein (73% evalue=1.E-101); hypothetical protein 4535799 2955037 YPTB3804 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072285.1 4535116 R 273123 CDS YP_072286.1 51598095 2955038 complement(4535874..4536818) 1 NC_006155.1 similar to Yersinia pestis YPO3962 sugar-binding transport protein (100% evalue=1.E-173); Escherichia coli Z5689 periplasmic ribose-binding protein of ABC transport system (87.5% evalue=1.E-154); ribose ABC transporter substrate-binding protein 4536818 2955038 YPTB3805 Yersinia pseudotuberculosis IP 32953 ribose ABC transporter substrate-binding protein YP_072286.1 4535874 R 273123 CDS YP_072287.1 51598096 2955039 complement(4536849..4537841) 1 NC_006155.1 similar to Yersinia pestis YPO3963 sugar transport system permease (100% evalue=0); Escherichia coli Z5690 permease of ribose ABC transport system (89.2% evalue=1.E-157); ribose ABC transporter permease 4537841 2955039 YPTB3806 Yersinia pseudotuberculosis IP 32953 ribose ABC transporter permease YP_072287.1 4536849 R 273123 CDS YP_072288.1 51598097 2955040 complement(4537834..4539357) 1 NC_006155.1 similar to Yersinia pestis YPO3964 sugar transport ATP-binding protein (99.8% evalue=0); Escherichia coli ECs5073 ATP-binding component of sugar ABC transporter (85.3% evalue=0); ribose ABC transporter ATPase 4539357 2955040 YPTB3807 Yersinia pseudotuberculosis IP 32953 ribose ABC transporter ATPase YP_072288.1 4537834 R 273123 CDS YP_072289.1 51598098 2955041 4539546..4542101 1 NC_006155.1 similar to Yersinia pestis YPO3965 hybrid two-component system regulatory protein (99.6% evalue=0); Escherichia coli ECs5074 histidine protein kinase (71.9% evalue=1.E-141); hybrid two-component system regulatory protein 4542101 2955041 YPTB3808 Yersinia pseudotuberculosis IP 32953 hybrid two-component system regulatory protein YP_072289.1 4539546 D 273123 CDS YP_072290.1 51598099 2955042 complement(4542237..4543433) 1 NC_006155.1 similar to Yersinia pestis YPO3966 conserved hypothetical protein (99.4% evalue=0); Escherichia coli ECs4364 hypothetical protein (78.8% evalue=0); hypothetical protein 4543433 2955042 YPTB3809 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072290.1 4542237 R 273123 CDS YP_072291.1 51598100 2956274 4543744..4545240 1 NC_006155.1 similar to Yersinia pestis YPO3967 phosphate transport protein (99.5% evalue=0); Escherichia coli ECs4365 low-affinity phosphate transport (75.5% evalue=0); inorganic phosphate transporter 4545240 pitA 2956274 pitA Yersinia pseudotuberculosis IP 32953 inorganic phosphate transporter YP_072291.1 4543744 D 273123 CDS YP_072292.1 51598101 2956879 complement(4545387..4545722) 1 NC_006155.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 4545722 uspB 2956879 uspB Yersinia pseudotuberculosis IP 32953 universal stress protein UspB YP_072292.1 4545387 R 273123 CDS YP_072293.1 51598102 2956878 4546447..4546893 1 NC_006155.1 similar to Yersinia pestis YPO3970 uspA; universal stress protein A (100% evalue=3.E-80); Escherichia coli ECs4367 universal stress protein UspA (93.7% evalue=6.E-73); universal stress protein A 4546893 uspA 2956878 uspA Yersinia pseudotuberculosis IP 32953 universal stress protein A YP_072293.1 4546447 D 273123 CDS YP_072294.1 51598103 2955683 4547140..4548483 1 NC_006155.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 4548483 gdhA 2955683 gdhA Yersinia pseudotuberculosis IP 32953 glutamate dehydrogenase YP_072294.1 4547140 D 273123 CDS YP_072295.1 51598104 2955043 4548727..4550064 1 NC_006155.1 similar to Yersinia pestis YPO3973 metalloprotease (97.9% evalue=0); Pseudomonas aeruginosa PA1249 aprA; alkaline metalloproteinase precursor (47.3% evalue=1.E-80); metalloprotease 4550064 2955043 YPTB3814 Yersinia pseudotuberculosis IP 32953 metalloprotease YP_072295.1 4548727 D 273123 CDS YP_072296.1 51598105 2955044 complement(4550129..4550899) 1 NC_006155.1 predicted SAM-dependent methyltransferase; methyltransferase 4550899 2955044 YPTB3815 Yersinia pseudotuberculosis IP 32953 methyltransferase YP_072296.1 4550129 R 273123 CDS YP_072297.1 51598106 2956194 complement(4550903..4552945) 1 NC_006155.1 similar to Yersinia pestis YPO3975 opdA, prlC; oligopeptidase A (99.5% evalue=0); Escherichia coli b3498 prlC, opdA; oligopeptidase A (80.5% evalue=0); oligopeptidase A 4552945 opdA 2956194 opdA Yersinia pseudotuberculosis IP 32953 oligopeptidase A YP_072297.1 4550903 R 273123 CDS YP_072298.1 51598107 2955045 4553274..4554116 1 NC_006155.1 similar to Yersinia pestis YPO3976 conserved hypothetical protein (98.9% evalue=1.E-163); Salmonella typhi STY4206 conserved hypothetical protein (80.3% evalue=1.E-136); hypothetical protein 4554116 2955045 YPTB3817 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072298.1 4553274 D 273123 CDS YP_072299.1 51598108 2955737 4554269..4555636 1 NC_006155.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 4555636 gor 2955737 gor Yersinia pseudotuberculosis IP 32953 glutathione reductase YP_072299.1 4554269 D 273123 CDS YP_072300.1 51598109 2955046 4555907..4557034 1 NC_006155.1 similar to Yersinia pestis YPO3978 regulatory protein (97.8% evalue=0); H. influenzae HI0093 hypothetical protein HI0093 (39.2% evalue=2.E-59); regulatory protein 4557034 2955046 YPTB3819 Yersinia pseudotuberculosis IP 32953 regulatory protein YP_072300.1 4555907 D 273123 CDS YP_072301.1 51598110 2955047 4557212..4558480 1 NC_006155.1 similar to Yersinia pestis YPO3979 GntP family permease (99.2% evalue=0); Salmonella typhi STY2731 permease (76.3% evalue=0); GntP family symporter 4558480 2955047 YPTB3820 Yersinia pseudotuberculosis IP 32953 GntP family symporter YP_072301.1 4557212 D 273123 CDS YP_072302.1 51598111 2955726 4558491..4559627 1 NC_006155.1 similar to Yersinia pestis YPO3980 glxK; glycerate kinase (99.2% evalue=0); Salmonella typhi STY2730 glycerate kinase (67.6% evalue=1.E-141); glycerate kinase 4559627 glxK 2955726 glxK Yersinia pseudotuberculosis IP 32953 glycerate kinase YP_072302.1 4558491 D 273123 CDS YP_072303.1 51598112 2955048 complement(4559873..4560373) 1 NC_006155.1 similar to Yersinia pestis YPO3982 hypothetical protein (64.4% evalue=3.E-63); hypothetical protein 4560373 2955048 YPTB3822 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072303.1 4559873 R 273123 CDS YP_072304.1 51598113 2955049 complement(4560360..4561244) 1 NC_006155.1 similar to Yersinia pestis YPO3983 conserved hypothetical protein (83.6% evalue=1.E-142); Xylella fastidiosa XF0155 hypothetical protein (42.5% evalue=2.E-59); hypothetical protein 4561244 2955049 YPTB3823 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072304.1 4560360 R 273123 CDS YP_072305.1 51598114 2956949 complement(4561332..4564544) 