-- dump date 20140620_141627 -- class Genbank::CDS -- table cds_function -- id function YP_068509.1 IPR000525 Initiator RepB protein YP_068514.1 IPR004346 IPR007792 Type IV secretory pathway YP_068519.1 IPR007688 TriE/TrbL/VirB6 plasmid conjugal transfer protein YP_068521.1 IPR004357 Type IV secretion system TriH/CagX conjugation protein YP_068522.1 IPR005498 Bacterial conjugation TrbI-like protein YP_068523.1 IPR001482 Bacterial type II secretion system protein E YP_068538.1 IPR005738 Bacterial DNA topoisomerase III YP_068761.1 pumps out Pb++/Cd++/Zn++/Hg++ YP_068958.1 possibly involved in osmoadaptation YP_069130.1 three activities: transcriptional regulator for NAD biosynthesis, regulator of PnuC activity, also contains NMN adenylyltransferase activity YP_069228.1 possible exporter of lipid linked murein precusors; essential cell division gene, stabilizes FtsZ ring, cytoplasmic membrane required for PBP2 expression YP_069233.1 ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes YP_069236.1 Changed start 2 AA from M to L to match Sanger. YP_069246.1 involved in type IV pilin biogenesis YP_069247.1 involved in biogenesis of fimbriae (type IV pilin) YP_069256.1 FAD/NAD(P)-binding; component of 2-oxodehydrogenase and pyruvate dehydrogenase complexes; L protein of glycine cleavage complex second part YP_069259.1 possible paraquat efflux pump YP_069263.1 periplasmic protein translocated by Tat system; multicopper oxidase homolog; regulated by copper-responsive CueR activator YP_069321.1 Zinc-binding dehydrogenase YP_069326.1 multimodular ArcB: membrane part of sensory histidine kinase in two-component regulator with ArcA, senses redox conditions YP_069391.1 phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) YP_069400.1 gives resistance to azaleucine YP_069495.1 transports cell wall degradation products into the cell, which probably acts as the signal YP_069557.1 cationic antimicrobial peptides (CAMPs) induced K+ efflux H+ antiporter to acidify cytoplasm YP_069558.1 works with rosB, a K+ efflux H+ antiporter, to confer resistance to CAMPs YP_069648.1 magnesium and cobalt efflux YP_070128.1 This new assignment matches the Yersinia pestis homologue and overlaps more reasonably with the upstream gene YP_070218.1 part of flagellar protein export and assembly apparatus YP_070219.1 part of flagellar protein export and assembly apparatus YP_070220.2 part of flagellar protein export and assembly apparatus YP_070221.1 part of flagellar protein export and assembly apparatus YP_070226.1 part of flagellar protein export and assembly apparatus YP_070227.1 part of flagellar protein export and assembly apparatus YP_070228.1 part of flagellar protein export and assembly apparatus YP_070230.1 part of flagellar protein export and assembly apparatus YP_070282.1 Phage holin analogue protein (Serratia marcescens) YP_070356.1 similar to hypothetical bacteriophage 933W protein YP_070456.1 causes sensitivity to Pb+2 YP_070704.1 binds to DNA replication terminator sequences to prevent passage of replication forks YP_071318.1 possible opine/polyamine regulatory protein and aminotransferase YP_071339.1 converts ATP and xanthosine 5'-phosphate and L-glutamine and water to AMP and pyrophosphate diphosphate and GMP and L-glutamate YP_071556.1 Involved in reversible methylation during bacterial chemotaxis. YP_071560.1 Type 4 prepilin-like proteins leader peptide processing. YP_071573.1 Central intermediary metabolism. YP_071578.1 May be capable of acting on hyaluronan and chondroitin in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen (pfam02278). YP_071582.1 probable tagatose-6-phosphate ketose/aldose isomerase YP_071590.1 Possibly links the heparin and the chondroitin sulfate utilization pathways which contribute to the colonization of the intestinal tract. May have a regulatory function. Required for the expression of chondro-6-sulfatase. YP_071599.1 possible Lactose regulon repressor. YP_071605.1 Possibly involved in cellular uptake of carbohydrates. YP_071632.1 possible viral repressor. YP_071633.1 Inhibits the formation of the phage repressor protein and autoregulation of the early operon YP_071638.1 possible exonuclease III YP_071639.1 possible contribution to replication. YP_071640.1 possible bacteriophage transcriptional regulator YP_071642.1 possible terminase, ATPase subunit. YP_071643.1 possible phage scaffolding protein YP_071644.1 major capsid protein YP_071645.1 possible terminase, endonuclease subunit YP_071646.1 probable head completion and stabilization protein YP_071649.1 tail sheath protein YP_071651.1 induces host cell lysis by causing formation of pores in the inner membrane YP_071657.1 baseplate assembly protein. YP_071659.1 probable tail fiber protein. YP_071660.1 possible tail fiber assembly protein. YP_071667.1 Required for many types of recombinational events YP_071668.1 Required for disulfide bond formation in some periplasmic proteins. Also acts as a disulfide isomerase. YP_071670.1 Low-potential electron donor to a number of redox enzymes (potential). YP_071671.1 May contribute to resistance to bacteriocins. YP_071676.1 May catalyse the degradation of Glycine(by similarity). YP_071683.1 May Belong to the Glycine cleavage system which catalyses the degradation of glycine YP_071685.