-- dump date 20140620_141623 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 273123000001 SEQ_END SEQ_END NC_006153.2 68525 68525 DR NC_006153.2; contig end 68525..68525 Yersinia pseudotuberculosis IP 32953 273123000002 SEQ_END SEQ_END NC_006154.1 27702 27702 DR NC_006154.1; contig end 27702..27702 Yersinia pseudotuberculosis IP 32953 273123000003 SEQ_END SEQ_END NC_006155.1 4744671 4744671 DR NC_006155.1; contig end 4744671..4744671 Yersinia pseudotuberculosis IP 32953 YP_068414.1 CDS pYV0001 NC_006153.2 12 2210 R similar to Y. pestis YPCD1.72c; ypkA; targeted effector protein kinase complement(12..2210) Yersinia pseudotuberculosis IP 32953 2952894 YP_068415.1 CDS pYV0002 NC_006153.2 2218 2667 R similar to Y. pestis YPCD1.73c; hypothetical protein complement(2218..2667) Yersinia pseudotuberculosis IP 32953 2952895 YP_068416.1 CDS pYV0003 NC_006153.2 2919 3239 R similar to Y. pestis YPCD1.14c; transposase remnant complement(2919..3239) Yersinia pseudotuberculosis IP 32953 2952896 YP_068417.1 CDS pYV0004 NC_006153.2 3411 3650 R hypothetical protein complement(3411..3650) Yersinia pseudotuberculosis IP 32953 2952897 YP_068418.2 CDS pYV0005 NC_006153.2 4823 5689 R RepA; replication protein complement(4823..5689) Yersinia pseudotuberculosis IP 32953 2952898 YP_068419.1 CDS pYV0006 NC_006153.2 5803 5955 D hypothetical protein 5803..5955 Yersinia pseudotuberculosis IP 32953 2952899 YP_068420.1 CDS pYV0007 NC_006153.2 5998 6252 R similar to Y. pestis YPCD1.79c; replication protein complement(5998..6252) Yersinia pseudotuberculosis IP 32953 2952900 YP_068421.1 CDS pYV0008 NC_006153.2 6779 7183 D identical to Y. pestis YPCD1.81; transposase remnant 6779..7183 Yersinia pseudotuberculosis IP 32953 2952901 YP_068422.1 CDS pYV0009 NC_006153.2 7489 7806 R similar to Y. pestis YPCD1.83c; hypothetical protein complement(7489..7806) Yersinia pseudotuberculosis IP 32953 2952902 YP_068423.1 CDS pYV0010 NC_006153.2 7978 8436 R similar to Y. pestis YPCD1.84c; hypothetical protein complement(7978..8436) Yersinia pseudotuberculosis IP 32953 2952903 YP_068424.1 CDS pYV0011 NC_006153.2 8586 8774 D identical to C-term of Y. pestis YPCC1.85; transposase remname 8586..8774 Yersinia pseudotuberculosis IP 32953 2952904 YP_068425.1 CDS pYV0012 NC_006153.2 8771 8980 R hypothetical protein complement(8771..8980) Yersinia pseudotuberculosis IP 32953 2952905 YP_068426.1 CDS pYV0013 NC_006153.2 9103 10401 R hypothetical protein complement(9103..10401) Yersinia pseudotuberculosis IP 32953 2952906 YP_068427.1 CDS pYV0016 NC_006153.2 11386 13701 R similar to Y. pestis YPCD1.90c; tnpA; transposase protein complement(11386..13701) Yersinia pseudotuberculosis IP 32953 2952909 YP_068428.1 CDS pYV0017 NC_006153.2 13865 14416 D identical to Y. pestis YPCD1.91; resolvase 13865..14416 Yersinia pseudotuberculosis IP 32953 2952910 YP_068429.1 CDS pYV0018 NC_006153.2 15467 15733 D identical to Y. pestis YPCD1.93; transposase 15467..15733 Yersinia pseudotuberculosis IP 32953 2952911 YP_068430.1 CDS pYV0019 NC_006153.2 15757 16566 D similar to Y. pestis YPCD1.94; transposase 15757..16566 Yersinia pseudotuberculosis IP 32953 2952912 YP_068431.1 CDS pYV0020 NC_006153.2 16714 17139 R similar to Y. pestis YPCD1.95c; sycH; yopH targeting protein complement(16714..17139) Yersinia pseudotuberculosis IP 32953 2952913 YP_068432.1 CDS pYV0021 NC_006153.2 17484 17915 R similar to Y. pestis YPCD1.96c; transposase complement(17484..17915) Yersinia pseudotuberculosis IP 32953 2952914 YP_068433.1 CDS pYV0022 NC_006153.2 17915 19087 R similar to fusion of Y.pestis YPCD1.03c and YPCD1.97c; transposase complement(17915..19087) Yersinia pseudotuberculosis IP 32953 2952915 YP_068434.1 CDS pYV0023 NC_006153.2 19220 19834 D similar to Y. pestis YPCD1.04; transposase remnant 19220..19834 Yersinia pseudotuberculosis IP 32953 2952916 YP_068435.1 CDS pYV0024 NC_006153.2 19897 20289 R similar to Y. pestis YPCD1.05c; sycE, yerA; yopE chaperone complement(19897..20289) Yersinia pseudotuberculosis IP 32953 2952917 YP_068436.1 CDS pYV0025 NC_006153.2 20483 21142 D identical to Y. pestis YPCD1.06; outer membrane virulence protein 20483..21142 Yersinia pseudotuberculosis IP 32953 2952918 YP_068437.1 CDS pYV0026 NC_006153.2 21282 21581 R similar to Y. pestis YPCD1.08c; hypothetical protein complement(21282..21581) Yersinia pseudotuberculosis IP 32953 2952919 YP_068438.1 CDS pYV0027 NC_006153.2 21574 21849 R similar to Y. pestis YPCD1.09c; hypothetical protein complement(21574..21849) Yersinia pseudotuberculosis IP 32953 2952920 YP_068439.1 CDS pYV0028 NC_006153.2 21960 22163 R similar to Y. pestis YPCD1.10c; transposase remnant complement(21960..22163) Yersinia pseudotuberculosis IP 32953 2952921 YP_068440.1 CDS pYV0029 NC_006153.2 22359 22532 D hypothetical protein 22359..22532 Yersinia pseudotuberculosis IP 32953 2952922 YP_068441.1 CDS pYV0030 NC_006153.2 22682 22975 R hypothetical protein complement(22682..22975) Yersinia pseudotuberculosis IP 32953 2952923 YP_068442.1 CDS pYV0031 NC_006153.2 23123 24088 R SopB; plasmid-partitioning protein complement(23123..24088) Yersinia pseudotuberculosis IP 32953 2952924 YP_068443.2 CDS pYV0032 NC_006153.2 24085 25251 R similar to Y. pestis YPCD1.13c; plasmid-partitioning protein SopA complement(24085..25251) Yersinia pseudotuberculosis IP 32953 2952925 YP_068444.1 CDS pYV0033 NC_006153.2 25800 25913 D hypothetical protein 25800..25913 Yersinia pseudotuberculosis IP 32953 2952926 YP_068445.1 CDS pYV0034 NC_006153.2 26051 26245 R similar to Y. pestis YPCD1.14c; transposase remnant complement(26051..26245) Yersinia pseudotuberculosis IP 32953 2952927 YP_068446.1 CDS pYV0035 NC_006153.2 26357 26815 R similar to Y. pestis YPCD1.15c; hypothetical protein complement(26357..26815) Yersinia pseudotuberculosis IP 32953 2952928 YP_068447.1 CDS pYV0036 NC_006153.2 26842 27102 R similar to Y. pestis YPCD1.85; hypothetical protein complement(26842..27102) Yersinia pseudotuberculosis IP 32953 2952929 YP_068448.1 CDS pYV0039 NC_006153.2 28171 28353 R similar to Y. pestis YPCD1.18c; transposase complement(28171..28353) Yersinia pseudotuberculosis IP 32953 2952932 YP_068449.1 CDS pYV0040 NC_006153.2 28491 29039 R similar to Y. pestis YPCD1.19c, yopK, yopQ, probable virulence determinant protein; yop targeting protein yopK, yopQ complement(28491..29039) Yersinia pseudotuberculosis IP 32953 2952933 YP_068450.1 CDS pYV0041 NC_006153.2 29513 30481 D similar to Y. pestis YPCD1.20; yop targeted effector yopT 29513..30481 Yersinia pseudotuberculosis IP 32953 2952934 YP_068451.1 CDS pYV0042 NC_006153.2 30481 30873 D similar to Y. pestis YPCD1.21; yopT chaperone 30481..30873 Yersinia pseudotuberculosis IP 32953 2952935 YP_068452.1 CDS pYV0043 NC_006153.2 31368 31559 D similar to Y. pestis YPCD1.24c; transposase remnant 31368..31559 Yersinia pseudotuberculosis IP 32953 2952936 YP_068453.1 CDS pYV0044 NC_006153.2 31576 31995 D similar to Y. pestis YPCD1.23; hypothetical protein 31576..31995 Yersinia pseudotuberculosis IP 32953 2952937 YP_068454.1 CDS pYV0045 NC_006153.2 32524 32715 R similar to Y. pestis YPCD1.24c; hypothetical protein complement(32524..32715) Yersinia pseudotuberculosis IP 32953 2952938 YP_068455.1 CDS pYV0046 NC_006153.2 32890 33189 D similar to Y. pestis YPCD1.25; transposase remnant 32890..33189 Yersinia pseudotuberculosis IP 32953 2952939 YP_068456.1 CDS pYV0047 NC_006153.2 33232 34884 R similar to Y. pestis YPCD1.26c; yopM; targeted effector protein complement(33232..34884) Yersinia pseudotuberculosis IP 32953 2952940 YP_068457.1 CDS pYV0048 NC_006153.2 35009 35104 R hypothetical protein complement(35009..35104) Yersinia pseudotuberculosis IP 32953 2952941 YP_068458.1 CDS pYV0049 NC_006153.2 35209 35424 R hypothetical protein complement(35209..35424) Yersinia pseudotuberculosis IP 32953 2952942 YP_068459.1 CDS pYV0050 NC_006153.2 35445 35567 D hypothetical protein 35445..35567 Yersinia pseudotuberculosis IP 32953 2952943 YP_068460.1 CDS pYV0051 NC_006153.2 35593 35916 D similar to Y. pestis Y0056, similar to Y. intermedia transposase; hypothetical protein 35593..35916 Yersinia pseudotuberculosis IP 32953 2952944 YP_068461.1 CDS pYV0052 NC_006153.2 35951 36073 D similar to N-term Y. pestis YPCD1.24c, possible transposase remnant; hypothetical protein 35951..36073 Yersinia pseudotuberculosis IP 32953 2952945 YP_068462.1 CDS pYV0053 NC_006153.2 36160 36327 D hypothetical protein 36160..36327 Yersinia pseudotuberculosis IP 32953 2952946 YP_068463.1 CDS pYV0054 NC_006153.2 36551 37471 R similar to Y. pestis YPCD1.28c; yopD; Yop negative regulation/targeting component complement(36551..37471) Yersinia pseudotuberculosis IP 32953 2952947 YP_068464.1 CDS pYV0055 NC_006153.2 37490 38695 R similar to Y. pestis YPCD1.29c; yopB; Yop targeting protein complement(37490..38695) Yersinia pseudotuberculosis IP 32953 2952948 YP_068465.1 CDS pYV0056 NC_006153.2 38673 39179 R similar to Y. pestis YPCD1.30c; lcrH, sycD; low calcium response protein H complement(38673..39179) Yersinia pseudotuberculosis IP 32953 2952949 YP_068466.1 CDS pYV0057 NC_006153.2 39192 40172 R similar to Y. pestis YPCD1.31c; lcrV; V antigen, antihost protein/regulator complement(39192..40172) Yersinia pseudotuberculosis IP 32953 2952950 YP_068467.1 CDS pYV0058 NC_006153.2 40174 40461 R similar to Y. pestis YPCD1.32c; lcrG; Yop regulator complement(40174..40461) Yersinia pseudotuberculosis IP 32953 2952951 YP_068468.1 CDS pYV0059 NC_006153.2 40503 40943 R similar to Y. pestis YPCD1.33c; hypothetical protein complement(40503..40943) Yersinia pseudotuberculosis IP 32953 2952952 YP_068469.1 CDS pYV0060 NC_006153.2 40940 43054 R similar to Y. pestis YPCD1.34c; lcrD, yscV; membrane-bound Yop protein complement(40940..43054) Yersinia pseudotuberculosis IP 32953 2952953 YP_068470.1 CDS pYV0061 NC_006153.2 43041 43385 R similar to Y. pestis YPCD1.35c; yscY; type III secretion protein complement(43041..43385) Yersinia pseudotuberculosis IP 32953 2952954 YP_068471.1 CDS pYV0062 NC_006153.2 43382 43750 R similar to Y. pestis YPCD1.36c; yscX; type III secretion protein complement(43382..43750) Yersinia pseudotuberculosis IP 32953 2952955 YP_068472.1 CDS pYV0063 NC_006153.2 43747 44118 R similar to Y. pestis YPCD1.37c; sycN; type III secretion protein complement(43747..44118) Yersinia pseudotuberculosis IP 32953 2952956 YP_068473.1 CDS pYV0064 NC_006153.2 44105 44383 R similar to Y. pestis YPCD1.38c; tyeA; Yop secretion and targeting protein complement(44105..44383) Yersinia pseudotuberculosis IP 32953 2952957 YP_068474.1 CDS pYV0065 NC_006153.2 44364 45245 R similar to Y. pestis YPCD1.39c; yopN, lcrE; membrane-bound Yop targeting protein complement(44364..45245) Yersinia pseudotuberculosis IP 32953 2952958 YP_068475.1 CDS pYV0066 NC_006153.2 45305 45409 D hypothetical protein 45305..45409 Yersinia pseudotuberculosis IP 32953 2952959 YP_068476.1 CDS pYV0067 NC_006153.2 45443 46762 D identical to Y. pestis YPCD1.40; type III secretion system ATPase 45443..46762 Yersinia pseudotuberculosis IP 32953 2952960 YP_068477.1 CDS pYV0068 NC_006153.2 46759 47223 D identical to Y. pestis YPCD1.41; yscO; type III secretion protein 46759..47223 Yersinia pseudotuberculosis IP 32953 2952961 YP_068478.2 CDS pYV0069 NC_006153.2 47223 48590 D similar to Y. pestis YPCD1.42; yscP; type III secretion protein 47223..48590 Yersinia pseudotuberculosis IP 32953 2952962 YP_068479.1 CDS pYV0070 NC_006153.2 48587 49510 D identical to Y. pestis YPCD1.43; type III secretion system protein 48587..49510 Yersinia pseudotuberculosis IP 32953 2952963 YP_068480.1 CDS pYV0071 NC_006153.2 49507 50160 D part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 49507..50160 Yersinia pseudotuberculosis IP 32953 2952964 YP_068481.1 CDS pYV0072 NC_006153.2 50162 50428 D identical to Y. pestis YPCD1.45; yscS; type III secretion protein 50162..50428 Yersinia pseudotuberculosis IP 32953 2952965 YP_068482.1 CDS pYV0073 NC_006153.2 50425 51210 D identical to Y. pestis YPCD1.46; yscT; type III secretion protein 50425..51210 Yersinia pseudotuberculosis IP 32953 2952966 YP_068483.1 CDS pYV0074 NC_006153.2 51210 52274 D identical to Y. pestis YPCD1.47; yscU; type III secretion protein 51210..52274 Yersinia pseudotuberculosis IP 32953 2952967 YP_068484.1 CDS pYV0075 NC_006153.2 52850 53245 D similar to Y. pestis YPCD1.48; virG; Yop targeting lipoprotein 52850..53245 Yersinia pseudotuberculosis IP 32953 2952968 YP_068485.1 CDS pYV0076 NC_006153.2 53369 54184 D identical to Y. pestis YPCD1.49; lcrF, virF; thermoregulatory protein 53369..54184 Yersinia pseudotuberculosis IP 32953 2952969 YP_068486.1 CDS pYV0077 NC_006153.2 54263 54361 D similar to Y. pestis YPCD1.50; hypothetical protein 54263..54361 Yersinia pseudotuberculosis IP 32953 2952970 YP_068487.1 CDS pYV0078 NC_006153.2 54587 55000 D identical to Y. pestis YPCD1.51; hypothetical protein 54587..55000 Yersinia pseudotuberculosis IP 32953 2952971 YP_068488.1 CDS pYV0079 NC_006153.2 55006 56829 D similar to Y. pestis YPCD1.52; yscC; type III secretion protein 55006..56829 Yersinia pseudotuberculosis IP 32953 2952972 YP_068489.1 CDS pYV0080 NC_006153.2 56826 58085 D similar to Y. pestis YPCD1.53; yscD; type III secretion protein 56826..58085 Yersinia pseudotuberculosis IP 32953 2952973 YP_068490.1 CDS pYV0081 NC_006153.2 58082 58282 D similar to Y. pestis YPCD1.54; yscE; type III secretion protein 58082..58282 Yersinia pseudotuberculosis IP 32953 2952974 YP_068491.1 CDS pYV0082 NC_006153.2 58283 58546 D identical to Y. pestis YPCD1.55; yscF; type III secretion protein 58283..58546 Yersinia pseudotuberculosis IP 32953 2952975 YP_068492.1 CDS pYV0083 NC_006153.2 58548 58895 D similar to Y. pestis YPCD1.56; yscG; type III secretion protein 58548..58895 Yersinia pseudotuberculosis IP 32953 2952976 YP_068493.1 CDS pYV0084 NC_006153.2 58892 59389 D similar to Y. pestis YPCD1.57; yscH, yopR, lcrP; type III secretion protein 58892..59389 Yersinia pseudotuberculosis IP 32953 2952977 YP_068494.1 CDS pYV0085 NC_006153.2 59390 59737 D identical to Y. pestis YPCD1.58; yscI, lcrO; type III secretion protein 59390..59737 Yersinia pseudotuberculosis IP 32953 2952978 YP_068495.1 CDS pYV0086 NC_006153.2 59744 60478 D similar to Y. pestis YPCD1.59; yscJ, ylpB; type III secretion lipoprotein 59744..60478 Yersinia pseudotuberculosis IP 32953 2952979 YP_068496.1 CDS pYV0087 NC_006153.2 60457 61107 D identical to Y. pestis YPCD1.60; yscK; type III secretion protein 60457..61107 Yersinia pseudotuberculosis IP 32953 2952980 YP_068497.1 CDS pYV0088 NC_006153.2 61086 61718 D similar to Y. pestis YPCD1.61; type III secretion system protein 61086..61718 Yersinia pseudotuberculosis IP 32953 2952981 YP_068498.1 CDS pYV0089 NC_006153.2 61943 62290 D identical to Y. pestis YPCD1.62; yscM, lcrQ; type III secretion regulatory 61943..62290 Yersinia pseudotuberculosis IP 32953 2952982 YP_068499.1 CDS pYV0090 NC_006153.2 62838 63104 D identical to Y. pestis YPCD1.63; transposase 62838..63104 Yersinia pseudotuberculosis IP 32953 2952983 YP_068500.1 CDS pYV0091 NC_006153.2 63140 63562 D similar to Y. pestis YPCD1.64; transposase 63140..63562 Yersinia pseudotuberculosis IP 32953 2952984 YP_068501.1 CDS pYV0092 NC_006153.2 63559 63960 D similar to Y. pestis YPCD1.65; transposase 63559..63960 Yersinia pseudotuberculosis IP 32953 2952985 YP_068502.1 CDS pYV0093 NC_006153.2 63966 64145 D similar to Y. pestis YPCD1.66; transposase 63966..64145 Yersinia pseudotuberculosis IP 32953 2952986 YP_068503.1 CDS pYV0094 NC_006153.2 64366 65772 R similar to Y. pestis YPCD1.67c; yopH; protein-tyrosine phosphatase Yop effector complement(64366..65772) Yersinia pseudotuberculosis IP 32953 2952987 YP_068504.1 CDS pYV0095 NC_006153.2 66153 66689 D similar to Y. pestis YPCD1.69; transposase 66153..66689 Yersinia pseudotuberculosis IP 32953 2952988 YP_068505.1 CDS pYV0096 NC_006153.2 66691 66819 R similar to Y. pestis YPCD1.70c; IS630 family transposase complement(66691..66819) Yersinia pseudotuberculosis IP 32953 2952989 YP_068506.1 CDS pYV0097 NC_006153.2 66902 66994 R hypothetical protein complement(66902..66994) Yersinia pseudotuberculosis IP 32953 2952990 YP_068507.1 CDS pYV0098 NC_006153.2 67275 68141 R similar to Y. pestis YPCD1.71c; yopP, yopJ; targeted effector protein complement(67275..68141) Yersinia pseudotuberculosis IP 32953 2952991 YP_068508.1 CDS pYV0099 NC_006153.2 68142 68276 R hypothetical protein complement(68142..68276) Yersinia pseudotuberculosis IP 32953 2952992 YP_068509.1 CDS rep NC_006154.1 202 1188 D similar to Q7X3W4 RepA. Erwinia sp. Ejp 556. Score = 326 bits (835), Expect = 3e-88 Identities = 160/324 (49%); plasmid replication protein 202..1188 Yersinia pseudotuberculosis IP 32953 2953023 YP_068510.1 CDS pYptb0002 NC_006154.1 1316 1624 D hypothetical protein 1316..1624 Yersinia pseudotuberculosis IP 32953 2952993 YP_068511.1 CDS pYptb0003 NC_006154.1 1910 2137 D hypothetical protein 1910..2137 Yersinia pseudotuberculosis IP 32953 2952994 YP_068512.1 CDS triA NC_006154.1 2572 3189 D similar to CAD58562 TriA protein. Yersinia enterocolitica. Score = 254 bits (649), Expect = 5e-67 Identities = 128/221 (57%); TriA protein 2572..3189 Yersinia pseudotuberculosis IP 32953 2953025 YP_068513.1 CDS triB NC_006154.1 3194 3487 D similar to CAD58563 TriB protein. Yersinia enterocolitica. Score = 97.4 bits (241), Expect = 3e-20 Identities = 49/94 (52%); TriB protein 3194..3487 Yersinia pseudotuberculosis IP 32953 2953026 YP_068514.1 CDS triC NC_006154.1 3506 6253 D similar to CAD58564 TriC protein. Yersinia enterocolitica. Score = 1244 bits (3218), Expect = 0.0 Identities = 594/915 (64%); TriC protein 3506..6253 Yersinia pseudotuberculosis IP 32953 2953027 YP_068515.1 CDS triD NC_006154.1 6318 7031 D similar to CAD58565 TriD protein. Yersinia enterocolitica. Score = 227 bits (578), Expect = 1e-58 Identities = 124/242 (51%); TriD protein 6318..7031 Yersinia pseudotuberculosis IP 32953 2953028 YP_068516.1 CDS pYptb0008 NC_006154.1 7097 7348 D Antitoxin that counteracts the effect of the YoeB toxin; antitoxin YefM 7097..7348 Yersinia pseudotuberculosis IP 32953 2952995 YP_068517.1 CDS pYptb0009 NC_006154.1 7345 7599 D similar to P56605 Hypothetical protein yoeB. Escherichia coli, and Shigella flexneri. Score = 154 bits (389), Expect = 3e-37 Identities = 67/84 (79%; hypothetical protein 7345..7599 Yersinia pseudotuberculosis IP 32953 2952996 YP_068518.1 CDS pYptb0010 NC_006154.1 7718 7963 D similar to Q9RPN3 ORF4. Yersinia pestis. Score = 63.2 bits (152), Expect = 8e-10 Identities = 32/74 (43%; hypothetical protein 7718..7963 Yersinia pseudotuberculosis IP 32953 2952997 YP_068519.1 CDS triE NC_006154.1 7975 9015 D similar to CAD58566 TriE protein. Yersinia enterocolitica. Score = 295 bits (756), Expect = 5e-79 Identities = 150/332 (45%); TriE protein 7975..9015 Yersinia pseudotuberculosis IP 32953 2953029 YP_068520.1 CDS triG NC_006154.1 9186 9869 D similar to CAD58568 TriG protein. Yersinia enterocolitica. Score = 286 bits (733), Expect = 1e-76 Identities = 138/227 (60%); VirB8; TriG protein 9186..9869 Yersinia pseudotuberculosis IP 32953 2953030 YP_068521.1 CDS triH NC_006154.1 9869 10816 D similar to CAD58569 TriH protein. Yersinia enterocolitica. Score = 357 bits (915), Expect = 2e-97 Identities = 175/292 (59%; TriH protein 9869..10816 Yersinia pseudotuberculosis IP 32953 2953031 YP_068522.1 CDS triI NC_006154.1 10813 12045 D similar to CAD58570 TriI protein. Yersinia enterocolitica. Score = 387 bits (993), Expect = e-106 Identities = 206/415 (49%); TriI protein 10813..12045 Yersinia pseudotuberculosis IP 32953 2953032 YP_068523.1 CDS triJ NC_006154.1 12262 13275 D similar to CAD58571 TriJ protein. Yersinia enterocolitica. Score = 507 bits (1305), Expect = e-142 Identities = 241/335 (71%); TriJ protein 12262..13275 Yersinia pseudotuberculosis IP 32953 2953033 YP_068524.1 CDS pYptb0016 NC_006154.1 13272 13694 D similar to CAD58572 Hypothetical protein ORF29. Yersinia enterocolitica. Score = 136 bits (343), Expect = 4e-32 Identities = 66/134 (49%); hypothetical protein 13272..13694 Yersinia pseudotuberculosis IP 32953 2952998 YP_068525.1 CDS pYptb0017 NC_006154.1 14071 14376 D similar to Q9F518 YggA protein. Escherichia coli. Score = 81.3 bits (199), Expect = 3e-15 Identities = 39/85 (45%); hypothetical protein 14071..14376 Yersinia pseudotuberculosis IP 32953 2952999 YP_068526.1 CDS pYptb0018 NC_006154.1 14519 15769 D similar to Q8ZGB6 Putative exported protein (Putative outer membrane protein). Yersinia pestis. Score = 250 bits (639), Expect = 2e-65 Identities = 158/406 (38%); hypothetical protein 14519..15769 Yersinia pseudotuberculosis IP 32953 2953000 YP_068527.1 CDS pYptb0019 NC_006154.1 15826 16092 D hypothetical protein 15826..16092 Yersinia pseudotuberculosis IP 32953 2953001 YP_068528.1 CDS pYptb0020 NC_006154.1 16111 16524 D similar to CAD58574 DNA binding protein. Yersinia enterocolitica. Score = 97.4 bits (241), Expect = 3e-20 Identities = 55/135 (40%); IPR001801 Histone-like nucleoid-structuring protein H-NS; DNA-binding protein 16111..16524 Yersinia pseudotuberculosis IP 32953 2953002 YP_068529.1 CDS pYptb0021 NC_006154.1 16529 16801 D hypothetical protein 16529..16801 Yersinia pseudotuberculosis IP 32953 2953003 YP_068530.1 CDS pYptb0022 NC_006154.1 16823 16996 D hypothetical protein 16823..16996 Yersinia pseudotuberculosis IP 32953 2953004 YP_068531.1 CDS pYptb0023 NC_006154.1 17081 17212 D hypothetical protein 17081..17212 Yersinia pseudotuberculosis IP 32953 2953005 YP_068532.1 CDS pYptb0024 NC_006154.1 17219 17344 D hypothetical protein 17219..17344 Yersinia pseudotuberculosis IP 32953 2953006 YP_068533.1 CDS pYptb0025 NC_006154.1 17341 17463 D hypothetical protein 17341..17463 Yersinia pseudotuberculosis IP 32953 2953007 YP_068535.1 CDS pYptb0027 NC_006154.1 17550 17672 D hypothetical protein 17550..17672 Yersinia pseudotuberculosis IP 32953 2953009 YP_068536.1 CDS triK NC_006154.1 18485 20266 D similar to CAD58575 TriK protein. Yersinia enterocolitica. Score = 870 bits (2248), Expect = 0.0 Identities = 430/590 (72%); TriK protein 18485..20266 Yersinia pseudotuberculosis IP 32953 2953034 YP_068537.1 CDS triL NC_006154.1 20274 21014 D similar to CAD58576 TriL protein. Yersinia enterocolitica. Score = 327 bits (837), Expect = 1e-88 Identities = 158/234 (67%); TriL protein 20274..21014 Yersinia pseudotuberculosis IP 32953 2953035 YP_068538.1 CDS topB NC_006154.1 21070 23232 D similar to CAD58573 Topoisomerase. Yersinia enterocolitica. Score = 848 bits (2191), Expect = 0.0 Identities = 443/740 (59%); DNA topoisomerase III family protein 21070..23232 Yersinia pseudotuberculosis IP 32953 2953024 YP_068539.1 CDS pYptb0032 NC_006154.1 23291 23443 D hypothetical protein 23291..23443 Yersinia pseudotuberculosis IP 32953 2953011 YP_068540.1 CDS pYptb0033 NC_006154.1 23475 23636 D hypothetical protein 23475..23636 Yersinia pseudotuberculosis IP 32953 2953012 YP_068541.1 CDS pYptb0034 NC_006154.1 23751 23999 D hypothetical protein 23751..23999 Yersinia pseudotuberculosis IP 32953 2953013 YP_068542.1 CDS ArdC NC_006154.1 24036 25016 R similar to CAD58578 Antirestriction protein. Yersinia enterocolitica. Score = 457 bits (1176), Expect = e-128 Identities = 227/323 (70%); antirestriction protein complement(24036..25016) Yersinia pseudotuberculosis IP 32953 2953021 YP_068543.1 CDS pYptb0036 NC_006154.1 25339 25575 D similar to CAE15300 Hypothetical gene. Photorhabdus luminescens subsp. laumondii TTO1. Score = 68.9 bits (167), Expect = 1e-11 Identities = 36/65 (55%)none; hypothetical protein 25339..25575 Yersinia pseudotuberculosis IP 32953 2953014 YP_068544.1 CDS parA NC_006154.1 25627 26253 D similar to AB070224 parA partitioning protein [Serratiamarcescens] Expect = 9e-90 Identities = 172/209 (82%); IPR000707 ATPase, ParA type; plasmid partitioning protein 25627..26253 Yersinia pseudotuberculosis IP 32953 2953022 YP_068545.1 CDS pYptb0038 NC_006154.1 26274 26489 D similar to hypothetical proteins from several shuttle vectors, e.g. AF118810 Shuttle vector pME6010;Expect = 6e-19 Identities = 48/70 (68%); hypothetical protein 26274..26489 Yersinia pseudotuberculosis IP 32953 2953015 YP_068546.1 CDS pYptb0039 NC_006154.1 26513 26806 D hypothetical protein 26513..26806 Yersinia pseudotuberculosis IP 32953 2953016 YP_068547.1 CDS pYptb0040 NC_006154.1 26953 27099 D hypothetical protein 26953..27099 Yersinia pseudotuberculosis IP 32953 2953017 YP_068548.1 CDS pYptb0041 NC_006154.1 27120 27221 D hypothetical protein 27120..27221 Yersinia pseudotuberculosis IP 32953 2953018 YP_068549.1 CDS pYptb0042 NC_006154.1 27236 27382 D hypothetical protein 27236..27382 Yersinia pseudotuberculosis IP 32953 2953019 YP_068550.1 CDS pYptb0043 NC_006154.1 27458 27580 D hypothetical protein 27458..27580 Yersinia pseudotuberculosis IP 32953 2953020 YP_068551.1 CDS YPTB0001 NC_006155.1 270 710 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(270..710) Yersinia pseudotuberculosis IP 32953 2953036 YP_068552.1 CDS asnC NC_006155.1 803 1264 R transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC complement(803..1264) Yersinia pseudotuberculosis IP 32953 2955244 YP_068553.1 CDS asnA NC_006155.1 1434 2426 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1434..2426 Yersinia pseudotuberculosis IP 32953 2955242 YP_068554.1 CDS yieM NC_006155.1 2525 3991 R contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein complement(2525..3991) Yersinia pseudotuberculosis IP 32953 2953037 YP_068555.1 CDS YPTB0005 NC_006155.1 3995 5533 R interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA complement(3995..5533) Yersinia pseudotuberculosis IP 32953 2953038 YP_068556.1 CDS trkD NC_006155.1 5807 7675 D Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 5807..7675 Yersinia pseudotuberculosis IP 32953 2955928 YP_068557.1 CDS YPTB0007 NC_006155.1 7880 8299 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 7880..8299 Yersinia pseudotuberculosis IP 32953 2953039 YP_068558.1 CDS YPTB0008 NC_006155.1 8350 9276 D catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 8350..9276 Yersinia pseudotuberculosis IP 32953 2953040 YP_068559.1 CDS YPTB0009 NC_006155.1 9329 9499 D not present in pestis; hypothetical protein 9329..9499 Yersinia pseudotuberculosis IP 32953 2953041 YP_068560.1 CDS YPTB0010 NC_006155.1 9496 10920 R similar to Yersinia pestis YPO0009 membrane transport protein (100% evalue=0); Salmonella typhimurium STM3887 yieO; MFS family tranport protein (1st mdule) (74% evalue=0); MFS multidrug:H+ antiporter complement(9496..10920) Yersinia pseudotuberculosis IP 32953 2953042 YP_068561.1 CDS YPTB0011 NC_006155.1 11000 11689 R similar to Yersinia pestis YPO0010 GntR-famly transcriptional regulator (100% evalue=1.E-128); Escherichia coli Z5258 yieP; orf; Unknown function (67.6% evalue=5.E-85); GntR family transcriptional regulator complement(11000..11689) Yersinia pseudotuberculosis IP 32953 2953043 YP_068562.1 CDS YPTB0012 NC_006155.1 17956 19143 D similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (99.7% evalue=0); transposase 17956..19143 Yersinia pseudotuberculosis IP 32953 2953044 YP_068563.1 CDS mobB NC_006155.1 19223 19753 R in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(19223..19753) Yersinia pseudotuberculosis IP 32953 2956059 YP_068564.1 CDS YPTB0015 NC_006155.1 20495 20764 D similar to Yersinia pestis YPO0013a conserved hypothetical protein (100% evalue=3.E-46); Escherichia coli b3858 yihD; hypothetical 10.3 kD protein in mobA-dsbA intergenic region (O89) (76.4% evalue=2.E-35); hypothetical protein 20495..20764 Yersinia pseudotuberculosis IP 32953 2953045 YP_068565.1 CDS YPTB0016 NC_006155.1 20855 21841 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 20855..21841 Yersinia pseudotuberculosis IP 32953 2953046 YP_068566.1 CDS dsbA NC_006155.1 21869 22492 D similar to Yersinia pestis YPO0015 dsbA; secreted thiol:disulfide interchange protein DsbA (100% evalue=1.E-116); Salmonella typhimurium STM3997 dsbA; periplasmic protein disulfide isomerase I (75.8% evalue=1.E-88); protein disulfide isomerase 21869..22492 Yersinia pseudotuberculosis IP 32953 2955486 YP_068567.1 CDS polA NC_006155.1 22983 25781 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 22983..25781 Yersinia pseudotuberculosis IP 32953 2956294 YP_068568.1 CDS engB NC_006155.1 26189 26839 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(26189..26839) Yersinia pseudotuberculosis IP 32953 2953047 YP_068569.1 CDS YPTB0020 NC_006155.1 27604 28170 D similar to Yersinia pestis YPO0020 conserved hypothetical protein (100% evalue=1.E-103); Salmonella typhi STY3878 yihI; conserved hypothetical protein (51.9% evalue=1.E-43); hypothetical protein 27604..28170 Yersinia pseudotuberculosis IP 32953 2953048 YP_068570.1 CDS hemN NC_006155.1 28357 29730 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 28357..29730 Yersinia pseudotuberculosis IP 32953 2955782 YP_068571.1 CDS glnG NC_006155.1 29784 31196 R response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) complement(29784..31196) Yersinia pseudotuberculosis IP 32953 2956164 YP_068572.1 CDS glnL NC_006155.1 31204 32253 R sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) complement(31204..32253) Yersinia pseudotuberculosis IP 32953 2956163 YP_068573.1 CDS glnA NC_006155.1 32506 33915 R forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase complement(32506..33915) Yersinia pseudotuberculosis IP 32953 2955695 YP_068574.1 CDS bipA NC_006155.1 34478 36301 D similar to Yersinia pestis YPO0026 bipA, typA; GTPase (99.8% evalue=0); Salmonella typhimurium STM4009 typA; GTP-binding elongation factor family protein (89.1% evalue=0); GTPase 34478..36301 Yersinia pseudotuberculosis IP 32953 2955292 YP_068575.1 CDS YPTB0026 NC_006155.1 36623 37213 D similar to Yersinia pestis YPO0027 conserved hypothetical protein (100% evalue=1.E-110); Salmonella typhi STY3852 yihX; haloacid dehalogenase-like hydrolase (70.2% evalue=6.E-75); phosphatase 36623..37213 Yersinia pseudotuberculosis IP 32953 2953049 YP_068576.1 CDS rbn NC_006155.1 37310 38194 D RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 37310..38194 Yersinia pseudotuberculosis IP 32953 2956403 YP_068577.1 CDS YPTB0028 NC_006155.1 38201 38638 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 38201..38638 Yersinia pseudotuberculosis IP 32953 2953050 YP_068578.1 CDS YPTB0029 NC_006155.1 38824 39747 D similar to Yersinia pestis YPO0032 conserved membrane protein (100% evalue=1.E-178); Escherichia coli b3888 yiiD; hypothetical 37.1 kD protein in rbn-fdhE intergenic region (O329) (83.8% evalue=1.E-149); hypothetical protein 38824..39747 Yersinia pseudotuberculosis IP 32953 2953051 YP_068579.1 CDS YPTB0030 NC_006155.1 39882 41591 R similar to Yersinia pestis YPO0033 possible exported protein (100% evalue=0); Escherichia coli b3655 yicH; hypothetical 62.3 kD protein in gltS-selC intergenic region (49% evalue=1.E-164); hypothetical protein complement(39882..41591) Yersinia pseudotuberculosis IP 32953 2953052 YP_068580.1 CDS YPTB0031 NC_006155.1 41738 43123 R similar to Yersinia pestis YPO0034 membrane permease (99.3% evalue=0); Escherichia coli ECs4530 transport protein (84.4% evalue=0); NCS2 family xanthine/uracil:H+ symporter complement(41738..43123) Yersinia pseudotuberculosis IP 32953 2953053 YP_068581.1 CDS gltS NC_006155.1 43361 44575 D similar to Yersinia pestis YPO0035 gltS, gltC; sodium/glutamate symport carrier protein (100% evalue=0); Escherichia coli ECs4529 glutamate transport protein (82.4% evalue=0); sodium/glutamate symport carrier protein 43361..44575 Yersinia pseudotuberculosis IP 32953 2955724 YP_068582.1 CDS recG NC_006155.1 