1 NC_006155.1 similar to Yersinia pestis YPO3984 yapE; autotransporter protein (97.3% evalue=0); Agrobacterium tumefaciens AGR_pAT_511 BapA protein (24.3% evalue=2.E-46); pertactin family virulence factor/autotransporter 4564544 yapE 2956949 yapE Yersinia pseudotuberculosis IP 32953 pertactin family virulence factor/autotransporter YP_072305.1 4561332 R 273123 CDS YP_072306.1 51598115 2955050 4565222..4566304 1 NC_006155.1 similar to Yersinia pestis YPO3985 membrane protein (98.6% evalue=0); Escherichia coli Z4935 yhjD; orf, hypothetical protein (69.8% evalue=1.E-121); hypothetical protein 4566304 2955050 YPTB3825 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072306.1 4565222 D 273123 CDS YP_072307.1 51598116 2955315 4566308..4567105 1 NC_006155.1 similar to Yersinia pestis YPO3986 cdh; CDP-diacylglycerol pyrophosphatase (97.6% evalue=1.E-146); Escherichia coli JW3889 cdh; CDP diacylglycerol pyrophosphatase (version 1) (51.6% evalue=3.E-69); CDP-diacylglycerol pyrophosphatase 4567105 cdh 2955315 cdh Yersinia pseudotuberculosis IP 32953 CDP-diacylglycerol pyrophosphatase YP_072307.1 4566308 D 273123 CDS YP_072308.1 51598117 2955051 complement(4567110..4569323) 1 NC_006155.1 similar to Yersinia pestis YPO3987 exported protein (96.1% evalue=0); Pseudomonas aeruginosa PA4879 conserved hypothetical protein (50.7% evalue=0); hypothetical protein 4569323 2955051 YPTB3827 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072308.1 4567110 R 273123 CDS YP_072309.1 51598118 2955052 complement(4569628..4570473) 1 NC_006155.1 in Escherichia coli this protein is involved in flagellar function; diguanylate phosphodiesterase 4570473 2955052 YPTB3828 Yersinia pseudotuberculosis IP 32953 diguanylate phosphodiesterase YP_072309.1 4569628 R 273123 CDS YP_072310.1 51598119 2955053 4570557..4570892 1 NC_006155.1 similar to Yersinia pestis YPO3989 tautomerase (100% evalue=4.E-31); Neisseria meningitidis_A NMA1685 tautomerase (68.1% evalue=5.E-19); tautomerase enzyme 4570892 2955053 YPTB3829 Yersinia pseudotuberculosis IP 32953 tautomerase enzyme YP_072310.1 4570557 D 273123 CDS YP_072311.1 51598120 2955911 4571171..4572115 1 NC_006155.1 similar to Yersinia pestis YPO3990 kdgK; 2-dehydro-3-deoxygluconokinase (99.6% evalue=1.E-179); Salmonella typhimurium STM3612 kdgK; ketodeoxygluconokinase (74.5% evalue=1.E-131); 2-dehydro-3-deoxygluconokinase 4572115 kdgK 2955911 kdgK Yersinia pseudotuberculosis IP 32953 2-dehydro-3-deoxygluconokinase YP_072311.1 4571171 D 273123 CDS YP_072312.1 51598121 2955054 complement(4572279..4573778) 1 NC_006155.1 similar to Yersinia pestis YPO3991 insulinase family protease (100% evalue=0); Escherichia coli JW3495 yhjJ; Hypothetical protein (62.1% evalue=1.E-178); insulinase family protease 4573778 2955054 YPTB3831 Yersinia pseudotuberculosis IP 32953 insulinase family protease YP_072312.1 4572279 R 273123 CDS YP_072313.1 51598122 2955434 complement(4574143..4575432) 1 NC_006155.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4575432 dctA 2955434 dctA Yersinia pseudotuberculosis IP 32953 C4-dicarboxylate transporter DctA YP_072313.1 4574143 R 273123 CDS YP_072314.1 51598123 2955055 complement(4575904..4576410) 1 NC_006155.1 similar to Yersinia pestis YPO3993 exported protein (99.3% evalue=2.E-85); hypothetical protein 4576410 2955055 YPTB3833 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072314.1 4575904 R 273123 CDS YP_072315.1 51598124 2956229 complement(4576508..4578226) 1 NC_006155.1 similar to Yersinia pestis YPO3994 pelY; periplasmic pectate lyase precursor (100% evalue=0); periplasmic pectate lyase 4578226 pelY 2956229 pelY Yersinia pseudotuberculosis IP 32953 periplasmic pectate lyase YP_072315.1 4576508 R 273123 CDS YP_072316.1 51598125 2955056 complement(4578472..4579176) 1 NC_006155.1 similar to Yersinia pestis YPO3995 exported protein (100% evalue=1.E-134); KdgM family oligogalacturonate specific porin 4579176 2955056 YPTB3835 Yersinia pseudotuberculosis IP 32953 KdgM family oligogalacturonate specific porin YP_072316.1 4578472 R 273123 CDS YP_072317.1 51598126 2957069 complement(4579817..4582003) 1 NC_006155.1 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; biofilm formation regulator HmsP 4582003 yhjK 2957069 yhjK Yersinia pseudotuberculosis IP 32953 biofilm formation regulator HmsP YP_072317.1 4579817 R 273123 CDS YP_072318.1 51598127 2955057 complement(4582146..4583261) 1 NC_006155.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 4583261 2955057 YPTB3837 Yersinia pseudotuberculosis IP 32953 endo-1,4-D-glucanase YP_072318.1 4582146 R 273123 CDS YP_072319.1 51598128 2955483 complement(4583379..4584455) 1 NC_006155.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 4584455 dppF 2955483 dppF Yersinia pseudotuberculosis IP 32953 dipeptide transporter ATP-binding subunit YP_072319.1 4583379 R 273123 CDS YP_072320.2 161760553 2955482 complement(4584452..4585432) 1 NC_006155.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 4585432 dppD 2955482 dppD Yersinia pseudotuberculosis IP 32953 dipeptide transporter ATP-binding subunit YP_072320.2 4584452 R 273123 CDS YP_072321.1 51598130 2955481 complement(4585446..4586348) 1 NC_006155.1 similar to Yersinia pestis YPO4001 dppC; dipeptide transport system permease (100% evalue=1.E-168); Salmonella typhimurium STM3628 dppC; ABC superfamily (membrane), dipeptide transport protein 2 (87.3% evalue=1.E-150); dipeptide transporter 4586348 dppC 2955481 dppC Yersinia pseudotuberculosis IP 32953 dipeptide transporter YP_072321.1 4585446 R 273123 CDS YP_072322.1 51598131 2955480 complement(4586359..4587378) 1 NC_006155.1 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 4587378 dppB 2955480 dppB Yersinia pseudotuberculosis IP 32953 dipeptide transporter permease DppB YP_072322.1 4586359 R 273123 CDS YP_072323.1 51598132 2955479 complement(4587661..4589268) 1 NC_006155.1 similar to Yersinia pestis YPO4003 dppA; periplasmic dipeptide transport protein (99.8% evalue=0); Salmonella typhi STY4168 dppA; periplasmic dipeptide transport protein precursor (85.9% evalue=0); dipeptide ABC transporter substrate-binding protein 4589268 dppA 2955479 dppA Yersinia pseudotuberculosis IP 32953 dipeptide ABC transporter substrate-binding protein YP_072323.1 4587661 R 273123 CDS YP_072324.1 51598133 2955058 complement(4589937..4591700) 1 NC_006155.1 similar to Yersinia pestis YPO4005 hemolysin activator protein (98.9% evalue=0); TPS family hemolysin activator/secretion protein 4591700 2955058 YPTB3843 Yersinia pseudotuberculosis IP 32953 TPS family hemolysin activator/secretion protein YP_072324.1 4589937 R 273123 CDS YP_072325.1 51598134 2955059 complement(4591809..4593200) 1 NC_006155.1 similar to Yersinia pestis YPO4006 exported protein (99.5% evalue=0); hemagglutinin/hemolysin-related protein 4593200 2955059 YPTB3844 Yersinia pseudotuberculosis IP 32953 hemagglutinin/hemolysin-related protein YP_072325.1 4591809 R 273123 CDS YP_072326.1 51598135 2956866 complement(4593705..4595036) 1 NC_006155.1 membrane protein regulates uhpT expression; regulatory protein UhpC 4595036 uhpC 2956866 uhpC Yersinia pseudotuberculosis IP 32953 regulatory protein UhpC YP_072326.1 4593705 R 273123 CDS YP_072327.1 51598136 2956865 complement(4595131..4596660) 1 NC_006155.