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone. YP_071686.1 Releases any N-terminal amino acid, including Proline, that is linked with Proline, even from a dipeptide or tripeptide. YP_071689.1 May catalyse ATP + 5-Formyltetrahydrofolate = ADP + Orthophosphate + 5,10-Methenyltetrahydrofolate. YP_071690.1 Involved in the first committed step of the 'phosphorylated' pathway of L-Serine biosynthesis. YP_071691.1 Involved in the monoxidative branch of the pentose phosphate pathway. YP_071694.1 probable amino acid efflux protein. YP_071696.2 Sixth step in glycolysis. YP_071697.1 Involved in the second step of the second phase of glycolysis YP_071698.1 Could play a role in pyridoxal 5'-phosphate synthesis. YP_071701.1 Part of multicomponent 3-Phenylpropionate dioxygenase. YP_071703.1 May act ornithine, lysine, R and related substrates. YP_071704.1 Catalyzes the formation of S-adenosylmethionine from methionine and ATP. YP_071705.1 Involved in bolA gene expression at the stationary phase. YP_071708.1 Converts ATP + gamma-L-glutamyl-L-cysteine + glycine to ADP + phosphate + glutathione. YP_071710.1 possible Holliday junction resolvase. YP_071715.1 Converts L-Proline + NAD(P)(+) to 1-Pyrroline-5-Carboxylate + NAD(P)H. YP_071719.1 May catalyze the oxidative decarboxylation of coproporphyrinogen III to form protoporphyrinogen IX. YP_071722.1 Converts L-GLUTAMINE + H(2)O into L-GLUTAMATE + NH(3) YP_071725.1 Possibly active on G/A mispairs. YP_071727.2 May play a role in recycling of muropeptides during cell elongation and/or division. YP_071728.2 possible ferrichrome binding protein. YP_071729.1 Possibly involved in Fe transport (COG1629 Outer membrane receptor proteins, mostly Fe transport). YP_071736.1 possible kinase YP_071741.1 May form part of a multi-chaperone system supressing protein aggregation. YP_071742.1 possible haemolysin co-regulated protein. YP_071748.1 Involved in the transposition process. YP_071751.1 Quorum-sensing signal generator. YP_071775.1 possible Rhs accessory element. YP_071781.1 probable yersiniabactin transporter YP_071782.1 probable yersiniabactin transporter YP_071784.1 Possibly associated to a non ribosomal biosynthesis process. YP_071785.1 probable siderophore-like synthase. YP_071786.1 possible oxidoreductase (pfam00106 and pfam02716). YP_071790.1 May hydrolyse a variety of tripeptides containing N-terminal Methionine, Leucine or Phenylalanine. YP_071799.1 Possibly involved in bacterial signaling. May be a phosphoesterase (pfam00990) YP_071804.1 Facilitates Ferrioxamine uptake. YP_071810.1 Proton conductor component of motor, torque generator. YP_071811.1 possible alternative Sigma factor. YP_071816.1 Possibly required for joining the filament to the hook and capping the distal tip of the filament. YP_071817.1 Polymerizes to form the filaments of the bacterial flagella. YP_071821.1 Hook-filament junction YP_071824.1 May assemble around the rod to form the L-ring and probably and protect the motor /basal body from shearing forces during rotation. YP_071825.1 May assemble around the rod to form the L-ring. (by similarity) YP_071829.1 Possibly required for flagellar hook formation. May act as a scaffolding protein. YP_071832.2 Possibly involved flagella basal body P-ring formation. YP_071833.1 May negatively regulate flagellar genes by inhibiting the activity of FliA. YP_071835.1 fliJ is part of flagellar protein export and assembly apparatus YP_071836.1 probable proton translocase involved in local circuits at the flagellum; part of flagellar protein export and assembly apparatus. YP_071837.1 Needed for flagellar regrowth and assembly, part of flagellar protein export and assembly apparatus. YP_071839.1 Possibly involved in energy transduction; part of flagellar protein export and assembly apparatus. YP_071843.1 Interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). YP_071844.1 part of flagellar protein export and assembly apparatus YP_071845.1 part of flagellar protein export and assembly apparatus YP_071846.1 part of