44941 47022 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(44941..47022) Yersinia pseudotuberculosis IP 32953 2956417 YP_068583.1 CDS trmH NC_006155.1 47023 47715 R specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase complement(47023..47715) Yersinia pseudotuberculosis IP 32953 2956737 YP_068584.1 CDS spoT NC_006155.1 47721 49829 R similar to Yersinia pestis YPO0038 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase (99.8% evalue=0); Escherichia coli JW3625 spoT; Guanosine 3',5'-bis(diphosphate) 3'-pyrophosphatase (91.4% evalue=0); bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase complement(47721..49829) Yersinia pseudotuberculosis IP 32953 2956629 YP_068585.1 CDS rpoZ NC_006155.1 49849 50124 R promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(49849..50124) Yersinia pseudotuberculosis IP 32953 2956528 YP_068586.1 CDS gmk NC_006155.1 50179 50802 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(50179..50802) Yersinia pseudotuberculosis IP 32953 2955731 YP_068587.1 CDS ligB NC_006155.1 51203 52906 D this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 51203..52906 Yersinia pseudotuberculosis IP 32953 2953054 YP_068588.1 CDS YPTB0039 NC_006155.1 52926 53543 R similar to Yersinia pestis YPO0042 membrane protein (99.4% evalue=2.E-98); Escherichia coli b3646 yicG; hypothetical 22.0 kD protein in rph-gmk intergenic region precursor (73.6% evalue=2.E-82); hypothetical protein complement(52926..53543) Yersinia pseudotuberculosis IP 32953 2953055 YP_068589.1 CDS YPTB0040 NC_006155.1 54064 54927 R similar to Yersinia pestis YPO0043 conserved hypothetical protein (100% evalue=1.E-157); Salmonella typhi STY4059 conserved hypothetical protein (87.8% evalue=1.E-140); hypothetical protein complement(54064..54927) Yersinia pseudotuberculosis IP 32953 2953056 YP_068590.1 CDS rph NC_006155.1 55054 55770 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 55054..55770 Yersinia pseudotuberculosis IP 32953 2956483 YP_068591.1 CDS pyrE NC_006155.1 55937 56584 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 55937..56584 Yersinia pseudotuberculosis IP 32953 2956387 YP_068592.1 CDS slmA NC_006155.1 56719 57315 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(56719..57315) Yersinia pseudotuberculosis IP 32953 2956841 YP_068593.1 CDS dut NC_006155.1 57437 57892 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(57437..57892) Yersinia pseudotuberculosis IP 32953 2955490 YP_068594.2 CDS dfp NC_006155.1 57873 59087 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(57873..59087) Yersinia pseudotuberculosis IP 32953 2955455 YP_068595.1 CDS radC NC_006155.1 59284 59952 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 59284..59952 Yersinia pseudotuberculosis IP 32953 2956398 YP_068596.1 CDS rpmB NC_006155.1 60215 60451 D required for 70S ribosome assembly; 50S ribosomal protein L28 60215..60451 Yersinia pseudotuberculosis IP 32953 2956511 YP_068597.1 CDS rpmG NC_006155.1 60463 60630 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 60463..60630 Yersinia pseudotuberculosis IP 32953 2956516 YP_068598.1 CDS mutM NC_006155.1 60713 61522 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 60713..61522 Yersinia pseudotuberculosis IP 32953 2956108 YP_068599.1 CDS coaD NC_006155.1 61528 62007 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(61528..62007) Yersinia pseudotuberculosis IP 32953 2955343 YP_068600.1 CDS kdtX NC_006155.1 62004 62786 R similar to Yersinia pestis YPO0054 kdtX, waaE; lipopolysaccharide core biosynthesis glycosyl transferase (100% evalue=1.E-149); Vibrio cholerae VC0224 lipopolysaccharide biosynthesis glycosyltransferase, (52.2% evalue=6.E-66); lipopolysaccharide core biosynthesis glycosyl transferase complement(62004..62786) Yersinia pseudotuberculosis IP 32953 2955921 YP_068601.1 CDS kdtA NC_006155.1 62787 64064 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(62787..64064) Yersinia pseudotuberculosis IP 32953 2955920 YP_068602.1 CDS rfaC NC_006155.1 64484 65449 R similar to Yersinia pestis YPO0056 rfaC, waaC, rfa-2; lipopolysaccharide heptosyltransferase-1 (100% evalue=0); Escherichia coli b3621 rfaC, rfa-2; lipopolysaccharide heptosyltransferase-1 (68.3% evalue=1.E-127); ADP-heptose--LPS heptosyltransferase complement(64484..65449) Yersinia pseudotuberculosis IP 32953 2956426 YP_068603.1 CDS rfaF NC_006155.1 65449 66513 R catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase complement(65449..66513) Yersinia pseudotuberculosis IP 32953 2956429 YP_068604.1 CDS rfaD NC_006155.1 66544 67476 R catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase complement(66544..67476) Yersinia pseudotuberculosis IP 32953 2956427 YP_068605.1 CDS kbl NC_006155.1 67722 68933 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 67722..68933 Yersinia pseudotuberculosis IP 32953 2955909 YP_068606.1 CDS tdh NC_006155.1 68943 69968 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 68943..69968 Yersinia pseudotuberculosis IP 32953 2956673 YP_068607.1 CDS yibQ NC_006155.1 70106 71116 R similar to Salmonella typhi STY4089 exported protein (63.6% evalue=1.E-106); Salmonella typhimurium STM3706 yigQ; periplasmic protein (64% evalue=1.E-105); hypothetical protein complement(70106..71116) Yersinia pseudotuberculosis IP 32953 2957073 YP_068608.2 CDS YPTB0059 NC_006155.1 71140 72510 R similar to Yersinia pestis YPO0063 membrane protein (99.5% evalue=0); Salmonella typhimurium STM3705 yibP; paral membrane protein (65.7% evalue=1.E-150); hypothetical protein complement(71140..72510) Yersinia pseudotuberculosis IP 32953 2953057 YP_068609.1 CDS YPTB0060 NC_006155.1 72520 74067 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(72520..74067) Yersinia pseudotuberculosis IP 32953 2953058 YP_068610.1 CDS YPTB0061 NC_006155.1 74465 74899 D similar to Yersinia pestis YPO0065 membrane protein (100% evalue=1.E-76); Salmonella typhi STY4092 secreted protein (67.8% evalue=2.E-52); hypothetical protein 74465..74899 Yersinia pseudotuberculosis IP 32953 2953059 YP_068611.1 CDS grxC NC_006155.1 75018 75266 D similar to Yersinia pestis YPO0066 grxC; glutaredoxin (100% evalue=3.E-43); Salmonella typhi STY4093 grxC; glutaredoxin 3 (85.3% evalue=5.E-36); glutaredoxin 3 75018..75266 Yersinia pseudotuberculosis IP 32953 2955749 YP_068612.1 CDS secB NC_006155.1 75354 75830 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 75354..75830 Yersinia pseudotuberculosis IP 32953 2956582 YP_068613.1 CDS gpsA NC_006155.1 75830 76849 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 75830..76849 Yersinia pseudotuberculosis IP 32953 2955741 YP_068614.1 CDS YPTB0065 NC_006155.1 76909 77049 D similar to Yersinia pestis YPO0069 hypothetical protein.; hypothetical protein 76909..77049 Yersinia pseudotuberculosis IP 32953 2953060 YP_068615.1 CDS cysE NC_006155.1 77115 77936 D catalyzes the O-acetylation of serine; serine acetyltransferase 77115..77936 Yersinia pseudotuberculosis IP 32953 2955402 YP_068616.1 CDS YPTB0067 NC_006155.1 78059 78547 R similar to Yersinia pestis YPO0071 methyltransferase (99.3% evalue=1.E-90); Escherichia coli JW3581 yibK; Hypothetical tRNA/rRNA methyltransferase (79.6% evalue=2.E-71); methyltransferase complement(78059..78547) Yersinia pseudotuberculosis IP 32953 2953061 YP_068617.1 CDS YPTB0068 NC_006155.1 78736 79800 D similar to Yersinia pestis YPO0072 bifunctional regulatory protein/DNA repair protein (98.5% evalue=0); Ralstonia solanacearum RS00768 ada, RSc2570; methylated-DNA-protein-cysteine methyltransferase O-6-methylguanine-DNA transcription regulator (64.8% evalue=1.E-127); bifunctional regulatory protein/DNA repair protein 78736..79800 Yersinia pseudotuberculosis IP 32953 2953062 YP_068618.1 CDS cpxA NC_006155.1 79868 81244 R part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein complement(79868..81244) Yersinia pseudotuberculosis IP 32953 2955353 YP_068619.1 CDS cpxR NC_006155.1 81241 81939 R response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR complement(81241..81939) Yersinia pseudotuberculosis IP 32953 2955355 YP_068620.1 CDS cpxP NC_006155.1 82113 82601 D repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; periplasmic stress adaptor protein CpxP 82113..82601 Yersinia pseudotuberculosis IP 32953 2955354 YP_068621.1 CDS YPTB0072 NC_006155.1 83279 84238 D similar to Yersinia pestis YPO0076 conserved hypothetical protein (99.6% evalue=0); Salmonella typhimurium PSLT051 samB; cytoplasmic protein (62% evalue=1.E-108); hypothetical protein 83279..84238 Yersinia pseudotuberculosis IP 32953 2953063 YP_068622.1 CDS fieF NC_006155.1 84800 85702 D member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 84800..85702 Yersinia pseudotuberculosis IP 32953 2953064 YP_068623.1 CDS pfkA NC_006155.1 85920 86903 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 85920..86903 Yersinia pseudotuberculosis IP 32953 2956238 YP_068624.1 CDS sbp1 NC_006155.1 87124 88113 D similar to Yersinia pestis YPO0079 sbp1; exported sulfate-binding protein (98.7% evalue=0); Escherichia coli JW3888 sbp; Periplasmic sulphate binding protein (83.5% evalue=1.E-162); sulfate transporter subunit 87124..88113 Yersinia pseudotuberculosis IP 32953 2956574 YP_068625.1 CDS YPTB0076 NC_006155.1 88363 89139 R similar to Yersinia pestis YPO0080 hypothetical protein (99.6% evalue=1.E-137); Bacillus subtilis BG14094 yvgL, yvsD; molybdate transport system substrate-binding protein (21.9% evalue=9.E-09); molybdate ABC transporter periplasmic-binding protein complement(88363..89139) Yersinia pseudotuberculosis IP 32953 2953065 YP_068626.1 CDS YPTB0077 NC_006155.1 89257 90684 R similar to Yersinia pestis YPO0081 membrane transport protein (100% evalue=0); Escherichia coli ECs0798 membrane pump protein (52.2% evalue=1.E-142); DASS family 2-oxoglutarate/malate:Na+ antiporter complement(89257..90684) Yersinia pseudotuberculosis IP 32953 2953066 YP_068627.1 CDS YPTB0078 NC_006155.1 90750 91463 R similar to Yersinia pestis YPO0082 possible transferase (100% evalue=1.E-131); Sinorhizobium meliloti SMc00502 conserved hypothetical protein (58.1% evalue=3.E-70); hypothetical protein complement(90750..91463) Yersinia pseudotuberculosis IP 32953 2953067 YP_068628.1 CDS YPTB0079 NC_006155.1 91460 92197 R similar to Yersinia pestis YPO0083 hypothetical protein (100% evalue=1.E-142); Sinorhizobium meliloti SMc00503 conserved hypothetical protein (65.4% evalue=3.E-89); hypothetical protein complement(91460..92197) Yersinia pseudotuberculosis IP 32953 2953068 YP_068629.1 CDS YPTB0080 NC_006155.1 92334 93569 D similar to Yersinia pestis YPO0084 possible transcriptional regulator (99.1% evalue=0); Sinorhizobium meliloti SMc00504 transcription regulator protein (26.3% evalue=9.E-34); transcriptional regulator 92334..93569 Yersinia pseudotuberculosis IP 32953 2953069 YP_068630.1 CDS tpiA NC_006155.1 93800 94567 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(93800..94567) Yersinia pseudotuberculosis IP 32953 2956726 YP_068631.1 CDS YPTB0082 NC_006155.1 94696 95331 R similar to Yersinia pestis YPO0086 exported protein (99.5% evalue=1.E-114); Salmonella typhi STY3788 yiiQ; conserved hypothetical protein (57.2% evalue=2.E-54); hypothetical protein complement(94696..95331) Yersinia pseudotuberculosis IP 32953 2953070 YP_068632.1 CDS YPTB0083 NC_006155.1 95479 95913 D similar to Yersinia pestis YPO0087 conserved membrane protein (100% evalue=2.E-84); Escherichia coli b3921 yiiR; hypothetical 16.5 kD protein in tpiA-fpr intergenic region (O146) (66.6% evalue=3.E-55); hypothetical protein 95479..95913 Yersinia pseudotuberculosis IP 32953 2953071 YP_068633.1 CDS fpr NC_006155.1 96254 97000 R similar to Yersinia pestis YPO0088 fpr, mvrA; ferredoxin--NADP reductase (100% evalue=1.E-141); Salmonella typhi STY3786 fpr; ferredoxin--NADP reductase (77% evalue=1.E-110); ferredoxin-NADP reductase complement(96254..97000) Yersinia pseudotuberculosis IP 32953 2955637 YP_068634.1 CDS glpX NC_006155.1 97155 98165 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(97155..98165) Yersinia pseudotuberculosis IP 32953 2955715 YP_068635.1 CDS glpK NC_006155.1 98418 99941 R similar to Escherichia coli b3926 glpK; glycerol kinase (84.6% evalue=0); Escherichia coli Z5471 glpK; glycerol kinase (84.4% evalue=0); glycerol kinase complement(98418..99941) Yersinia pseudotuberculosis IP 32953 2955712 YP_068636.1 CDS glpF NC_006155.1 100118 100966 R similar to Yersinia pestis YPO0091 glpF; glycerol uptake facilitator protein (100% evalue=1.E-160); Escherichia coli ECs4852 glycerol facilitator protein (82.6% evalue=1.E-136); MIP family glycerol uptake facilitator protein GlpF complement(100118..100966) Yersinia pseudotuberculosis IP 32953 2955710 YP_068637.1 CDS YPTB0088 NC_006155.1 100976 101215 R similar to Yersinia pestis YPO0092 hypothetical protein; hypothetical protein complement(100976..101215) Yersinia pseudotuberculosis IP 32953 2953072 YP_068638.1 CDS YPTB0089 NC_006155.1 101610 101849 D similar to Yersinia pestis YPO0093 conserved hypothetical protein (100% evalue=1.E-37); Salmonella typhimurium STM4088 yiiU; cytoplasmic protein (77.2% evalue=4.E-27); hypothetical protein 101610..101849 Yersinia pseudotuberculosis IP 32953 2953073 YP_068639.1 CDS YPTB0090 NC_006155.1 102190 104304 R similar to Xylella fastidiosa XF1220 colicin V secretion ABC transporter ATP-binding protein (43.6% evalue=1.E-163); Pseudomonas aeruginosa PA4143 probable toxin transporter (44.9% evalue=1.E-172); ABC transporter permease/ATP-binding protein complement(102190..104304) Yersinia pseudotuberculosis IP 32953 2953074 YP_068640.1 CDS YPTB0091 NC_006155.1 104297 105589 R similar to Yersinia pestis YPO0099 exported protein (99.7% evalue=0); Pseudomonas aeruginosa PA4142 probable secretion protein (25.6% evalue=4.E-41); HlyD family (ABC transporter associated) multidrug efflux pump complement(104297..105589) Yersinia pseudotuberculosis IP 32953 2953075 YP_068641.1 CDS YPTB0092 NC_006155.1 105802 106041 D similar to Yersinia pestis YPO0100 hypothetical protein (98.7% evalue=4.E-37); hypothetical protein 105802..106041 Yersinia pseudotuberculosis IP 32953 2953076 YP_068642.1 CDS YPTB0093 NC_006155.1 106216 106365 D similar to Yersinia pestis YPO0101 hypothetical protein. 100% identical; hypothetical protein 106216..106365 Yersinia pseudotuberculosis IP 32953 2953077 YP_068643.1 CDS YPTB0094 NC_006155.1 106671 107255 D similar to Yersinia pestis YPO0102 exported protein (100% evalue=1.E-106); hypothetical protein 106671..107255 Yersinia pseudotuberculosis IP 32953 2953078 YP_068644.1 CDS menG NC_006155.1 107372 107857 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(107372..107857) Yersinia pseudotuberculosis IP 32953 2956017 YP_068645.1 CDS menA NC_006155.1 107999 108916 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(107999..108916) Yersinia pseudotuberculosis IP 32953 2956011 YP_068646.1 CDS hslU NC_006155.1 109151 110482 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(109151..110482) Yersinia pseudotuberculosis IP 32953 2955842 YP_068647.1 CDS hslV NC_006155.1 110553 111077 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(110553..111077) Yersinia pseudotuberculosis IP 32953 2955843 YP_068648.1 CDS ftsN NC_006155.1 111177 112022 R similar to Yersinia pestis YPO0107 ftsN, msgA; cell division protein (99.6% evalue=1.E-160); Salmonella typhimurium STM4093 ftsN; essential cell division protein (51% evalue=2.E-77); cell division protein FtsN complement(111177..112022) Yersinia pseudotuberculosis IP 32953 2955658 YP_068649.2 CDS cytR NC_006155.1 112088 113116 R negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR complement(112088..113116) Yersinia pseudotuberculosis IP 32953 2955418 YP_068650.1 CDS priA NC_006155.1 113469 115667 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(113469..115667) Yersinia pseudotuberculosis IP 32953 2956318 YP_068651.1 CDS rpmE NC_006155.1 115920 116135 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 115920..116135 Yersinia pseudotuberculosis IP 32953 2956514 YP_068652.1 CDS YPTB0103 NC_006155.1 116677 117132 R similar to Yersinia pestis YPO0112 conserved hypothetical protein (100% evalue=2.E-81); Ralstonia solanacearum RS01011 hypothetical transmembrane protein (57.5% evalue=2.E-45); hypothetical protein complement(116677..117132) Yersinia pseudotuberculosis IP 32953 2953079 YP_068653.1 CDS metJ NC_006155.1 117481 117798 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(117481..117798) Yersinia pseudotuberculosis IP 32953 2956027 YP_068654.1 CDS metB NC_006155.1 118176 119336 D catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 118176..119336 Yersinia pseudotuberculosis IP 32953 2956020 YP_068655.1 CDS metL NC_006155.1 119339 121774 D multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 119339..121774 Yersinia pseudotuberculosis IP 32953 2956029 YP_068656.1 CDS metF NC_006155.1 122007 122891 D MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 122007..122891 Yersinia pseudotuberculosis IP 32953 2956024 YP_068657.1 CDS ppc NC_006155.1 123720 126356 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(123720..126356) Yersinia pseudotuberculosis IP 32953 2956304 YP_068658.1 CDS argE NC_006155.1 126730 127899 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase complement(126730..127899) Yersinia pseudotuberculosis IP 32953 2955215 YP_068659.1 CDS argC NC_006155.1 128144 129148 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 128144..129148 Yersinia pseudotuberculosis IP 32953 2955214 YP_068660.1 CDS argB NC_006155.1 129331 130104 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 129331..130104 Yersinia pseudotuberculosis IP 32953 2955213 YP_068661.1 CDS argH NC_006155.1 130271 131644 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 130271..131644 Yersinia pseudotuberculosis IP 32953 2955217 YP_068662.1 CDS YPTB0113 NC_006155.1 132243 134735 D similar to Yersinia pestis YPO3923 TonB dependent receptor protein (99.5% evalue=0); Pseudomonas aeruginosa PA3408 hasR; heme acquisition protein HasR (45.7% evalue=0); TonB dependent receptor protein 132243..134735 Yersinia pseudotuberculosis IP 32953 2953080 YP_068663.1 CDS HasA NC_006155.1 134963 135580 D similar to Yersinia pestis YPO3922 hemophore HasA (98.5% evalue=1.E-115); Pseudomonas aeruginosa PA3407 hasAp; heme acquisition protein HasAp (30.3% evalue=9.E-18); heme acquisition hemophore HasA 134963..135580 Yersinia pseudotuberculosis IP 32953 2955768 YP_068664.1 CDS YPTB0115 NC_006155.1 135746 137554 D similar to Yersinia pestis YPO3920 ABC transporter protein (99.6% evalue=0); Pseudomonas aeruginosa PA3406 hasD; transport protein HasD (58.4% evalue=0); ABC transporter permease/ATP-binding protein 135746..137554 Yersinia pseudotuberculosis IP 32953 2953081 YP_068665.1 CDS YPTB0116 NC_006155.1 137630 138958 D similar to Yersinia pestis YPO3919 HlyD family secretion protein (98.8% evalue=0); Pseudomonas aeruginosa PA3405 hasE; metalloprotease secretion protein (43.6% evalue=1.E-93); HlyD family secretion protein 137630..138958 Yersinia pseudotuberculosis IP 32953 2953082 YP_068666.1 CDS YPTB0117 NC_006155.1 139023 139826 D similar to Yersinia pestis YPO3918 membrane protein (98.8% evalue=1.E-147); C. jejuni Cj0181 tonB1; possible tonB transport protein (34.8% evalue=3.E-18); tonB protein 139023..139826 Yersinia pseudotuberculosis IP 32953 2953083 YP_068667.1 CDS YPTB0118 NC_006155.1 139942 141405 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(139942..141405) Yersinia pseudotuberculosis IP 32953 2953084 YP_068668.1 CDS YPTB0119 NC_006155.1 141499 142230 R similar to Yersinia pestis YPO3916 peroxiredoxin/glutaredoxin family protein (100% evalue=1.E-141); Vibrio cholerae VC2637 peroxiredoxin family protein/glutaredoxin (81.3% evalue=1.E-117); peroxiredoxin/glutaredoxin family protein complement(141499..142230) Yersinia pseudotuberculosis IP 32953 2953085 YP_068669.1 CDS oxyR NC_006155.1 142377 143294 D Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 142377..143294 Yersinia pseudotuberculosis IP 32953 2956202 YP_068670.1 CDS sthA NC_006155.1 143277 144677 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(143277..144677) Yersinia pseudotuberculosis IP 32953 2956644 YP_068671.1 CDS trmA NC_006155.1 144883 145530 D negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 144883..145530 Yersinia pseudotuberculosis IP 32953 2956734 YP_068672.1 CDS yijD NC_006155.1 145543 145950 D similar to Yersinia pestis YPO3912 yijD; membrane protein (100% evalue=3.E-71); Salmonella typhimurium STM4128 yijD; inner membrane protein (70.7% evalue=1.E-41); hypothetical protein 145543..145950 Yersinia pseudotuberculosis IP 32953 2957079 YP_068673.1 CDS trmA NC_006155.1 146084 147187 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(146084..147187) Yersinia pseudotuberculosis IP 32953 2956735 YP_068674.2 CDS btuB NC_006155.1 147649 149541 D involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 147649..149541 Yersinia pseudotuberculosis IP 32953 2953086 YP_068675.1 CDS murI NC_006155.1 149486 150349 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 149486..150349 Yersinia pseudotuberculosis IP 32953 2956105 YP_068676.1 CDS YPTB0127 NC_006155.1 157214 158170 D similar to Yersinia pestis YPO3908 periplasmic protein precursor (99.6% evalue=1.E-175); Escherichia coli JW4186 ytfQ; Hypothetical ABC transporter periplasmic binding protein (75.7% evalue=1.E-134); ribose/sugar ABC transporter substrate-binding protein 157214..158170 Yersinia pseudotuberculosis IP 32953 2953087 YP_068677.1 CDS YPTB0128 NC_006155.1 158256 159746 D similar to Yersinia pestis YPO3907 sugar transport system ATP-binding protein (99.7% evalue=0); Escherichia coli Z5839 ATP-binding component of ABC transporter (67.4% evalue=0); sugar ABC transporter ATPase 158256..159746 Yersinia pseudotuberculosis IP 32953 2953088 YP_068678.1 CDS YPTB0129 NC_006155.1 159758 160777 D similar to Yersinia pestis YPO3906 sugar transport system permease (100% evalue=0); Escherichia coli Z5840 ytfT; transport system permease (70.3% evalue=1.E-122); ribose/sugar ABC transporter permease domain 159758..160777 Yersinia pseudotuberculosis IP 32953 2953089 YP_068679.1 CDS YPTB0130 NC_006155.1 160777 161769 D membrane component of a sugar ABC transporter system; ABC transporter permease 160777..161769 Yersinia pseudotuberculosis IP 32953 2953090 YP_068680.1 CDS YPTB0131 NC_006155.1 161756 162637 R Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR complement(161756..162637) Yersinia pseudotuberculosis IP 32953 2953091 YP_068681.1 CDS YPTB0132 NC_006155.1 162756 163094 D similar to Yersinia pestis YPO3903 conserved hypothetical protein (100% evalue=3.E-62); Escherichia coli JW3737 yifE; Hypothetical protein (83% evalue=1.E-52); hypothetical protein 162756..163094 Yersinia pseudotuberculosis IP 32953 2953092 YP_068682.1 CDS YPTB0133 NC_006155.1 163475 164998 R similar to Yersinia pestis YPO3902 magnesium chelatase family protein (99.8% evalue=0); Salmonella typhimurium STM3899 yifB; magnesium chelatase, subunit ChlI (62.7% evalue=0); magnesium chelatase family protein complement(163475..164998) Yersinia pseudotuberculosis IP 32953 2953093 YP_068683.1 CDS ilvG NC_006155.1 165622 167268 D catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 165622..167268 Yersinia pseudotuberculosis IP 32953 2955875 YP_068684.1 CDS ilvM NC_006155.1 167265 167522 D similar to Yersinia pestis YPO3900 ilvM; acetolactate synthase isozyme II small subunit (100% evalue=1.E-41); Escherichia coli Z5280 ilvM; acetolactate synthase II, valine insensitive, small subunit (67.8% evalue=2.E-24); acetolactate synthase 2 regulatory subunit 167265..167522 Yersinia pseudotuberculosis IP 32953 2955878 YP_068685.1 CDS ilvE NC_006155.1 167545 168471 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 167545..168471 Yersinia pseudotuberculosis IP 32953 2955874 YP_068686.1 CDS ilvD NC_006155.1 168782 170632 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 168782..170632 Yersinia pseudotuberculosis IP 32953 2955873 YP_068687.1 CDS ilvA NC_006155.1 170638 172182 D threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 170638..172182 Yersinia pseudotuberculosis IP 32953 2955870 YP_068688.1 CDS YPTB0139 NC_006155.1 172313 172777 R similar to Yersinia pestis YPO3935 membrane protein (72.7% evalue=2.E-63); hypothetical protein complement(172313..172777) Yersinia pseudotuberculosis IP 32953 2953094 YP_068689.1 CDS YPTB0140 NC_006155.1 172795 173259 R similar to Yersinia pestis YPO3894 membrane protein (82.4% evalue=2.E-70); hypothetical protein complement(172795..173259) Yersinia pseudotuberculosis IP 32953 2953095 YP_068690.1 CDS YPTB0141 NC_006155.1 173339 173800 R similar to Yersinia pestis YPO3894 membrane protein (94.7% evalue=5.E-83); hypothetical protein complement(173339..173800) Yersinia pseudotuberculosis IP 32953 2953096 YP_068691.1 CDS YPTB0142 NC_006155.1 173784 174662 R similar to Yersinia pestis YPO3983 conserved hypothetical protein (49.6% evalue=1.E-72); hypothetical protein complement(173784..174662) Yersinia pseudotuberculosis IP 32953 2953097 YP_068692.1 CDS YPTB0143 NC_006155.1 175310 175519 D similar to Yersinia pestis YPO3890 hypothetical protein. 100% identical; hypothetical protein 175310..175519 Yersinia pseudotuberculosis IP 32953 2953098 YP_068693.1 CDS ilvY NC_006155.1 175574 176455 R participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY complement(175574..176455) Yersinia pseudotuberculosis IP 32953 2955880 YP_068694.1 CDS ilvC NC_006155.1 176746 178224 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 176746..178224 Yersinia pseudotuberculosis IP 32953 2955872 YP_068695.1 CDS YPTB0147 NC_006155.1 180249 180512 D similar to Yersinia pestis YPO3885 hypothetical protein (100% evalue=4.E-45); hypothetical protein 180249..180512 Yersinia pseudotuberculosis IP 32953 2953100 YP_068696.1 CDS YPTB0149 NC_006155.1 181028 181282 D similar to Yersinia pestis YPO3883 imm; colicin immunity protein (49.4% evalue=1.E-21); Salmonella typhi STY3281 bacteriocin immunity protein (44.1% evalue=2.E-16); colicin immunity protein 181028..181282 Yersinia pseudotuberculosis IP 32953 2953102 YP_068697.1 CDS pys2 NC_006155.1 181435 181854 D similar to Yersinia pestis YPO3884 colicin (partial) (48% evalue=1.E-15); Pseudomonas aeruginosa PA1150 pys2; pyocin S2 (47.4% evalue=4.E-35); pyocin S2 (partial) 181435..181854 Yersinia pseudotuberculosis IP 32953 2956392 YP_068698.1 CDS imm2 NC_006155.1 181856 182110 D similar to Yersinia pestis YPO3883 imm; colicin immunity protein (51.9% evalue=2.E-19); Pseudomonas aeruginosa PA1151 imm2; pyocin S2 immunity protein (60.4% evalue=6.E-23); pyocin S2 immunity protein 181856..182110 Yersinia pseudotuberculosis IP 32953 2955882 YP_068699.1 CDS pys2 NC_006155.1 182263 182691 D similar to Yersinia pestis YPO3884 colicin (partial) (55.5% evalue=3.E-19); Pseudomonas aeruginosa PA1150 pys2; pyocin S2 (48.2% evalue=5.E-31); pyocin S2 (partial) 182263..182691 Yersinia pseudotuberculosis IP 32953 2956393 YP_068700.1 CDS imm NC_006155.1 182688 182951 D similar to Yersinia pestis YPO3883 imm; colicin immunity protein (50.5% evalue=5.E-19); Salmonella typhi STY3281 bacteriocin immunity protein (58.8% evalue=6.E-23); colicin immunity protein (E7) 182688..182951 Yersinia pseudotuberculosis IP 32953 2955881 YP_068701.1 CDS YPTB0154 NC_006155.1 183509 183880 D similar to Yersinia pestis YPO1234 probable phage antitermination protein Q (52.9% evalue=3.E-27); Salmonella typhimurium STM2239 phage protein; homology to antiterminator protein Q of phage P5 (40% evalue=4.E-19); phage antitermination protein Q 183509..183880 Yersinia pseudotuberculosis IP 32953 2953103 YP_068702.1 CDS YPTB0155 NC_006155.1 184491 184826 D not present in pestis; hypothetical protein 184491..184826 Yersinia pseudotuberculosis IP 32953 2953104 YP_068703.1 CDS YPTB0156 NC_006155.1 185085 185831 R similar to Yersinia pestis YPO3881 chaperone protein (99.5% evalue=1.E-137); Pseudomonas aeruginosa PA2132 probable pili assembly chaperone (46.4% evalue=2.E-43); chaperone protein complement(185085..185831) Yersinia pseudotuberculosis IP 32953 2953105 YP_068704.1 CDS YPTB0157 NC_006155.1 185869 187236 R similar to Yersinia pestis YPO3880 exported protein (100% evalue=0); Pseudomonas aeruginosa PA2131 hypothetical protein (44.6% evalue=9.E-94); hypothetical protein complement(185869..187236) Yersinia pseudotuberculosis IP 32953 2953106 YP_068705.1 CDS YPTB0158 NC_006155.1 187253 189904 R similar to Yersinia pestis YPO3879 outer membrane usher protein (98.8% evalue=0); Pseudomonas aeruginosa PA2130 probable fimbrial biogenesis usher protein (46.7% evalue=0); outer membrane fimbrial usher porin complement(187253..189904) Yersinia pseudotuberculosis IP 32953 2953107 YP_068706.1 CDS YPTB0159 NC_006155.1 189932 190663 R similar to Yersinia pestis YPO3878 fimbrial chaperone (99.5% evalue=1.E-134); Pseudomonas aeruginosa PA2129 probable pili assembly chaperone (44.1% evalue=3.E-49); fimbrial chaperone complement(189932..190663) Yersinia pseudotuberculosis IP 32953 2953108 YP_068707.1 CDS YPTB0160 NC_006155.1 190727 191257 R similar to Yersinia pestis YPO3877 fimbrial protein (100% evalue=8.E-93); Salmonella typhimurium STM0340 stbA; fimbriae; major subunit (49.1% evalue=2.E-37); fimbrial protein complement(190727..191257) Yersinia pseudotuberculosis IP 32953 2953109 YP_068708.1 CDS YPTB0161 NC_006155.1 192049 192840 R similar to Yersinia pestis YPO3874 exported protein (99.6% evalue=1.E-151); Caulobacter crescentus CC2650 glutamine cyclotransferase (37.6% evalue=5.E-42); hypothetical protein complement(192049..192840) Yersinia pseudotuberculosis IP 32953 2953110 YP_068709.1 CDS ppiC NC_006155.1 193079 193360 R similar to Yersinia pestis YPO3873 ppiC; peptidyl-prolyl cis-trans isomerase C (100% evalue=2.E-49); Escherichia coli JW3748 ppiC; peptidyl-prolyl cis/trans isomerases (67.7% evalue=4.E-31); peptidyl-prolyl cis-trans isomerase complement(193079..193360) Yersinia pseudotuberculosis IP 32953 2956308 YP_068710.1 CDS rep NC_006155.1 193564 195585 D single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 193564..195585 Yersinia pseudotuberculosis IP 32953 2956424 YP_068711.1 CDS YPTB0164 NC_006155.1 195753 197249 R catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase complement(195753..197249) Yersinia pseudotuberculosis IP 32953 2953111 YP_068712.1 CDS rhlB NC_006155.1 197253 198539 R enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB complement(197253..198539) Yersinia pseudotuberculosis IP 32953 2956445 YP_068713.1 CDS trxA NC_006155.1 198658 198984 D similar to Yersinia pestis YPO3868 trxA, tsnC, fipA; thioredoxin 1 (100% evalue=2.E-57); Escherichia coli JW3754 trxA; Thioredoxin (87% evalue=2.E-51); thioredoxin 198658..198984 Yersinia pseudotuberculosis IP 32953 2956836 YP_068714.1 CDS rho NC_006155.1 199464 200723 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 199464..200723 Yersinia pseudotuberculosis IP 32953 2956447 YP_068715.1 CDS rfe NC_006155.1 201257 202354 D similar to Yersinia pestis YPO3866 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (100% evalue=0); Escherichia coli ECs4717 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (80.9% evalue=1.E-166); undecaprenyl-phosphate alpha-GlcNAc transferase 201257..202354 Yersinia pseudotuberculosis IP 32953 2956431 YP_068716.1 CDS wzzE NC_006155.1 202390 203451 D Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 202390..203451 Yersinia pseudotuberculosis IP 32953 2956903 YP_068717.1 CDS rffE NC_006155.1 203800 204930 D similar to Yersinia pestis YPO3864 rffE, wecB, nfrC; UDP-N-acetylglucosamine 2-epimerase (99.7% evalue=0); Escherichia coli ECs4719 UDP-N-acetyl glucosamine -2-epimerase (78.6% evalue=1.E-172); UDP-N-acetylglucosamine 2-epimerase 203800..204930 Yersinia pseudotuberculosis IP 32953 2956435 YP_068718.1 CDS wecC NC_006155.1 204927 206189 D catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 204927..206189 Yersinia pseudotuberculosis IP 32953 2956434 YP_068719.1 CDS rffG NC_006155.1 206186 207253 D similar to Yersinia pestis YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase (99.4% evalue=0); Salmonella typhimurium STM3922 rffG; dTDP-glucose 4,6-dehydratase (83% evalue=1.E-175); dTDP-D-glucose-4,6-dehydratase 206186..207253 Yersinia pseudotuberculosis IP 32953 2956436 YP_068720.1 CDS rffH NC_006155.1 207548 208429 D similar to Yersinia pestis YPO3861 rffH; glucose-1-phosphate thymidylyltransferase (100% evalue=1.E-169); Escherichia coli b3789 rffH; glucose-1-phosphate thymidylyltransferase (dtdp-glucose synthase) (dtdp-glucose pyrophosphorylase) (86.6% evalue=1.E-148); glucose-1-phosphate thymidylyltransferase 207548..208429 Yersinia pseudotuberculosis IP 32953 2956437 YP_068721.1 CDS rffC NC_006155.1 208476 209144 D similar to Yersinia pestis YPO3860 rffC, wecD; lipopolysaccharide biosynthesis protein (97.2% evalue=1.E-120); Escherichia coli JW3764 yifH; Hypothetical protein (49.2% evalue=6.E-44); TDP-fucosamine acetyltransferase 208476..209144 Yersinia pseudotuberculosis IP 32953 2956433 YP_068722.1 CDS rffA NC_006155.1 209146 210276 D catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 209146..210276 Yersinia pseudotuberculosis IP 32953 2956432 YP_068723.1 CDS wzxE NC_006155.1 210278 211534 D similar to Yersinia pestis YPO3858 wzxE, wzx; lipopolysaccharide biosynthesis protein (99.7% evalue=0); Salmonella typhi STY3629 lipopolysaccharide biosynthesis protein (75% evalue=0); PST family o-antigen export protein 210278..211534 Yersinia pseudotuberculosis IP 32953 2956901 YP_068724.1 CDS YPTB0177 NC_006155.1 211557 212642 D catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 211557..212642 Yersinia pseudotuberculosis IP 32953 2953112 YP_068725.1 CDS wecF NC_006155.1 212639 214003 D enterobacterial common antigen polymerase; common antigen polymerase 212639..214003 Yersinia pseudotuberculosis IP 32953 2956897 YP_068726.1 CDS wecG NC_006155.1 214012 214752 D similar to Yersinia pestis YPO3855 wecG, rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase (99.5% evalue=1.E-140); Escherichia coli b3794 wecg, rffM; (UDP-mannaca transferase) (71.1% evalue=1.E-101); UDP-N-acetyl-D-mannosaminuronic acid transferase 214012..214752 Yersinia pseudotuberculosis IP 32953 2956898 YP_068727.1 CDS YPTB0180 NC_006155.1 215316 216707 D uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter 215316..216707 Yersinia pseudotuberculosis IP 32953 2953113 YP_068728.1 CDS hemY NC_006155.1 218227 219447 R similar to Yersinia pestis YPO3852 hemY; protoheme IX biogenesis protein (99.7% evalue=0); Escherichia coli Z5316 hemY; a late step of protoheme IX synthesis (70.6% evalue=1.E-163); protoheme IX biogenesis protein complement(218227..219447) Yersinia pseudotuberculosis IP 32953 2955784 YP_068729.1 CDS hemX NC_006155.1 219450 220574 R similar to Yersinia pestis YPO3851 hemX; uroporphyrin-III C-methyltransferase (99.7% evalue=0); Escherichia coli JW3775 hemX; uroporphyrin-III C-methyltransferase (68.1% evalue=1.E-135); uroporphyrinogen III C-methyltransferase complement(219450..220574) Yersinia pseudotuberculosis IP 32953 2955783 YP_068730.1 CDS hemD NC_006155.1 220605 221354 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(220605..221354) Yersinia pseudotuberculosis IP 32953 2955776 YP_068731.1 CDS hemC NC_006155.1 221351 222292 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(221351..222292) Yersinia pseudotuberculosis IP 32953 2955775 YP_068732.1 CDS cyaA NC_006155.1 222786 225338 D catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 222786..225338 Yersinia pseudotuberculosis IP 32953 2955383 YP_068733.1 CDS YPTB0186 NC_006155.1 225858 227066 R similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase for IS285 insertion element complement(225858..227066) Yersinia pseudotuberculosis IP 32953 2953114 YP_068734.1 CDS cyaY NC_006155.1 228439 228762 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(228439..228762) Yersinia pseudotuberculosis IP 32953 2955385 YP_068735.1 CDS YPTB0189 NC_006155.1 228914 229114 D similar to Yersinia pestis YPO3846 lipoprotein. 