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB 4596660 uhpB 2956865 uhpB Yersinia pseudotuberculosis IP 32953 sensory histidine kinase UhpB YP_072327.1 4595131 R 273123 CDS YP_072328.1 51598137 2956864 complement(4596657..4597247) 1 NC_006155.1 similar to Yersinia pestis YPO4012 uhpA; two-component system response regulator (100% evalue=1.E-105); Escherichia coli Z5159 uhpA; response regulator, positive activator of uhpT transcription (sensor, uhpB) (66.4% evalue=6.E-67); two-component system response regulator 4597247 uhpA 2956864 uhpA Yersinia pseudotuberculosis IP 32953 two-component system response regulator YP_072328.1 4596657 R 273123 CDS YP_072329.1 51598138 2957070 complement(4597363..4599054) 1 NC_006155.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 4599054 yhjW 2957070 yhjW Yersinia pseudotuberculosis IP 32953 phosphoethanolamine transferase YP_072329.1 4597363 R 273123 CDS YP_072330.1 51598139 2955060 complement(4599583..4601046) 1 NC_006155.1 similar to Yersinia pestis YPO4014 membrane protein (100% evalue=0); hypothetical protein 4601046 2955060 YPTB3849 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072330.1 4599583 R 273123 CDS YP_072331.1 51598140 2955855 complement(4601525..4602928) 1 NC_006155.1 similar to Yersinia pestis YPO4015 amino acid permease (99.3% evalue=0); Pseudomonas aeruginosa PA5097 glycine betaine/proline transport system permease (73.2% evalue=0); APC family histidine permease 4602928 hutT 2955855 hutT Yersinia pseudotuberculosis IP 32953 APC family histidine permease YP_072331.1 4601525 R 273123 CDS YP_072332.1 51598141 2955853 complement(4603314..4604846) 1 NC_006155.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 4604846 hutH 2955853 hutH Yersinia pseudotuberculosis IP 32953 histidine ammonia-lyase YP_072332.1 4603314 R 273123 CDS YP_072333.1 51598142 2955856 complement(4604843..4606534) 1 NC_006155.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 4606534 hutU 2955856 hutU Yersinia pseudotuberculosis IP 32953 urocanate hydratase YP_072333.1 4604843 R 273123 CDS YP_072334.1 51598143 2955062 4608208..4609137 1 NC_006155.1 similar to Yersinia pestis YPO4020 membrane protein (100% evalue=1.E-170); hypothetical protein 4609137 2955062 YPTB3855 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072334.1 4608208 D 273123 CDS YP_072335.1 51598144 2955063 4609139..4610383 1 NC_006155.1 Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism; hypothetical protein 4610383 2955063 YPTB3856 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072335.1 4609139 D 273123 CDS YP_072336.1 51598145 2955064 4610906..4611859 1 NC_006155.1 similar to Yersinia pestis YPO4022 iron transport protein (100% evalue=1.E-177); Brucella melitensis BMEII0607 ferric anguibactin-binding protein (48% evalue=6.E-72); iron siderophore (ferrichrome) ABC transporter substrate-binding protein 4611859 2955064 YPTB3857 Yersinia pseudotuberculosis IP 32953 iron siderophore (ferrichrome) ABC transporter substrate-binding protein YP_072336.1 4610906 D 273123 CDS YP_072337.1 51598146 2955065 4611869..4612828 1 NC_006155.1 similar to Yersinia pestis YPO4023 iron transport permease (99.6% evalue=1.E-174); Agrobacterium tumefaciens Atu2474 ABC transporter, membrane spanning protein (53.8% evalue=1.E-100); iron siderophore ABC transporter permease 4612828 2955065 YPTB3858 Yersinia pseudotuberculosis IP 32953 iron siderophore ABC transporter permease YP_072337.1 4611869 D 273123 CDS YP_072338.1 51598147 2955066 4612818..4613825 1 NC_006155.1 similar to Yersinia pestis YPO4024 iron transport permease (99.7% evalue=1.E-180); Brucella melitensis BMEII0605 ferric anguibactin transport system permease FatC (52.1% evalue=2.E-83); iron siderophore ABC transporter permease 4613825 2955066 YPTB3859 Yersinia pseudotuberculosis IP 32953 iron siderophore ABC transporter permease YP_072338.1 4612818 D 273123 CDS YP_072339.1 51598148 2955067 4613822..4614580 1 NC_006155.1 similar to Yersinia pestis YPO4025 iron ABC transporter, ATP-binding protein (98.8% evalue=1.E-138); Brucella melitensis BMEII0604 iron(III) dicitrate transport ATP-binding protein FecE (63.3% evalue=2.E-89); iron siderophore ABC transporter ATP-binding protein 4614580 2955067 YPTB3860 Yersinia pseudotuberculosis IP 32953 iron siderophore ABC transporter ATP-binding protein YP_072339.1 4613822 D 273123 CDS YP_072340.1 51598149 2955069 complement(4615019..4615345) 1 NC_006155.1 similar to Salmonella typhi STY4036 DNA-binding protein (43.5% evalue=4.E-12); Salmonella typhimurium STM3755 rhuM; cytoplasmic protein (68.5% evalue=1.E-32); hypothetical protein 4615345 2955069 YPTB3862 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072340.1 4615019 R 273123 CDS YP_072341.1 51598150 2955070 complement(4615368..4615775) 1 NC_006155.1 hypothetical protein 4615775 2955070 YPTB3863 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072341.1 4615368 R 273123 CDS YP_072342.1 51598151 2955071 complement(4616010..4616282) 1 NC_006155.1 similar to Yersinia pestis YPO4033 phage integrase (97.1% evalue=2.E-32); Escherichia coli ECs0289 integrase (68.1% evalue=1.E-22); phage integrase (partial) 4616282 2955071 YPTB3864 Yersinia pseudotuberculosis IP 32953 phage integrase (partial) YP_072342.1 4616010 R 273123 CDS YP_072343.1 51598152 2955072 complement(4616645..4617502) 1 NC_006155.1 similar to Escherichia coli Z1664 unknown (61.1% evalue=3.E-97); Escherichia coli Z1226 unknown (61.1% evalue=3.E-97); hypothetical protein 4617502 2955072 YPTB3865 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072343.1 4616645 R 273123 CDS YP_072344.1 51598153 2957105 complement(4617726..4618190) 1 NC_006155.1 similar to Escherichia coli b2646 ypjF; hypothetical 12.3 kD protein in alpA-gabD intergenic region (67.3% evalue=2.E-34); Escherichia coli JW2627 ypjF; Hypothetical protein (67.3% evalue=2.E-34); hypothetical protein 4618190 ypjF 2957105 ypjF Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072344.1 4617726 R 273123 CDS YP_072345.1 51598154 2956937 complement(4618147..4618482) 