flagellar protein export and assembly apparatus YP_071847.1 Required for the formation of the rod structure in the basal body of the flagellar apparatus; part of flagellar protein export and assembly apparatus. YP_071848.1 part of flagellar protein export and assembly apparatus YP_071850.1 Part of the binding-protein-dependent transport system for uptake of ferrienterobactin. YP_071852.1 Mediates assembly of pili by forming soluble multimeric complexes with pili subunits as an intermediate step in the assembly process. YP_071853.1 Involved in the transport and assembly of the PapA fimbrial subunits across the outer membrane. YP_071854.1 probable major fimbrial subunit. YP_071861.1 possible secretion pathway protein. YP_071864.1 possible contribution to nonspecific tight adherence. YP_071865.1 possible contribution to nonspecific tight adherence. YP_071867.1 possible contribution to nonspecific tight adherence YP_071868.1 possible contribution to nonspecific tight adherence. YP_071870.1 possible contribution to tight adherence. YP_071871.1 Possibly involved in the TonB-dependent energy dependent transport of various receptor-bound substrates. YP_071872.1 Involved in the TonB-dependent energy dependent transport of various receptor-bound substrates. YP_071873.1 Required fot transsulfuration processes. YP_071878.1 possible Fe-S oxidoreductases family 2 activity. YP_071879.1 cell division protein - suppresses a ftsi mutation. YP_071880.1 Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position. YP_071881.1 Relaxation of supercoiled DNA activity. Essential for chromosome segregation. YP_071882.1 May catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species YP_071884.1 Relaxation of supercoiled DNA activity. Essential for chromosome segregation YP_071886.1 In E.coli, interferes with the expression of the LacZ gene. possible phosphohydrolase (COG1409). YP_071888.1 Ribose 5P biosynthesis YP_071889.1 possible Outer Membrane efflux protein. YP_071893.1 Involved in riboflavin biosynthesis. YP_071896.1 Lipopolysaccharide biosynthesis. Bifunctional enzyme involved in the synthesis of ADP-glyceromannoheptose YP_071897.1 Adenylylation and deadenylylation of Gln synthetase (by similarity). YP_071900.1 May be involved in synthesis of the tRNA cca terminus. YP_071901.1 undecaprenol kinase (KEGG:[EC:2.7.1.66]) YP_071903.1 possible transporter YP_071906.1 Synthesizes small RNA primers for the Okazaki fragments. YP_071907.1 Bacterial primary sigma factor. YP_071926.1 possible OEP YP_071944.1 Interacts with the cell-bound hemolysin. Necessary for the extracellular secretion and activation of the hemolysin. YP_071945.1 Involved in resistance to potassium tellurite. YP_071947.1 Involved in resistance to potassium tellurite. YP_071948.1 Possibly involved in resistance to potassium tellurite. YP_071950.1 possible Serine/threonine protein kinase (COG0515 Serine/threonine protein kinases). YP_071952.1 Catalyses the NADP-Dependent reduction of 2,4-Dienoyl-COA to yield Trans-2- Enoyl-COA. YP_071953.1 Possibly involved in the methylation of the guanosine in position 966 of 16S rRNA in the 30S particle. YP_071955.1 possible YgjP-like metal-dependent hydrolase. (COG1451 Predicted metal-dependent hydrolase). YP_071962.1 Transport of hexuronate. YP_071972.1 Conjugation of reduced Glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. YP_071983.1 probable kinase/Phosphatase. Member of the two-component regulatory system ArcB/ArcA. Represses a wide variety of aerobic enzymes under anaerobic conditions (by similarity). YP_071985.2 Converts 2 L-GLUTAMATE + NADP(+) to L-GLUTAMINE + 2-OXOGLUTARATE + NADPH YP_071986.1 Converts 2 L-GLUTAMATE + NADP(+) to L-GLUTAMINE + 2-OXOGLUTARATE + NADPH YP_071989.1 May form an equimolar complex with the RNA polymerase holoenzyme. Synthesized predominantly during aa starvation, possible GST activity. YP_071994.1 possible Serine endoprotease. YP_071995.1 possible Serine protease / trypsin-like proteinase. YP_071998.1 Inhibits the formation of the RSBW-Sigma B Complex YP_072004.1 pfam01380 - SIS domain: possible Phosphosugar Isomerase. Possibly involved in capsule formation. YP_072009.1 Promotes the attachment of the RNA polymerase to specific initiation sites and then is released. YP_072011.1 Sugar specific PTS family, enzyme IIA, also regulates N metabolism. YP_072013.1 possible Nitrogen related hpr. YP_072196.1 stimulate K+ efflux by kefB YP_072232.2 protein secretion with type II and III systems YP_072326.1 uptakes hexose phophates and regulates uhpT YP_072423.1 membrane insertion and Ntail secretion into the periplasm YP_072434.1 negative regulator of the pho regulon