90% identical; hypothetical protein 228914..229114 Yersinia pseudotuberculosis IP 32953 2953116 YP_068736.1 CDS dapF NC_006155.1 229282 230106 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 229282..230106 Yersinia pseudotuberculosis IP 32953 2955430 YP_068737.1 CDS YPTB0191 NC_006155.1 230171 230875 D similar to Yersinia pestis YPO3844 conserved hypothetical protein (100% evalue=1.E-130); Escherichia coli b3810 yigA; hypothetical 26.7 kD protein in dapF-xerC intergenic region (ORF 235) (67.5% evalue=3.E-83); hypothetical protein 230171..230875 Yersinia pseudotuberculosis IP 32953 2953117 YP_068738.1 CDS xerC NC_006155.1 230872 231783 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 230872..231783 Yersinia pseudotuberculosis IP 32953 2956906 YP_068739.1 CDS YPTB0193 NC_006155.1 231783 232499 D YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 231783..232499 Yersinia pseudotuberculosis IP 32953 2953118 YP_068740.1 CDS uvrD NC_006155.1 232598 234760 D unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 232598..234760 Yersinia pseudotuberculosis IP 32953 2956884 YP_068741.1 CDS YPTB0195 NC_006155.1 234874 235539 R similar to Yersinia pestis YPO3840 TetR-family regulatory protein (96% evalue=1.E-118); Mesorhizobium loti mll3386 transcriptional regulator (47.8% evalue=9.E-43); TetR family regulatory protein complement(234874..235539) Yersinia pseudotuberculosis IP 32953 2953119 YP_068742.1 CDS YPTB0196 NC_006155.1 235967 237199 D similar to Yersinia pestis YPO3839 conserved hypothetical protein (98.7% evalue=0); Sinorhizobium meliloti SMa1334 conserved hypothetical protein (55.7% evalue=1.E-121); hypothetical protein 235967..237199 Yersinia pseudotuberculosis IP 32953 2953120 YP_068743.1 CDS YPTB0197 NC_006155.1 237213 238055 D similar to Yersinia pestis YPO3838 conserved hypothetical protein (100% evalue=1.E-161); Sinorhizobium meliloti SMa1332 conserved hypothetical protein (71.6% evalue=1.E-109); hypothetical protein 237213..238055 Yersinia pseudotuberculosis IP 32953 2953121 YP_068744.1 CDS corA NC_006155.1 238705 239655 D responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 238705..239655 Yersinia pseudotuberculosis IP 32953 2955350 YP_068745.1 CDS rarD NC_006155.1 239753 240643 R similar to Yersinia pestis YPO3836 rarD; membrane protein (100% evalue=1.E-168); Salmonella typhimurium STM3955 rarD; chloramphenicol resistance (75.7% evalue=1.E-129); drug/metabolite transporter (DMT) superfamily protein RarD complement(239753..240643) Yersinia pseudotuberculosis IP 32953 2956401 YP_068746.1 CDS YPTB0200 NC_006155.1 240730 241200 R similar to Yersinia pestis YPO3835 conserved hypothetical protein (100% evalue=2.E-83); Escherichia coli b3820 yigI; hypothetical 17.1 kD protein in rarD-pldA intergenic region (66.8% evalue=2.E-55); hypothetical protein complement(240730..241200) Yersinia pseudotuberculosis IP 32953 2953122 YP_068747.1 CDS pldA NC_006155.1 241422 242300 D catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 241422..242300 Yersinia pseudotuberculosis IP 32953 2956276 YP_068748.1 CDS reqQ NC_006155.1 242377 244209 D functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 242377..244209 Yersinia pseudotuberculosis IP 32953 2956425 YP_068749.1 CDS rhtC NC_006155.1 244316 244936 D similar to Yersinia pestis YPO3832 rhtC; threonine efflux protein (100% evalue=1.E-116); Salmonella typhi STY3600 rhtC; threonine efflux protein (72.3% evalue=2.E-85); threonine efflux system 244316..244936 Yersinia pseudotuberculosis IP 32953 2956449 YP_068750.1 CDS rhtB NC_006155.1 244987 245607 R similar to Yersinia pestis YPO3831 rhtB; homoserine/homoserine lactone efflux protein (100% evalue=1.E-111); Escherichia coli ECs4754 homoserine/homoserine lactone effulux protein (75.4% evalue=5.E-88); homoserine/homoserine lactone efflux protein complement(244987..245607) Yersinia pseudotuberculosis IP 32953 2956448 YP_068751.1 CDS pldB NC_006155.1 245803 246816 D lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 245803..246816 Yersinia pseudotuberculosis IP 32953 2956277 YP_068752.1 CDS YPTB0206 NC_006155.1 246851 247660 D purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; sugar phosphatase 246851..247660 Yersinia pseudotuberculosis IP 32953 2953123 YP_068753.1 CDS YPTB0207 NC_006155.1 247936 249135 D similar to Yersinia pestis YPO3828 hypothetical protein (99.7% evalue=0); hypothetical protein 247936..249135 Yersinia pseudotuberculosis IP 32953 2953124 YP_068754.1 CDS glpQ NC_006155.1 249209 250324 R hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase complement(249209..250324) Yersinia pseudotuberculosis IP 32953 2955713 YP_068755.1 CDS glpA NC_006155.1 250949 252604 D anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 250949..252604 Yersinia pseudotuberculosis IP 32953 2955706 YP_068756.1 CDS glpB NC_006155.1 252594 253868 D sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 252594..253868 Yersinia pseudotuberculosis IP 32953 2955707 YP_068757.1 CDS glpC NC_006155.1 253865 255160 D anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 253865..255160 Yersinia pseudotuberculosis IP 32953 2955708 YP_068758.1 CDS drcB NC_006155.1 255304 255831 R similar to Yersinia pestis YPO3823 dcrB; lipoprotein (100% evalue=1.E-92); Salmonella typhimurium STM3580 inner membrane lipoprotein (58.6% evalue=5.E-56); hypothetical protein complement(255304..255831) Yersinia pseudotuberculosis IP 32953 2955485 YP_068759.1 CDS yhhQ NC_006155.1 255961 256629 R similar to Yersinia pestis YPO3822 yhhQ; membrane protein (99.5% evalue=1.E-123); Salmonella typhimurium STM3579 yhhQ; integral membrane protein (75.2% evalue=1.E-90); hypothetical protein complement(255961..256629) Yersinia pseudotuberculosis IP 32953 2957067 YP_068760.1 CDS YPTB0214 NC_006155.1 256913 257167 D TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 256913..257167 Yersinia pseudotuberculosis IP 32953 2953125 YP_068761.1 CDS zntA NC_006155.1 257232 259598 R P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase complement(257232..259598) Yersinia pseudotuberculosis IP 32953 2955266 YP_068762.1 CDS yhhN NC_006155.1 260012 260638 R similar to Yersinia pestis YPO3819 yhhN; membrane protein (100% evalue=1.E-117); Escherichia coli ECs4317 enzyme (66.8% evalue=4.E-78); hypothetical protein complement(260012..260638) Yersinia pseudotuberculosis IP 32953 2957066 YP_068763.1 CDS YPTB0217 NC_006155.1 260928 261248 D similar to Yersinia pestis YPO3818 conserved hypothetical protein (100% evalue=2.E-55); Pseudomonas aeruginosa PA3979 hypothetical protein (45.6% evalue=1.E-21); hypothetical protein 260928..261248 Yersinia pseudotuberculosis IP 32953 2953126 YP_068764.1 CDS YPTB0218 NC_006155.1 261460 261879 D similar to Yersinia pestis YPO3817 membrane protein (100% evalue=2.E-73); Salmonella typhimurium STM3574 yhhM; inner membrane protein (38.4% evalue=2.E-17); hypothetical protein 261460..261879 Yersinia pseudotuberculosis IP 32953 2953127 YP_068765.1 CDS yhhL NC_006155.1 262056 262328 R similar to Yersinia pestis YPO3816a yhhL; membrane protein (100% evalue=5.E-48); Escherichia coli b3466 yhhL; hypothetical 10.3 kD protein in ftsY-nikA intergenic region (64.2% evalue=2.E-25); hypothetical protein complement(262056..262328) Yersinia pseudotuberculosis IP 32953 2957065 YP_068766.1 CDS rsmD NC_006155.1 262318 262980 R catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase complement(262318..262980) Yersinia pseudotuberculosis IP 32953 2953128 YP_068767.1 CDS ftsY NC_006155.1 263262 264986 D similar to Yersinia pestis YPO3814 ftsY; cell division protein (93.2% evalue=0); Escherichia coli JW3429 ftsY; signal recognition particle (ffh and ffs) receptor (60.9% evalue=1.E-167); cell division protein 263262..264986 Yersinia pseudotuberculosis IP 32953 2955662 YP_068768.1 CDS ftsE NC_006155.1 264992 265660 D ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 264992..265660 Yersinia pseudotuberculosis IP 32953 2955652 YP_068769.1 CDS ftsX NC_006155.1 265650 266603 D ABC transporter, membrane protein; cell division protein FtsX 265650..266603 Yersinia pseudotuberculosis IP 32953 2955661 YP_068770.1 CDS rpoH NC_006155.1 266914 267771 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 266914..267771 Yersinia pseudotuberculosis IP 32953 2956525 YP_068771.1 CDS YPTB0225 NC_006155.1 267978 268370 R similar to Yersinia pestis YPO3809 yhhK; acetyltransferase (99.2% evalue=4.E-72); Salmonella typhi STY4247 yhhK; conserved hypothetical protein (45.3% evalue=2.E-24); acetyltransferase complement(267978..268370) Yersinia pseudotuberculosis IP 32953 2953129 YP_068772.1 CDS livK NC_006155.1 268792 269907 D similar to Yersinia pestis YPO3808 livK, livJ; branched-chain amino acid-binding protein (99.4% evalue=0); Escherichia coli Z4829 livK; high-affinity leucine-specific transport system; periplasmic binding protein (75.3% evalue=1.E-165); branched chain amino acid ABC transporter substrate-binding protein 268792..269907 Yersinia pseudotuberculosis IP 32953 2955954 YP_068773.1 CDS livH NC_006155.1 270088 271014 D LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 270088..271014 Yersinia pseudotuberculosis IP 32953 2955953 YP_068774.1 CDS livM NC_006155.1 271011 272297 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 271011..272297 Yersinia pseudotuberculosis IP 32953 2955955 YP_068775.1 CDS livG NC_006155.1 272294 273061 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 272294..273061 Yersinia pseudotuberculosis IP 32953 2955952 YP_068776.1 CDS livF NC_006155.1 273106 273807 D with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 273106..273807 Yersinia pseudotuberculosis IP 32953 2955951 YP_068777.1 CDS YPTB0231 NC_006155.1 274035 274496 D similar to Yersinia pestis YPO3803 hypothetical protein (86.2% evalue=7.E-72); hypothetical protein 274035..274496 Yersinia pseudotuberculosis IP 32953 2953130 YP_068778.1 CDS YPTB0232 NC_006155.1 274611 275717 R similar to Yersinia pestis YPO3802 exported protein (81.2% evalue=1.E-177); hypothetical protein complement(274611..275717) Yersinia pseudotuberculosis IP 32953 2953131 YP_068779.1 CDS YPTB0233 NC_006155.1 275942 276460 R similar to Yersinia pestis YPO3801 exported protein (99.4% evalue=3.E-96); hypothetical protein complement(275942..276460) Yersinia pseudotuberculosis IP 32953 2953132 YP_068780.1 CDS YPTB0234 NC_006155.1 276522 277169 R similar to Yersinia pestis YPO3800 exported protein (96.7% evalue=1.E-117); hypothetical protein complement(276522..277169) Yersinia pseudotuberculosis IP 32953 2953133 YP_068781.1 CDS YPTB0235 NC_006155.1 277141 277827 R similar to Yersinia pestis YPO3800 exported protein (35.5% evalue=3.E-22); hypothetical protein complement(277141..277827) Yersinia pseudotuberculosis IP 32953 2953134 YP_068782.1 CDS YPTB0236 NC_006155.1 277845 280178 R similar to Yersinia pestis YPO3798 exported protein (99.2% evalue=0); hypothetical protein complement(277845..280178) Yersinia pseudotuberculosis IP 32953 2953135 YP_068783.1 CDS YPTB0237 NC_006155.1 280445 280936 R similar to Yersinia pestis YPO3797 exported protein (100% evalue=5.E-85); hypothetical protein complement(280445..280936) Yersinia pseudotuberculosis IP 32953 2953136 YP_068784.1 CDS ugpB NC_006155.1 281491 282810 D with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 281491..282810 Yersinia pseudotuberculosis IP 32953 2956860 YP_068785.1 CDS ugpA NC_006155.1 283108 283992 D with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 283108..283992 Yersinia pseudotuberculosis IP 32953 2956859 YP_068786.1 CDS ugpE NC_006155.1 283992 284837 D with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 283992..284837 Yersinia pseudotuberculosis IP 32953 2956862 YP_068787.1 CDS ugpC NC_006155.1 284844 285917 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 284844..285917 Yersinia pseudotuberculosis IP 32953 2956861 YP_068788.1 CDS ugpQ NC_006155.1 285914 286663 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 285914..286663 Yersinia pseudotuberculosis IP 32953 2956863 YP_068789.1 CDS YPTB0243 NC_006155.1 286764 287720 D similar to Yersinia pestis YPO3791 membrane protein (99.6% evalue=1.E-165); Agrobacterium tumefaciens AGR_C_121 MdcF (27.6% evalue=1.E-34); malonate permease 286764..287720 Yersinia pseudotuberculosis IP 32953 2953137 YP_068790.1 CDS YPTB0244 NC_006155.1 287857 288525 D not present in pestis; hypothetical protein 287857..288525 Yersinia pseudotuberculosis IP 32953 2953138 YP_068791.1 CDS YPTB0245 NC_006155.1 288538 289740 D similar to Staphylococcus aureus_Mu50 SAV0141 hypothetical protein (25.8% evalue=1.E-26); Staphylococcus aureus_N315 SA0142 hypothetical protein, similar to DNA-binding protein (25.8% evalue=1.E-26); hypothetical protein 288538..289740 Yersinia pseudotuberculosis IP 32953 2953139 YP_068792.1 CDS MadN NC_006155.1 289947 290846 D similar to Yersinia pestis YPO3790 yigM; membrane protein (99.6% evalue=1.E-175); Escherichia coli JW3803 yigM; Hypothetical protein (73.7% evalue=1.E-129); acetate efflux pump, MadN 289947..290846 Yersinia pseudotuberculosis IP 32953 2955982 YP_068793.1 CDS metR NC_006155.1 290734 291687 R similar to Yersinia pestis YPO3789 metR; lysR-family transcriptional regulatory protein (99.6% evalue=0); Escherichia coli b3828 metR; transcriptional activator protein metR (88.5% evalue=1.E-159); LysR family transcriptional regulator complement(290734..291687) Yersinia pseudotuberculosis IP 32953 2956030 YP_068794.1 CDS metE NC_006155.1 291793 294069 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 291793..294069 Yersinia pseudotuberculosis IP 32953 2956023 YP_068795.1 CDS YPTB0249 NC_006155.1 294124 294927 R similar to Yersinia pestis YPO3787 carboxymethylenebutenolidase (99.6% evalue=1.E-159); Escherichia coli ECs4760 carboxymethylenebutenolidase (71.3% evalue=1.E-108); carboxymethylenebutenolidase complement(294124..294927) Yersinia pseudotuberculosis IP 32953 2953140 YP_068796.1 CDS udp NC_006155.1 295424 296185 D catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 295424..296185 Yersinia pseudotuberculosis IP 32953 2956858 YP_068797.1 CDS YPTB0251 NC_006155.1 296306 297166 D similar to Yersinia pestis YPO3785 conserved hypothetical protein (96.5% evalue=1.E-155); C. perfringens CPE1952 ptp; protein-tyrosine phosphatase (30% evalue=2.E-31); hypothetical protein 296306..297166 Yersinia pseudotuberculosis IP 32953 2953141 YP_068798.1 CDS YPTB0252 NC_006155.1 297507 299324 D similar to Yersinia pestis YPO3784 carbon starvation protein (100% evalue=0); Bacillus subtilis BG11924 cstA; carbon starvation protein (71% evalue=0); carbon starvation protein 297507..299324 Yersinia pseudotuberculosis IP 32953 2953142 YP_068799.1 CDS YPTB0253 NC_006155.1 299861 300391 D similar to Yersinia pestis YPO3783 membrane protein (97.7% evalue=1.E-100); Mesorhizobium loti mll0121 hypothetical protein (46.2% evalue=5.E-34); hypothetical protein 299861..300391 Yersinia pseudotuberculosis IP 32953 2953143 YP_068800.1 CDS rumC NC_006155.1 300599 302104 D similar to Yersinia pestis YPO3782 rumC; DNA recombination protein (99.7% evalue=0); Salmonella typhi STY3590 yigN; membrane protein (73.5% evalue=1.E-173); DNA recombination protein 300599..302104 Yersinia pseudotuberculosis IP 32953 2956561 YP_068801.1 CDS ubiE NC_006155.1 302196 302951 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 302196..302951 Yersinia pseudotuberculosis IP 32953 2956852 YP_068802.1 CDS YPTB0256 NC_006155.1 302983 303615 D similar to Yersinia pestis YPO3780 conserved hypothetical protein (100% evalue=1.E-113); Salmonella typhimurium STM3971 yigP; inner membrane protein (56.8% evalue=3.E-57); hypothetical protein 302983..303615 Yersinia pseudotuberculosis IP 32953 2953144 YP_068803.1 CDS ubiB NC_006155.1 303615 305246 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 303615..305246 Yersinia pseudotuberculosis IP 32953 2955151 YP_068804.1 CDS tatA NC_006155.1 305426 305692 D similar to Yersinia pestis YPO3778 tatA, mtta1; Sec-independent protein translocase TatA (100% evalue=6.E-44); Escherichia coli Z5358 tatA; twin arginine translocation protein; sec-independent protein export (64.1% evalue=7.E-21); Sec-independent protein translocase TatA 305426..305692 Yersinia pseudotuberculosis IP 32953 2956662 YP_068805.1 CDS tatB NC_006155.1 305696 306358 D similar to Yersinia pestis YPO3777 tatB, mtta2; Sec-independent protein translocase TatB (99% evalue=1.E-117); Salmonella typhimurium STM3974 tatB; component of Sec-independent protein secretion pathway (64.3% evalue=8.E-50); Sec-independent protein translocase TatB 305696..306358 Yersinia pseudotuberculosis IP 32953 2956663 YP_068806.1 CDS tatC NC_006155.1 306361 307137 D with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 306361..307137 Yersinia pseudotuberculosis IP 32953 2956664 YP_068807.1 CDS YPTB0261 NC_006155.1 307193 307975 D magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 307193..307975 Yersinia pseudotuberculosis IP 32953 2953145 YP_068808.1 CDS hemB NC_006155.1 307990 309012 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 307990..309012 Yersinia pseudotuberculosis IP 32953 2955774 YP_068809.1 CDS rfaH NC_006155.1 309122 309610 R similar to Yersinia pestis YPO3770 rfaH, hlyT, sfrB; regulatory protein (99.3% evalue=8.E-89); Escherichia coli b3842 rfaH, hlyT, sfrB; transcriptional activator rfaH (64.5% evalue=1.E-58); transcriptional activator RfaH complement(309122..309610) Yersinia pseudotuberculosis IP 32953 2956430 YP_068810.1 CDS YPTB0264 NC_006155.1 309858 311354 D catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 309858..311354 Yersinia pseudotuberculosis IP 32953 2953146 YP_068811.1 CDS fre NC_006155.1 311409 312110 D NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 311409..312110 Yersinia pseudotuberculosis IP 32953 2955526 YP_068812.1 CDS fadA NC_006155.1 312270 313433 R FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase complement(312270..313433) Yersinia pseudotuberculosis IP 32953 2955521 YP_068813.1 CDS fadB NC_006155.1 313445 315634 R includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha complement(313445..315634) Yersinia pseudotuberculosis IP 32953 2955522 YP_068814.1 CDS pepQ NC_006155.1 315961 317292 D catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 315961..317292 Yersinia pseudotuberculosis IP 32953 2956235 YP_068815.1 CDS YPTB0269 NC_006155.1 317292 317903 D similar to Escherichia coli ECs4776 hypothetical protein (64.8% evalue=4.E-71); Escherichia coli Z5370 yigZ; orf, hypothetical protein (64.8% evalue=4.E-71); hypothetical protein 317292..317903 Yersinia pseudotuberculosis IP 32953 2953147 YP_068816.1 CDS trkH NC_006155.1 317943 319394 D similar to Yersinia pestis YPO3762 trkH; Trk system potassium uptake protein TrkH (100% evalue=0); Escherichia coli ECs4777 potassium uptake protein (88.6% evalue=0); potassium transporter 317943..319394 Yersinia pseudotuberculosis IP 32953 2956733 YP_068817.1 CDS hemG NC_006155.1 319416 319949 D catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 319416..319949 Yersinia pseudotuberculosis IP 32953 2955779 YP_068818.1 CDS murB NC_006155.1 326089 327126 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 326089..327126 Yersinia pseudotuberculosis IP 32953 2956099 YP_068819.1 CDS birA NC_006155.1 327123 328082 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 327123..328082 Yersinia pseudotuberculosis IP 32953 2955293 YP_068820.1 CDS coaA NC_006155.1 328117 329067 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(328117..329067) Yersinia pseudotuberculosis IP 32953 2955344 YP_068821.1 CDS YPTB0275 NC_006155.1 329278 329829 R similar to Yersinia pestis YPO3757 acetyltransferase (99.4% evalue=1.E-100); Pseudomonas aeruginosa PA1885 conserved hypothetical protein (42.2% evalue=2.E-25); acetyltransferase complement(329278..329829) Yersinia pseudotuberculosis IP 32953 2953148 YP_068822.1 CDS tuf NC_006155.1 330818 332002 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 330818..332002 Yersinia pseudotuberculosis IP 32953 2956842 YP_068823.1 CDS secE NC_006155.1 332253 332636 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 332253..332636 Yersinia pseudotuberculosis IP 32953 2956583 YP_068824.1 CDS nusG NC_006155.1 332638 333183 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 332638..333183 Yersinia pseudotuberculosis IP 32953 2956183 YP_068825.1 CDS rplK NC_006155.1 333374 333802 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 333374..333802 Yersinia pseudotuberculosis IP 32953 2956495 YP_068826.1 CDS rplA NC_006155.1 333806 334510 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 333806..334510 Yersinia pseudotuberculosis IP 32953 2956487 YP_068827.1 CDS rplJ NC_006155.1 334875 335372 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 334875..335372 Yersinia pseudotuberculosis IP 32953 2956494 YP_068828.1 CDS rplL NC_006155.1 335439 335807 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 335439..335807 Yersinia pseudotuberculosis IP 32953 2956496 YP_068829.1 CDS rpoB NC_006155.1 336150 340178 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 336150..340178 Yersinia pseudotuberculosis IP 32953 2956521 YP_068830.1 CDS rpoC NC_006155.1 340307 344527 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 340307..344527 Yersinia pseudotuberculosis IP 32953 2956522 YP_068831.1 CDS thiH NC_006155.1 344833 345963 R in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH complement(344833..345963) Yersinia pseudotuberculosis IP 32953 2956693 YP_068832.1 CDS thiG NC_006155.1 345956 346771 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(345956..346771) Yersinia pseudotuberculosis IP 32953 2956692 YP_068833.1 CDS thiS NC_006155.1 346773 346988 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(346773..346988) Yersinia pseudotuberculosis IP 32953 2956699 YP_068834.1 CDS thiF NC_006155.1 346985 347782 R catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF complement(346985..347782) Yersinia pseudotuberculosis IP 32953 2956691 YP_068835.1 CDS thiE NC_006155.1 347772 348419 R catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase complement(347772..348419) Yersinia pseudotuberculosis IP 32953 2956690 YP_068836.1 CDS thiC NC_006155.1 348433 350478 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(348433..350478) Yersinia pseudotuberculosis IP 32953 2956688 YP_068837.1 CDS rsd NC_006155.1 350853 351362 R binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor complement(350853..351362) Yersinia pseudotuberculosis IP 32953 2956552 YP_068838.1 CDS nudC NC_006155.1 351459 352241 D can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 351459..352241 Yersinia pseudotuberculosis IP 32953 2953149 YP_068839.1 CDS YPTB0293 NC_006155.1 352334 353119 D similar to Yersinia pestis YPO3735 hypothetical protein (100% evalue=1.E-139); hypothetical protein 352334..353119 Yersinia pseudotuberculosis IP 32953 2953150 YP_068840.1 CDS hemE NC_006155.1 353238 354305 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 353238..354305 Yersinia pseudotuberculosis IP 32953 2955777 YP_068841.1 CDS nfi NC_006155.1 354371 355075 D Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 354371..355075 Yersinia pseudotuberculosis IP 32953 2956135 YP_068842.1 CDS YPTB0296 NC_006155.1 355121 355711 D similar to Yersinia pestis YPO3732 conserved hypothetical protein (99.4% evalue=1.E-109); Salmonella typhi STY3716 yjaG; conserved hypothetical protein (80.6% evalue=4.E-91); hypothetical protein 355121..355711 Yersinia pseudotuberculosis IP 32953 2953151 YP_068843.1 CDS hupA NC_006155.1 355900 356175 D histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 355900..356175 Yersinia pseudotuberculosis IP 32953 2955849 YP_068844.1 CDS yjaH NC_006155.1 356177 356878 D similar to Yersinia pestis YPO3730 yjaH; exported protein (99.5% evalue=1.E-121); Salmonella typhimurium STM4171 yjaH; inner membrane protein (42.5% evalue=5.E-43); hypothetical protein 356177..356878 Yersinia pseudotuberculosis IP 32953 2957080 YP_068845.1 CDS purD NC_006155.1 357064 358350 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(357064..358350) Yersinia pseudotuberculosis IP 32953 2956369 YP_068846.1 CDS purH NC_006155.1 358410 359999 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(358410..359999) Yersinia pseudotuberculosis IP 32953 2956372 YP_068847.1 CDS YPTB0301 NC_006155.1 366224 366490 D similar to Yersinia pestis YPCD1.93 transposase (100% evalue=2.E-44); Ralstonia solanacearum RS00015 tISRso12a, RSc2707; ISRSO12-transposase orfA protein (79.3% evalue=2.E-34); hypothetical protein 366224..366490 Yersinia pseudotuberculosis IP 32953 2953152 YP_068848.1 CDS YPTB0302 NC_006155.1 366568 367323 D similar to Yersinia pestis YPCD1.94 transposase (99.2% evalue=1.E-146); transposase 366568..367323 Yersinia pseudotuberculosis IP 32953 2953153 YP_068849.1 CDS YPTB0303 NC_006155.1 367716 368495 R similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein complement(367716..368495) Yersinia pseudotuberculosis IP 32953 2953154 YP_068850.1 CDS YPTB0304 NC_006155.1 368495 369517 R similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase complement(368495..369517) Yersinia pseudotuberculosis IP 32953 2953155 YP_068851.1 CDS ytaP NC_006155.1 369677 370834 D similar to Bacillus subtilis BG11786 ytaP; hypothetical protein (28.9% evalue=5.E-26); hypothetical protein 369677..370834 Yersinia pseudotuberculosis IP 32953 2957123 YP_068852.1 CDS actP NC_006155.1 370908 372563 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(370908..372563) Yersinia pseudotuberculosis IP 32953 2956247 YP_068853.1 CDS YPTB0307 NC_006155.1 372560 372871 R similar to Yersinia pestis YPO0252 membrane protein (100% evalue=3.E-53); Salmonella typhimurium STM4274 yjcH; inner membrane protein (66.6% evalue=2.E-35); hypothetical protein complement(372560..372871) Yersinia pseudotuberculosis IP 32953 2953156 YP_068854.1 CDS rcs NC_006155.1 372928 374886 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(372928..374886) Yersinia pseudotuberculosis IP 32953 2956405 YP_068855.1 CDS gltP NC_006155.1 375741 377057 D carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system; glutamate/aspartate:proton symporter 375741..377057 Yersinia pseudotuberculosis IP 32953 2955722 YP_068856.1 CDS YPTB0310 NC_006155.1 377235 377867 R similar to Yersinia pestis YPO0255 two-component response regulator (98% evalue=1.E-113); Salmonella typhimurium STM1391 ssrB; Secretion system regulator: transcriptonal activator, homologous with degU/uvrY/bvgA (54.6% evalue=3.E-57); two-component response regulator complement(377235..377867) Yersinia pseudotuberculosis IP 32953 2953157 YP_068857.1 CDS YPTB0311 NC_006155.1 377880 380699 R similar to Yersinia pestis YPO0256 two-component sensor/regulator (98.8% evalue=0); Salmonella typhi STY1728 ssrA, spiR; two-component sensor kinase (44.1% evalue=0); two-component sensor/regulator complement(377880..380699) Yersinia pseudotuberculosis IP 32953 2953158 YP_068858.1 CDS YPTB0312 NC_006155.1 380872 382443 D similar to Yersinia pestis YPO0257 possible type III secretion