1 NC_006155.1 similar to Escherichia coli b0266 yagB; hypothetical 13.2 kD protein in perR-argF intergenic region (74.7% evalue=5.E-38); Escherichia coli JW0259 yagB; Hypothetical protein (74.7% evalue=5.E-38); hypothetical protein 4618482 yagB 2956937 yagB Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072345.1 4618147 R 273123 CDS YP_072346.1 51598155 2957039 complement(4618494..4618973) 1 NC_006155.1 similar to Escherichia coli b2644 yfjY; hypothetical 18.0 kD protein in alpA-gabD intergenic region (61.6% evalue=9.E-50); Escherichia coli JW2625 yfjY, yfjZ; Hypothetical protein (o160) (61.6% evalue=9.E-50); hypothetical protein 4618973 yfjY 2957039 yfjY Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072346.1 4618494 R 273123 CDS YP_072347.1 51598156 2955073 complement(4619156..4619776) 1 NC_006155.1 hypothetical protein 4619776 2955073 YPTB3869 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072347.1 4619156 R 273123 CDS YP_072348.1 51598157 2955074 complement(4619804..4620358) 1 NC_006155.1 hypothetical protein 4620358 2955074 YPTB3870 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072348.1 4619804 R 273123 CDS YP_072349.1 51598158 2955075 complement(4620606..4621238) 1 NC_006155.1 similar to Escherichia coli ECs1395 hypothetical protein (40.8% evalue=1.E-34); Escherichia coli Z1650 unknown (40.8% evalue=1.E-34); hypothetical protein 4621238 2955075 YPTB3871 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072349.1 4620606 R 273123 CDS YP_072350.1 51598159 2955076 complement(4621286..4621615) 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (55.2% evalue=6.E-22); IS100 transposase 4621615 2955076 YPTB3872 Yersinia pseudotuberculosis IP 32953 IS100 transposase YP_072350.1 4621286 R 273123 CDS YP_072351.1 51598160 2956938 4622244..4622864 1 NC_006155.1 similar to Escherichia coli b0277 yagK; hypothetical 24.5 kD protein in argF-intf intergenic region (33.1% evalue=1.E-23); Escherichia coli JW0271 yagK; Hypothetical protein (o208) (33.1% evalue=1.E-23); hypothetical protein 4622864 yagK 2956938 yagK Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072351.1 4622244 D 273123 CDS YP_072352.1 51598161 2955078 4623749..4624771 1 NC_006155.1 similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 4624771 2955078 YPTB3875 Yersinia pseudotuberculosis IP 32953 transposase YP_072352.1 4623749 D 273123 CDS YP_072353.1 51598162 2955079 4624771..4625550 1 NC_006155.1 similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 4625550 2955079 YPTB3876 Yersinia pseudotuberculosis IP 32953 transposase/IS protein YP_072353.1 4624771 D 273123 CDS YP_072354.1 51598163 2955081 complement(4626056..4626793) 1 NC_006155.1 similar to Clostridium acetobutylicum CAC0328 predicted metal-dependent hydrolase (30.4% evalue=2.E-24); Brucella melitensis BMEII0448 zinc metallopeptidases (34.3% evalue=3.E-32); metal-dependent hydrolase 4626793 2955081 YPTB3878 Yersinia pseudotuberculosis IP 32953 metal-dependent hydrolase YP_072354.1 4626056 R 273123 CDS YP_072355.1 51598164 2955082 complement(4626797..4630075) 1 NC_006155.1 similar to Methanocaldococcus jannaschii MJECL40 type I restriction enzyme, R subunit (28.3% evalue=4.E-76); Brucella melitensis BMEII0449 type I restriction-modification system restriction subunit (30.8% evalue=2.E-88); type I restriction enzyme restriction subunit 4630075 2955082 YPTB3879 Yersinia pseudotuberculosis IP 32953 type I restriction enzyme restriction subunit YP_072355.1 4626797 R 273123 CDS YP_072356.1 51598165 2955083 complement(4630072..4631118) 1 NC_006155.1 similar to Salmonella typhi STY4036 DNA-binding protein (78.7% evalue=1.E-146); Salmonella typhimurium STM3755 rhuM; cytoplasmic protein (77.9% evalue=1.E-154); hypothetical protein 4631118 2955083 YPTB3880 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072356.1 4630072 R 273123 CDS YP_072357.1 51598166 2955084 complement(4631115..4632344) 1 NC_006155.1 similar to Salmonella typhimurium STM4524 hsdS; specificity determinant for hsdM and hsdR (35.9% evalue=3.E-26); C. jejuni Cj1051c restriction modification enzyme (35.2% evalue=3.E-33); restriction modification enzyme 4632344 2955084 YPTB3881 Yersinia pseudotuberculosis IP 32953 restriction modification enzyme YP_072357.1 4631115 R 273123 CDS YP_072358.1 51598167 2955838 complement(4632334..4633857) 1 NC_006155.1 similar to Staphylococcus aureus_N315 SA0391 hsdM; probable type I site-specific deoxyribonuclease [Pathogenicity island SaPIn2] (38.2% evalue=4.E-95); Brucella melitensis BMEII0451 type I restriction-modification system methylation subunit (39.3% evalue=5.E-98); type I site-specific deoxyribonuclease LldI 4633857 hsdM 2955838 hsdM Yersinia pseudotuberculosis IP 32953 type I site-specific deoxyribonuclease LldI YP_072358.1 4632334 R 273123 CDS YP_072359.1 51598168 2955085 complement(4633864..4634442) 1 NC_006155.1 hypothetical protein 4634442 2955085 YPTB3883 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072359.1 4633864 R 273123 CDS YP_072360.1 51598169 2956048 4634660..4635574 1 NC_006155.1 similar to Salmonella typhi STY2056 transposase (100% evalue=1.E-177); A. thalianan At1g47875 T2E6.26; transposase (100% evalue=1.E-177); hypothetical protein 4635574 MJL12.14 2956048 MJL12.14 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072360.1 4634660 D 273123 CDS YP_072361.1 51598170 2955086 complement(4635877..4636101) 1 NC_006155.1 SinR-like protein 4636101 2955086 YPTB3885 Yersinia pseudotuberculosis IP 32953 SinR-like protein YP_072361.1 4635877 R 273123 CDS YP_072362.1 51598171 2955087 complement(4636419..4637633) 1 NC_006155.1 similar to Escherichia coli ECs4534 integrase (82.2% evalue=0); Escherichia coli Z5087 intL; integrase for prophage 933L and the LEE pathogenicity island (82.2% evalue=0); integrase 4637633 2955087 YPTB3886 Yersinia pseudotuberculosis IP 32953 integrase YP_072362.1 4636419 R 273123 CDS YP_072363.1 51598172 2955088 complement(4638102..4639295) 1 NC_006155.1 similar to Yersinia pestis YPO4034 AraC-family transcriptional regulatory protein (100% evalue=0); Escherichia coli ECs4452 regulator of xyl operon (79.4% evalue=0); AraC family transcriptional regulator 4639295 2955088 YPTB3887 Yersinia pseudotuberculosis IP 32953 AraC family transcriptional regulator YP_072363.1 4638102 R 273123 CDS YP_072364.1 51598173 2956915 complement(4639385..4640569) 1 NC_006155.1 similar to Yersinia pestis YPO4035 sugar transport system permease (100% evalue=0); Escherichia coli ECs4451 membrane component of xylose transport system (84.5% evalue=0); xylose ABC transporter permease 4640569 xylH 2956915 xylH Yersinia pseudotuberculosis IP 32953 xylose ABC transporter permease YP_072364.1 4639385 R 273123 CDS YP_072365.1 51598174 2956914 complement(4640556..4642088) 1 NC_006155.1 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 4642088 xylG 2956914 xylG Yersinia pseudotuberculosis IP 32953 xylose transporter ATP-binding subunit YP_072365.1 4640556 R 273123 CDS YP_072366.1 51598175 2955089 complement(4642296..4643291) 1 NC_006155.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 4643291 xylF 2955089 xylF Yersinia pseudotuberculosis IP 32953 D-xylose transporter subunit XylF YP_072366.1 4642296 R 273123 CDS YP_072367.1 51598176 2956912 4643754..4645073 1 NC_006155.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 4645073 xylA 2956912 xylA Yersinia pseudotuberculosis IP 32953 xylose isomerase YP_072367.1 4643754 D 273123 CDS YP_072368.1 51598177 2956913 4645197..4646651 1 NC_006155.1 similar to Yersinia pestis YPO4039 xylB; xylulose kinase (99.7% evalue=0); Escherichia coli ECs4447 xylulokinase (71.9% evalue=0); xylulose kinase 4646651 xylB 2956913 xylB Yersinia pseudotuberculosis IP 32953 xylulose kinase YP_072368.1 4645197 D 273123 CDS YP_072369.1 51598178 2955090 complement(4646731..4647717) 1 NC_006155.1 similar to Yersinia pestis YPO4040 exported protein (99.3% evalue=0); Escherichia coli JW0706 ybgO; Hypothetical protein (31.8% evalue=1.E-38); hypothetical protein 4647717 2955090 YPTB3893 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072369.1 4646731 R 273123 CDS YP_072370.1 51598179 2955091 complement(4647756..4648523) 1 NC_006155.1 similar to Yersinia pestis YPO4041 fimbrial chaperone (99.6% evalue=1.E-145); Escherichia coli Z0869 ybgP; chaperone (47.4% evalue=7.E-61); fimbrial chaperone 4648523 2955091 YPTB3894 Yersinia pseudotuberculosis IP 32953 fimbrial chaperone YP_072370.1 4647756 R 273123 CDS YP_072371.1 51598180 2957112 complement(4648616..4651114) 1 NC_006155.1 similar to Salmonella typhi STY3176 stdB; probable outer membrane fimbrial usher protein (46.9% evalue=0); Salmonella typhimurium STM3028 stdB; outer membrane usher protein (46.8% evalue=0); outer membrane fimbrial usher porin 4651114 yqiG 2957112 yqiG Yersinia pseudotuberculosis IP 32953 outer membrane fimbrial usher porin YP_072371.1 4648616 R 273123 CDS YP_072372.1 51598181 2955092 complement(4651190..4651747) 1 NC_006155.1 similar to Yersinia pestis YPO4044 fimbrial protein (100% evalue=3.E-98); Salmonella typhimurium STM3029 stdA; fimbrial-like protein (37% evalue=5.E-22); fimbrial protein 4651747 2955092 YPTB3896 Yersinia pseudotuberculosis IP 32953 fimbrial protein YP_072372.1 4651190 R 273123 CDS YP_072373.1 51598182 2955093 complement(4652629..4653621) 1 NC_006155.1 similar to Yersinia pestis YPO4045 membrane protein (99.6% evalue=0); Salmonella typhimurium STM3658 yiaH; inner membrane protein (58.9% evalue=1.E-109); hypothetical protein 4653621 2955093 YPTB3897 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072373.1 4652629 R 273123 CDS YP_072374.1 51598183 2955094 4653852..4654496 1 NC_006155.1 similar to Yersinia pestis YPO0996 insertion element IS1661 DNA-binding protein (100% evalue=1.E-101); IS1661 DNA-binding protein 4654496 2955094 YPTB3898 Yersinia pseudotuberculosis IP 32953 IS1661 DNA-binding protein YP_072374.1 4653852 D 273123 CDS YP_072375.1 51598184 2955095 4654550..4655335 1 NC_006155.1 similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.2% evalue=1.E-149); IS1661 transposase 4655335 2955095 YPTB3899 Yersinia pseudotuberculosis IP 32953 IS1661 transposase YP_072375.1 4654550 D 273123 CDS YP_072376.1 51598185 2955096 complement(4655494..4656447) 1 NC_006155.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 4656447 2955096 YPTB3900 Yersinia pseudotuberculosis IP 32953 ornithine cyclodeaminase YP_072376.1 4655494 R 273123 CDS YP_072377.1 51598186 2955097 complement(4656441..4657403) 1 NC_006155.1 similar to Yersinia pestis YPO4089 pyridoxal-phosphate dependent enzyme (99.6% evalue=1.E-179); Thermotoga maritima TM0356 threonine dehydratase catabolic (44.1% evalue=4.E-61); hypothetical protein 4657403 2955097 YPTB3901 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072377.1 4656441 R 273123 CDS YP_072378.1 51598187 2957077 4657611..4658912 1 NC_006155.1 similar to Salmonella typhi STY3967 yidR; ATP/GTP-binding protein (62.1% evalue=1.E-151); Salmonella typhimurium STM3811 yidR; cytoplasmic protein (62.1% evalue=1.E-151); hypothetical protein 4658912 yidR 2957077 yidR Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072378.1 4657611 D 273123 CDS YP_072379.1 51598188 2955098 complement(4658955..4659290) 1 NC_006155.1 similar to Yersinia pestis YPO4086 lipoprotein (97.2% evalue=9.E-58); Escherichia coli b3688 yidQ; hypothetical 14.8 kD protein in ibpA-gyrB intergenic region (43.2% evalue=1.E-19); hypothetical protein 4659290 2955098 YPTB3903 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072379.1 4658955 R 273123 CDS YP_072380.1 51598189 2955860 4659658..4660071 1 NC_006155.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 4660071 ibpA 2955860 ibpA Yersinia pseudotuberculosis IP 32953 heat shock protein IbpA YP_072380.1 4659658 D 273123 CDS YP_072381.1 51598190 2955861 4660352..4660816 1 NC_006155.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 4660816 ibpB 2955861 ibpB Yersinia pseudotuberculosis IP 32953 heat shock chaperone IbpB YP_072381.1 4660352 D 273123 CDS YP_072382.1 51598191 2957076 4661189..4662847 1 NC_006155.1 similar to Yersinia pestis YPO4083 yidE; membrane protein (99.8% evalue=0); Salmonella typhimurium STM3807 yidE; paral transport protein (75.8% evalue=0); hypothetical protein 4662847 yidE 2957076 yidE Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072382.1 4661189 D 273123 CDS YP_072383.2 161760552 2955267 complement(4662960..4664225) 1 NC_006155.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 4664225 avtA 2955267 avtA Yersinia pseudotuberculosis IP 32953 valine--pyruvate transaminase YP_072383.2 4662960 R 273123 CDS YP_072384.1 51598193 2955099 complement(4664681..4665124) 1 NC_006155.1 similar to Yersinia pestis YPO4081 membrane protein (99.3% evalue=2.E-76); hypothetical protein 4665124 2955099 YPTB3908 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072384.1 4664681 R 273123 CDS YP_072385.1 51598194 2955990 complement(4665529..4667592) 1 NC_006155.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase 4667592 malS 2955990 malS Yersinia pseudotuberculosis IP 32953 periplasmic alpha-amylase YP_072385.1 4665529 R 273123 CDS YP_072386.1 51598195 2955100 complement(4667900..4668880) 1 NC_006155.