protein (99.8% evalue=0); Salmonella typhimurium STM1394 ssaC; Secretion system apparatus (51.5% evalue=1.E-138); type III secretion protein EscC/SpiA, outer membrane pore 380872..382443 Yersinia pseudotuberculosis IP 32953 2953159 YP_068859.1 CDS YPTB0313 NC_006155.1 382445 383659 D similar to Yersinia pestis YPO0258 type-III secretion protein (99.7% evalue=0); Salmonella typhi STY1725 ssaD; pathogenicity island protein (31% evalue=4.E-52); type-III secretion protein, EscD/SpiB 382445..383659 Yersinia pseudotuberculosis IP 32953 2953160 YP_068860.1 CDS YPTB0314 NC_006155.1 383678 383899 D similar to Yersinia pestis YP0259 type III secretion apparatus; hypothetical protein 383678..383899 Yersinia pseudotuberculosis IP 32953 2953161 YP_068861.1 CDS YPTB0315 NC_006155.1 383934 384713 D similar to Yersinia pestis YPO0260 AraC-family regulatory protein (99.5% evalue=1.E-115); AraC family transcriptional regulator 383934..384713 Yersinia pseudotuberculosis IP 32953 2953162 YP_068862.1 CDS YPTB0316 NC_006155.1 384723 384938 D similar to Yersinia pestis YPO0260a type III secretion apparatus (95.7% evalue=6.E-32); type III secretion apparatus 384723..384938 Yersinia pseudotuberculosis IP 32953 2953163 YP_068863.1 CDS YPTB0317 NC_006155.1 384935 385183 D similar to Yersinia pestis YPO0261 type III secretion apparatus (100% evalue=5.E-39); type III secretion apparatus 384935..385183 Yersinia pseudotuberculosis IP 32953 2953164 YP_068864.1 CDS YPTB0318 NC_006155.1 385281 385532 D similar to Yersinia pestis YPO0262 type III secretion apparatus (100% evalue=2.E-40); type III secretion apparatus 385281..385532 Yersinia pseudotuberculosis IP 32953 2953165 YP_068865.1 CDS YPTB0319 NC_006155.1 385529 386260 D similar to Yersinia pestis YPO0263 type III secretion system apparatus lipoprotein (99.5% evalue=1.E-133); Salmonella typhi STY1711 ssaJ; pathogenicity island lipoprotein (45.3% evalue=9.E-56); type III secretion system apparatus lipoprotein, EscJ/SsaJ 385529..386260 Yersinia pseudotuberculosis IP 32953 2953166 YP_068866.1 CDS YPTB0320 NC_006155.1 386455 387048 D similar to Yersinia pestis YPO0264 conserved hypothetical protein (100% evalue=1.E-110); Salmonella typhi STY1710 pathogenicity island protein (34.7% evalue=2.E-18); hypothetical protein 386455..387048 Yersinia pseudotuberculosis IP 32953 2953167 YP_068867.1 CDS YPTB0321 NC_006155.1 387045 387692 D similar to Yersinia pestis YPO0265 type III secretion system apparatus protein (97.2% evalue=1.E-114); Salmonella typhimurium STM1411 ssaK; Secretion system apparatus (27.4% evalue=2.E-14); type III secretion system apparatus protein 387045..387692 Yersinia pseudotuberculosis IP 32953 2953168 YP_068868.1 CDS YPTB0322 NC_006155.1 387685 389733 D with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system; secretion system apparatus protein SsaV 387685..389733 Yersinia pseudotuberculosis IP 32953 2953169 YP_068869.1 CDS YPTB0323 NC_006155.1 389720 391057 D similar to Yersinia pestis YPO0267 type III secretion system ATP synthase (100% evalue=0); Salmonella typhi STY1705 ssaN; type III secretion ATP synthase (59.4% evalue=1.E-133); type III secretion system ATPase 389720..391057 Yersinia pseudotuberculosis IP 32953 2953170 YP_068870.1 CDS YPTB0324 NC_006155.1 391054 391455 D similar to Yersinia pestis YPO0268 type III secretion system apparatus protein (99.2% evalue=1.E-70); M. musculus 108655 Foxp1, 4932443N09Rik; forkhead box P1 (28.6% evalue=1.E-08); type III secretion system apparatus protein 391054..391455 Yersinia pseudotuberculosis IP 32953 2953171 YP_068871.1 CDS YPTB0325 NC_006155.1 391619 391834 D similar to Yersinia pestis YPO0268a hypothetical protein (98.5% evalue=3.E-35); hypothetical protein 391619..391834 Yersinia pseudotuberculosis IP 32953 2953172 YP_068872.1 CDS YPTB0326 NC_006155.1 391854 392774 D similar to Yersinia pestis YPO0269 type III secretion system apparatus protein (98% evalue=1.E-176); Salmonella typhimurium STM1418 ssaQ; Secretion system apparatus (26.4% evalue=2.E-25); type III secretion system protein 391854..392774 Yersinia pseudotuberculosis IP 32953 2953173 YP_068873.2 CDS YPTB0327 NC_006155.1 392841 393551 D part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 392841..393551 Yersinia pseudotuberculosis IP 32953 2953174 YP_068874.1 CDS YPTB0328 NC_006155.1 393548 393841 D similar to Yersinia pestis YPO0271 type III secretion apparatus protein (100% evalue=4.E-48); Salmonella typhimurium STM1420 ssaS; Secretion system apparatus: homology with YscS of the secretion system of Yersinia (60.7% evalue=1.E-22); type III secretion apparatus protein EscS/SsaS/YscS 393548..393841 Yersinia pseudotuberculosis IP 32953 2953175 YP_068875.1 CDS YPTB0329 NC_006155.1 393843 394637 D similar to Yersinia pestis YPO0272 type III secretion apparatus protein (100% evalue=1.E-145); Salmonella typhi STY1699 ssaT; type III secretion protein (51.7% evalue=2.E-66); type III secretion apparatus protein EscT/SsaT/YscT 393843..394637 Yersinia pseudotuberculosis IP 32953 2953176 YP_068876.1 CDS YPTB0330 NC_006155.1 394627 395694 D member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli; secretion system apparatus protein SsaU 394627..395694 Yersinia pseudotuberculosis IP 32953 2953177 YP_068877.1 CDS YPTB0331 NC_006155.1 396077 397291 D similar to Yersinia pestis YPO0274 integral membrane protein (100% evalue=0); Escherichia coli b1929 yedE; hypothetical 44.4 kD protein in amyA-fliE intergenic region (ORF 48) (78.3% evalue=0); hypothetical protein 396077..397291 Yersinia pseudotuberculosis IP 32953 2953178 YP_068878.1 CDS YPTB0332 NC_006155.1 397288 397557 D similar to Yersinia pestis YPO0275 conserved hypothetical protein (98.8% evalue=3.E-47); Escherichia coli b1930 yedF; hypothetical 8.6 kD protein in amyA-fliE intergenic region (ORF 9) (93.2% evalue=3.E-36); hypothetical protein 397288..397557 Yersinia pseudotuberculosis IP 32953 2953179 YP_068879.1 CDS YPTB0333 NC_006155.1 397635 398621 R similar to Yersinia pestis YPO0276 LysR-family transcriptional regulator (100% evalue=0); Ralstonia solanacearum RS01682 probable transcription regulator protein (31% evalue=2.E-42); LysR family transcriptional regulator complement(397635..398621) Yersinia pseudotuberculosis IP 32953 2953180 YP_068880.1 CDS YPTB0334 NC_006155.1 398788 400074 D similar to Yersinia pestis YPO0277 transmembrane transport protein (100% evalue=0); Escherichia coli b3539 yhjV; hypothetical 47.3 kD protein in dctA-dppF intergenic region (O423) (62.6% evalue=1.E-157); HAAAP (hydroxy/aromatic amino acid permease) family protein 398788..400074 Yersinia pseudotuberculosis IP 32953 2953181 YP_068881.1 CDS metC NC_006155.1 400120 401301 D similar to Yersinia pestis YPO0278 metC; cystathionine beta-lyase (100% evalue=0); Saccharomyces cerevisiae YFR055W cystathionine beta-lyase (64.1% evalue=1.E-131); cystathionine beta-lyase 400120..401301 Yersinia pseudotuberculosis IP 32953 2956021 YP_068882.1 CDS hmuV NC_006155.1 401442 402242 R with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit complement(401442..402242) Yersinia pseudotuberculosis IP 32953 2955814 YP_068883.1 CDS hmuU NC_006155.1 402235 403239 R similar to Yersinia pestis YPO0280 hmuU; hemin transport system permease HmuU (100% evalue=0); Escherichia coli Z4918 chuU; permease of iron compound ABC transport system (66.5% evalue=1.E-115); hemin ABC transporter permease HmuU complement(402235..403239) Yersinia pseudotuberculosis IP 32953 2955813 YP_068884.1 CDS hmuT NC_006155.1 403236 404075 R similar to Yersinia pestis YPO0281 hmuT; hemin-binding periplasmic protein (99.2% evalue=1.E-150); Agrobacterium tumefaciens AGR_C_4467 hemin-binding periplasmic protein HmuT precursor (41.7% evalue=6.E-44); hemin-ABC transporter substrate-binding protein hmuT complement(403236..404075) Yersinia pseudotuberculosis IP 32953 2955812 YP_068885.1 CDS hmuS NC_006155.1 404072 405109 R similar to Yersinia pestis YPO0282 hmuS; hemin transport protein (100% evalue=0); Escherichia coli ECs4379 hypothetical protein (67% evalue=1.E-130); hemin degradation/transport protein hmuS complement(404072..405109) Yersinia pseudotuberculosis IP 32953 2955811 YP_068886.1 CDS hmuR NC_006155.1 405228 407258 R similar to Yersinia pestis YPO0283 hmuR; hemin receptor precursor (99.4% evalue=0); Escherichia coli ECs4380 heme utilization/transport protein (67.8% evalue=0); tonB dependent outer membrane hemin receptor, hmuR complement(405228..407258) Yersinia pseudotuberculosis IP 32953 2955810 YP_068887.1 CDS YPTB0341 NC_006155.1 407389 407580 R hemin uptake protein HEMP complement(407389..407580) Yersinia pseudotuberculosis IP 32953 2953182 YP_068888.1 CDS YPTB0342 NC_006155.1 407666 408316 R similar to Yersinia pestis YPO0284 conserved hypothetical protein (99.5% evalue=1.E-120); Escherichia coli ECs4385 ShuY-like protein (55.4% evalue=2.E-55); hypothetical protein complement(407666..408316) Yersinia pseudotuberculosis IP 32953 2953183 YP_068889.1 CDS YPTB0343 NC_006155.1 408350 408913 R similar to Yersinia pestis YPO0285 conserved hypothetical protein (98.3% evalue=5.E-99); Escherichia coli ECs4384 ShuX-like protein (59.3% evalue=1.E-53); hypothetical protein complement(408350..408913) Yersinia pseudotuberculosis IP 32953 2953184 YP_068890.1 CDS YPTB0344 NC_006155.1 408910 410223 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(408910..410223) Yersinia pseudotuberculosis IP 32953 2953185 YP_068891.1 CDS YPTB0345 NC_006155.1 410564 411364 R similar to Yersinia pestis YPO0287 methylenetetrahydrofolate reductase (99.6% evalue=1.E-153); Pseudomonas aeruginosa PA0430 metF; 5,10-methylenetetrahydrofolate reductase (25.2% evalue=1.E-21); methylenetetrahydrofolate reductase complement(410564..411364) Yersinia pseudotuberculosis IP 32953 2953186 YP_068892.1 CDS YPTB0346 NC_006155.1 411679 412167 R similar to Yersinia pestis YPO0288 exported protein (100% evalue=9.E-85); Escherichia coli Z1603 terW_2; unknown associated with tellurite resistance (51.6% evalue=7.E-34); hypothetical protein complement(411679..412167) Yersinia pseudotuberculosis IP 32953 2953187 YP_068893.1 CDS YPTB0347 NC_006155.1 412564 413523 R similar to Yersinia pestis YPO0289 ATP/GTP-binding protein (100% evalue=1.E-173); Escherichia coli Z1605 hypothetical protein (66.7% evalue=1.E-111); ATP/GTP-binding protein complement(412564..413523) Yersinia pseudotuberculosis IP 32953 2953188 YP_068894.1 CDS YPTB0348 NC_006155.1 413523 414602 R similar to Yersinia pestis YPO0290 conserved hypothetical protein (100% evalue=0); Escherichia coli Z1606 hypothetical protein (70.5% evalue=1.E-144); hypothetical protein complement(413523..414602) Yersinia pseudotuberculosis IP 32953 2953189 YP_068895.1 CDS YPTB0349 NC_006155.1 414595 415407 R similar to Yersinia pestis YPO0291 conserved hypothetical protein (100% evalue=1.E-160); Escherichia coli Z1607 hypothetical protein (65.4% evalue=1.E-102); hypothetical protein complement(414595..415407) Yersinia pseudotuberculosis IP 32953 2953190 YP_068896.1 CDS YPTB0350 NC_006155.1 415400 416536 R similar to Yersinia pestis YPO0292 conserved hypothetical protein (100% evalue=0); Escherichia coli Z1608 hypothetical protein (68.2% evalue=1.E-145); hypothetical protein complement(415400..416536) Yersinia pseudotuberculosis IP 32953 2953191 YP_068897.1 CDS YPTB0351 NC_006155.1 416548 417609 R similar to Yersinia pestis YPO0293 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs1350 hypothetical protein (55.1% evalue=1.E-106); hypothetical protein complement(416548..417609) Yersinia pseudotuberculosis IP 32953 2953192 YP_068898.1 CDS terZ NC_006155.1 417885 418478 D similar to Yersinia pestis YPO0294 terZ; tellurium resistance protein (99.4% evalue=1.E-109); Escherichia coli ECs1351 tellurium resistance protein TerZ (76.6% evalue=2.E-82); tellurium resistance protein 417885..418478 Yersinia pseudotuberculosis IP 32953 2956683 YP_068899.1 CDS terA NC_006155.1 418478 419662 D similar to Yersinia pestis YPO0295 terA; tellurite resistance protein (99.7% evalue=0); Escherichia coli Z1172 terA; phage inhibition, colicin resistance and tellurite resistance protein (69.2% evalue=1.E-155); tellurite resistance protein 418478..419662 Yersinia pseudotuberculosis IP 32953 2956676 YP_068900.1 CDS terB NC_006155.1 419695 420150 D similar to Yersinia pestis YPO0296 terB; tellurite resistance protein (100% evalue=2.E-80); Escherichia coli ECs1353 tellurium resistance protein TerB (71.5% evalue=6.E-57); tellurite resistance protein 419695..420150 Yersinia pseudotuberculosis IP 32953 2956677 YP_068901.1 CDS terC NC_006155.1 420172 421209 D similar to Yersinia pestis YPO0297 terC; tellurium resistance protein (99.4% evalue=0); Escherichia coli Z1613 terC_2; phage inhibition, colicin resistance and tellurite resistance protein (83.9% evalue=1.E-164); tellurite resistance protein 420172..421209 Yersinia pseudotuberculosis IP 32953 2956678 YP_068902.1 CDS terD NC_006155.1 421273 421851 D similar to Yersinia pestis YPO0298 terD; tellurium resistance protein (100% evalue=1.E-106); Escherichia coli Z1614 terD_2; phage inhibition, colicin resistance and tellurite resistance protein (86.4% evalue=5.E-94); tellurium resistance protein 421273..421851 Yersinia pseudotuberculosis IP 32953 2956679 YP_068903.1 CDS terE NC_006155.1 422035 422610 D similar to Yersinia pestis YPO0299 terE; tellurium resistance protein (100% evalue=1.E-105); Escherichia coli Z1615 terE_2; phage inhibition, colicin resistance and tellurite resistance protein (85.3% evalue=4.E-91); tellurium resistance protein 422035..422610 Yersinia pseudotuberculosis IP 32953 2956680 YP_068904.1 CDS YPTB0358 NC_006155.1 423323 423961 D similar to Yersinia pestis YPO0301 exported protein (100% evalue=1.E-115); Salmonella typhimurium STM4574 outer membrane protein (23.8% evalue=8.E-09); hypothetical protein 423323..423961 Yersinia pseudotuberculosis IP 32953 2953193 YP_068905.1 CDS YPTB0359 NC_006155.1 424212 426590 D similar to Yersinia pestis YPO0302 outer membrane fimbrial usher protein (99.6% evalue=0); Escherichia coli b3216 yhcD; hypothetical outer membrane usher protein in gltF-nanT intergenic region precursor (27.2% evalue=8.E-80); outer membrane fimbrial usher protein 424212..426590 Yersinia pseudotuberculosis IP 32953 2953194 YP_068906.1 CDS YPTB0360 NC_006155.1 426662 427405 D member of the periplasmic pilus chaperone family of proteins; periplasmic chaperone protein 426662..427405 Yersinia pseudotuberculosis IP 32953 2953195 YP_068907.1 CDS YPTB0362 NC_006155.1 428763 430181 D similar to Yersinia pestis YPO0306 hypothetical protein (99.7% evalue=0); hypothetical protein 428763..430181 Yersinia pseudotuberculosis IP 32953 2953197 YP_068908.1 CDS YPTB0363 NC_006155.1 430201 430476 R similar to Salmonella typhimurium STM4155 inner membrane protein (32.5% evalue=2.E-07); hypothetical protein complement(430201..430476) Yersinia pseudotuberculosis IP 32953 2953198 YP_068909.1 CDS YPTB0364 NC_006155.1 431190 433247 D similar to Yersinia pestis YPO0308 oxidoreductase (99.7% evalue=0); Ralstonia solanacearum RS01873 conserved hypothetical protein (42.8% evalue=1.E-102); oxidoreductase 431190..433247 Yersinia pseudotuberculosis IP 32953 2953199 YP_068910.1 CDS YPTB0365 NC_006155.1 433591 437385 R similar to Yersinia pestis YPO1672 conserved hypothetical protein (79.7% evalue=0); autotransporter protein complement(433591..437385) Yersinia pseudotuberculosis IP 32953 2953200 YP_068911.1 CDS ubiC NC_006155.1 438217 438741 D catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 438217..438741 Yersinia pseudotuberculosis IP 32953 2956851 YP_068912.1 CDS ubiA NC_006155.1 438907 439773 D catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 438907..439773 Yersinia pseudotuberculosis IP 32953 2956850 YP_068913.1 CDS pslB NC_006155.1 439954 442458 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(439954..442458) Yersinia pseudotuberculosis IP 32953 2956340 YP_068914.1 CDS dgkA NC_006155.1 442586 442957 D similar to Yersinia pestis YPO0313 dgkA; diacylglycerol kinase (100% evalue=9.E-63); Escherichia coli ECs5025 diacylglycerol kinase (68.3% evalue=1.E-42); diacylglycerol kinase 442586..442957 Yersinia pseudotuberculosis IP 32953 2955456 YP_068915.1 CDS lexA NC_006155.1 443082 443690 D Represses a number of genes involved in the response to DNA damage; LexA repressor 443082..443690 Yersinia pseudotuberculosis IP 32953 2955945 YP_068916.1 CDS YPTB0371 NC_006155.1 443899 444408 R Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor complement(443899..444408) Yersinia pseudotuberculosis IP 32953 2953201 YP_068917.1 CDS YPTB0372 NC_006155.1 444663 445700 D similar to Yersinia pestis YPO0316 conserved hypothetical protein (99.7% evalue=0); Salmonella typhi STY4439 yjbN; conserved hypothetical protein (77.7% evalue=1.E-149); tRNA-dihydrouridine synthase A 444663..445700 Yersinia pseudotuberculosis IP 32953 2953202 YP_068918.1 CDS pspG NC_006155.1 446216 446434 D coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 446216..446434 Yersinia pseudotuberculosis IP 32953 2953203 YP_068919.1 CDS qor NC_006155.1 446779 447762 R similar to Yersinia pestis YPO0319 qor, hcz; quinone oxidoreductase (99.6% evalue=0); Salmonella typhi STY4441 qor; quinone oxidoreductase (73.7% evalue=1.E-136); quinone oxidoreductase complement(446779..447762) Yersinia pseudotuberculosis IP 32953 2956395 YP_068920.1 CDS dnaB NC_006155.1 448094 449500 D unwinds double stranded DNA; replicative DNA helicase 448094..449500 Yersinia pseudotuberculosis IP 32953 2955471 YP_068921.1 CDS alr NC_006155.1 449597 450676 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 449597..450676 Yersinia pseudotuberculosis IP 32953 2955187 YP_068922.1 CDS tyrB NC_006155.1 450862 452055 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 450862..452055 Yersinia pseudotuberculosis IP 32953 2956846 YP_068923.1 CDS YPTB0378 NC_006155.1 452582 452941 D similar to Yersinia pestis YPO0323 conserved hypothetical protein (100% evalue=3.E-66); Escherichia coli JW4018 yjbR; Hypothetical protein (57.5% evalue=5.E-35); hypothetical protein 452582..452941 Yersinia pseudotuberculosis IP 32953 2953204 YP_068924.1 CDS uvrA NC_006155.1 453034 455877 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(453034..455877) Yersinia pseudotuberculosis IP 32953 2956881 YP_068925.1 CDS ssb NC_006155.1 456318 456866 D binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 456318..456866 Yersinia pseudotuberculosis IP 32953 2956634 YP_068926.1 CDS YPTB0381 NC_006155.1 457114 457428 R similar to Yersinia pestis YPO0326 conserved hypothetical protein (100% evalue=3.E-58); Salmonella typhimurium STM4043 yiiL; cytoplasmic protein (77.8% evalue=1.E-45); hypothetical protein complement(457114..457428) Yersinia pseudotuberculosis IP 32953 2953205 YP_068927.1 CDS YPTB0382 NC_006155.1 457442 458590 R similar to Yersinia pestis YPO0327 probable alcohol dehydrogenase (99.4% evalue=0); Salmonella typhi STY3830 alcohol dehydrogenase (79.8% evalue=1.E-175); alcohol dehydrogenase complement(457442..458590) Yersinia pseudotuberculosis IP 32953 2953206 YP_068928.1 CDS rhaD NC_006155.1 458657 459481 R similar to Yersinia pestis YPO0328 rhaD; rhamnulose-1-phosphate aldolase (99.6% evalue=1.E-158); Escherichia coli b3902 rhaD; rhamnulose-1-phosphate aldolase (68% evalue=1.E-109); rhamnulose-1-phosphate aldolase complement(458657..459481) Yersinia pseudotuberculosis IP 32953 2956440 YP_068929.1 CDS rhaA NC_006155.1 459494 460750 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(459494..460750) Yersinia pseudotuberculosis IP 32953 2956438 YP_068930.1 CDS rhaB NC_006155.1 460747 462204 R catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase complement(460747..462204) Yersinia pseudotuberculosis IP 32953 2956439 YP_068931.1 CDS rhaS NC_006155.1 462601 463422 D activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 462601..463422 Yersinia pseudotuberculosis IP 32953 2956442 YP_068932.1 CDS rhaR NC_006155.1 463555 464427 D activates the expression of rhaRS in response to L-rhamnose; transcriptional activator RhaR 463555..464427 Yersinia pseudotuberculosis IP 32953 2956441 YP_068933.1 CDS rhaT NC_006155.1 464576 465610 R transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter complement(464576..465610) Yersinia pseudotuberculosis IP 32953 2956443 YP_068934.1 CDS YPTB0389 NC_006155.1 465764 466054 D similar to Yersinia pestis YPO0335 hypothetical protein (91.6% evalue=6.E-41); hypothetical protein 465764..466054 Yersinia pseudotuberculosis IP 32953 2953207 YP_068935.1 CDS YPTB0391 NC_006155.1 466490 466915 R similar to Yersinia pestis YPO0337 exported protein (100% evalue=9.E-81); Salmonella typhi STY1891 pertussis-like toxin subunit (46% evalue=2.E-27); hypothetical protein complement(466490..466915) Yersinia pseudotuberculosis IP 32953 2953209 YP_068936.1 CDS YPTB0392 NC_006155.1 467145 467312 D similar to Yersinia pestis YPO0338 hypothetical protein. 98% identical; hypothetical protein 467145..467312 Yersinia pseudotuberculosis IP 32953 2953210 YP_068937.1 CDS YPTB0393 NC_006155.1 467327 469897 D similar to Yersinia pestis YPO3828 hypothetical protein (30% evalue=6.E-15); enhancing factor 467327..469897 Yersinia pseudotuberculosis IP 32953 2953211 YP_068938.1 CDS YPTB0395 NC_006155.1 470551 471126 R similar to Yersinia pestis YPO0341 TetR-family regulatory protein (99.4% evalue=1.E-105); Escherichia coli ECs5116 hypothetical protein (64.9% evalue=2.E-67); transcriptional regulator complement(470551..471126) Yersinia pseudotuberculosis IP 32953 2953213 YP_068939.1 CDS YPTB0396 NC_006155.1 471546 473561 D unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit 471546..473561 Yersinia pseudotuberculosis IP 32953 2953214 YP_068940.1 CDS hydN NC_006155.1 473584 474141 D similar to Yersinia pestis YPO0343 hydN; 4Fe-4S ferrodoxin (100% evalue=1.E-107); Salmonella typhimurium STM2843 hydN; electron transport protein (FeS senter) from formate to hydrogen (50.7% evalue=8.E-51); 4Fe-4S ferredoxin 473584..474141 Yersinia pseudotuberculosis IP 32953 2955858 YP_068941.1 CDS fdhF NC_006155.1 474164 476311 D similar to Yersinia pestis YPO0344 fdhF; formate dehydrogenase H (99.4% evalue=0); Escherichia coli b4079 fdhF; formate dehydrogenase , formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide (formate dehydrogenase-H alpha subunit) (62.9% evalue=0); formate dehydrogenase H 474164..476311 Yersinia pseudotuberculosis IP 32953 2955536 YP_068942.1 CDS dipZ NC_006155.1 476373 478160 R two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein complement(476373..478160) Yersinia pseudotuberculosis IP 32953 2955489 YP_068943.1 CDS YPTB0400 NC_006155.1 478136 478495 R copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA complement(478136..478495) Yersinia pseudotuberculosis IP 32953 2953215 YP_068944.1 CDS dcuA NC_006155.1 478680 479981 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter complement(478680..479981) Yersinia pseudotuberculosis IP 32953 2955435 YP_068945.1 CDS aspA NC_006155.1 480101 481537 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(480101..481537) Yersinia pseudotuberculosis IP 32953 2955247 YP_068946.1 CDS fxsA NC_006155.1 481985 482563 D F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 481985..482563 Yersinia pseudotuberculosis IP 32953 2953216 YP_068947.1 CDS groES NC_006155.1 482818 483111 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 482818..483111 Yersinia pseudotuberculosis IP 32953 2955746 YP_068948.1 CDS groEL NC_006155.1 483158 484804 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 483158..484804 Yersinia pseudotuberculosis IP 32953 2955745 YP_068949.1 CDS YPTB0406 NC_006155.1 485440 485826 D similar to Yersinia pestis YPO0352 lipoprotein (99.2% evalue=2.E-66); Escherichia coli ECs5125 hypothetical protein (61.9% evalue=3.E-38); lipoprotein 485440..485826 Yersinia pseudotuberculosis IP 32953 2953217 YP_068950.1 CDS YPTB0407 NC_006155.1 486111 487139 R similar to Yersinia pestis YPO0353 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM4333 yjeK; aminomutase (73.3% evalue=1.E-145); hypothetical protein complement(486111..487139) Yersinia pseudotuberculosis IP 32953 2953218 YP_068951.1 CDS efp NC_006155.1 487175 487741 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 487175..487741 Yersinia pseudotuberculosis IP 32953 2955497 YP_068952.1 CDS sugE NC_006155.1 487988 488302 D member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; quaternary ammonium compound-resistance protein SugE 487988..488302 Yersinia pseudotuberculosis IP 32953 2956650 YP_068953.1 CDS frdD NC_006155.1 488467 488823 R in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D complement(488467..488823) Yersinia pseudotuberculosis IP 32953 2955641 YP_068954.1 CDS frdC NC_006155.1 488840 489232 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C complement(488840..489232) Yersinia pseudotuberculosis IP 32953 2955640 YP_068955.1 CDS frdB NC_006155.1 489249 489983 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit complement(489249..489983) Yersinia pseudotuberculosis IP 32953 2955639 YP_068956.1 CDS frdA NC_006155.1 489976 491799 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit complement(489976..491799) Yersinia pseudotuberculosis IP 32953 2955638 YP_068957.1 CDS poxA NC_006155.1 492257 493234 D lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 492257..493234 Yersinia pseudotuberculosis IP 32953 2956301 YP_068958.1 CDS BspA NC_006155.1 493479 496838 R similar to Yersinia pestis YPO0363 membrane transport protein (99.5% evalue=0); Salmonella typhimurium STM4347 yjeP; periplasmic binding protein (70.1% evalue=0); hypothetical protein complement(493479..496838) Yersinia pseudotuberculosis IP 32953 2955297 YP_068959.1 CDS psd NC_006155.1 496862 497743 R catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase complement(496862..497743) Yersinia pseudotuberculosis IP 32953 2956338 YP_068960.1 CDS YPTB0417 NC_006155.1 498068 499120 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(498068..499120) Yersinia pseudotuberculosis IP 32953 2953219 YP_068961.1 CDS YPTB0418 NC_006155.1 499320 499865 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 499320..499865 Yersinia pseudotuberculosis IP 32953 2953220 YP_068962.1 CDS YPTB0419 NC_006155.1 501121 502356 R similar to Yersinia pestis YPO0367 iron-sulfur cluster-binding protein (100% evalue=0); Escherichia coli Z5773 yjeS; orf, hypothetical protein (74.6% evalue=0); (Fe-S)-binding protein complement(501121..502356) Yersinia pseudotuberculosis IP 32953 2953221 YP_068963.1 CDS YPTB0420 NC_006155.1 502355 503869 D similar to Yersinia pestis YPO0368 conserved hypothetical protein (99.8% evalue=0); Escherichia coli b4167 yjeF; hypothetical 54.7 kD protein in PSD-amiB intergenic region (URF1) (60.7% evalue=0); hypothetical protein 502355..503869 Yersinia pseudotuberculosis IP 32953 2953222 YP_068964.1 CDS YPTB0421 NC_006155.1 503880 504350 D possibly involved in cell wall synthesis; ATPase 503880..504350 Yersinia pseudotuberculosis IP 32953 2953223 YP_068965.1 CDS YPTB0422 NC_006155.1 504490 506271 D similar to Yersinia pestis YPO0370 N-acetylmuramoyl-L-alanine amidase-family protein (99.4% evalue=0); Escherichia coli ECs5145 N-acetylmuramoyl-l-alanine amidase II (62.8% evalue=1.E-145); N-acetylmuramoyl-L-alanine amidase 504490..506271 Yersinia pseudotuberculosis IP 32953 2953224 YP_068966.1 CDS mutL NC_006155.1 506287 508194 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 506287..508194 Yersinia pseudotuberculosis IP 32953 2956107 YP_068967.1 CDS miaA NC_006155.1 508187 509128 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 508187..509128 Yersinia pseudotuberculosis IP 32953 2956041 YP_068968.1 CDS hfq NC_006155.1 509245 509550 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 509245..509550 Yersinia pseudotuberculosis IP 32953 2957096 YP_068969.1 CDS hflX NC_006155.1 509649 510935 D involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 509649..510935 Yersinia pseudotuberculosis IP 32953 2955788 YP_068970.1 CDS hflK NC_006155.1 511176 512438 D with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 511176..512438 Yersinia pseudotuberculosis IP 32953 2955787 YP_068971.1 CDS hflC NC_006155.1 512442 513446 D with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 512442..513446 Yersinia pseudotuberculosis IP 32953 2955786 YP_068972.1 CDS YPTB0429 NC_006155.1 513618 513818 D similar to Yersinia pestis YPO0377 membrane protein (100% evalue=6.E-32); Escherichia coli JW4134 yjeT; Hypothetical protein (81.5% evalue=8.E-24); hypothetical protein 513618..513818 Yersinia pseudotuberculosis IP 32953 2953225 YP_068973.1 CDS purA NC_006155.1 513918 515216 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 513918..515216 Yersinia pseudotuberculosis IP 32953 2956366 YP_068974.1 CDS YPTB0431 NC_006155.1 515605 516030 D negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 515605..516030 Yersinia pseudotuberculosis IP 32953 2953226 YP_068975.1 CDS rnr NC_006155.1 516271 518805 D 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 516271..518805 Yersinia pseudotuberculosis IP 32953 2956475 YP_068976.1 CDS YPTB0433 NC_006155.1 518924 519664 D Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 518924..519664 Yersinia pseudotuberculosis IP 32953 2953227 YP_068977.1 CDS aidB NC_006155.1 520072 521715 D catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; isovaleryl CoA dehydrogenase 520072..521715 Yersinia pseudotuberculosis IP 32953 2955180 YP_068978.1 CDS YPTB0435 NC_006155.1 521825 522136 R in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; biofilm stress and motility protein A complement(521825..522136) Yersinia pseudotuberculosis IP 32953 2953228 YP_068979.1 CDS rjfP NC_006155.1 522327 523076 D YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 522327..523076 Yersinia pseudotuberculosis IP 32953 2956459 YP_068980.1 CDS YPTB0437 NC_006155.1 523151 523429 D similar to Yersinia pestis YPO3540 hypothetical protein. 