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 4668880 2955100 YPTB3910 Yersinia pseudotuberculosis IP 32953 2-hydroxyacid dehydrogenase YP_072386.1 4667900 R 273123 CDS YP_072387.1 51598196 2955101 4669417..4670061 1 NC_006155.1 similar to Yersinia pestis YPO4077 conserved hypothetical protein (99.5% evalue=1.E-118); Vibrio cholerae VC2666 conserved hypothetical protein (39.6% evalue=4.E-33); hypothetical protein 4670061 2955101 YPTB3911 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072387.1 4669417 D 273123 CDS YP_072388.1 51598197 2957071 complement(4670192..4670851) 1 NC_006155.1 similar to Yersinia pestis YPO4076 yiaD; lipoprotein (100% evalue=1.E-118); Salmonella typhimurium STM3645 yiaD; outer membrane lipoprotein (79.4% evalue=7.E-93); outer membrane lipoprotein 4670851 yiaD 2957071 yiaD Yersinia pseudotuberculosis IP 32953 outer membrane lipoprotein YP_072388.1 4670192 R 273123 CDS YP_072389.1 51598198 2955102 complement(4671210..4671665) 1 NC_006155.1 similar to Yersinia pestis YPO4075 acetyltransferase (97.3% evalue=4.E-84); Salmonella typhi STY4159 yiaC; acetyltransferase (46.9% evalue=4.E-35); hypothetical protein 4671665 2955102 YPTB3913 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072389.1 4671210 R 273123 CDS YP_072390.1 51598199 2956656 complement(4671662..4672234) 1 NC_006155.1 similar to Yersinia pestis YPO4074 tag; DNA-3-methyladenine glycosylase (100% evalue=1.E-112); Escherichia coli JW3518 tag; DNA-3-methyladenine glycosidase I (3-methyladenine-dna glycosylase I (69.7% evalue=5.E-75); DNA-3-methyladenine glycosylase 4672234 tag 2956656 tag Yersinia pseudotuberculosis IP 32953 DNA-3-methyladenine glycosylase YP_072390.1 4671662 R 273123 CDS YP_072391.1 51598200 2955728 4672581..4673495 1 NC_006155.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 4673495 glyQ 2955728 glyQ Yersinia pseudotuberculosis IP 32953 glycyl-tRNA synthetase subunit alpha YP_072391.1 4672581 D 273123 CDS YP_072392.1 51598201 2955729 4673505..4675574 1 NC_006155.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 4675574 glyS 2955729 glyS Yersinia pseudotuberculosis IP 32953 glycyl-tRNA synthetase subunit beta YP_072392.1 4673505 D 273123 CDS YP_072393.1 51598202 2957072 4676041..4676766 1 NC_006155.1 similar to Yersinia pestis YPO4070 yiaF; exported protein (99.1% evalue=1.E-130); Salmonella typhimurium STM3647 yiaF; outer membrane lipoprotein (52.1% evalue=2.E-62); hypothetical protein 4676766 yiaF 2957072 yiaF Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072393.1 4676041 D 273123 CDS YP_072394.1 51598203 2956089 4677416..4679347 1 NC_006155.1 similar to Yersinia pestis YPO4068 mtlA; PTS system, mannitol-specific IIABC component (99.8% evalue=0); Salmonella typhi STY4111 mtlA; mannitol-specific enzyme II of phosphotransferase system (82.4% evalue=0); PTS system mannitol-specific transporter subunit IIABC 4679347 mtlA 2956089 mtlA Yersinia pseudotuberculosis IP 32953 PTS system mannitol-specific transporter subunit IIABC YP_072394.1 4677416 D 273123 CDS YP_072395.1 51598204 2956090 4679484..4680647 1 NC_006155.1 similar to Yersinia pestis YPO4067 mtlD; mannitol-1-phosphate 5-dehydrogenase (98.9% evalue=0); Escherichia coli ECs4476 mannitol-1-phosphate dehydrogenase (76.1% evalue=1.E-160); mannitol-1-phosphate 5-dehydrogenase 4680647 mtlD 2956090 mtlD Yersinia pseudotuberculosis IP 32953 mannitol-1-phosphate 5-dehydrogenase YP_072395.1 4679484 D 273123 CDS YP_072396.1 51598205 2956092 4680854..4681408 1 NC_006155.1 Acts as a repressor of the mtlAD operon; mannitol repressor protein 4681408 mtlR 2956092 mtlR Yersinia pseudotuberculosis IP 32953 mannitol repressor protein YP_072396.1 4680854 D 273123 CDS YP_072397.1 51598206 2955103 4681657..4682013 1 NC_006155.1 similar to Yersinia pestis YPO4065 conserved hypothetical protein (100% evalue=2.E-60); Salmonella typhimurium STM3689 yibL; cytoplasmic protein (62.9% evalue=6.E-33); hypothetical protein 4682013 2955103 YPTB3921 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072397.1 4681657 D 273123 CDS YP_072398.1 51598207 2955104 complement(4682178..4682654) 1 NC_006155.1 similar to Yersinia pestis YPO4064 hypothetical protein (100% evalue=2.E-83); hypothetical protein 4682654 2955104 YPTB3922 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072398.1 4682178 R 273123 CDS YP_072399.1 51598208 2955105 complement(4683188..4683520) 1 NC_006155.1 similar to Yersinia pestis YPO4063 membrane protein (99% evalue=4.E-58); Salmonella typhi STY0296 hypothetical protein (32.9% evalue=1.E-11); hypothetical protein 4683520 2955105 YPTB3923 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072399.1 4683188 R 273123 CDS YP_072400.1 51598209 2956660 complement(4683710..4685659) 1 NC_006155.1 similar to Yersinia pestis YPO4062 tar, cheM; methyl-accepting chemotaxis protein II (99.6% evalue=0); Salmonella typhimurium STM1919 cheM; methyl accepting chemotaxis protein II, aspartate sensor-receptor (45.9% evalue=1.E-101); methyl-accepting chemotaxis protein II 4685659 tar 2956660 tar Yersinia pseudotuberculosis IP 32953 methyl-accepting chemotaxis protein II YP_072400.1 4683710 R 273123 CDS YP_072401.1 51598210 2956618 complement(4686003..4686626) 1 NC_006155.1 Mn; SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 4686626 sodA 2956618 sodA Yersinia pseudotuberculosis IP 32953 superoxide dismutase YP_072401.1 4686003 R 273123 CDS YP_072402.1 51598211 2955534 complement(4687079..4687903) 1 NC_006155.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4687903 fdhD 2955534 fdhD Yersinia pseudotuberculosis IP 32953 formate dehydrogenase accessory protein YP_072402.1 4687079 R 273123 CDS YP_072403.1 51598212 2955537 4688100..4691147 1 NC_006155.1 similar to Salmonella typhi STY3839 fdoG; formate dehydrogenase-O, major subunit (84.9% evalue=0); Salmonella typhimurium STM4037 fdoG; formate dehydrogenase (84.5% evalue=0) opal codon at position 4688685-7 for selenocysteine, same as in Escherichia coli; selenocysteine tRNA i; formate dehydrogenase-O major subunit 4691147 fdoG 2955537 fdoG Yersinia pseudotuberculosis IP 32953 formate dehydrogenase-O major subunit YP_072403.1 4688100 D 273123 CDS YP_072404.1 51598213 2955538 4691160..4692131 1 NC_006155.1 similar to Yersinia pestis YPO4057 fdoH; formate dehydrogenase-O, iron-sulfur subunit (100% evalue=0); Salmonella typhimurium STM4036 fdoH; formate dehydrogenase-O, Fe-S subunit (86.3% evalue=1.E-154); formate dehydrogenase-O, iron-sulfur subunit 4692131 fdoH 2955538 fdoH Yersinia pseudotuberculosis IP 32953 formate dehydrogenase-O, iron-sulfur subunit YP_072404.1 4691160 D 273123 CDS YP_072405.1 51598214 2955539 4692128..4692802 1 NC_006155.1 cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 4692802 fdoI 2955539 fdoI Yersinia pseudotuberculosis IP 32953 formate dehydrogenase-O subunit gamma YP_072405.1 4692128 D 273123 CDS YP_072406.1 51598215 2955535 4692802..4693731 1 NC_006155.1 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 4693731 fdhE 2955535 fdhE Yersinia pseudotuberculosis IP 32953 formate dehydrogenase accessory protein FdhE YP_072406.1 4692802 D 273123 CDS YP_072407.1 51598216 2956589 4693927..4695315 1 NC_006155.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 4695315 selA 2956589 selA Yersinia pseudotuberculosis IP 32953 selenocysteine synthase YP_072407.1 4693927 D 273123 CDS YP_072408.1 51598217 2956590 4695312..4697285 1 NC_006155.1 similar to Pasteurella multocida PM1766 selB; selenocysteine-specific elongation factor (45.5% evalue=1.E-152); Escherichia coli Z5011 selB; selenocysteinyl-tRNA-specific translation factor (58.5% evalue=0); selenocysteinyl-tRNA-specific translation factor 4697285 selB 2956590 selB Yersinia pseudotuberculosis IP 32953 selenocysteinyl-tRNA-specific translation factor YP_072408.1 4695312 D 273123 CDS YP_072409.1 51598218 2955106 4698045..4698377 1 NC_006155.1 similar to Yersinia pestis YPO4050 membrane protein (97.2% evalue=2.E-57); hypothetical protein 4698377 2955106 YPTB3934 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072409.1 4698045 D 273123 CDS YP_072410.1 51598219 2955107 complement(4698391..4698972) 1 NC_006155.1 similar to Yersinia pestis YPO4049 membrane protein (99.4% evalue=1.E-105); hypothetical protein 4698972 2955107 YPTB3935 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072410.1 4698391 R 273123 CDS YP_072411.1 51598220 2956005 complement(4699682..4700911) 1 NC_006155.1 similar to Yersinia pestis YPO4048 mdfA, cmr; multidrug translocase (100% evalue=0); Escherichia coli JW0826 mdfA; Multidrag translocase (chloramphenicol resistance pump CMR) (73% evalue=1.E-167); major facilitator superfamily multidrug translocase 4700911 mdfA 2956005 mdfA Yersinia pseudotuberculosis IP 32953 major facilitator superfamily multidrug translocase YP_072411.1 4699682 R 273123 CDS YP_072412.1 51598221 2955108 complement(4701470..4702255) 1 NC_006155.1 similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.6% evalue=1.E-150); IS1661 transposase 4702255 2955108 YPTB3937 Yersinia pseudotuberculosis IP 32953 IS1661 transposase YP_072412.1 4701470 R 273123 CDS YP_072413.1 51598222 2955109 complement(4702309..4702953) 1 NC_006155.1 similar to Yersinia pestis YPO0996 insertion element IS1661 DNA-binding protein (100% evalue=1.E-101); IS1661 DNA-binding protein 4702953 2955109 YPTB3938 Yersinia pseudotuberculosis IP 32953 IS1661 DNA-binding protein YP_072413.1 4702309 R 273123 CDS YP_072414.1 51598223 2955110 complement(4703437..4704246) 1 NC_006155.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 4704246 2955110 YPTB3939 Yersinia pseudotuberculosis IP 32953 sugar phosphatase YP_072414.1 4703437 R 273123 CDS YP_072415.1 51598224 2955767 complement(4704462..4706876) 1 NC_006155.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4706876 gyrB 2955767 gyrB Yersinia pseudotuberculosis IP 32953 DNA gyrase subunit B YP_072415.1 4704462 R 273123 CDS YP_072416.2 161760551 2956416 complement(4706896..4707981) 1 NC_006155.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4707981 recF 2956416 recF Yersinia pseudotuberculosis IP 32953 recombination protein F YP_072416.2 4706896 R 273123 CDS YP_072417.1 51598226 2955476 complement(4708154..4709254) 1 NC_006155.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 4709254 dnaN 2955476 dnaN Yersinia pseudotuberculosis IP 32953 DNA polymerase III subunit beta YP_072417.1 4708154 R 273123 CDS YP_072418.1 51598227 2955470 complement(4709259..4710647) 1 NC_006155.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 4710647 dnaA 2955470 dnaA Yersinia pseudotuberculosis IP 32953 chromosome replication initiator DnaA YP_072418.1 4709259 R 273123 CDS YP_072419.1 51598228 2955111 4710771..4710980 1 NC_006155.1 similar to Yersinia pestis YPO4098 hypothetical protein, 100% identical.; hypothetical protein 4710980 2955111 YPTB3944 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072419.1 4710771 D 273123 CDS YP_072420.1 51598229 2956517 4711363..4711503 1 NC_006155.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4711503 rpmH 2956517 rpmH Yersinia pseudotuberculosis IP 32953 50S ribosomal protein L34 YP_072420.1 4711363 D 273123 CDS YP_072421.1 51598230 2956473 4711522..4711881 1 NC_006155.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4711881 rnpA 2956473 rnpA Yersinia pseudotuberculosis IP 32953 ribonuclease P YP_072421.1 4711522 D 273123 CDS YP_072422.1 51598231 2955112 4711845..4712102 1 NC_006155.1 similar to Salmonella typhimurium STM3841 inner membrane protein (80% evalue=5.E-35); Escherichia coli JW3682 yidD; Hypothetical protein (80% evalue=5.E-35); hypothetical protein 4712102 2955112 YPTB3947 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072422.1 4711845 D 273123 CDS YP_072423.1 51598232 2957075 4712105..4713745 1 NC_006155.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 4713745 yidC 2957075 yidC Yersinia pseudotuberculosis IP 32953 inner membrane protein translocase component YidC YP_072423.1 4712105 D 273123 CDS YP_072424.1 51598233 2956687 4713888..4715252 1 NC_006155.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4715252 trmE 2956687 trmE Yersinia pseudotuberculosis IP 32953 tRNA modification GTPase TrmE YP_072424.1 4713888 D 273123 CDS YP_072425.1 51598234 2955113 4715459..4716658 1 NC_006155.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 4716658 2955113 YPTB3950 Yersinia pseudotuberculosis IP 32953 trans-2-enoyl-CoA reductase YP_072425.1 4715459 D 273123 CDS YP_072426.1 51598235 2955114 complement(4717127..4717408) 1 NC_006155.1 similar to Yersinia pestis YPO4105 exported protein (97.8% evalue=2.E-42); hypothetical protein 4717408 2955114 YPTB3951 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072426.1 4717127 R 273123 CDS YP_072427.1 51598236 2955115 complement(4717470..4718090) 1 NC_006155.1 similar to Yersinia pestis YPO4106 hypothetical protein (99.5% evalue=1.E-115); hypothetical protein 4718090 2955115 YPTB3952 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072427.1 4717470 R 273123 CDS YP_072428.1 51598237 2957078 complement(4718635..4720020) 1 NC_006155.1 similar to Yersinia pestis YPO4107 yieG; Xanthine/uracil permeases family protein (100% evalue=0); Salmonella typhimurium STM3851 yieG; xanthine/uracil permeases family (86.8% evalue=0); xanthine/uracil permease family protein 4720020 yieG 2957078 yieG Yersinia pseudotuberculosis IP 32953 xanthine/uracil permease family protein YP_072428.1 4718635 R 273123 CDS YP_072429.1 51598238 2955116 4720456..4721124 1 NC_006155.