98% identical.; hypothetical protein 523151..523429 Yersinia pseudotuberculosis IP 32953 2953229 YP_068981.1 CDS rpsF NC_006155.1 523443 523835 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 523443..523835 Yersinia pseudotuberculosis IP 32953 2956535 YP_068982.1 CDS priB NC_006155.1 523841 524161 D binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 523841..524161 Yersinia pseudotuberculosis IP 32953 2956319 YP_068983.1 CDS rpsR NC_006155.1 524166 524393 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 524166..524393 Yersinia pseudotuberculosis IP 32953 2956545 YP_068984.1 CDS rplI NC_006155.1 524433 524885 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 524433..524885 Yersinia pseudotuberculosis IP 32953 2956493 YP_068985.1 CDS YPTB0442 NC_006155.1 524951 525406 R similar to Yersinia pestis YPO3534 exported protein (100% evalue=4.E-86); hypothetical protein complement(524951..525406) Yersinia pseudotuberculosis IP 32953 2953230 YP_068986.1 CDS YPTB0443 NC_006155.1 525546 526286 R similar to Yersinia pestis YPO3533 conserved hypothetical protein (100% evalue=1.E-141); Salmonella typhimurium STM4396 ytfB; cell envelope opacity-associated protein A (45.1% evalue=2.E-36); hypothetical protein complement(525546..526286) Yersinia pseudotuberculosis IP 32953 2953231 YP_068987.1 CDS fklB NC_006155.1 526650 527270 D FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 526650..527270 Yersinia pseudotuberculosis IP 32953 2955551 YP_068988.1 CDS YPTB0445 NC_006155.1 527368 528033 R Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein complement(527368..528033) Yersinia pseudotuberculosis IP 32953 2953232 YP_068989.1 CDS cpdB NC_006155.1 528162 530132 R periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein complement(528162..530132) Yersinia pseudotuberculosis IP 32953 2955352 YP_068990.1 CDS cysQ NC_006155.1 530581 531324 D catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 530581..531324 Yersinia pseudotuberculosis IP 32953 2955413 YP_068991.1 CDS YPTB0448 NC_006155.1 531327 531890 R similar to Yersinia pestis YPO3528 exported protein (100% evalue=1.E-102); Salmonella typhi STY4763 ytfJ; exported protein (60.9% evalue=4.E-62); hypothetical protein complement(531327..531890) Yersinia pseudotuberculosis IP 32953 2953233 YP_068992.1 CDS YPTB0449 NC_006155.1 532226 532438 D similar to Yersinia pestis YPO3527 conserved hypothetical protein (100% evalue=5.E-34); Escherichia coli JW4176 ytfK; Hypothetical protein (77.2% evalue=3.E-24); hypothetical protein 532226..532438 Yersinia pseudotuberculosis IP 32953 2953234 YP_068993.1 CDS YPTB0450 NC_006155.1 532546 533877 R similar to Yersinia pestis YPO3526 membrane protein (100% evalue=0); Salmonella typhi STY4766 ytfL; membrane protein (81.3% evalue=0); CorC/HlyC family transporters complement(532546..533877) Yersinia pseudotuberculosis IP 32953 2953235 YP_068994.1 CDS msrA NC_006155.1 534155 534793 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(534155..534793) Yersinia pseudotuberculosis IP 32953 2956087 YP_068995.1 CDS YPTB0452 NC_006155.1 535068 536804 D similar to Yersinia pestis YPO3524 exported protein (99.6% evalue=0); Salmonella typhimurium STM4409 ytfM; outer membrane protein (71.1% evalue=0); hypothetical protein 535068..536804 Yersinia pseudotuberculosis IP 32953 2953236 YP_068996.1 CDS YPTB0453 NC_006155.1 536801 540739 D similar to Yersinia pestis YPO3523 exported protein (99.1% evalue=0); Salmonella typhi STY4769 ytfN; exported protein (56.8% evalue=0); hypothetical protein 536801..540739 Yersinia pseudotuberculosis IP 32953 2953237 YP_068997.1 CDS YPTB0454 NC_006155.1 540742 541098 D similar to Yersinia pestis YPO3522 conserved hypothetical protein (100% evalue=9.E-68); Escherichia coli JW4181 ytfP; Hypothetical protein (61.2% evalue=9.E-39); hypothetical protein 540742..541098 Yersinia pseudotuberculosis IP 32953 2953238 YP_068998.1 CDS ppa NC_006155.1 541216 541743 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(541216..541743) Yersinia pseudotuberculosis IP 32953 2956303 YP_068999.1 CDS fbp NC_006155.1 541943 542956 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(541943..542956) Yersinia pseudotuberculosis IP 32953 2955531 YP_069000.1 CDS mpl NC_006155.1 543127 544512 D similar to Yersinia pestis YPO3519 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (100% evalue=0); Escherichia coli Z5843 yjfG; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (84.4% evalue=0); UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopimelate ligase 543127..544512 Yersinia pseudotuberculosis IP 32953 2956072 YP_069001.1 CDS YPTB0458 NC_006155.1 544808 545071 R similar to Yersinia pestis YPO3518 exported protein (100% evalue=7.E-43); Escherichia coli b3238 yhcN; hypothetical 11.2 kD protein in argR-cafA intergenic region (54% evalue=3.E-21); hypothetical protein complement(544808..545071) Yersinia pseudotuberculosis IP 32953 2953239 YP_069002.1 CDS argR NC_006155.1 545460 545930 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor ArgR complement(545460..545930) Yersinia pseudotuberculosis IP 32953 2955219 YP_069003.1 CDS mdh NC_006155.1 546394 547332 D oxidizes malate to oxaloacetate; malate dehydrogenase 546394..547332 Yersinia pseudotuberculosis IP 32953 2956006 YP_069004.1 CDS sfsB NC_006155.1 547766 548041 R similar to Yersinia pestis YPO2785 sfsB, nlp, sfs7; DNA-binding protein (73.9% evalue=2.E-26); Salmonella typhimurium STM2749 cytoplasmic protein (65% evalue=3.E-26); DNA-binding protein complement(547766..548041) Yersinia pseudotuberculosis IP 32953 2956601 YP_069005.1 CDS YPTB0462 NC_006155.1 548171 548572 D similar to Yersinia pestis YPO3514 conserved hypothetical protein (100% evalue=2.E-61); Salmonella typhimurium STM2373 cytoplasmic protein (33.6% evalue=6.E-08); hypothetical protein 548171..548572 Yersinia pseudotuberculosis IP 32953 2953240 YP_069006.1 CDS ispB NC_006155.1 548669 549640 R similar to Yersinia pestis YPO3513 ispB, cel; octaprenyl-diphosphate synthase (99.6% evalue=1.E-179); Salmonella typhimurium STM3305 ispB; octaprenyl diphosphate synthase (80.6% evalue=1.E-142); octaprenyl diphosphate synthase complement(548669..549640) Yersinia pseudotuberculosis IP 32953 2955899 YP_069007.1 CDS rplU NC_006155.1 549900 550211 D similar to Yersinia pestis YPO3512 rplU; 50S ribosomal protein L21 (100% evalue=5.E-54); Salmonella typhimurium STM3304 rplU; 50S ribosomal subunit protein L21 (89.3% evalue=9.E-50); 50S ribosomal protein L21 549900..550211 Yersinia pseudotuberculosis IP 32953 2956505 YP_069008.1 CDS rpmA NC_006155.1 550231 550488 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 550231..550488 Yersinia pseudotuberculosis IP 32953 2956510 YP_069009.1 CDS YPTB0466 NC_006155.1 550576 551562 D similar to Yersinia pestis YPO3510 membrane protein (100% evalue=0); Salmonella typhi STY3481 membrane protein (80.5% evalue=1.E-135); DMT family amino acid efflux protein 550576..551562 Yersinia pseudotuberculosis IP 32953 2953241 YP_069010.1 CDS obgE NC_006155.1 551563 552735 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 551563..552735 Yersinia pseudotuberculosis IP 32953 2953242 YP_069011.1 CDS basS NC_006155.1 552830 553897 R similar to Yersinia pestis YPO3508 basS, pmrB; two-component system sensor protein (99.7% evalue=0); Salmonella typhimurium STM4291 basS; sensory kinase in two-component regulatory system with BasR (50.7% evalue=6.E-92); sensor protein BasS/PmrB complement(552830..553897) Yersinia pseudotuberculosis IP 32953 2955273 YP_069012.1 CDS basR NC_006155.1 553894 554556 R response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR complement(553894..554556) Yersinia pseudotuberculosis IP 32953 2955272 YP_069013.1 CDS dacB NC_006155.1 554562 556010 R penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase complement(554562..556010) Yersinia pseudotuberculosis IP 32953 2955420 YP_069014.1 CDS greA NC_006155.1 556268 556744 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 556268..556744 Yersinia pseudotuberculosis IP 32953 2955743 YP_069015.1 CDS YPTB0472 NC_006155.1 556872 557165 R similar to Yersinia pestis YPO3504 conserved hypothetical protein (100% evalue=2.E-48); Salmonella typhimurium STM3298 yhbY; RNA-binding protein containing KH domain (83.5% evalue=7.E-40); hypothetical protein complement(556872..557165) Yersinia pseudotuberculosis IP 32953 2953243 YP_069016.1 CDS rrmJ NC_006155.1 557312 557941 D Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase 557312..557941 Yersinia pseudotuberculosis IP 32953 2955655 YP_069017.1 CDS hflB NC_006155.1 557998 559932 D inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 557998..559932 Yersinia pseudotuberculosis IP 32953 2955653 YP_069018.1 CDS folP NC_006155.1 560052 560885 D catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 560052..560885 Yersinia pseudotuberculosis IP 32953 2955636 YP_069019.1 CDS glmM NC_006155.1 560895 562235 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 560895..562235 Yersinia pseudotuberculosis IP 32953 2956082 YP_069020.1 CDS secG NC_006155.1 562458 562793 D similar to Yersinia pestis YPO3499 secG; protein-export membrane protein (100% evalue=1.E-56); Salmonella typhi STY3471 secG; protein-export membrane protein (78.3% evalue=7.E-44); preprotein translocase subunit SecG 562458..562793 Yersinia pseudotuberculosis IP 32953 2956586 YP_069021.2 CDS YPTB0478 NC_006155.1 563325 563777 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 563325..563777 Yersinia pseudotuberculosis IP 32953 2953244 YP_069022.1 CDS nusA NC_006155.1 563799 565286 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 563799..565286 Yersinia pseudotuberculosis IP 32953 2956181 YP_069023.1 CDS infB NC_006155.1 565311 567989 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 565311..567989 Yersinia pseudotuberculosis IP 32953 2955885 YP_069024.1 CDS rbfA NC_006155.1 568055 568465 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 568055..568465 Yersinia pseudotuberculosis IP 32953 2956402 YP_069025.1 CDS truB NC_006155.1 568465 569439 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 568465..569439 Yersinia pseudotuberculosis IP 32953 2956835 YP_069026.1 CDS rpsO NC_006155.1 569561 569830 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 569561..569830 Yersinia pseudotuberculosis IP 32953 2956557 YP_069027.1 CDS pnp NC_006155.1 570094 572208 D similar to Yersinia pestis YPO3490 pnp; polyribonucleotide nucleotidyltransferase (99.8% evalue=0); Escherichia coli Z4525 pnp; polynucleotide phosphorylase; cytidylate kinase activity (87.4% evalue=0); polynucleotide phosphorylase 570094..572208 Yersinia pseudotuberculosis IP 32953 2956290 YP_069028.1 CDS nlpI NC_006155.1 572333 573217 D lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 572333..573217 Yersinia pseudotuberculosis IP 32953 2956147 YP_069029.1 CDS deaD NC_006155.1 573404 575398 D participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 573404..575398 Yersinia pseudotuberculosis IP 32953 2955443 YP_069030.1 CDS YPTB0487 NC_006155.1 575418 575591 D similar to Yersinia pestis YPO3487 hypothetical protein. 100% identical; hypothetical protein 575418..575591 Yersinia pseudotuberculosis IP 32953 2953245 YP_069031.1 CDS YPTB0488 NC_006155.1 575634 576002 D similar to Yersinia pestis YPO3486 conserved hypothetical protein. 100% identical.; hypothetical protein 575634..576002 Yersinia pseudotuberculosis IP 32953 2953246 YP_069032.1 CDS YPTB0489 NC_006155.1 576026 576337 D similar to Yersinia pestis YPO3485 transcriptional regulatory protein (100% evalue=5.E-51); transcriptional regulator 576026..576337 Yersinia pseudotuberculosis IP 32953 2953247 YP_069033.1 CDS YPTB0490 NC_006155.1 576592 577647 R similar to Yersinia pestis YPO3484 conserved hypothetical protein (99.4% evalue=0); Escherichia coli JW3129 yhbW; Hypothetical protein (o335) (70.6% evalue=1.E-135); hypothetical protein complement(576592..577647) Yersinia pseudotuberculosis IP 32953 2953248 YP_069034.1 CDS YPTB0491 NC_006155.1 578155 579315 D similar to Yersinia pestis YPO3483 multidrug efflux protein (100% evalue=0); Escherichia coli Z2509 efflux pump (65.1% evalue=1.E-117); multidrug efflux protein membrane fusion protein 578155..579315 Yersinia pseudotuberculosis IP 32953 2953249 YP_069035.1 CDS YPTB0492 NC_006155.1 579319 582444 D similar to Yersinia pestis YPO3482 multidrug efflux protein (99.8% evalue=0); Escherichia coli Z2508 efflux pump (71.3% evalue=0); RND family multidrug efflux protein 579319..582444 Yersinia pseudotuberculosis IP 32953 2953250 YP_069036.1 CDS ibeB NC_006155.1 582446 583852 D similar to Yersinia pestis YPO3481 ibeB; probable outer membrane efflux lipoprotein (99.5% evalue=0); Escherichia coli ECs1865 outer membrane channel protein (52.7% evalue=1.E-127); OMF family outer membrane multidrug efflux lipoprotein 582446..583852 Yersinia pseudotuberculosis IP 32953 2955859 YP_069037.1 CDS YPTB0494 NC_006155.1 583993 584871 R similar to Yersinia pestis YPO3480 conserved hypothetical protein (100% evalue=1.E-170); Escherichia coli Z4520 yhbV; orf, hypothetical protein (75.8% evalue=1.E-132); hypothetical protein complement(583993..584871) Yersinia pseudotuberculosis IP 32953 2953251 YP_069038.1 CDS YPTB0495 NC_006155.1 584883 585878 R similar to Yersinia pestis YPO3479 protease (99.3% evalue=0); Salmonella typhimurium STM3274 yhbU; protease (88.8% evalue=1.E-171); protease complement(584883..585878) Yersinia pseudotuberculosis IP 32953 2953252 YP_069039.1 CDS YPTB0496 NC_006155.1 586194 586715 D similar to Yersinia pestis YPO3477 lipid carrier protein (99.4% evalue=2.E-92); Salmonella typhimurium STM3273 yhbT; lipid carrier protein (73.1% evalue=1.E-61); lipid carrier protein 586194..586715 Yersinia pseudotuberculosis IP 32953 2953253 YP_069040.1 CDS YPTB0497 NC_006155.1 586709 587212 D similar to Yersinia pestis YPO3476 acetyltransferase (98.8% evalue=2.E-89); Escherichia coli ECs4037 hypothetical protein (69.4% evalue=7.E-61); acetyltransferase 586709..587212 Yersinia pseudotuberculosis IP 32953 2953254 YP_069041.1 CDS YPTB0498 NC_006155.1 587387 587674 R similar to Yersinia pestis YPO3475 conserved hypothetical protein (98.9% evalue=2.E-47); Salmonella typhimurium STM3271 yhbQ; cytoplasmic protein (70.8% evalue=2.E-27); GIY-YIG nuclease superfamily protein complement(587387..587674) Yersinia pseudotuberculosis IP 32953 2953255 YP_069042.1 CDS YPTB0499 NC_006155.1 587902 589920 R similar to Yersinia pestis YPO3474 hypothetical protein (99.1% evalue=0); hypothetical protein complement(587902..589920) Yersinia pseudotuberculosis IP 32953 2953256 YP_069043.1 CDS YPTB0500 NC_006155.1 589944 591170 R similar to Yersinia pestis YPO3473 exported protein (99.7% evalue=0); hypothetical protein complement(589944..591170) Yersinia pseudotuberculosis IP 32953 2953257 YP_069044.1 CDS YPTB0501 NC_006155.1 591728 593041 D similar to Yersinia pestis YPO3472 sugar binding protein (99.7% evalue=0); Agrobacterium tumefaciens Atu3338 thuE; ABC transporter, substrate binding protein [trehalose/maltose] (25.9% evalue=3.E-20); sugar ABC transporter substrate-binding protein 591728..593041 Yersinia pseudotuberculosis IP 32953 2953258 YP_069045.1 CDS YPTB0502 NC_006155.1 593049 593933 D similar to Yersinia pestis YPO3471 sugar transport system, permease (99.3% evalue=1.E-168); Agrobacterium tumefaciens AGR_pAT_78 probable binding protein dependent transport protein (36% evalue=4.E-46); sugar ABC transporter permease 593049..593933 Yersinia pseudotuberculosis IP 32953 2953259 YP_069046.1 CDS YPTB0503 NC_006155.1 593952 594791 D similar to Yersinia pestis YPO3470 sugar transport system, permease (100% evalue=1.E-158); Synechocystis slr1723 lacG; lactose transport system permease (36.2% evalue=5.E-42); sugar ABC transporter permease 593952..594791 Yersinia pseudotuberculosis IP 32953 2953260 YP_069047.1 CDS YPTB0504 NC_006155.1 594803 595897 D similar to Yersinia pestis YPO3469 sugar ABC transporter, ATP-binding protein (100% evalue=0); Mesorhizobium loti mlr8490 ABC transporter, ATP-binding protein (55.4% evalue=1.E-107); sugar ABC transporter ATP-binding protein 594803..595897 Yersinia pseudotuberculosis IP 32953 2953261 YP_069048.1 CDS YPTB0505 NC_006155.1 595912 597078 D similar to Yersinia pestis YPO3473 exported protein (42.1% evalue=4.E-76); hypothetical protein 595912..597078 Yersinia pseudotuberculosis IP 32953 2953262 YP_069049.1 CDS YPTB0506 NC_006155.1 597207 597650 D similar to Yersinia pestis YPO3467 conserved hypothetical protein (98.6% evalue=4.E-81); Salmonella typhimurium STM3270 yhbP; cytoplasmic protein (48.9% evalue=2.E-35); hypothetical protein 597207..597650 Yersinia pseudotuberculosis IP 32953 2953263 YP_069050.1 CDS YPTB0507 NC_006155.1 597802 598440 D similar to Yersinia pestis YPO3466 conserved hypothetical protein (100% evalue=1.E-117); Salmonella typhimurium STM3268 yraR; nucleoside-diphosphate-sugar epimerase (56% evalue=2.E-59); hypothetical protein 597802..598440 Yersinia pseudotuberculosis IP 32953 2953264 YP_069051.1 CDS phnP NC_006155.1 598486 599238 R required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein complement(598486..599238) Yersinia pseudotuberculosis IP 32953 2956264 YP_069052.1 CDS phnN NC_006155.1 599229 599810 R similar to Yersinia pestis YPO3464 phnN; PhnN protein (100% evalue=1.E-110); Escherichia coli Z5697 phnN; ATP-binding component of phosphonate transport (56.4% evalue=2.E-49); ribose 1,5-bisphosphokinase complement(599229..599810) Yersinia pseudotuberculosis IP 32953 2956263 YP_069053.1 CDS phnM NC_006155.1 599810 600946 R similar to Yersinia pestis YPO3463 phnM; PhnM protein (99.2% evalue=0); Escherichia coli Z5698 phnM; phosphonate metabolism (74% evalue=1.E-163); carbon-phosphorus lyase complex subunit complement(599810..600946) Yersinia pseudotuberculosis IP 32953 2956262 YP_069054.1 CDS phnL NC_006155.1 600943 601662 R similar to Yersinia pestis YPO3462 phnL; phosphonates transport ATP-binding protein (99.5% evalue=1.E-134); Escherichia coli b4096 phnL; phosphonates transport ATP-binding protein phnL (76% evalue=4.E-92); phosphonate ABC transporter ATP binding protein complement(600943..601662) Yersinia pseudotuberculosis IP 32953 2956261 YP_069055.1 CDS phnK NC_006155.1 602051 602842 R similar to Yersinia pestis YPO3461 phnK; phosphonates transport ATP-binding protein (99.6% evalue=1.E-146); Escherichia coli Z5700 phnK; ATP-binding component of phosphonate transport (85% evalue=1.E-119); phosphonate C-P lyase system protein PhnK complement(602051..602842) Yersinia pseudotuberculosis IP 32953 2956260 YP_069056.1 CDS phnJ NC_006155.1 602842 603723 R similar to Yersinia pestis YPO3460 phnJ; PhnJ protein (99.6% evalue=1.E-171); Escherichia coli ECs5081 phosphonate metabolism (85.6% evalue=1.E-142); protein in phn operon complement(602842..603723) Yersinia pseudotuberculosis IP 32953 2956259 YP_069057.1 CDS phnI NC_006155.1 603716 604894 R similar to Yersinia pestis YPO3459 phnI; PhnI protein (98.7% evalue=0); Escherichia coli b4099 phnI; phnI protein (75.2% evalue=1.E-149); carbon-phosphorous lyase subunit complement(603716..604894) Yersinia pseudotuberculosis IP 32953 2956258 YP_069058.1 CDS phnH NC_006155.1 604894 605520 R similar to Yersinia pestis YPO3458 phnH; PhnH protein (99.5% evalue=1.E-118); Escherichia coli ECs5083 phosphonate metabolism (47.3% evalue=4.E-46); carbon-phosphorus lyase complex subunit complement(604894..605520) Yersinia pseudotuberculosis IP 32953 2956257 YP_069059.1 CDS phnG NC_006155.1 605520 605996 R similar to Yersinia pestis YPO3457 phnG; PhnG protein (100% evalue=1.E-86); Escherichia coli b4101 phnG; phnG protein (50% evalue=3.E-35); carbon-phosphorous lyase subunit complement(605520..605996) Yersinia pseudotuberculosis IP 32953 2956256 YP_069060.1 CDS phnF NC_006155.1 605997 606722 R may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF complement(605997..606722) Yersinia pseudotuberculosis IP 32953 2956255 YP_069061.1 CDS nrdG NC_006155.1 607050 607484 R activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein complement(607050..607484) Yersinia pseudotuberculosis IP 32953 2956159 YP_069062.1 CDS nrdD NC_006155.1 607691 609829 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(607691..609829) Yersinia pseudotuberculosis IP 32953 2956156 YP_069063.1 CDS YPTB0520 NC_006155.1 610263 610964 R similar to Yersinia pestis YPO3453 ABC transporter, ATP-binding protein (99.5% evalue=1.E-127); Agrobacterium tumefaciens AGR_L_526 dipeptide transport system ATP-binding protein (50.6% evalue=1.E-57); oligo-dipeptide/nickel ABC transporter ATP-binding protein complement(610263..610964) Yersinia pseudotuberculosis IP 32953 2953265 YP_069064.1 CDS YPTB0521 NC_006155.1 610966 611844 R similar to Yersinia pestis YPO3452 ABC transporter transporter, ATP-binding protein (100% evalue=1.E-166); Mesorhizobium loti mlr5516 oligopeptide ABC transporter, ATP-binding protein (43.6% evalue=5.E-59); oligo-dipeptide/nickel ABC transporter ATP-binding protein complement(610966..611844) Yersinia pseudotuberculosis IP 32953 2953266 YP_069065.1 CDS YPTB0522 NC_006155.1 611837 612673 R similar to Yersinia pestis YPO3451 transporter, permease (100% evalue=1.E-158); Sinorhizobium meliloti SMc01527 dppC2; dipeptide transport system permease ABC transporter protein (59% evalue=2.E-87); oligo-dipeptide/nickel ABC transporter permease complement(611837..612673) Yersinia pseudotuberculosis IP 32953 2953267 YP_069066.1 CDS YPTB0523 NC_006155.1 612692 613741 R similar to Yersinia pestis YPO3450 transporter, permease (100% evalue=0); Sinorhizobium meliloti SMc01526 dppB2; dipeptide transport system permease ABC transporter protein (48.5% evalue=1.E-86); oligo-dipeptide/nickel ABC transporter permease complement(612692..613741) Yersinia pseudotuberculosis IP 32953 2953268 YP_069067.1 CDS YPTB0524 NC_006155.1 613837 615417 R similar to Sinorhizobium meliloti SMc01525 dppA2; dipeptide binding periplasmic protein (40% evalue=1.E-104); Mesorhizobium loti mlr5513 ABC transporter, periplasmic oligopeptide-binding protein (41% evalue=1.E-106); oligo-dipeptide/nickel ABC transporter substrate-binding protein complement(613837..615417) Yersinia pseudotuberculosis IP 32953 2953269 YP_069068.1 CDS YPTB0525 NC_006155.1 616044 616502 D similar to Yersinia pestis YPO3447 conserved hypothetical protein (100% evalue=2.E-84); Escherichia coli Z5864 yjgK; orf, hypothetical protein (71.1% evalue=3.E-58); hypothetical protein 616044..616502 Yersinia pseudotuberculosis IP 32953 2953270 YP_069069.1 CDS argI NC_006155.1 616765 617772 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I complement(616765..617772) Yersinia pseudotuberculosis IP 32953 2955218 YP_069070.1 CDS YPTB0527 NC_006155.1 617983 618414 D similar to Yersinia pestis YPO3445 conserved hypothetical protein (100% evalue=9.E-79); Escherichia coli ECs5232 hypothetical protein (76.2% evalue=7.E-58); hypothetical protein 617983..618414 Yersinia pseudotuberculosis IP 32953 2953271 YP_069071.1 CDS yjgM NC_006155.1 618773 619276 R similar to Yersinia pestis YPO3444 acetyltransferase (99.4% evalue=1.E-91); Salmonella typhimurium STM4473 yjgM; acetyltransferase (71% evalue=6.E-61); acetyltransferase complement(618773..619276) Yersinia pseudotuberculosis IP 32953 2957085 YP_069072.1 CDS valS NC_006155.1 619419 622316 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(619419..622316) Yersinia pseudotuberculosis IP 32953 2956890 YP_069073.1 CDS holC NC_006155.1 622329 622778 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(622329..622778) Yersinia pseudotuberculosis IP 32953 2955820 YP_069074.1 CDS pepA NC_006155.1 622929 624440 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(622929..624440) Yersinia pseudotuberculosis IP 32953 2956230 YP_069075.1 CDS yjgP NC_006155.1 624720 625814 D similar to Yersinia pestis YPO3440 membrane protein (99.7% evalue=0); Salmonella typhimurium STM4479 yjgP; permease (72.7% evalue=1.E-148); permease 624720..625814 Yersinia pseudotuberculosis IP 32953 2957086 YP_069076.1 CDS yjgQ NC_006155.1 625814 626890 D similar to Yersinia pestis YPO3439 membrane protein (100% evalue=0); Escherichia coli Z5874 yjgQ; orf, hypothetical protein (76.6% evalue=1.E-159); permease 625814..626890 Yersinia pseudotuberculosis IP 32953 2957087 YP_069077.1 CDS YPTB0535 NC_006155.1 628794 632042 R similar to Ureaplasma urealyticum UU095 hsdR; type I restriction enzyme R protein (26.8% evalue=2.E-71); Listeria innocua lin0521 similar to HsdR type IC restriction subunit (30.9% evalue=1.E-97); type I restriction enzyme, R subunit complement(628794..632042) Yersinia pseudotuberculosis IP 32953 2953273 YP_069078.1 CDS YPTB0536 NC_006155.1 632052 633335 R similar to Streptococcus pyogenes SPy1905 hsdS; type I restriction enzyme, S subunit (26% evalue=8.E-30); Staphylococcus aureus_N315 SA0392 hsdS; type I restriction enzyme, S subunit (25.1% evalue=2.E-18); type I restriction enzyme, S subunit complement(632052..633335) Yersinia pseudotuberculosis IP 32953 2953274 YP_069079.1 CDS YPTB0537 NC_006155.1 633337 635928 R similar to Streptococcus pyogenes SPy1906 hsdM; type I restriction enzyme M protein (43% evalue=1.E-101); Lactococcus lactis L0309 hsdM; type I restriction enzyme M protein (40.2% evalue=1.E-101); type I restriction-modification system, methyltransferase subunit (N-6 DNA methylase) complement(633337..635928) Yersinia pseudotuberculosis IP 32953 2953275 YP_069080.1 CDS YPTB0538 NC_006155.1 636271 637317 R similar to Yersinia pestis YPO0398 M48 peptidase family protein (99.7% evalue=0); Sinorhizobium meliloti SMc00783 hypothetical transmembrane protein (26.4% evalue=2.E-25); M48 peptidase family protein complement(636271..637317) Yersinia pseudotuberculosis IP 32953 2953276 YP_069081.1 CDS YPTB0539 NC_006155.1 637364 638560 R similar to Yersinia pestis YPO0399 membrane protein (98.7% evalue=0); Salmonella typhimurium STM4474 yjgN; inner membrane protein (30.2% evalue=1.E-43); hypothetical protein complement(637364..638560) Yersinia pseudotuberculosis IP 32953 2953277 YP_069082.1 CDS YPTB0540 NC_006155.1 639266 639802 D similar to Yersinia pestis YPO0400 hypothetical protein (100% evalue=1.E-102); hypothetical protein 639266..639802 Yersinia pseudotuberculosis IP 32953 2953278 YP_069083.1 CDS YPTB0541 NC_006155.1 639804 640679 D similar to Yersinia pestis YPO0401 transcriptional regulator (99.6% evalue=1.E-166); Salmonella typhimurium STM4117 yijO; paral regulator (AraC/XylS family) (54.9% evalue=2.E-86); transcriptional regulator 639804..640679 Yersinia pseudotuberculosis IP 32953 2953279 YP_069084.1 CDS frwD NC_006155.1 640672 641016 R FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog; fructose-like phosphotransferase EIIB subunit 3 complement(640672..641016) Yersinia pseudotuberculosis IP 32953 2955649 YP_069085.1 CDS frwB NC_006155.1 641109 641429 R FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; PTS system fructose-like transporter subunit IIB complement(641109..641429) Yersinia pseudotuberculosis IP 32953 2955647 YP_069086.2 CDS frwC NC_006155.1 641552 642634 R FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; fructose-like permease EIIC subunit 2 complement(641552..642634) Yersinia pseudotuberculosis IP 32953 2955648 YP_069087.1 CDS pstA NC_006155.1 642999 645539 D similar to Yersinia pestis YPO0405 phosphotransferase system, enzyme I / PTS system, fructose-specific IIA component (97.1% evalue=0); Salmonella typhimurium STM4110 ptsA (63.7% evalue=0); PTS family transporter enzyme I phosphohistidine subunit 642999..645539 Yersinia pseudotuberculosis IP 32953 2956348 YP_069088.1 CDS YPTB0546 NC_006155.1 645601 646092 R similar to Yersinia pestis YPO0406 exported protein (100% evalue=8.E-86); Escherichia coli ECs5320 glycoprotein/receptor (46.2% evalue=3.E-32); hypothetical protein complement(645601..646092) Yersinia pseudotuberculosis IP 32953 2953280 YP_069089.1 CDS yneC NC_006155.1 646415 646705 R similar to Yersinia pestis YPO0407 conserved hypothetical protein (100% evalue=5.E-51); Salmonella typhi STY3791 conserved hypothetical protein (79.1% evalue=4.E-40); autoinducer-2 (AI-2) modifying protein LsrG complement(646415..646705) Yersinia pseudotuberculosis IP 32953 2957098 YP_069090.1 CDS yneB NC_006155.1 646769 647644 R similar to Yersinia pestis YPO0408 aldolase (99.6% evalue=1.E-163); Salmonella typhimurium STM4078 yneB; fructose-1,6-bisphosphate aldolase (85.5% evalue=1.E-142); aldolase complement(646769..647644) Yersinia pseudotuberculosis IP 32953 2957097 YP_069091.1 CDS YPTB0549 NC_006155.1 647700 648719 R similar to Yersinia pestis YPO0409 periplasmic solute-binding protein (99.7% evalue=0); Escherichia coli ECs2123 LACI-type transcriptional regulator (84.4% evalue=1.E-163); sugar ABC transporter substrate-binding protein complement(647700..648719) Yersinia pseudotuberculosis IP 32953 2953281 YP_069092.1 CDS ydeZ NC_006155.1 648764 649765 R similar to Yersinia pestis YPO0410 ABC transporter permease (99.6% evalue=0); Salmonella typhimurium STM4076 ydeZ; ABC superfamily (membrane), sugar transport protein (79.5% evalue=1.E-149); sugar ABC transporter permease complement(648764..649765) Yersinia pseudotuberculosis IP 32953 2956992 YP_069093.1 CDS ydeY NC_006155.1 649762 650817 R similar to Yersinia pestis YPO0411 ABC transporter permease (98.8% evalue=0); Escherichia coli b1514 ydeY; simple sugar transport system permease (75.7% evalue=1.E-148); sugar ABC transporter permease complement(649762..650817) Yersinia pseudotuberculosis IP 32953 2956991 YP_069094.1 CDS ego NC_006155.1 650811 652394 R similar to Yersinia pestis YPO0412 ABC transporter ATP-binding protein (98.6% evalue=0); Salmonella typhimurium STM4074 ego; ABC-type sugar, aldose transport system, ATPase component (67.4% evalue=0); sugar ABC transporter ATPase complement(650811..652394) Yersinia pseudotuberculosis IP 32953 2955498 YP_069095.1 CDS ydeW NC_006155.1 652739 653752 D similar to Salmonella typhi STY3797 ydeW; regulatory protein (69.6% evalue=1.E-120); Salmonella typhimurium STM4073 ydeW; transcriptional repressor (69.2% evalue=1.E-120); transcriptional repressor 652739..653752 Yersinia pseudotuberculosis IP 32953 2956990 YP_069096.1 CDS ydeV NC_006155.1 653923 655515 D similar to Yersinia pestis YPO0415 carbohydrate kinase (99.8% evalue=0); Salmonella typhi STY3798 ydeV; sugar kinase (80.9% evalue=0); autoinducer-2 (AI-2) kinase 653923..655515 Yersinia pseudotuberculosis IP 32953 2956989 YP_069097.1 CDS YPTB0555 NC_006155.1 655984 657024 D similar to Yersinia pestis YPO0416 lipopolysaccharide core biosynthesis protein (99.4% evalue=0); Escherichia coli ECs4507 lipopolysaccharide core biosynthesis protein RfaQ (41.5% evalue=5.E-63); lipopolysaccharide core biosynthesis protein 655984..657024 Yersinia pseudotuberculosis IP 32953 2953282 YP_069098.1 CDS YPTB0556 NC_006155.1 657072 658298 D similar to Yersinia pestis YPO0417 O-antigen biosynthesis protein (100% evalue=0); H. influenzae HI0874 hypothetical protein HI0874 (25.1% evalue=2.E-08); O-antigen biosynthesis protein 657072..658298 Yersinia pseudotuberculosis IP 32953 2953283 YP_069099.1 CDS YPTB0557 NC_006155.1 658664 659932 D similar to Salmonella typhimurium STM1373 sufS; selenocysteine lyase (48.6% evalue=1.E-108); M. leprae ML0842 conserved hypothetical protein (48.6% evalue=1.E-110); cysteine desulfurase 658664..659932 Yersinia pseudotuberculosis IP 32953 2953284 YP_069100.1 CDS YPTB0558 NC_006155.1 659979 661157 D similar to Thermoplasma volcanium TVG1333406 isovaleryl-CoA dehydrogenase precursor (24.7% evalue=5.E-23); A. fulgidus AF2244 acd-11; acyl-CoA dehydrogenase (27.2% evalue=2.E-25); acyl-CoA dehydrogenase 659979..661157 Yersinia pseudotuberculosis IP 32953 2953285 YP_069101.1 CDS YPTB0559 NC_006155.1 661159 661434 D . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 661159..661434 Yersinia pseudotuberculosis IP 32953 2953286 YP_069102.1 CDS YPTB0560 NC_006155.1 661436 662272 D . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 661436..662272 Yersinia pseudotuberculosis IP 32953 2953287 YP_069103.1 CDS YPTB0561 NC_006155.1 662305 663531 D similar to Mycobacterium tuberculosis_CDC1551MT3301 HesA/MoeB/ThiF family protein (42.6% evalue=4.E-74); Anabaena all2906 moeB; molybdopterin biosynthesis protein (45% evalue=3.E-76); molybdopterin biosynthesis protein 662305..663531 Yersinia pseudotuberculosis IP 32953 2953288 YP_069104.1 CDS YPTB0562 NC_006155.1 663710 663949 R similar to Bacillus halodurans transposase related protein (weak) ref|NP_243386.1|, evalue=0.092, 33% identity in 56 aa. This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein complement(663710..663949) Yersinia pseudotuberculosis IP 32953 2953289 YP_069105.1 CDS YPTB0563 NC_006155.1 664447 664644 D similar to Yersinia pestis YPO0418 membrane protein. 