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 4721124 2955116 YPTB3954 Yersinia pseudotuberculosis IP 32953 6-phosphogluconate phosphatase YP_072429.1 4720456 D 273123 CDS YP_072430.1 51598239 2955117 complement(4721159..4721914) 1 NC_006155.1 similar to Yersinia pestis YPO4109 amino acid transport system permease (98.8% evalue=1.E-141); Pseudomonas aeruginosa PA2202 polar amino acid transport system permease (64.8% evalue=3.E-79); amino acid ABC transporter permease 4721914 2955117 YPTB3955 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter permease YP_072430.1 4721159 R 273123 CDS YP_072431.1 51598240 2955118 complement(4721916..4722653) 1 NC_006155.1 similar to Yersinia pestis YPO4110 ABC transporter permease (100% evalue=1.E-140); Pseudomonas aeruginosa PA2203 polar amino acid transport system permease (65.5% evalue=4.E-74); amino acid ABC transporter permease 4722653 2955118 YPTB3956 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter permease YP_072431.1 4721916 R 273123 CDS YP_072432.1 51598241 2955119 complement(4722836..4723690) 1 NC_006155.1 similar to Yersinia pestis YPO4111 periplasmic solute-binding protein (100% evalue=1.E-158); Pseudomonas aeruginosa PA2204 polar amino acid transport system substrate-binding protein (58.3% evalue=6.E-84); amino acid ABC transporter substrate-binding protein 4723690 2955119 YPTB3957 Yersinia pseudotuberculosis IP 32953 amino acid ABC transporter substrate-binding protein YP_072432.1 4722836 R 273123 CDS YP_072433.1 51598242 2955120 complement(4723910..4724581) 1 NC_006155.1 similar to Yersinia pestis YPO4112 membrane protein (100% evalue=1.E-121); Pseudomonas aeruginosa PA0664 hypothetical protein (37.9% evalue=2.E-10); hypothetical protein 4724581 2955120 YPTB3958 Yersinia pseudotuberculosis IP 32953 hypothetical protein YP_072433.1 4723910 R 273123 CDS YP_072434.1 51598243 2956271 complement(4724877..4725599) 1 NC_006155.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 4725599 phoU 2956271 phoU Yersinia pseudotuberculosis IP 32953 transcriptional regulator PhoU YP_072434.1 4724877 R 273123 CDS YP_072435.1 51598244 2956351 complement(4725687..4726463) 1 NC_006155.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 4726463 pstB 2956351 pstB Yersinia pseudotuberculosis IP 32953 phosphate transporter ATP-binding protein YP_072435.1 4725687 R 273123 CDS YP_072436.1 51598245 2956349 complement(4726544..4727431) 1 NC_006155.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 4727431 pstA 2956349 pstA Yersinia pseudotuberculosis IP 32953 phosphate transporter permease subunit PtsA YP_072436.1 4726544 R 273123 CDS YP_072437.1 51598246 2956353 complement(4727433..4728404) 1 NC_006155.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 4728404 pstC 2956353 pstC Yersinia pseudotuberculosis IP 32953 phosphate transporter permease subunit PstC YP_072437.1 4727433 R 273123 CDS YP_072438.1 51598247 2956355 complement(4728618..4729658) 1 NC_006155.1 similar to Yersinia pestis YPO4117 pstS, phoS; phosphate-binding periplasmic protein (100% evalue=0); Salmonella typhimurium STM3857 pstS; ABC superfamily (bind_prot), high-affinity phosphate transporter (86.9% evalue=1.E-175); phosphate ABC transporter substrate-binding protein 4729658 pstS 2956355 pstS Yersinia pseudotuberculosis IP 32953 phosphate ABC transporter substrate-binding protein YP_072438.1 4728618 R 273123 CDS YP_072439.1 51598248 2955693 complement(4730141..4731970) 1 NC_006155.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 4731970 glmS 2955693 glmS Yersinia pseudotuberculosis IP 32953 glucosamine--fructose-6-phosphate aminotransferase YP_072439.1 4730141 R 273123 CDS YP_072440.1 51598249 2955694 complement(4732171..4733541) 1 NC_006155.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 4733541 glmU 2955694 glmU Yersinia pseudotuberculosis IP 32953 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_072440.1 4732171 R 273123 CDS YP_072441.2 284987828 2955259 complement(4734160..4734582) 1 NC_006155.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 4734582 atpC 2955259 atpC Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit epsilon YP_072441.2 4734160 R 273123 CDS YP_072442.1 51598251 2955260 complement(4734604..4735986) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 4735986 atpD 2955260 atpD Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit beta YP_072442.1 4734604 R 273123 CDS YP_072443.1 51598252 2955263 complement(4736142..4737005) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 4737005 atpG 2955263 atpG Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit gamma YP_072443.1 4736142 R 273123 CDS YP_072444.1 51598253 2955257 complement(4737067..4738608) 1 NC_006155.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 4738608 atpA 2955257 atpA Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit alpha YP_072444.1 4737067 R 273123 CDS YP_072445.1 51598254 2955264 complement(4738623..4739156) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 4739156 atpH 2955264 atpH Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit delta YP_072445.1 4738623 R 273123 CDS YP_072446.1 51598255 2955262 complement(4739171..4739641) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 4739641 atpF 2955262 atpF Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit B YP_072446.1 4739171 R 273123 CDS YP_072447.1 51598256 2955261 complement(4739703..4739942) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 4739942 atpE 2955261 atpE Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit C YP_072447.1 4739703 R 273123 CDS YP_072448.1 51598257 2955258 complement(4739992..4740816) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 4740816 atpB 2955258 atpB Yersinia pseudotuberculosis IP 32953 ATP synthase F0F1 subunit A YP_072448.1 4739992 R 273123 CDS YP_072449.1 51598258 2955265 complement(4740856..4741239) 1 NC_006155.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 4741239 atpI 2955265 atpI Yersinia pseudotuberculosis IP 32953 F0F1 ATP synthase subunit I YP_072449.1 4740856 R 273123 CDS YP_072450.1 51598259 2955686 complement(4741906..4742526) 1 NC_006155.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4742526 gidB 2955686 gidB Yersinia pseudotuberculosis IP 32953 16S rRNA methyltransferase GidB YP_072450.1 4741906 R 273123 CDS YP_072451.1 51598260 2955685 complement(4742671..4744560) 1 NC_006155.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 4744560 gidA 2955685 gidA Yersinia pseudotuberculosis IP 32953 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_072451.1 4742671 R 273123 CDS