95% identical; hypothetical protein 664447..664644 Yersinia pseudotuberculosis IP 32953 2953290 YP_069106.1 CDS YPTB0564 NC_006155.1 664671 664904 D similar to Yersinia pestis YPO0419 exported protein (98.7% evalue=2.E-36); hypothetical protein 664671..664904 Yersinia pseudotuberculosis IP 32953 2953291 YP_069107.1 CDS YPTB0565 NC_006155.1 664956 666038 D similar to Yersinia pestis YPO0420 lipoprotein (99.7% evalue=0); Vibrio cholerae VC1674 periplasmic linker protein, (28.1% evalue=7.E-40); lipoprotein heavy metal/multidrug efflux protein 664956..666038 Yersinia pseudotuberculosis IP 32953 2953292 YP_069108.1 CDS YPTB0566 NC_006155.1 666038 669124 D similar to Yersinia pestis YPO0421 multi-drug efflux protein (99.9% evalue=0); Vibrio cholerae VC1673 transporter, AcrB/D/F family (50.8% evalue=0); heavy metal/multi-drug efflux protein 666038..669124 Yersinia pseudotuberculosis IP 32953 2953293 YP_069109.1 CDS YPTB0567 NC_006155.1 669487 669819 R similar to Yersinia pestis YPO0422 hypothetical protein (100% evalue=4.E-58); hypothetical protein complement(669487..669819) Yersinia pseudotuberculosis IP 32953 2953294 YP_069110.1 CDS YPTB0568 NC_006155.1 669966 670313 R similar to Yersinia pestis YPO0423 hypothetical protein (98.8% evalue=4.E-43); hypothetical protein complement(669966..670313) Yersinia pseudotuberculosis IP 32953 2953295 YP_069111.1 CDS YPTB0569 NC_006155.1 670620 671705 D similar to Yersinia pestis YPO0424 pectinesterase (100% evalue=0); A. thalianan At5g49180 K21P3.5; pectin methylesterase (32.6% evalue=1.E-27); pectinesterase A 670620..671705 Yersinia pseudotuberculosis IP 32953 2953296 YP_069112.1 CDS hmsT NC_006155.1 672246 673418 R similar to Yersinia pestis YPO0425 hmsT; HmsT protein (98.9% evalue=0); Salmonella typhimurium STM4551 diguanylate cyclase/phosphodiesterase domain 1 (44.2% evalue=3.E-80); diguanylate cyclase/phosphodiesterase complement(672246..673418) Yersinia pseudotuberculosis IP 32953 2955809 YP_069113.1 CDS YPTB0571 NC_006155.1 673760 673999 D similar to Yersinia pestis YPO0426 membrane protein (98.7% evalue=2.E-38); Salmonella typhimurium STM4552 inner membrane protein (46.5% evalue=6.E-15); hypothetical protein 673760..673999 Yersinia pseudotuberculosis IP 32953 2953297 YP_069114.1 CDS rsmC NC_006155.1 674877 675920 R 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase complement(674877..675920) Yersinia pseudotuberculosis IP 32953 2956556 YP_069115.1 CDS holD NC_006155.1 676033 676470 D with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 676033..676470 Yersinia pseudotuberculosis IP 32953 2955821 YP_069116.1 CDS rimI NC_006155.1 676415 676858 D alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 676415..676858 Yersinia pseudotuberculosis IP 32953 2956456 YP_069117.1 CDS prfC NC_006155.1 677036 678625 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 677036..678625 Yersinia pseudotuberculosis IP 32953 2956317 YP_069118.1 CDS osmY NC_006155.1 678953 679567 D similar to Yersinia pestis YPO0431 osmY; osmotically inducible protein Y (99% evalue=1.E-103); Salmonella typhi STY4911 osmY; periplasmic protein (63.5% evalue=3.E-66); hypothetical protein 678953..679567 Yersinia pseudotuberculosis IP 32953 2956201 YP_069119.1 CDS YPTB0577 NC_006155.1 679734 679895 D similar to Yersinia pestis YPO0432 exported protein (98.1% evalue=3.E-22); Escherichia coli Z5978 hypothetical protein (90.3% evalue=7.E-20); hypothetical protein 679734..679895 Yersinia pseudotuberculosis IP 32953 2953298 YP_069120.1 CDS yjjU NC_006155.1 679969 681240 D similar to Yersinia pestis YPO0433 conserved hypothetical protein (99.7% evalue=0); Escherichia coli JW4340 yjjU; Hypothetical protein (65.6% evalue=1.E-128); hypothetical protein 679969..681240 Yersinia pseudotuberculosis IP 32953 2957090 YP_069121.1 CDS yjjV NC_006155.1 681277 682065 D similar to Yersinia pestis YPO0434 metalloenzyme (99.6% evalue=1.E-147); Escherichia coli JW4341 yjjV; Hypothetical protein (63.9% evalue=2.E-89); hydrolase 681277..682065 Yersinia pseudotuberculosis IP 32953 2957091 YP_069122.1 CDS YPTB0580 NC_006155.1 682600 683871 D similar to Yersinia pestis YPO0435 Na+ dependent nucleoside transporter-family protein (99.5% evalue=0); Vibrio cholerae VC2352 NupC family protein (72.2% evalue=1.E-169); Na+ dependent nucleoside transporter-family protein 682600..683871 Yersinia pseudotuberculosis IP 32953 2953299 YP_069123.1 CDS deoC NC_006155.1 684500 685297 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 684500..685297 Yersinia pseudotuberculosis IP 32953 2955452 YP_069124.1 CDS deoA NC_006155.1 685418 686740 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 685418..686740 Yersinia pseudotuberculosis IP 32953 2955449 YP_069125.1 CDS deoB NC_006155.1 686872 688095 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 686872..688095 Yersinia pseudotuberculosis IP 32953 2955450 YP_069126.1 CDS deoD NC_006155.1 688220 688939 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 688220..688939 Yersinia pseudotuberculosis IP 32953 2955453 YP_069127.1 CDS smp NC_006155.1 689051 689752 R similar to Yersinia pestis YPO0441 smp; membrane protein (100% evalue=1.E-125); Salmonella typhi STY4924 smp; membrane protein (65.4% evalue=2.E-75); hypothetical protein complement(689051..689752) Yersinia pseudotuberculosis IP 32953 2956615 YP_069128.1 CDS serB NC_006155.1 689986 690966 D catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 689986..690966 Yersinia pseudotuberculosis IP 32953 2956595 YP_069129.1 CDS radA NC_006155.1 691085 692467 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 691085..692467 Yersinia pseudotuberculosis IP 32953 2956397 YP_069130.1 CDS nadR NC_006155.1 692626 693897 D catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 692626..693897 Yersinia pseudotuberculosis IP 32953 2956118 YP_069131.1 CDS YPTB0589 NC_006155.1 694054 695184 D similar to Yersinia pestis YPO0445 conserved hypothetical protein (99.2% evalue=0); Pseudomonas aeruginosa PA0574 hypothetical protein (56.3% evalue=1.E-116); hypothetical protein 694054..695184 Yersinia pseudotuberculosis IP 32953 2953300 YP_069132.1 CDS yjjK NC_006155.1 695345 697012 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein complement(695345..697012) Yersinia pseudotuberculosis IP 32953 2957088 YP_069133.1 CDS YPTB0591 NC_006155.1 697195 697701 R similar to Yersinia pestis YPO0448 lipoprotein (98.7% evalue=2.E-88); Pseudomonas aeruginosa PA1119 probable outer membrane lipoprotein (52.4% evalue=5.E-37); OmpA/OmpF family outer membrane porin complement(697195..697701) Yersinia pseudotuberculosis IP 32953 2953301 YP_069134.1 CDS YPTB0592 NC_006155.1 697707 698984 R similar to Yersinia pestis YPO0449 exported protein (100% evalue=0); Pseudomonas aeruginosa PA1120 conserved hypothetical protein (55.6% evalue=1.E-117); hypothetical protein complement(697707..698984) Yersinia pseudotuberculosis IP 32953 2953302 YP_069135.1 CDS YPTB0593 NC_006155.1 699005 699628 R similar to Yersinia pestis YPO0450 membrane protein (100% evalue=1.E-117); Pseudomonas aeruginosa PA1121 conserved hypothetical protein (43.2% evalue=2.E-33); hypothetical protein complement(699005..699628) Yersinia pseudotuberculosis IP 32953 2953303 YP_069136.1 CDS YPTB0594 NC_006155.1 700003 702729 R similar to Yersinia pestis YPO0451 cation-transporting P-type ATPase (99.8% evalue=0); Pseudomonas aeruginosa PA1429 probable cation-transporting P-type ATPase (44.2% evalue=0); Ca++ transporting P-type ATPase complement(700003..702729) Yersinia pseudotuberculosis IP 32953 2953304 YP_069137.1 CDS slt NC_006155.1 703299 705218 D catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 703299..705218 Yersinia pseudotuberculosis IP 32953 2956609 YP_069138.1 CDS trpR NC_006155.1 705489 705866 D When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 705489..705866 Yersinia pseudotuberculosis IP 32953 2956832 YP_069139.1 CDS YPTB0597 NC_006155.1 705863 706405 R pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase complement(705863..706405) Yersinia pseudotuberculosis IP 32953 2953305 YP_069140.1 CDS gpmB NC_006155.1 706515 707162 D catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 706515..707162 Yersinia pseudotuberculosis IP 32953 2955740 YP_069141.1 CDS rob NC_006155.1 707159 708025 R similar to Yersinia pestis YPO0456 rob; right origin-binding protein (100% evalue=1.E-170); Salmonella typhimurium STM4586 rob; transcriptional regulator (AraC/XylS family) (67.4% evalue=1.E-112); AraC family transcriptional regulator complement(707159..708025) Yersinia pseudotuberculosis IP 32953 2956477 YP_069142.1 CDS creA NC_006155.1 708251 708718 D similar to Yersinia pestis YPO0457 creA; exported protein (100% evalue=2.E-84); Salmonella typhi STY4934 creA; conserved hypothetical protein (79.7% evalue=7.E-67); hypothetical protein 708251..708718 Yersinia pseudotuberculosis IP 32953 2955357 YP_069143.1 CDS arcA NC_006155.1 708892 709608 R similar to Yersinia pestis YPO0458 arcA, dye, fexA, sfrA, seg, msp, cpxC; aerobic respiration control protein (100% evalue=1.E-135); Escherichia coli Z6004 arcA; negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) (92.8% evalue=1.E-125); two-component response regulator complement(708892..709608) Yersinia pseudotuberculosis IP 32953 2955210 YP_069144.1 CDS thrA NC_006155.1 710712 713171 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 710712..713171 Yersinia pseudotuberculosis IP 32953 2956700 YP_069145.1 CDS thrB NC_006155.1 713174 714103 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 713174..714103 Yersinia pseudotuberculosis IP 32953 2956701 YP_069146.1 CDS thrC NC_006155.1 714107 715396 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 714107..715396 Yersinia pseudotuberculosis IP 32953 2956702 YP_069147.1 CDS yaaA NC_006155.1 716213 716989 R similar to Yersinia pestis YPO0462 conserved hypothetical protein (100% evalue=1.E-144); Escherichia coli JW0005 yaaA; inner membrane transport protein (78.5% evalue=1.E-113); hypothetical protein complement(716213..716989) Yersinia pseudotuberculosis IP 32953 2956916 YP_069148.1 CDS talB NC_006155.1 717504 718457 D Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 717504..718457 Yersinia pseudotuberculosis IP 32953 2956657 YP_069149.1 CDS mogA NC_006155.1 718745 719332 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 718745..719332 Yersinia pseudotuberculosis IP 32953 2956066 YP_069150.1 CDS YPTB0608 NC_006155.1 719460 720839 D similar to Yersinia pestis YPO0465 transport protein (99.3% evalue=0); Pseudomonas aeruginosa PA5370 probable MFS transporter (68.9% evalue=1.E-165); major facilitator superfamily proline/glycine/betaine permease 719460..720839 Yersinia pseudotuberculosis IP 32953 2953306 YP_069151.1 CDS YPTB0609 NC_006155.1 720917 723373 R similar to Yersinia pestis YPO2884 exported protein (34% evalue=1.E-128); hypothetical protein complement(720917..723373) Yersinia pseudotuberculosis IP 32953 2953307 YP_069152.1 CDS yaaH NC_006155.1 723664 724275 R similar to Yersinia pestis YPO0467 yaaH; membrane protein (98.5% evalue=1.E-111); Salmonella typhimurium STM0009 yaaH; regulator (76.3% evalue=2.E-79); hypothetical protein complement(723664..724275) Yersinia pseudotuberculosis IP 32953 2956917 YP_069153.1 CDS dnaK NC_006155.1 724649 726559 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 724649..726559 Yersinia pseudotuberculosis IP 32953 2955475 YP_069154.1 CDS dnaJ NC_006155.1 726671 727810 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 726671..727810 Yersinia pseudotuberculosis IP 32953 2955474 YP_069155.1 CDS nhaA NC_006155.1 728053 729237 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 728053..729237 Yersinia pseudotuberculosis IP 32953 2956137 YP_069156.1 CDS nhaR NC_006155.1 729367 730266 D Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 729367..730266 Yersinia pseudotuberculosis IP 32953 2956139 YP_069157.1 CDS rpsT NC_006155.1 730397 730660 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(730397..730660) Yersinia pseudotuberculosis IP 32953 2956547 YP_069158.1 CDS ribF NC_006155.1 731075 732013 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 731075..732013 Yersinia pseudotuberculosis IP 32953 2956454 YP_069159.1 CDS ileS NC_006155.1 732045 734861 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 732045..734861 Yersinia pseudotuberculosis IP 32953 2955869 YP_069160.1 CDS lspA NC_006155.1 734861 735370 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 734861..735370 Yersinia pseudotuberculosis IP 32953 2955972 YP_069161.1 CDS fkpB NC_006155.1 735438 735896 D similar to Yersinia pestis YPO0476a fkpB, slpA; FKBP-type peptidyl-prolyl cis-trans isomerase (99.3% evalue=3.E-82); Salmonella typhi STY0057 fkpB; probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase (69.4% evalue=3.E-54); FKBP-type peptidylprolyl isomerase 735438..735896 Yersinia pseudotuberculosis IP 32953 2955553 YP_069162.1 CDS ispH NC_006155.1 735877 736830 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 735877..736830 Yersinia pseudotuberculosis IP 32953 2955981 YP_069163.1 CDS tnp NC_006155.1 737060 737518 D similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 737060..737518 Yersinia pseudotuberculosis IP 32953 2956710 YP_069164.1 CDS dapB NC_006155.1 738009 738830 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 738009..738830 Yersinia pseudotuberculosis IP 32953 2955427 YP_069165.1 CDS carA NC_006155.1 739303 740478 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 739303..740478 Yersinia pseudotuberculosis IP 32953 2955303 YP_069166.1 CDS carB NC_006155.1 740494 743727 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 740494..743727 Yersinia pseudotuberculosis IP 32953 2955304 YP_069167.1 CDS YPTB0625 NC_006155.1 743953 744567 R similar to Yersinia pestis YPO0483 LysE type translocator (96.5% evalue=1.E-109); Pseudomonas aeruginosa PA2710 hypothetical protein (73.8% evalue=3.E-81); RhtB/LysE family threonine efflux pump complement(743953..744567) Yersinia pseudotuberculosis IP 32953 2953308 YP_069168.1 CDS yjjP NC_006155.1 744882 745682 D similar to Yersinia pestis YPO0484 yjjP; membrane protein (99.6% evalue=1.E-148); Salmonella typhi STY4899 membrane protein (74% evalue=1.E-107); transmembrane protein 744882..745682 Yersinia pseudotuberculosis IP 32953 2957089 YP_069169.2 CDS YPTB0627 NC_006155.1 745673 746143 D similar to Yersinia pestis YPO0485 membrane protein (97.4% evalue=8.E-79); Salmonella typhimurium STM4545 inner membrane protein (75.9% evalue=3.E-63); hypothetical protein 745673..746143 Yersinia pseudotuberculosis IP 32953 2953309 YP_069170.1 CDS folA NC_006155.1 746293 746775 D catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 746293..746775 Yersinia pseudotuberculosis IP 32953 2955630 YP_069171.1 CDS YPTB0629 NC_006155.1 747266 747541 D similar to Yersinia pestis YPO488 with a frameshift. Either this gene or the Yersinia pestis gene are a possible pseudogene.; hypothetical protein 747266..747541 Yersinia pseudotuberculosis IP 32953 2953310 YP_069172.1 CDS YPTB0630 NC_006155.1 747614 748078 D similar to Yersinia pestis YPO0489 exported protein (96.1% evalue=3.E-84); hypothetical protein 747614..748078 Yersinia pseudotuberculosis IP 32953 2953311 YP_069173.1 CDS apaH NC_006155.1 748168 749037 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(748168..749037) Yersinia pseudotuberculosis IP 32953 2955199 YP_069174.1 CDS apaG NC_006155.1 749054 749431 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(749054..749431) Yersinia pseudotuberculosis IP 32953 2955198 YP_069175.1 CDS ksgA NC_006155.1 749445 750263 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(749445..750263) Yersinia pseudotuberculosis IP 32953 2955927 YP_069176.1 CDS pdxA NC_006155.1 750256 751251 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(750256..751251) Yersinia pseudotuberculosis IP 32953 2956222 YP_069177.1 CDS surA NC_006155.1 751235 752539 R Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA complement(751235..752539) Yersinia pseudotuberculosis IP 32953 2956653 YP_069178.1 CDS imp NC_006155.1 752607 754949 R determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein complement(752607..754949) Yersinia pseudotuberculosis IP 32953 2955883 YP_069179.1 CDS djlA NC_006155.1 755134 755967 D functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 755134..755967 Yersinia pseudotuberculosis IP 32953 2955461 YP_069180.1 CDS rluA NC_006155.1 756284 756904 R similar to Yersinia pestis YPO0497 rluA; ribosomal large subunit pseudouridine synthase A (100% evalue=1.E-118); Escherichia coli b0058 rluA; ribosomal large subunit pseudouridine synthase A. (pseudouridylate synthase) (uracil hydrolyase) (77.1% evalue=2.E-90); 23S rRNA pseudouridylate 746 synthase complement(756284..756904) Yersinia pseudotuberculosis IP 32953 2956462 YP_069181.1 CDS YPTB0639 NC_006155.1 758127 758870 R similar to Yersinia pestis YPO0498 hypothetical protein (100% evalue=1.E-144); hypothetical protein complement(758127..758870) Yersinia pseudotuberculosis IP 32953 2953312 YP_069182.1 CDS YPTB0640 NC_006155.1 759200 760213 D similar to Yersinia pestis YPO0499 hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0082 hypothetical protein (33.8% evalue=1.E-07); hypothetical protein 759200..760213 Yersinia pseudotuberculosis IP 32953 2953313 YP_069183.1 CDS YPTB0641 NC_006155.1 760224 760784 D similar to Yersinia pestis YPO0500 conserved hypothetical protein (100% evalue=1.E-101); Pseudomonas aeruginosa PA0083 conserved hypothetical protein (59.8% evalue=9.E-50); hypothetical protein 760224..760784 Yersinia pseudotuberculosis IP 32953 2953314 YP_069184.1 CDS YPTB0642 NC_006155.1 760784 762295 D similar to Yersinia pestis YPO0501 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0084 conserved hypothetical protein (63.8% evalue=0); hypothetical protein 760784..762295 Yersinia pseudotuberculosis IP 32953 2953315 YP_069185.1 CDS YPTB0643 NC_006155.1 762458 762976 D similar to Yersinia pestis YPO0502 conserved hypothetical protein (100% evalue=8.E-98); Pseudomonas aeruginosa PA0085 conserved hypothetical protein (38.9% evalue=2.E-27); hypothetical protein 762458..762976 Yersinia pseudotuberculosis IP 32953 2953316 YP_069186.1 CDS YPTB0644 NC_006155.1 763050 763493 D similar to Yersinia pestis YPO0503 conserved hypothetical protein (100% evalue=4.E-80); Salmonella typhimurium STM0269 cytoplasmic protein (33% evalue=4.E-10); hypothetical protein 763050..763493 Yersinia pseudotuberculosis IP 32953 2953317 YP_069187.1 CDS YPTB0645 NC_006155.1 763526 765370 D similar to Yersinia pestis YPO0504 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0088 hypothetical protein (29.4% evalue=3.E-57); hypothetical protein 763526..765370 Yersinia pseudotuberculosis IP 32953 2953318 YP_069188.1 CDS YPTB0646 NC_006155.1 765363 766346 D similar to Yersinia pestis YPO0505 conserved hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0089 hypothetical protein (27.9% evalue=9.E-25); hypothetical protein 765363..766346 Yersinia pseudotuberculosis IP 32953 2953319 YP_069189.1 CDS clpB NC_006155.1 766349 768952 D similar to Yersinia pestis YPO0506 clpB, htpM; Clp ATPase (100% evalue=0); Pseudomonas aeruginosa PA0090 probable ClpA/B-type chaperone (44.4% evalue=0); ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE 766349..768952 Yersinia pseudotuberculosis IP 32953 2955333 YP_069190.1 CDS YPTB0648 NC_006155.1 769056 771404 D similar to Yersinia pestis YPO0507 conserved hypothetical protein (99.8% evalue=0); Pseudomonas aeruginosa PA0095 conserved hypothetical protein (36.1% evalue=6.E-96); hypothetical protein 769056..771404 Yersinia pseudotuberculosis IP 32953 2953320 YP_069191.1 CDS YPTB0649 NC_006155.1 771417 773636 D similar to Yersinia pestis YPO0509 hypothetical protein (99.6% evalue=0); hypothetical protein 771417..773636 Yersinia pseudotuberculosis IP 32953 2953321 YP_069192.1 CDS YPTB0650 NC_006155.1 773662 774765 D similar to Yersinia pestis YPO0510 hypothetical protein (100% evalue=0); Anabaena alr1142 hypothetical protein (33.8% evalue=8.E-10); hypothetical protein 773662..774765 Yersinia pseudotuberculosis IP 32953 2953322 YP_069193.1 CDS YPTB0651 NC_006155.1 774758 775375 D similar to Yersinia pestis YPO0511 hypothetical protein (100% evalue=1.E-112); hypothetical protein 774758..775375 Yersinia pseudotuberculosis IP 32953 2953323 YP_069194.1 CDS YPTB0652 NC_006155.1 775381 775746 D similar to Yersinia pestis YPO0511a hypothetical protein (100% evalue=6.E-67); hypothetical protein 775381..775746 Yersinia pseudotuberculosis IP 32953 2953324 YP_069195.1 CDS YPTB0653 NC_006155.1 775739 776230 D similar to Yersinia pestis YPO0512 lipoprotein (99.3% evalue=1.E-88); lipoprotein 775739..776230 Yersinia pseudotuberculosis IP 32953 2953325 YP_069196.1 CDS YPTB0654 NC_006155.1 776350 777705 D similar to Yersinia pestis YPO0513 conserved hypothetical protein (100% evalue=0); Pseudomonas aeruginosa PA0079 hypothetical protein (34.6% evalue=2.E-72); hypothetical protein 776350..777705 Yersinia pseudotuberculosis IP 32953 2953326 YP_069197.1 CDS YPTB0655 NC_006155.1 777702 779312 D similar to Yersinia pestis YPO0514 OmpA-family membrane protein (99.8% evalue=0); Salmonella typhi STY0305 membrane protein (29.3% evalue=3.E-26); hypothetical protein 777702..779312 Yersinia pseudotuberculosis IP 32953 2953327 YP_069198.1 CDS YPTB0656 NC_006155.1 779321 782815 D similar to Yersinia pestis YPO0515 membrane protein (99.8% evalue=0); Pseudomonas aeruginosa PA0077 hypothetical protein (25.2% evalue=3.E-93); hypothetical protein 779321..782815 Yersinia pseudotuberculosis IP 32953 2953328 YP_069199.1 CDS YPTB0657 NC_006155.1 782837 783190 D similar to Yersinia pestis YPO0516 hypothetical protein (100% evalue=1.E-61); hypothetical protein 782837..783190 Yersinia pseudotuberculosis IP 32953 2953329 YP_069200.1 CDS rapA NC_006155.1 783446 786352 R transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA complement(783446..786352) Yersinia pseudotuberculosis IP 32953 2956400 YP_069201.1 CDS polB NC_006155.1 786813 789182 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(786813..789182) Yersinia pseudotuberculosis IP 32953 2956295 YP_069202.1 CDS YPTB0660 NC_006155.1 789378 790145 D similar to Yersinia pestis YPO0519 DedA-family membrane protein (100% evalue=1.E-148); Escherichia coli Z0074 yabI; orf, hypothetical protein (58.8% evalue=3.E-84); DedA family membrane protein 789378..790145 Yersinia pseudotuberculosis IP 32953 2953330 YP_069203.2 CDS thiQ NC_006155.1 790214 790924 R with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit complement(790214..790924) Yersinia pseudotuberculosis IP 32953 2956698 YP_069204.1 CDS thiP NC_006155.1 790911 792518 R permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein complement(790911..792518) Yersinia pseudotuberculosis IP 32953 2956697 YP_069205.1 CDS tbpA NC_006155.1 792494 793486 R part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit complement(792494..793486) Yersinia pseudotuberculosis IP 32953 2956671 YP_069206.1 CDS YPTB0664 NC_006155.1 794132 795634 D . This gene has not been found in the Yersinia pestis CO92 genome; hypothetical protein 794132..795634 Yersinia pseudotuberculosis IP 32953 2953331 YP_069207.1 CDS YPTB0666 NC_006155.1 796037 796414 R similar to Yersinia pestis YPCD1.89 YPCD1.89 (65.4% evalue=6.E-35); Salmonella typhimurium STM2764 integrase core domain (84.4% evalue=1.E-51); IS1400 transposase B complement(796037..796414) Yersinia pseudotuberculosis IP 32953 2953333 YP_069208.1 CDS yabN NC_006155.1 796557 798218 R activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR complement(796557..798218) Yersinia pseudotuberculosis IP 32953 2956918 YP_069209.1 CDS setA NC_006155.1 798864 800045 D similar to Escherichia coli b0070 yabM; sugar efflux transporter A (70.6% evalue=1.E-154); Escherichia coli JW0069 yabM, leuD; Sugar efflux protein (70.9% evalue=1.E-154); major facilitator superfamily transporter sugar efflux pump 798864..800045 Yersinia pseudotuberculosis IP 32953 2956598 YP_069210.1 CDS leuD NC_006155.1 800323 800925 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(800323..800925) Yersinia pseudotuberculosis IP 32953 2955942 YP_069211.1 CDS leuC NC_006155.1 800940 802370 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(800940..802370) Yersinia pseudotuberculosis IP 32953 2955941 YP_069212.2 CDS leuB NC_006155.1 802372 803463 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(802372..803463) Yersinia pseudotuberculosis IP 32953 2955940 YP_069213.1 CDS leuA NC_006155.1 803466 805028 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(803466..805028) Yersinia pseudotuberculosis IP 32953 2955939 YP_069214.1 CDS leuO NC_006155.1 806244 807200 D activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 806244..807200 Yersinia pseudotuberculosis IP 32953 2955943 YP_069215.1 CDS YPTB0674 NC_006155.1 807753 809558 D similar to Yersinia pestis YPO0537 AMP-binding enzyme-family protein (100% evalue=0); Vibrio cholerae VC2484 long-chain-fatty-acid--CoA ligase, (56.3% evalue=0); AMP-binding protein 807753..809558 Yersinia pseudotuberculosis IP 32953 2953334 YP_069216.1 CDS ilvI NC_006155.1 810018 811745 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 810018..811745 Yersinia pseudotuberculosis IP 32953 2955877 YP_069217.1 CDS ilvH NC_006155.1 811748 812242 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 811748..812242 Yersinia pseudotuberculosis IP 32953 2955876 YP_069218.1 CDS fruR NC_006155.1 812710 813720 D binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 812710..813720 Yersinia pseudotuberculosis IP 32953 2955646 YP_069219.1 CDS ygaW NC_006155.1 813851 814291 R similar to Yersinia pestis YPO0544 membrane protein (100% evalue=1.E-79); Salmonella typhimurium STM2800 inner membrane protein (65.5% evalue=2.E-49); hypothetical protein complement(813851..814291) Yersinia pseudotuberculosis IP 32953 2957042 YP_069220.1 CDS mraZ NC_006155.1 815393 815851 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 815393..815851 Yersinia pseudotuberculosis IP 32953 2956076 YP_069221.1 CDS mraW NC_006155.1 815854 816816 D similar to Yersinia pestis YPO0547 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0080 yabC; Hypothetical protein (ORFB) (77.1% evalue=1.E-136); S-adenosyl-methyltransferase MraW 815854..816816 Yersinia pseudotuberculosis IP 32953 2956074 YP_069222.1 CDS ftsL NC_006155.1 816813 817130 D membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 816813..817130 Yersinia pseudotuberculosis IP 32953 2955657 YP_069223.1 CDS ftsI NC_006155.1 817196 818959 D similar to Yersinia pestis YPO0549 ftsI, pbpB; penicillin-binding protein 3 (99.8% evalue=0); Escherichia coli ECs0088 septum formation protein FtsI (84.7% evalue=0); division specific transpeptidase, penicillin-binding protein 3 817196..818959 Yersinia pseudotuberculosis IP 32953 2955654 YP_069224.1 CDS murE NC_006155.1 818961 820433 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 818961..820433 Yersinia pseudotuberculosis IP 32953 2956102 YP_069225.1 CDS murF NC_006155.1 820430 821806 D deleted EC_number 6.3.2.15; similar to Yersinia pestis YPO0551 murF, mra; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligase (99.7% evalue=0); Escherichia coli b0086 murF, mra (69.6% evalue=1.E-175); UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 820430..821806 Yersinia pseudotuberculosis IP 32953 2956103 YP_069226.1 CDS mraY NC_006155.1 821800 822882 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 821800..822882 Yersinia pseudotuberculosis IP 32953 2956075 YP_069227.1 CDS murD NC_006155.1 822885 824201 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 822885..824201 Yersinia pseudotuberculosis IP 32953 2956101 YP_069228.1 CDS ftsW NC_006155.1 824201 825403 D integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 824201..825403 Yersinia pseudotuberculosis IP 32953 2955660 YP_069229.1 CDS murG NC_006155.1 825400 826470 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 825400..826470 Yersinia pseudotuberculosis IP 32953 2956104 YP_069230.1 CDS murC NC_006155.1 826608 828083 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 826608..828083 Yersinia pseudotuberculosis IP 32953 2956100 YP_069231.1 CDS ddl NC_006155.1 828076 828996 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 828076..828996 Yersinia pseudotuberculosis IP 32953 2955442 YP_069232.1 CDS ftsQ NC_006155.1 828998 829825 D involved in septum formation; cell division protein FtsQ 828998..829825 Yersinia pseudotuberculosis IP 32953 2955659 YP_069233.1 CDS ftsA NC_006155.1 829852 831108 D ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 829852..831108 Yersinia pseudotuberculosis IP 32953 2955651 YP_069234.1 CDS ftsZ NC_006155.1 831181 832332 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 831181..832332 Yersinia pseudotuberculosis IP 32953 2955663 YP_069235.1 CDS lpxC NC_006155.1 832429 833352 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 832429..833352 Yersinia pseudotuberculosis IP 32953 2955968 YP_069236.1 CDS YPTB0695 NC_006155.1 833519 834049 R similar to Yersinia pestis YPO0562 conserved hypothetical protein (100% evalue=1.E-92); Vibrio cholerae VC2395 hypothetical protein (34.1% evalue=1.E-14); hypothetical protein complement(833519..834049) Yersinia pseudotuberculosis IP 32953 2953335 YP_069237.2 CDS secM NC_006155.1 834072 834605 D secM translational pause allows for the initiation of secA translation; SecA regulator SecM 834072..834605 Yersinia pseudotuberculosis IP 32953 2956587 YP_069238.1 CDS secA NC_006155.1 834683 837397 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 834683..837397 Yersinia pseudotuberculosis IP 32953 2956581 YP_069239.1 CDS mutT NC_006155.1 837692 838078 D similar to Yersinia pestis YPO0565 mutT; mutator protein MutT (100% evalue=1.E-69); Salmonella typhimurium STM0137 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP (65% evalue=6.E-40); nucleoside triphosphate pyrophosphohydrolase 837692..838078 Yersinia pseudotuberculosis IP 32953 2956110 YP_069240.1 CDS tnpA NC_006155.1 838293 838751 D similar to Yersinia pestis YPO3968 tnp; transposase for the IS1541 insertion element (100% evalue=1.E-88); transposase 838293..838751 Yersinia pseudotuberculosis IP 32953 2956714 YP_069241.1 CDS yacG NC_006155.1 838941 839147 R similar to Yersinia pestis YPO3432 conserved hypothetical protein (100% evalue=2.E-37); Escherichia coli ECs0105 hypothetical protein (80.3% evalue=4.E-25); zinc-binding protein complement(838941..839147) Yersinia pseudotuberculosis IP 32953 2956921 YP_069242.1 CDS yacF NC_006155.1 839355 840107 R similar to Yersinia pestis YPO3431 conserved hypothetical protein (100% evalue=1.E-140); Salmonella typhi STY0161 yacF; conserved hypothetical protein (69.9% evalue=2.E-95); hypothetical protein complement(839355..840107) Yersinia pseudotuberculosis IP 32953 2956920 YP_069243.1 CDS coaE NC_006155.1 840104 840724 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(840104..840724) Yersinia pseudotuberculosis IP 32953 2955345 YP_069244.1 CDS guaC NC_006155.1 841020 842063 D catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 841020..842063 Yersinia pseudotuberculosis IP 32953 2955764 YP_069245.1 CDS YPTB0704 NC_006155.1 842257 843465 D similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 842257..843465 Yersinia pseudotuberculosis IP 32953 2953336 YP_069246.1 CDS hofC NC_006155.1 843886 845085 R similar to Yersinia pestis YPO3427 hofC, hopC; type II secretion system protein (99.4% evalue=0); Salmonella typhimurium STM0142 hofC; component in type IV pilin biogenesis (38.4% evalue=8.E-77); type IV pilin biogenesis protein complement(843886..845085) Yersinia pseudotuberculosis IP 32953 2955817 YP_069247.1 CDS hofB NC_006155.1 845082 846620 R similar to Yersinia pestis YPO3426 hofB, hopB; type II secretion system protein (99.8% evalue=0); Escherichia coli Z0117 hofB; integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake (45.3% evalue=1.E-112); hypothetical protein complement(845082..846620) Yersinia pseudotuberculosis IP 32953 2955816 YP_069248.1 CDS ppdD NC_006155.1 846613 847077 R similar to Yersinia pestis YPO3425 ppdD; prepilin peptidase dependent protein D precursor (100% evalue=9.E-83); Escherichia coli Z0118 ppdD; prelipin peptidase dependent protein (57.4% evalue=4.E-42); major pilin subunit complement(846613..847077) Yersinia pseudotuberculosis IP 32953 2956305 YP_069249.1 CDS nadC NC_006155.1 847280 848188 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase complement(847280..848188) Yersinia pseudotuberculosis IP 32953 2956115 YP_069250.1 CDS ampD NC_006155.1 848301 848852 D similar to Yersinia pestis YPO3423 ampD; signalling protein in beta-lactamase regulation (100% evalue=1.E-105); Escherichia coli b0110 ampD; ampD protein (65% evalue=1.E-68); N-acetyl-anhydromuranmyl-L-alanine amidase 848301..848852 Yersinia pseudotuberculosis IP 32953 2955189 YP_069251.1 CDS ampE NC_006155.1 849125 849979 D involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 849125..849979 Yersinia pseudotuberculosis IP 32953 2955190 YP_069252.1 CDS aroP NC_006155.1 850381 851778 R similar to Yersinia pestis YPO3421 aroP; aromatic amino acid transport protein (99.7% evalue=0); amino acid APC transporter complement(850381..851778) Yersinia pseudotuberculosis IP 32953 2955230 YP_069253.1 CDS pdhR NC_006155.1 852641 853405 D activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 852641..853405 Yersinia pseudotuberculosis IP 32953 2956221 YP_069254.1 CDS aceE NC_006155.1 853601 856264 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 853601..856264 Yersinia pseudotuberculosis IP 32953 2955161 YP_069255.1 CDS aceF NC_006155.1 856278 857852 D similar to Yersinia pestis YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (96.7% evalue=0); Escherichia coli JW0111 aceF; Dihydrolipoamide S-acetyltransferase (81.1% evalue=0); dihydrolipoamide acetyltransferase 856278..857852 Yersinia pseudotuberculosis IP 32953 2955162 YP_069256.1 CDS lpdA NC_006155.1 858155 859582 D E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 858155..859582 Yersinia pseudotuberculosis IP 32953 2955963 YP_069257.1 CDS acnB NC_006155.1 860142 862739 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 860142..862739 Yersinia pseudotuberculosis IP 32953 2955166 YP_069258.1 CDS YPTB0717 NC_006155.1 863038 863397 D similar to Yersinia pestis YPO3414 conserved hypothetical protein (100% evalue=6.E-67); Salmonella typhi STY0182 conserved hypothetical protein (69.7% evalue=1.E-47); hypothetical protein 863038..863397 Yersinia pseudotuberculosis IP 32953 2953337 YP_069259.1 CDS yddG NC_006155.1 863522 864409 R similar to Yersinia pestis YPO3413 yddG; membrane protein (97.3% evalue=1.E-168); Escherichia coli ECs2077 hypothetical protein (42.1% evalue=2.E-63); hypothetical protein complement(863522..864409) Yersinia pseudotuberculosis IP 32953 2956987 YP_069260.1 CDS speD NC_006155.1 864847 865641 R S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase complement(864847..865641) Yersinia pseudotuberculosis IP 32953 2956625 YP_069261.1 CDS speE NC_006155.1 865719 866609 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(865719..866609) Yersinia pseudotuberculosis IP 32953 2956626 YP_069262.1 CDS yacC NC_006155.1 866726 867073 R similar to Yersinia pestis YPO3410 yacC; exported protein (100% evalue=3.E-61); Escherichia coli ECs0126 hypothetical protein (71.1% evalue=2.E-40); hypothetical protein complement(866726..867073) Yersinia pseudotuberculosis IP 32953 2956919 YP_069263.1 CDS yacK NC_006155.1 867390 868991 D laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 867390..868991 Yersinia pseudotuberculosis IP 32953 2956922 YP_069264.1 CDS hpt NC_006155.1 869211 869747 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 869211..869747 Yersinia pseudotuberculosis IP 32953 2955833 YP_069265.1 CDS yadF NC_006155.1 870055 870717 R similar to Yersinia pestis YPO3407 yadF; carbonic anhydrase (100% evalue=1.E-127); Escherichia coli b0126 yadF; carbonic anhydrase (73.1% evalue=3.E-93); carbonic anhydrase complement(870055..870717) Yersinia pseudotuberculosis IP 32953 2956925 YP_069266.1 CDS yadG NC_006155.1 870953 871879 D similar to Yersinia pestis YPO3406 yadG; ABC transporter, ATP-binding protein (99.6% evalue=1.E-171); Salmonella typhimurium STM0172 yadG; ABC-type multidrug transport system, ATPase component (82.4% evalue=1.E-142); drug efflux ABC transporter ATP-binding protein 870953..871879 Yersinia pseudotuberculosis IP 32953 2956926 YP_069267.1 CDS yadH NC_006155.1 871876 872646 D similar to Yersinia pestis YPO3405 yadH; ABC transporter, integral membrane protein (100% evalue=1.E-144); Salmonella typhimurium STM0173 yadH; ABC superfamily (membrane) transport protein (80% evalue=1.E-118); drug efflux ABC transporter permease 871876..872646 Yersinia pseudotuberculosis IP 32953 2956927 YP_069268.1 CDS yadE NC_006155.1 872968 874161 D similar to Yersinia pestis YPO3404 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0179 yadE; xylanase/chitin deacetylase (65.7% evalue=1.E-150); hypothetical protein 872968..874161 Yersinia pseudotuberculosis IP 32953 2956924 YP_069269.1 CDS panD NC_006155.1 874325 874705 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(874325..874705) Yersinia pseudotuberculosis IP 32953 2956209 YP_069270.1 CDS panC NC_006155.1 875116 875970 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(875116..875970) Yersinia pseudotuberculosis IP 32953 2956208 YP_069271.1 CDS panB NC_006155.1 876058 876858 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(876058..876858) Yersinia pseudotuberculosis IP 32953 2956207 YP_069272.1 CDS folK NC_006155.1 877124 877603 R similar to Yersinia pestis YPO3400 folK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (100% evalue=4.E-88); Salmonella typhimurium STM0183 folK; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, PPPK (70.9% evalue=1.E-55); 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(877124..877603) Yersinia pseudotuberculosis IP 32953 2955635 YP_069273.2 CDS pcnB NC_006155.1 877611 879077 R Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase complement(877611..879077) Yersinia pseudotuberculosis IP 32953 2956218 YP_069274.1 CDS yadB NC_006155.1 879166 880161 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(879166..880161) Yersinia pseudotuberculosis IP 32953 2956923 YP_069275.1 CDS dksA NC_006155.1 880441 880896 R similar to Yersinia pestis YPO3397 dksA; DnaK suppressor protein homologue (100% evalue=1.E-82); Salmonella typhi STY0211 dksA; dosage-dependent dnaK suppressor protein (96% evalue=2.E-79); RNA polymerase-binding transcription factor complement(880441..880896) Yersinia pseudotuberculosis IP 32953 2955462 YP_069276.1 CDS sfsA NC_006155.1 881066 881824 R Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A complement(881066..881824) Yersinia pseudotuberculosis IP 32953 2956600 YP_069277.1 CDS ligT NC_006155.1 881937 882512 R similar to Yersinia pestis YPO3395 ligT; 2'-5' RNA ligase (99.4% evalue=1.E-108); Escherichia coli JW0143 ligT; 2'-5' RNA ligase (58.1% evalue=5.E-56); 2'-5' RNA ligase complement(881937..882512) Yersinia pseudotuberculosis IP 32953 2955948 YP_069278.2 CDS hrp NC_006155.1 882556 885156 D similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 882556..885156 Yersinia pseudotuberculosis IP 32953 2955834 YP_069279.1 CDS mrcB NC_006155.1 885265 887745 D bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 885265..887745 Yersinia pseudotuberculosis IP 32953 2956078 YP_069280.1 CDS fhuC NC_006155.1 888067 888861 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 888067..888861 Yersinia pseudotuberculosis IP 32953 2955548 YP_069281.2 CDS fhuD NC_006155.1 888861 889913 D Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 888861..889913 Yersinia pseudotuberculosis IP 32953 2955549 YP_069282.1 CDS fhuB NC_006155.1 889910 891907 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 889910..891907 Yersinia pseudotuberculosis IP 32953 2955547 YP_069283.1 CDS hemL NC_006155.1 892281 893561 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(892281..893561) Yersinia pseudotuberculosis IP 32953 2955781 YP_069284.2 CDS yadQ NC_006155.1 893942 895378 D Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 893942..895378 Yersinia pseudotuberculosis IP 32953 2956928 YP_069285.1 CDS yadR NC_006155.1 895514 895858 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 895514..895858 Yersinia pseudotuberculosis IP 32953 2956929 YP_069286.1 CDS yadS NC_006155.1 896143 896757 R similar to Yersinia pestis YPO3386 yadS; membrane protein (100% evalue=1.E-112); Salmonella typhimurium STM0205 yadS; inner membrane protein (87.1% evalue=1.E-98); hypothetical protein complement(896143..896757) Yersinia pseudotuberculosis IP 32953 2956930 YP_069287.1 CDS yadT NC_006155.1 896757 897599 R solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF complement(896757..897599) Yersinia pseudotuberculosis IP 32953 2956931 YP_069288.1 CDS mtn NC_006155.1 897599 898300 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(897599..898300) Yersinia pseudotuberculosis IP 32953 2956093 YP_069289.1 CDS dgt NC_006155.1 898611 900131 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 898611..900131 Yersinia pseudotuberculosis IP 32953 2955457 YP_069290.1 CDS htrA NC_006155.1 900329 901774 D protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 900329..901774 Yersinia pseudotuberculosis IP 32953 2955846 YP_069291.1 CDS barA NC_006155.1 901933 904761 R part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA complement(901933..904761) Yersinia pseudotuberculosis IP 32953 2955271 YP_069292.1 CDS relA NC_006155.1 905205 907439 D (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 905205..907439 Yersinia pseudotuberculosis IP 32953 2956423 YP_069293.1 CDS YPTB0752 NC_006155.1 907489 907653 D similar to Yersinia pestis YPO3379 hypothetical protein.; hypothetical protein 907489..907653 Yersinia pseudotuberculosis IP 32953 2953338 YP_069294.1 CDS mazG NC_006155.1 907660 908502 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 907660..908502 Yersinia pseudotuberculosis IP 32953 2956003 YP_069295.1 CDS pyrG NC_006155.1 908714 910351 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 908714..910351 Yersinia pseudotuberculosis IP 32953 2956389 YP_069296.1 CDS eno NC_006155.1 910432 911727 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 910432..911727 Yersinia pseudotuberculosis IP 32953 2955507 YP_069297.1 CDS sodC NC_006155.1 912099 912668 D similar to Yersinia pestis YPO3375 sodC; superoxide dismutase [Cu-Zn] precursor (94% evalue=1.E-105); Salmonella typhimurium STM1044 sodC; Gifsy-2 prophage: superoxide dismutase precursor (Cu-Zn) (72.2% evalue=3.E-71); superoxide dismutase (Cu-Zn) 912099..912668 Yersinia pseudotuberculosis IP 32953 2956620 YP_069298.1 CDS ygcF NC_006155.1 912772 913443 D similar to Yersinia pestis YPO3374 conserved hypothetical protein (100% evalue=1.E-128); Salmonella typhi STY3080 conserved hypothetical protein (79.8% evalue=1.E-105); coenzyme PQQ synthesis protein 912772..913443 Yersinia pseudotuberculosis IP 32953 2957047 YP_069299.1 CDS ygcM NC_006155.1 913520 913879 R similar to Yersinia pestis YPO3373 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase family protein (100% evalue=1.E-68); Escherichia coli JW2735 ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (83.1% evalue=3.E-59); 6-pyruvoyl tetrahydrobiopterin synthase complement(913520..913879) Yersinia pseudotuberculosis IP 32953 2957048 YP_069300.1 CDS cysJ NC_006155.1 914272 916128 D catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha 914272..916128 Yersinia pseudotuberculosis IP 32953 2955407 YP_069301.1 CDS cysI NC_006155.1 916128 917858 D hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 916128..917858 Yersinia pseudotuberculosis IP 32953 2955406 YP_069302.1 CDS cysH NC_006155.1 917855 918589 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 917855..918589 Yersinia pseudotuberculosis IP 32953 2955405 YP_069303.1 CDS YPTB0762 NC_006155.1 918832 919239 R similar to Yersinia pestis YPO3369 conserved hypothetical protein (100% evalue=7.E-75); hypothetical protein complement(918832..919239) Yersinia pseudotuberculosis IP 32953 2953339 YP_069304.1 CDS YPTB0763 NC_006155.1 919414 919614 R similar to Yersinia pestis conserved hypothetical protein emb|CAC90635.1| (AJ414150) (122 aa), evalue=2e-05, 39.6% identity in 63 aa, and to Rhizobium meliloti (Sinorhizobium meliloti) hypothetical protein SMC04441 swall|Q92K60| (62 aa), evalue=2e-05, 35.; hypothetical protein complement(919414..919614) Yersinia pseudotuberculosis IP 32953 2953340 YP_069305.1 CDS cysG NC_006155.1 920227 921645 D similar to Yersinia pestis YPO3367 cysG; siroheme synthase (99.5% evalue=0); Neisseria meningitidis NMB1194 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase (60% evalue=1.E-153); siroheme synthase 920227..921645 Yersinia pseudotuberculosis IP 32953 2955403 YP_069306.1 CDS cysD NC_006155.1 921656 922564 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 921656..922564 Yersinia pseudotuberculosis IP 32953 2955401 YP_069307.1 CDS cysN NC_006155.1 922657 924093 D may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 922657..924093 Yersinia pseudotuberculosis IP 32953 2955411 YP_069308.1 CDS cysC NC_006155.1 924095 924736 D converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 924095..924736 Yersinia pseudotuberculosis IP 32953 2955400 YP_069309.1 CDS ygbE NC_006155.1 924927 925244 D similar to Yersinia pestis YPO3363 ygbE; membrane protein (100% evalue=5.E-58); Salmonella typhimurium STM2932 ygbE; inner membrane protein (53.9% evalue=4.E-24); hypothetical protein 924927..925244 Yersinia pseudotuberculosis IP 32953 2957044 YP_069310.1 CDS ftsB NC_006155.1 925561 925881 D forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 925561..925881 Yersinia pseudotuberculosis IP 32953 2957046 YP_069311.1 CDS ispD NC_006155.1 925885 926610 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 925885..926610 Yersinia pseudotuberculosis IP 32953 2955900 YP_069312.1 CDS ispF NC_006155.1 926749 927237 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 926749..927237 Yersinia pseudotuberculosis IP 32953 2955901 YP_069313.1 CDS truD NC_006155.1 927248 928297 D catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 927248..928297 Yersinia pseudotuberculosis IP 32953 2957045 YP_069314.1 CDS surE NC_006155.1 928275 929039 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 928275..929039 Yersinia pseudotuberculosis IP 32953 2956654 YP_069315.1 CDS pcm NC_006155.1 929033 929659 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 929033..929659 Yersinia pseudotuberculosis IP 32953 2956217 YP_069316.1 CDS nlpD NC_006155.1 929763 930764 D outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 929763..930764 Yersinia pseudotuberculosis IP 32953 2956146 YP_069317.1 CDS rpoS NC_006155.1 930819 931817 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 930819..931817 Yersinia pseudotuberculosis IP 32953 2956527 YP_069318.1 CDS tnpA NC_006155.1 932043 933251 R similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase-like protein complement(932043..933251) Yersinia pseudotuberculosis IP 32953 2956715 YP_069319.1 CDS mutS NC_006155.1 933577 936132 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(933577..936132) Yersinia pseudotuberculosis IP 32953 2956109 YP_069320.1 CDS rpiB NC_006155.1 936975 937430 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(936975..937430) Yersinia pseudotuberculosis IP 32953 2956486 YP_069321.1 CDS ydjJ NC_006155.1 937913 939028 D similar to Yersinia pestis YPO3352 ydjJ; Zinc-binding dehydrogenase (100% evalue=0); Zinc-binding dehydrogenase 937913..939028 Yersinia pseudotuberculosis IP 32953 2956996 YP_069322.1 CDS YPTB0781 NC_006155.1 939092 939862 D similar to Yersinia pestis YPO3351 dehydrogenase (100% evalue=1.E-144); Listeria innocua lin0362 similar to dehydrogenase/reductase (54.7% evalue=5.E-78); short chain dehydrogenase 939092..939862 Yersinia pseudotuberculosis IP 32953 2953341 YP_069323.1 CDS YPTB0782 NC_006155.1 939949 940950 D similar to Yersinia pestis YPO3350 dhaK, ycgT; dihydroxyacetone kinase (100% evalue=0); Sinorhizobium meliloti SMb20314 dihydroxyacetone kinase (63.3% evalue=1.E-115); dihydroxyacetone kinase 939949..940950 Yersinia pseudotuberculosis IP 32953 2953342 YP_069324.1 CDS YPTB0783 NC_006155.1 940957 941631 D similar to Yersinia pestis YPO3349 conserved hypothetical protein (99.5% evalue=1.E-122); Sinorhizobium meliloti SMb20313 dihydroxyacetone kinase (57.2% evalue=4.E-59); dihydroxyacetone kinase 940957..941631 Yersinia pseudotuberculosis IP 32953 2953343 YP_069325.1 CDS YPTB0784 NC_006155.1 941752 942711 R similar to Yersinia pestis YPO3348 transcriptional regulatory protein (100% evalue=1.E-179); Pasteurella multocida PM1646 SmoC-like regulatory protein (68.4% evalue=1.E-124); transcriptional regulator complement(941752..942711) Yersinia pseudotuberculosis IP 32953 2953344 YP_069326.1 CDS arsB NC_006155.1 943278 944567 R similar to Yersinia pestis YPO3347 arsB, arsF; arsenical pump membrane protein (99.7% evalue=0); Escherichia coli Z4904 arsB; arsenical pump membrane protein (83.9% evalue=0); arsenical efflux pump/H+ antiporter, arsB complement(943278..944567) Yersinia pseudotuberculosis IP 32953 2955233 YP_069327.1 CDS arsR NC_006155.1 944652 944993 R regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR complement(944652..944993) Yersinia pseudotuberculosis IP 32953 2955234 YP_069328.1 CDS YPTB0787 NC_006155.1 945240 945518 R similar to Yersinia pestis YPO3345 hypothetical protein (98.9% evalue=3.E-48); hypothetical protein complement(945240..945518) Yersinia pseudotuberculosis IP 32953 2953345 YP_069329.1 CDS YPTB0788 NC_006155.1 945714 945920 R similar to Yersinia pestis YPO3344 hypothetical protein. 100% identical; hypothetical protein complement(945714..945920) Yersinia pseudotuberculosis IP 32953 2953346 YP_069330.1 CDS YPTB0789 NC_006155.1 946341 947111 R similar to Yersinia pestis YPO3343 probable extracellular solute-binding protein (99.2% evalue=1.E-142); Pseudomonas aeruginosa PA3475 pheC; cyclohexadienyl dehydratase precursor (prephenate dehydratase / arogenate dehydratase) (38% evalue=1.E-36); amino acid ABC transporter substrate-binding protein complement(946341..947111) Yersinia pseudotuberculosis IP 32953 2953347 YP_069331.1 CDS yhjA NC_006155.1 947176 948555 R similar to Yersinia pestis YPO3342 yhjA; cytochrome C peroxidase (99.5% evalue=0); Escherichia coli b3518 yhjA; probable cytochrome C peroxidase (56.1% evalue=1.E-140); cytochrome C peroxidase complement(947176..948555) Yersinia pseudotuberculosis IP 32953 2957068 YP_069332.1 CDS YPTB0791 NC_006155.1 948792 949046 R hypothetical protein complement(948792..949046) Yersinia pseudotuberculosis IP 32953 2953348 YP_069333.1 CDS YPTB0792 NC_006155.1 949215 951311 D similar to Escherichia coli ECs1360 Iha adhesin (56.2% evalue=0); Escherichia coli Z1617 receptor (56.2% evalue=0); exogenous ferric siderophore receptor; Iha adhesin 949215..951311 Yersinia pseudotuberculosis IP 32953 2953349 YP_069334.1 CDS YPTB0793 NC_006155.1 951753 952940 D similar to Yersinia pestis YPO3339 hypothetical protein (100% evalue=0); hypothetical protein 951753..952940 Yersinia pseudotuberculosis IP 32953 2953350 YP_069335.1 CDS map NC_006155.1 953280 954065 R similar to Yersinia pestis YPO3337 map; methionine aminopeptidase (100% evalue=1.E-150); Xylella fastidiosa XF0111 methionine aminopeptidase (62.6% evalue=1.E-91); methionine aminopeptidase complement(953280..954065) Yersinia pseudotuberculosis IP 32953 2956001 YP_069336.1 CDS YPTB0795 NC_006155.1 954062 954367 R similar to Yersinia pestis YPO3336 conserved hypothetical protein (100% evalue=2.E-41); hypothetical protein complement(954062..954367) Yersinia pseudotuberculosis IP 32953 2953351 YP_069337.1 CDS fumA NC_006155.1 954497 956140 R similar to Yersinia pestis YPO3335 fumA, fumB; fumarate hydratase, class I (100% evalue=0); Escherichia coli JW1604 fumA; fumarate hydratase, class I (86.4% evalue=0); fumarase A (fumarate hydratase class I), aerobic isozyme complement(954497..956140) Yersinia pseudotuberculosis IP 32953 2955664 YP_069338.1 CDS sgbK NC_006155.1 956538 958034 R similar to Yersinia pestis YPO3334 sgbK, lyx, lyxK, xylK; L-xylulose kinase (99.5% evalue=0); Escherichia coli JW3552 lyxK; Cryptic L-xylulose kinase (L-xylulokinase) (42.8% evalue=1.E-114); L-xylulose kinase complement(956538..958034) Yersinia pseudotuberculosis IP 32953 2956606 YP_069339.1 CDS sgbU NC_006155.1 958045 958926 R L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; L-xylulose 5-phosphate 3-epimerase complement(958045..958926) Yersinia pseudotuberculosis IP 32953 2956607 YP_069340.1 CDS YPTB0799 NC_006155.1 959107 960168 R similar to Yersinia pestis YPO3332 sugar ABC transporter, permease (100% evalue=0); Sinorhizobium meliloti SMb20487 sugar ABC transporter permease (49.1% evalue=1.E-75); sugar ABC transporter permease complement(959107..960168) Yersinia pseudotuberculosis IP 32953 2953352 YP_069341.1 CDS YPTB0800 NC_006155.1 960181 961170 R similar to Yersinia pestis YPO3331 sugar ABC transporter, permease (100% evalue=1.E-180); Escherichia coli Z0418 permease component of transport system, probably ribose specific (44.6% evalue=2.E-72); sugar ABC transporter permease complement(960181..961170) Yersinia pseudotuberculosis IP 32953 2953353 YP_069342.1 CDS YPTB0801 NC_006155.1 961163 962677 R similar to Yersinia pestis YPO3634 ABC transporter ATP binding protein (54.3% evalue=1.E-147); sugar ABC transporter ATPase complement(961163..962677) Yersinia pseudotuberculosis IP 32953 2953354 YP_069343.1 CDS YPTB0802 NC_006155.1 962826 963833 R similar to Yersinia pestis YPO3328 sugar ABC transporter, periplasmic protein (99.4% evalue=0); Agrobacterium tumefaciens AGR_L_271 periplasmic binding protein, probable substrate ribose (60.5% evalue=2.E-98); sugar ABC transporter substrate-binding protein complement(962826..963833) Yersinia pseudotuberculosis IP 32953 2953355 YP_069344.1 CDS YPTB0803 NC_006155.1 963991 964800 R similar to Yersinia pestis YPO3327 fucR; deoR-family regulatory protein (99.2% evalue=1.E-150); B. halodurans BH1553 transcriptional regulator (DeoR family) (35.9% evalue=1.E-42); DeoR family transcriptional regulator complement(963991..964800) Yersinia pseudotuberculosis IP 32953 2953356 YP_069345.1 CDS araD NC_006155.1 965521 966216 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 965521..966216 Yersinia pseudotuberculosis IP 32953 2955205 YP_069346.1 CDS dmsA NC_006155.1 966666 969116 D similar to Yersinia pestis YPO3325 dmsA; anaerobic dimethyl sulfoxide reductase chain A (99.8% evalue=0); Salmonella typhimurium STM0964 dmsA; anaerobic dimethyl sulfoxide reductase, subunit A (80.3% evalue=0); anaerobic dimethyl sulfoxide reductase subunit A 966666..969116 Yersinia pseudotuberculosis IP 32953 2955465 YP_069347.1 CDS dmsB NC_006155.1 969128 969745 D similar to Yersinia pestis YPO3324 dmsB; anaerobic dimethyl sulfoxide reductase chain B (99.5% evalue=1.E-126); Salmonella typhimurium STM0965 dmsB; anaerobic dimethyl sulfoxide reductase, subunit B (85.8% evalue=1.E-112); anaerobic dimethyl sulfoxide reductase subunit B 969128..969745 Yersinia pseudotuberculosis IP 32953 2955466 YP_069348.1 CDS dmsC NC_006155.1 969747 970607 D similar to Yersinia pestis YPO3323 dmsC; anaerobic dimethyl sulfoxide reductase chain C (99.6% evalue=1.E-160); Salmonella typhimurium STM0966 dmsC; anaerobic dimethyl sulfoxide reductase, subunit C (67% evalue=1.E-106); anaerobic dimethyl sulfoxide reductase subunit C 969747..970607 Yersinia pseudotuberculosis IP 32953 2955468 YP_069349.1 CDS YPTB0808 NC_006155.1 970753 971463 D binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD 970753..971463 Yersinia pseudotuberculosis IP 32953 2953357 YP_069350.1 CDS cybB NC_006155.1 971721 972251 R B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; cytochrome b561 complement(971721..972251) Yersinia pseudotuberculosis IP 32953 2955386 YP_069351.1 CDS cybC NC_006155.1 972398 972781 R similar to Yersinia pestis YPO3320 cybC; cytochrome B562 (98.4% evalue=5.E-66); Salmonella typhi STY4778 cybC; soluble cytochrome b562 (52.3% evalue=1.E-29); cytochrome b(562) complement(972398..972781) Yersinia pseudotuberculosis IP 32953 2955387 YP_069352.1 CDS katY NC_006155.1 972857 975070 R similar to Yersinia pestis YPO3319 katY; catalase-peroxidase (100% evalue=0); Sinorhizobium meliloti SMa2379 catalase/peroxidase (61.1% evalue=0); catalase complement(972857..975070) Yersinia pseudotuberculosis IP 32953 2955908 YP_069353.1 CDS YPTB0812 NC_006155.1 975606 976547 D similar to Yersinia pestis YPO3318 sugar ABC transporter, periplasmic protein (99.6% evalue=1.E-173); Sinorhizobium meliloti SMb20349 probable ABC transporter sugar-binding protein (72.1% evalue=1.E-118); sugar ABC transporter substrate-binding protein 975606..976547 Yersinia pseudotuberculosis IP 32953 2953358 YP_069354.1 CDS YPTB0813 NC_006155.1 976640 977257 D similar to Yersinia pestis YPO3317 lipoprotein (100% evalue=1.E-111); Mesorhizobium loti mll7013 hypothetical protein (34.1% evalue=8.E-16); hypothetical protein 976640..977257 Yersinia pseudotuberculosis IP 32953 2953359 YP_069355.1 CDS YPTB0814 NC_006155.1 977257 978780 D similar to Yersinia pestis YPO3316 sugar ABC transporter, ATP-binding protein (99.6% evalue=0); Mesorhizobium loti mll7012 ribose ABC transporter, ATP-binding protein (54.2% evalue=1.E-144); sugar ABC transporter ATPase 977257..978780 Yersinia pseudotuberculosis IP 32953 2953360 YP_069356.1 CDS YPTB0815 NC_006155.1 978777 979904 D similar to Yersinia pestis YPO3315 rbsC; sugar ABC transporter, permease (98.1% evalue=0); Sinorhizobium meliloti SMb20352 probable sugar ABC transporter permease (59.8% evalue=1.E-120); sugar ABC transporter permease 978777..979904 Yersinia pseudotuberculosis IP 32953 2953361 YP_069357.1 CDS YPTB0816 NC_006155.1 980123 980953 D similar to Yersinia pestis YPO3314 N-terminal region of transketolase (100% evalue=1.E-159); Listeria monocytogenes lmo1032 transketolase (45.1% evalue=2.E-61); hypothetical protein 980123..980953 Yersinia pseudotuberculosis IP 32953 2953362 YP_069358.1 CDS YPTB0817 NC_006155.1 980946 981890 D similar to Yersinia pestis YPO3313 C-terminal region of transketolase (100% evalue=1.E-177); Listeria monocytogenes lmo1033 similar to transketolase (40.5% evalue=3.E-56); C-terminal region of transketolase 980946..981890 Yersinia pseudotuberculosis IP 32953 2953363 YP_069359.1 CDS YPTB0818 NC_006155.1 981893 983380 D similar to Yersinia pestis YPO3312 glycerol kinase (99.7% evalue=0); Agrobacterium tumefaciens Atu1903 glpK; glycerol kinase (44.3% evalue=1.E-108); glycerol kinase 2 981893..983380 Yersinia pseudotuberculosis IP 32953 2953364 YP_069360.1 CDS YPTB0819 NC_006155.1 983401 984825 D similar to Yersinia pestis YPO3311 conserved hypothetical protein (99.3% evalue=0); Thermotoga maritima TM0951 hypothetical protein (51.5% evalue=1.E-134); hypothetical protein 983401..984825 Yersinia pseudotuberculosis IP 32953 2953365 YP_069361.1 CDS YPTB0820 NC_006155.1 985047 985991 R similar to Yersinia pestis YPO3310 transcriptional regulatory protein (100% evalue=1.E-173); Agrobacterium tumefaciens AGR_C_3494 transcriptional regulator (40.5% evalue=2.E-63); transcriptional regulator complement(985047..985991) Yersinia pseudotuberculosis IP 32953 2953366 YP_069362.1 CDS YPTB0821 NC_006155.1 986239 987579 R similar to Yersinia pestis YPO3309 membrane protein (99.5% evalue=0); Pseudomonas aeruginosa PA3355 hypothetical protein (56% evalue=1.E-132); MFS transporter complement(986239..987579) Yersinia pseudotuberculosis IP 32953 2953367 YP_069363.1 CDS ygaD NC_006155.1 987896 988384 D similar to Yersinia pestis YPO3308 competence-damaged protein (100% evalue=3.E-88); Escherichia coli JW2670 ygaD; Hypothetical protein (66.6% evalue=3.E-55); competence damage-inducible protein A 987896..988384 Yersinia pseudotuberculosis IP 32953 2957040 YP_069364.1 CDS recA NC_006155.1 988499 989569 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 988499..989569 Yersinia pseudotuberculosis IP 32953 2956412 YP_069365.1 CDS recX NC_006155.1 989955 990503 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 989955..990503 Yersinia pseudotuberculosis IP 32953 2956422 YP_069366.1 CDS alaS NC_006155.1 990643 993270 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 990643..993270 Yersinia pseudotuberculosis IP 32953 2955183 YP_069367.1 CDS csrA NC_006155.1 993520 993705 D affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 993520..993705 Yersinia pseudotuberculosis IP 32953 2955375 YP_069368.1 CDS yqaB NC_006155.1 995005 995571 D YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 995005..995571 Yersinia pseudotuberculosis IP 32953 2957111 YP_069369.1 CDS yqaA NC_006155.1 995568 995996 D similar to Yersinia pestis YPO3302 yqaA; membrane protein (99.2% evalue=7.E-76); Salmonella typhimurium STM2819 yqaA; inner membrane protein (58.1% evalue=7.E-46); hypothetical protein 995568..995996 Yersinia pseudotuberculosis IP 32953 2957110 YP_069370.1 CDS gshA NC_006155.1 996079 997638 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 996079..997638 Yersinia pseudotuberculosis IP 32953 2955750 YP_069371.1 CDS luxS NC_006155.1 997806 998321 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 997806..998321 Yersinia pseudotuberculosis IP 32953 2955974 YP_069372.2 CDS yfjD NC_006155.1 998410 999600 R similar to Yersinia pestis YPO3298 yfjD; membrane protein (99.2% evalue=0); Escherichia coli JW2593 yfjD; Hypothetical protein (77.3% evalue=0); hypothetical protein complement(998410..999600) Yersinia pseudotuberculosis IP 32953 2957038 YP_069373.1 CDS ypjD NC_006155.1 999762 1000655 R similar to Yersinia pestis YPO3297 corE; membrane protein (99.6% evalue=1.E-166); Escherichia coli ECs3474 hypothetical protein (74.8% evalue=1.E-114); hypothetical protein complement(999762..1000655) Yersinia pseudotuberculosis IP 32953 2957104 YP_069374.1 CDS ffh NC_006155.1 1000719 1002080 D with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1000719..1002080 Yersinia pseudotuberculosis IP 32953 2955545 YP_069375.1 CDS rpsP NC_006155.1 1002308 1002556 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1002308..1002556 Yersinia pseudotuberculosis IP 32953 2956543 YP_069376.1 CDS rimM NC_006155.1 1002578 1003126 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1002578..1003126 Yersinia pseudotuberculosis IP 32953 2956458 YP_069377.1 CDS trmD NC_006155.1 1003165 1003905 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1003165..1003905 Yersinia pseudotuberculosis IP 32953 2956736 YP_069378.1 CDS rplS NC_006155.1 1003986 1004333 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1003986..1004333 Yersinia pseudotuberculosis IP 32953 2956503 YP_069379.1 CDS ydiY NC_006155.1 1004596 1005363 R similar to Yersinia pestis YPO3290 ydiY; exported protein (100% evalue=1.E-145); Escherichia coli ECs2428 hypothetical protein (54% evalue=6.E-77); hypothetical protein complement(1004596..1005363) Yersinia pseudotuberculosis IP 32953 2956995 YP_069380.1 CDS dcuB NC_006155.1 1005686 1007029 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter complement(1005686..1007029) Yersinia pseudotuberculosis IP 32953 2955436 YP_069381.1 CDS YPTB0840 NC_006155.1 1007462 1008178 R unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT complement(1007462..1008178) Yersinia pseudotuberculosis IP 32953 2953368 YP_069382.1 CDS aroF NC_006155.1 1008411 1009481 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1008411..1009481 Yersinia pseudotuberculosis IP 32953 2955225 YP_069383.1 CDS tyrA NC_006155.1 1009494 1010615 D catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1009494..1010615 Yersinia pseudotuberculosis IP 32953 2956845 YP_069384.1 CDS pheA NC_006155.1 1010720 1011877 R catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase complement(1010720..1011877) Yersinia pseudotuberculosis IP 32953 2956248 YP_069385.1 CDS yfiA NC_006155.1 1012239 1012601 R similar to Yersinia pestis YPO3279 yfiA; sigma 54 modulation protein (100% evalue=9.E-63); Escherichia coli Z3890 yfiA; yhbH sigma 54 modulator (79.6% evalue=6.E-46); sigma 54 modulation protein complement(1012239..1012601) Yersinia pseudotuberculosis IP 32953 2957031 YP_069386.1 CDS yfiO NC_006155.1 1012956 1013687 R with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO complement(1012956..1013687) Yersinia pseudotuberculosis IP 32953 2957035 YP_069387.1 CDS rluD NC_006155.1 1013823 1014800 D responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 1013823..1014800 Yersinia pseudotuberculosis IP 32953 2956464 YP_069388.1 CDS yfiH NC_006155.1 1014802 1015533 D similar to Yersinia pestis YPO3276 conserved hypothetical protein (99.5% evalue=1.E-138); Escherichia coli ECs3456 hypothetical protein (62.1% evalue=2.E-85); hypothetical protein 1014802..1015533 Yersinia pseudotuberculosis IP 32953 2957033 YP_069389.1 CDS clpB NC_006155.1 1015663 1018236 D similar to Yersinia pestis YPO3275 clpB, htpM; Clp ATPase (99.8% evalue=0); Escherichia coli JW2573 clpB; ClpB protein (heat shock protein f84.1) (86.6% evalue=0); protein disaggregation chaperone 1015663..1018236 Yersinia pseudotuberculosis IP 32953 2955334 YP_069390.1 CDS yfiM NC_006155.1 1024406 1024747 R similar to Yersinia pestis YPO3274 lipoprotein (100% evalue=2.E-63); Salmonella typhimurium STM2653 yfiM; outer membrane lipoprotein (55.7% evalue=7.E-31); hypothetical protein complement(1024406..1024747) Yersinia pseudotuberculosis IP 32953 2957034 YP_069391.1 CDS pssA NC_006155.1 1024809 1026167 R catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase complement(1024809..1026167) Yersinia pseudotuberculosis IP 32953 2956346 YP_069392.1 CDS yfiQ NC_006155.1 1026340 1028982 R similar to Yersinia pestis YPO3272 yfiQ; acetyltransferase (99.6% evalue=0); Escherichia coli Z3869 yfiQ; orf, hypothetical protein (75.6% evalue=0); acyl-CoA synthetase complement(1026340..1028982) Yersinia pseudotuberculosis IP 32953 2957037 YP_069393.1 CDS yfiP NC_006155.1 1029025 1029774 R similar to Yersinia pestis YPO3271 conserved hypothetical protein (98.7% evalue=1.E-143); Escherichia coli b2583 yfiP; hypothetical 27.0 kD protein in ung-pssA intergenic region (60.8% evalue=3.E-75); hypothetical protein complement(1029025..1029774) Yersinia pseudotuberculosis IP 32953 2957036 YP_069394.1 CDS trxC NC_006155.1 1029945 1030382 R similar to Yersinia pestis YPO3270 trxC; thioredoxin 2 (97.9% evalue=3.E-81); Escherichia coli Z3867 trxC; thioredoxin-like protein (76.9% evalue=4.E-63); thioredoxin complement(1029945..1030382) Yersinia pseudotuberculosis IP 32953 2956838 YP_069395.1 CDS yfiF NC_006155.1 1030634 1031806 D similar to Yersinia pestis YPO3269 yfiF; tRNA/rRNA methyltransferase (99.2% evalue=0); Salmonella typhimurium STM2648 yfiF; tRNA/rRNA methyltransferase (60% evalue=1.E-123); methyltransferase 1030634..1031806 Yersinia pseudotuberculosis IP 32953 2957032 YP_069396.1 CDS emrB NC_006155.1 1031939 1033474 R similar to Yersinia pestis YPO3268 emrB; multidrug resistance protein B (99.8% evalue=0); Escherichia coli JW2661 emrB; Multidrug resistant protein EmrB (84% evalue=0); MFS multidrug efflux pump, emrB subunit complement(1031939..1033474) Yersinia pseudotuberculosis IP 32953 2955503 YP_069397.1 CDS emrA NC_006155.1 1033513 1034685 R similar to Yersinia pestis YPO3267 emrA; multidrug resistance protein A (100% evalue=0); Salmonella typhi STY2940 emrA; multidrug resistance protein A (71.4% evalue=1.E-157); multidrug efflux pump membrane fusion subunit EmrA complement(1033513..1034685) Yersinia pseudotuberculosis IP 32953 2955502 YP_069398.1 CDS emrR NC_006155.1 1035069 1035581 R DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA complement(1035069..1035581) Yersinia pseudotuberculosis IP 32953 2955504 YP_069399.1 CDS ygaH NC_006155.1 1035753 1036094 R similar to Yersinia pestis YPO3265 membrane protein (99.1% evalue=2.E-59); Escherichia coli JW2658 ygaH; Hypothetical protein (55.2% evalue=3.E-28); hypothetical protein complement(1035753..1036094) Yersinia pseudotuberculosis IP 32953 2957041 YP_069400.1 CDS ygaZ NC_006155.1 1036091 1036864 R similar to Yersinia pestis YPO3264 amino acid transporter (99.2% evalue=1.E-141); Escherichia coli Z3983 hypothetical protein (71.3% evalue=1.E-92); LIV-E family branched chain amino acid exporter large subunit complement(1036091..1036864) Yersinia pseudotuberculosis IP 32953 2957043 YP_069401.1 CDS YPTB0860 NC_006155.1 1037024 1038223 R similar to Yersinia pestis YPO3263 probable sugar transporter (99.7% evalue=0); Salmonella typhi STY2938 transmembrane transport protein (75.3% evalue=1.E-162); MFS sugar/multidrug efflux antiporter complement(1037024..1038223) Yersinia pseudotuberculosis IP 32953 2953369 YP_069402.1 CDS YPTB0861 NC_006155.1 1038447 1038914 R similar to Yersinia pestis YPO3262 hypothetical protein (98.7% evalue=1.E-84); Caulobacter crescentus CC2614 hypothetical protein (47.9% evalue=8.E-26); hypothetical protein complement(1038447..1038914) Yersinia pseudotuberculosis IP 32953 2953370 YP_069403.1 CDS YPTB0862 NC_006155.1 1038943 1040340 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(1038943..1040340) Yersinia pseudotuberculosis IP 32953 2953371 YP_069404.1 CDS YPTB0863 NC_006155.1 1040337 1040540 R similar to Yersinia pestis YPO3260 hypothetical protein (100% evalue=5.E-31); hypothetical protein complement(1040337..1040540) Yersinia pseudotuberculosis IP 32953 2953372 YP_069405.1 CDS YPTB0864 NC_006155.1 1040838 1041683 D similar to Yersinia pestis YPO3259 rpiR-family transcriptional regulatory protein (100% evalue=1.E-153); Sinorhizobium meliloti SMc04363 hypothetical protein (32.7% evalue=1.E-30); rpiR family transcriptional regulatory protein 1040838..1041683 Yersinia pseudotuberculosis IP 32953 2953373 YP_069406.1 CDS YPTB0865 NC_006155.1 1041685 1041900 D similar to Yersinia pestis YPO3258 membrane protein. 94% identical.; hypothetical protein 1041685..1041900 Yersinia pseudotuberculosis IP 32953 2953374 YP_069407.1 CDS YPTB0866 NC_006155.1 1042011 1042799 D similar to Yersinia pestis YPO3257 amino acid ABC transporter, periplasmic protein (99.6% evalue=1.E-145); Agrobacterium tumefaciens AGR_C_2566 antigenic protein (61.1% evalue=5.E-82); amino acid ABC transporter substrate-binding protein 1042011..1042799 Yersinia pseudotuberculosis IP 32953 2953375 YP_069408.1 CDS YPTB0867 NC_006155.1 1042812 1043480 D similar to Yersinia pestis YPO3256 amino acid ABC transporter, permease (100% evalue=1.E-119); Agrobacterium tumefaciens AGR_C_2567 amino acid ABC transporter, permease (55.2% evalue=2.E-59); amino acid ABC transporter permease 1042812..1043480 Yersinia pseudotuberculosis IP 32953 2953376 YP_069409.1 CDS YPTB0868 NC_006155.1 1043477 1044130 D similar to Yersinia pestis YPO3255 amino acid ABC transporter, permease (99.5% evalue=1.E-122); Agrobacterium tumefaciens Atu1390 ABC transporter, membrane spanning protein (60.9% evalue=1.E-67); amino acid ABC transporter permease 1043477..1044130 Yersinia pseudotuberculosis IP 32953 2953377 YP_069410.1 CDS YPTB0869 NC_006155.1 1044111 1044857 D similar to Yersinia pestis YPO3254 amino acid ABC transporter, ATP-binding protein (100% evalue=1.E-137); Ralstonia solanacearum RS01498 probable amino-acid ATP-binding ABC transporter protein (63.2% evalue=1.E-79); amino acid ABC transporter ATP-binding protein 1044111..1044857 Yersinia pseudotuberculosis IP 32953 2953378 YP_069411.1 CDS YPTB0870 NC_006155.1 1044889 1046214 D similar to Caulobacter crescentus CC2604 aminotransferase, class V (60.6% evalue=1.E-136); B. halodurans BH0762 transaminase (52.6% evalue=1.E-116); class V aminotransferase 1044889..1046214 Yersinia pseudotuberculosis IP 32953 2953379 YP_069412.1 CDS YPTB0871 NC_006155.1 1046214 1047497 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1046214..1047497 Yersinia pseudotuberculosis IP 32953 2953380 YP_069413.1 CDS yafV NC_006155.1 1047598 1048368 R similar to Salmonella typhi STY0353 possible hydrolase (67.4% evalue=1.E-100); Salmonella typhimurium STM0308 yafV; amidohydrolase (67.8% evalue=1.E-101); hypothetical protein complement(1047598..1048368) Yersinia pseudotuberculosis IP 32953 2956936 YP_069414.1 CDS ybdL NC_006155.1 1048356 1049516 R catalyzes the transfer of an amino moiety; aminotransferase complement(1048356..1049516) Yersinia pseudotuberculosis IP 32953 2956963 YP_069415.1 CDS YPTB0874 NC_006155.1 1049656 1050324 D catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1049656..1050324 Yersinia pseudotuberculosis IP 32953 2953381 YP_069416.1 CDS YPTB0875 NC_006155.1 1050321 1051010 D similar to Xylella fastidiosa XF2211 enolase-phosphatase (48.5% evalue=2.E-50); Pseudomonas aeruginosa PA1685 masA; enolase-phosphatase E-1 (50.6% evalue=3.E-55); enolase 1050321..1051010 Yersinia pseudotuberculosis IP 32953 2953382 YP_069417.1 CDS YPTB0876 NC_006155.1 1051109 1051651 D similar to Xylella fastidiosa XF2210 dioxygenase (52.2% evalue=5.E-51); Pseudomonas aeruginosa PA1684 probable oxidase (55.8% evalue=3.E-56); methionine salvage pathway enzyme E-2/E-2' 1051109..1051651 Yersinia pseudotuberculosis IP 32953 2953383 YP_069418.1 CDS eif NC_006155.1 1051684 1052724 R similar to Thermotoga maritima TM0911 translation initiation factor, eIF-2B alpha subunit-related (44.7% evalue=2.E-65); A. aeolicus aq_2114 eif; initiation factor eIF-2B alpha subunit (45.9% evalue=4.E-66); translation initiation factor EIF-2B subunit alpha complement(1051684..1052724) Yersinia pseudotuberculosis IP 32953 2955499 YP_069419.1 CDS mtnK NC_006155.1 1052920 1054143 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1052920..1054143 Yersinia pseudotuberculosis IP 32953 2953384 YP_069420.1 CDS rscB NC_006155.1 1055346 1057136 D similar to Yersinia pestis YPO3248 hxuB; surface-exposed protein (99.6% evalue=0); H. influenzae HI0263 hxuB; heme-hemopexin utilization protein B precursor (30.4% evalue=1.E-65); TPS secretion family afimbrial adhesion 1055346..1057136 Yersinia pseudotuberculosis IP 32953 2956551 YP_069421.1 CDS rscA NC_006155.1 1057177 1063347 D similar to Yersinia pestis YPO3247 hmwA; adhesin (95.6% evalue=0); adhesin 1057177..1063347 Yersinia pseudotuberculosis IP 32953 2956550 YP_069422.1 CDS rcsC NC_006155.1 1063502 1065355 D similar to Yersinia pestis YPO3246 hmwC; accessory processing protein (99.3% evalue=0); accessory processing protein 1063502..1065355 Yersinia pseudotuberculosis IP 32953 2956408 YP_069423.1 CDS YPTB0882 NC_006155.1 1065357 1066103 D similar to Yersinia pestis YPO3245 hypothetical protein (100% evalue=1.E-141); hypothetical protein 1065357..1066103 Yersinia pseudotuberculosis IP 32953 2953385 YP_069424.1 CDS fadE NC_006155.1 1066275 1068722 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(1066275..1068722) Yersinia pseudotuberculosis IP 32953 2955524 YP_069425.1 CDS gmhA NC_006155.1 1068962 1069543 D catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1068962..1069543 Yersinia pseudotuberculosis IP 32953 2955962 YP_069426.1 CDS yafJ NC_006155.1 1069746 1070519 D similar to Yersinia pestis YPO3242 conserved hypothetical protein (100% evalue=1.E-155); Escherichia coli b0223 yafJ; amidotransferase (86.2% evalue=1.E-134); hypothetical protein 1069746..1070519 Yersinia pseudotuberculosis IP 32953 2956934 YP_069427.1 CDS yafK NC_006155.1 1070484 1071224 R similar to Yersinia pestis YPO3241 yafK; exported protein (99.1% evalue=1.E-141); Salmonella typhi STY0357 yafK; exported protein (60.7% evalue=7.E-82); hypothetical protein complement(1070484..1071224) Yersinia pseudotuberculosis IP 32953 2956935 YP_069428.1 CDS nqrA NC_006155.1 1071720 1073063 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1071720..1073063 Yersinia pseudotuberculosis IP 32953 2956148 YP_069429.1 CDS nqrB NC_006155.1 1073067 1074308 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1073067..1074308 Yersinia pseudotuberculosis IP 32953 2956149 YP_069430.1 CDS nqrC NC_006155.1 1074298 1075098 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1074298..1075098 Yersinia pseudotuberculosis IP 32953 2956150 YP_069431.1 CDS nqrD NC_006155.1 1075091 1075720 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1075091..1075720 Yersinia pseudotuberculosis IP 32953 2956151 YP_069432.1 CDS nqrE NC_006155.1 1075727 1076323 D Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1075727..1076323 Yersinia pseudotuberculosis IP 32953 2956152 YP_069433.1 CDS nqrF NC_006155.1 1076339 1077562 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1076339..1077562 Yersinia pseudotuberculosis IP 32953 2956153 YP_069434.1 CDS apbE NC_006155.1 1077603 1078625 D similar to Yersinia pestis YPO3234 apbE; thiamine biosynthesis lipoprotein (99.7% evalue=0); Vibrio cholerae VC2289 thiamin biosynthesis lipoprotein ApbE (64.2% evalue=1.E-118); thiamine biosynthesis lipoprotein 1077603..1078625 Yersinia pseudotuberculosis IP 32953 2955200 YP_069435.1 CDS YPTB0894 NC_006155.1 1078638 1078865 D similar to Yersinia pestis YPO3233 exported protein (100% evalue=3.E-37); Vibrio cholerae VC2288 conserved hypothetical protein (58.8% evalue=1.E-19); hypothetical protein 1078638..1078865 Yersinia pseudotuberculosis IP 32953 2953386 YP_069436.1 CDS YPTB0895 NC_006155.1 1079110 1080057 R similar to Yersinia pestis YPO3232 exported protein (99% evalue=1.E-177); hypothetical protein complement(1079110..1080057) Yersinia pseudotuberculosis IP 32953 2953387 YP_069437.1 CDS dinP NC_006155.1 1080413 1081471 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1080413..1081471 Yersinia pseudotuberculosis IP 32953 2955460 YP_069438.2 CDS pepD NC_006155.1 1081585 1083045 R similar to Yersinia pestis YPO3230 pepD, pepH; aminoacyl-histidine dipeptidase (99.5% evalue=0); Escherichia coli JW0227 pepD; X-his dipeptidase precursor (78.3% evalue=0); aminoacyl-histidine dipeptidase complement(1081585..1083045) Yersinia pseudotuberculosis IP 32953 2956232 YP_069439.1 CDS YPTB0898 NC_006155.1 1084920 1085831 D similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (38.2% evalue=1.E-12); LysR family transcriptional regulator 1084920..1085831 Yersinia pseudotuberculosis IP 32953 2953388 YP_069440.1 CDS YPTB0899 NC_006155.1 1086291 1087895 R similar to Yersinia pestis YPO3227 carbohydrate-binding protein (100% evalue=0); Vibrio cholerae VCA0140 spindolin-related protein (34.5% evalue=6.E-50); carbohydrate-binding protein complement(1086291..1087895) Yersinia pseudotuberculosis IP 32953 2953389 YP_069441.1 CDS YPTB0900 NC_006155.1 1088092 1088397 R similar to Yersinia pestis YPO3226 membrane protein.; holin protein complement(1088092..1088397) Yersinia pseudotuberculosis IP 32953 2953390 YP_069442.1 CDS gpt NC_006155.1 1088824 1089282 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1088824..1089282 Yersinia pseudotuberculosis IP 32953 2955742 YP_069443.1 CDS frsA NC_006155.1 1089409 1090656 D forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1089409..1090656 Yersinia pseudotuberculosis IP 32953 2956932 YP_069444.1 CDS crl NC_006155.1 1090716 1091117 D involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 1090716..1091117 Yersinia pseudotuberculosis IP 32953 2955361 YP_069445.1 CDS proB NC_006155.1 1091294 1092397 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1091294..1092397 Yersinia pseudotuberculosis IP 32953 2956323 YP_069446.1 CDS proA NC_006155.1 1092407 1093666 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1092407..1093666 Yersinia pseudotuberculosis IP 32953 2956322 YP_069447.1 CDS YPTB0906 NC_006155.1 1093994 1094752 D similar to Yersinia pestis YPO3220 conserved hypothetical protein (99.2% evalue=1.E-140); Salmonella typhimurium STM1798 ycgR; inner membrane protein (44.2% evalue=2.E-49); hypothetical protein 1093994..1094752 Yersinia pseudotuberculosis IP 32953 2953391 YP_069448.1 CDS YPTB0907 NC_006155.1 1094935 1095204 D similar to Yersinia pestis YPO3219 membrane protein (100% evalue=6.E-42); hypothetical protein 1094935..1095204 Yersinia pseudotuberculosis IP 32953 2953392 YP_069449.1 CDS yafE NC_006155.1 1095450 1095971 D similar to Yersinia pestis YPO3218 conserved hypothetical protein (98.2% evalue=6.E-94); Escherichia coli ECs0206 biotin synthesis protein (64% evalue=2.E-64); methyltransferase in menaquinone/biotin biosynthesis 1095450..1095971 Yersinia pseudotuberculosis IP 32953 2956933 YP_069450.1 CDS YPTB0909 NC_006155.1 1096218 1096433 R similar to Yersinia pestis YPO3217 hypothetical protein. 88% identical.; hypothetical protein complement(1096218..1096433) Yersinia pseudotuberculosis IP 32953 2953393 YP_069451.1 CDS YPTB0910 NC_006155.1 1096701 1097258 D similar to Yersinia pestis YPO3216 methyltransferase (99.4% evalue=1.E-102); B. halodurans BH2056 unknown conserved protein in others (28.8% evalue=3.E-15); methyltransferase 1096701..1097258 Yersinia pseudotuberculosis IP 32953 2953394 YP_069452.1 CDS aroL NC_006155.1 1097505 1098029 D type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1097505..1098029 Yersinia pseudotuberculosis IP 32953 2955229 YP_069453.1 CDS yaiE NC_006155.1 1098526 1098813 D similar to Yersinia pestis YPO3213 conserved hypothetical protein (100% evalue=6.E-50); Salmonella typhi STY0424 yaiE; conserved hypothetical protein (65.9% evalue=1.E-31); hypothetical protein 1098526..1098813 Yersinia pseudotuberculosis IP 32953 2956939 YP_069454.1 CDS rdgC NC_006155.1 1099035 1099946 R Required for efficient pilin antigenic variation; recombination associated protein complement(1099035..1099946) Yersinia pseudotuberculosis IP 32953 2956411 YP_069455.1 CDS yajF NC_006155.1 1100279 1101193 D catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 1100279..1101193 Yersinia pseudotuberculosis IP 32953 2956942 YP_069456.1 CDS sbcC NC_006155.1 1101662 1105351 R similar to Salmonella typhimurium STM0395 sbcC; ATP-dependent dsDNA exonuclease (43.9% evalue=0); Pseudomonas aeruginosa PA4282 probable exonuclease (33.3% evalue=1.E-140); ATP-dependent dsDNA exonuclease complement(1101662..1105351) Yersinia pseudotuberculosis IP 32953 2956572 YP_069457.1 CDS sbcD NC_006155.1 1105348 1106592 R with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease SbcD complement(1105348..1106592) Yersinia pseudotuberculosis IP 32953 2956573 YP_069458.1 CDS phoB NC_006155.1 1106860 1107549 D similar to Yersinia pestis YPO3205 phoB; phosphate regulon transcriptional regulatory protein (100% evalue=1.E-129); Salmonella typhi STY0432 phoB; phosphate regulon transcriptional regulatory protein PhoB (90.3% evalue=1.E-119); two-component regulatory system response regulator 1106860..1107549 Yersinia pseudotuberculosis IP 32953 2956266 YP_069459.1 CDS phoR NC_006155.1 1107574 1108890 D membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 1107574..1108890 Yersinia pseudotuberculosis IP 32953 2956270 YP_069460.1 CDS pstS NC_006155.1 1108912 1109976 D similar to Yersinia pestis YPO3203 pstS; phosphate binding protein (99.7% evalue=0); Pseudomonas aeruginosa PA5369 phosphate transport system substrate-binding protein (58.1% evalue=2.E-97); phosphate ABC transporter substrate-binding protein 1108912..1109976 Yersinia pseudotuberculosis IP 32953 2956354 YP_069461.1 CDS brnQ NC_006155.1 1110450 1111769 D similar to Yersinia pestis YPO3202 brnQ; branched-chain amino acid transport system II carrier protein (100% evalue=0); Salmonella typhimurium STM0399 brnQ; LIVCS family, branched chain amino acid transporter system II (LIV-II) (75.9% evalue=0); LIVCS family branched chain amino acid transporter system II (LIV-II) 1110450..1111769 Yersinia pseudotuberculosis IP 32953 2955296 YP_069462.1 CDS proY NC_006155.1 1111845 1113236 D cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; permease 1111845..1113236 Yersinia pseudotuberculosis IP 32953 2956330 YP_069463.1 CDS malZ NC_006155.1 1113831 1115660 D similar to Yersinia pestis YPO3200 malZ; maltodextrin glucosidase (99.8% evalue=0); Salmonella typhimurium STM0401 malZ; maltodextrin glucosidase (58.8% evalue=0); maltodextrin glucosidase 1113831..1115660 Yersinia pseudotuberculosis IP 32953 2955992 YP_069464.1 CDS YPTB0923 NC_006155.1 1115815 1116495 D similar to Yersinia pestis YPO3199 probable short-chain dehydrogenase (100% evalue=1.E-126); Pseudomonas aeruginosa PA4079 probable dehydrogenase (38.9% evalue=2.E-39); short chain dehydrogenase 1115815..1116495 Yersinia pseudotuberculosis IP 32953 2953395 YP_069465.1 CDS ggt NC_006155.1 1116703 1118466 R similar to Ralstonia solanacearum RS03690 ggt1, RSp0274; probable gamma-glutamyltranspeptidase signal peptide protein (57.4% evalue=0); Mesorhizobium loti mlr5711 gamma-glutamyltranspeptidase (56.5% evalue=1.E-174); gamma-glutamyltranspeptidase complement(1116703..1118466) Yersinia pseudotuberculosis IP 32953 2955684 YP_069466.1 CDS ahpC NC_006155.1 1118856 1119458 R similar to Yersinia pestis YPO3194 ahpC; alkyl hydroperoxide reductase subunit c (100% evalue=1.E-114); Salmonella typhi STY0440 thiol - alkyl hydroperoxide reductase (86.5% evalue=1.E-100); alkyl hydroperoxide reductase complement(1118856..1119458) Yersinia pseudotuberculosis IP 32953 2955179 YP_069467.1 CDS yajB NC_006155.1 1119797 1120378 R similar to Yersinia pestis YPO3193 conserved hypothetical protein (100% evalue=1.E-111); Salmonella typhi STY0441 yajB; conserved hypothetical protein (61.6% evalue=3.E-66); hypothetical protein complement(1119797..1120378) Yersinia pseudotuberculosis IP 32953 2956940 YP_069468.1 CDS queA NC_006155.1 1120581 1121651 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1120581..1121651 Yersinia pseudotuberculosis IP 32953 2956396 YP_069469.1 CDS tgt NC_006155.1 1121744 1122868 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1121744..1122868 Yersinia pseudotuberculosis IP 32953 2956686 YP_069470.1 CDS yajC NC_006155.1 1122980 1123315 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1122980..1123315 Yersinia pseudotuberculosis IP 32953 2956941 YP_069471.1 CDS secD NC_006155.1 1123343 1125190 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1123343..1125190 Yersinia pseudotuberculosis IP 32953 2956584 YP_069472.1 CDS secF NC_006155.1 1125201 1126169 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1125201..1126169 Yersinia pseudotuberculosis IP 32953 2956585 YP_069473.1 CDS YPTB0932 NC_006155.1 1126421 1127743 D similar to Yersinia pestis YPO3186 hypothetical protein (100% evalue=1.E-110); hypothetical protein 1126421..1127743 Yersinia pseudotuberculosis IP 32953 2953396 YP_069474.1 CDS nrdR NC_006155.1 1127814 1128263 D similar to Yersinia pestis YPO3184 conserved hypothetical protein (100% evalue=9.E-80); Escherichia coli b0413 ybaD; hypothetical 17.2 kD protein in tsx-ribg intergenic region (ORF1) (86.5% evalue=8.E-71); transcriptional regulator NrdR 1127814..1128263 Yersinia pseudotuberculosis IP 32953 2956954 YP_069475.1 CDS ribD NC_006155.1 1128413 1129522 D riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 1128413..1129522 Yersinia pseudotuberculosis IP 32953 2956452 YP_069476.1 CDS ribH NC_006155.1 1129658 1130128 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1129658..1130128 Yersinia pseudotuberculosis IP 32953 2956455 YP_069477.1 CDS nusB NC_006155.1 1130149 1130565 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1130149..1130565 Yersinia pseudotuberculosis IP 32953 2956182 YP_069478.1 CDS thiL NC_006155.1 1130806 1131795 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1130806..1131795 Yersinia pseudotuberculosis IP 32953 2956696 YP_069479.1 CDS pgpA NC_006155.1 1131788 1132273 D hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 1131788..1132273 Yersinia pseudotuberculosis IP 32953 2956244 YP_069480.1 CDS dxs NC_006155.1 1132414 1134273 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1132414..1134273) Yersinia pseudotuberculosis IP 32953 2955492 YP_069481.1 CDS ispA NC_006155.1 1134429 1135349 R similar to Yersinia pestis YPO3176 ispA; geranyltranstransferase (99.6% evalue=1.E-170); Salmonella typhi STY0462 ispA; geranyltranstransferase (73.1% evalue=1.E-122); geranyltranstransferase complement(1134429..1135349) Yersinia pseudotuberculosis IP 32953 2955898 YP_069482.1 CDS xseB NC_006155.1 1135354 1135608 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1135354..1135608) Yersinia pseudotuberculosis IP 32953 2956910 YP_069483.1 CDS YPTB0942 NC_006155.1 1135690 1135860 D similar to Yersinia pestis YPO3174 hypothetical protein. 100% identical; hypothetical protein 1135690..1135860 Yersinia pseudotuberculosis IP 32953 2953397 YP_069484.1 CDS thiI NC_006155.1 1135958 1137409 D Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1135958..1137409 Yersinia pseudotuberculosis IP 32953 2956694 YP_069485.1 CDS thiJ NC_006155.1 1137477 1138067 R similar to Yersinia pestis YPO3172 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme (100% evalue=1.E-107); Escherichia coli b0424 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (73.9% evalue=5.E-78); DJ-1 family protein complement(1137477..1138067) Yersinia pseudotuberculosis IP 32953 2956695 YP_069486.1 CDS panE NC_006155.1 1138030 1138941 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(1138030..1138941) Yersinia pseudotuberculosis IP 32953 2956210 YP_069487.1 CDS yajQ NC_006155.1 1139173 1139664 D nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1139173..1139664 Yersinia pseudotuberculosis IP 32953 2956944 YP_069488.1 CDS yajR NC_006155.1 1139788 1141158 R similar to Yersinia pestis YPO3169 yajR; transporter (100% evalue=0); Salmonella typhi STY0475 hpothetical major facilitator family transport protein (75.2% evalue=0); MFS multidrug efflux pump complement(1139788..1141158) Yersinia pseudotuberculosis IP 32953 2956945 YP_069489.1 CDS cyoE NC_006155.1 1141636 1142526 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(1141636..1142526) Yersinia pseudotuberculosis IP 32953 2955397 YP_069490.1 CDS cyoD NC_006155.1 1142537 1142869 R similar to Yersinia pestis YPO3167 cyoD; cytochrome O ubiquinol oxidase subunit CyoD (100% evalue=3.E-56); Escherichia coli b0429 cyoD; cytochrome o ubiquinol oxidase operon protein cyoD (65.1% evalue=1.E-35); cytochrome o ubiquinol oxidase subunit IV complement(1142537..1142869) Yersinia pseudotuberculosis IP 32953 2955396 YP_069491.1 CDS cyoC NC_006155.1 1142869 1143483 R similar to Yersinia pestis YPO3166 cyoC; cytochrome O ubiquinol oxidase subunit III (100% evalue=1.E-116); Salmonella typhimurium STM0441 cyoC; cytochrome o ubiquinol oxidase subunit III (76% evalue=2.E-89); cytochrome o ubiquinol oxidase subunit III complement(1142869..1143483) Yersinia pseudotuberculosis IP 32953 2955395 YP_069492.1 CDS cyoB NC_006155.1 1143473 1145464 R similar to Yersinia pestis YPO3165 cyoB; cytochrome O ubiquinol oxidase subunit I (100% evalue=0); Salmonella typhimurium STM0442 cyoB; cytochrome o ubiquinol oxidase subunit I (84.1% evalue=0); cytochrome o ubiquinol oxidase subunit I complement(1143473..1145464) Yersinia pseudotuberculosis IP 32953 2955394 YP_069493.1 CDS cyoA NC_006155.1 1145469 1146425 R similar to Yersinia pestis YPO3164 cyoA; cytochrome O ubiquinol oxidase subunit II (100% evalue=0); Escherichia coli b0432 cyoA; cytochrome o ubiquinol oxidase subunit II (66.8% evalue=1.E-118); cytochrome o ubiquinol oxidase subunit II complement(1145469..1146425) Yersinia pseudotuberculosis IP 32953 2955393 YP_069494.1 CDS yfeN NC_006155.1 1146795 1147562 R similar to Yersinia pestis YPO3163 yfeN; exported protein (100% evalue=1.E-154); Salmonella typhimurium STM2423 yfeN; outer membrane protein (60.9% evalue=1.E-91); hypothetical protein complement(1146795..1147562) Yersinia pseudotuberculosis IP 32953 2957023 YP_069495.1 CDS ampG NC_006155.1 1147854 1149332 R in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter complement(1147854..1149332) Yersinia pseudotuberculosis IP 32953 2955191 YP_069496.1 CDS yajG NC_006155.1 1149449 1150027 R similar to Yersinia pestis YPO3161 yajG; lipoprotein (100% evalue=1.E-102); Salmonella typhi STY0487 yajG; lipoprotein (73.4% evalue=3.E-77); hypothetical protein complement(1149449..1150027) Yersinia pseudotuberculosis IP 32953 2956943 YP_069497.1 CDS bolA NC_006155.1 1150376 1150696 D positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA 1150376..1150696 Yersinia pseudotuberculosis IP 32953 2955295 YP_069498.1 CDS YPTB0957 NC_006155.1 1150837 1151040 D similar to Yersinia pestis YPO3159 hypothetical protein. 100% identical.; hypothetical protein 1150837..1151040 Yersinia pseudotuberculosis IP 32953 2953398 YP_069499.1 CDS tig NC_006155.1 1151113 1152417 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1151113..1152417 Yersinia pseudotuberculosis IP 32953 2956706 YP_069500.1 CDS clpP NC_006155.1 1152879 1153502 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1152879..1153502 Yersinia pseudotuberculosis IP 32953 2955339 YP_069501.1 CDS clpX NC_006155.1 1153708 1154979 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1153708..1154979 Yersinia pseudotuberculosis IP 32953 2955340 YP_069502.1 CDS lon NC_006155.1 1155174 1157528 D similar to Yersinia pestis YPO3155 lon, capR, deg, muc, lopA; ATP-dependent protease La (100% evalue=0); Salmonella typhi STY0492 lon; Lon protease (91% evalue=0); DNA-binding ATP-dependent protease La 1155174..1157528 Yersinia pseudotuberculosis IP 32953 2955961 YP_069503.1 CDS hupB NC_006155.1 1157746 1158018 D histone-like DNA-binding protein; transcriptional regulator HU subunit beta 1157746..1158018 Yersinia pseudotuberculosis IP 32953 2955850 YP_069504.1 CDS ppiD NC_006155.1 1158319 1160205 D similar to Yersinia pestis YPO3153 ppiD; peptidyl-prolyl cis-trans isomerase D (99.8% evalue=0); Salmonella typhimurium STM0452 cypD; peptidyl prolyl isomerase (59.4% evalue=0); peptidyl-prolyl cis-trans isomerase 1158319..1160205 Yersinia pseudotuberculosis IP 32953 2956309 YP_069505.1 CDS YPTB0964 NC_006155.1 1160345 1160791 D similar to Yersinia pestis YPO3152 ybaV; exported protein (100% evalue=1.E-78); Salmonella typhi STY0495 ybaV; exported protein (44.7% evalue=4.E-15); DNA uptake protein ComEA-like protein 1160345..1160791 Yersinia pseudotuberculosis IP 32953 2953399 YP_069506.1 CDS ybaW NC_006155.1 1161145 1161552 D similar to Yersinia pestis YPO3151 conserved hypothetical protein (100% evalue=2.E-74); Salmonella typhi STY0496 conserved hypothetical protein (69.4% evalue=2.E-48); hypothetical protein 1161145..1161552 Yersinia pseudotuberculosis IP 32953 2956958 YP_069507.1 CDS ybaX NC_006155.1 1161638 1162336 R YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC complement(1161638..1162336) Yersinia pseudotuberculosis IP 32953 2956959 YP_069508.1 CDS YPTB0967 NC_006155.1 1162649 1164352 R similar to Yersinia pestis YPO3149 conserved hypothetical protein (99.2% evalue=0); Escherichia coli Z0552 ybaE; orf, hypothetical protein (46.1% evalue=1.E-151); hypothetical protein complement(1162649..1164352) Yersinia pseudotuberculosis IP 32953 2953400 YP_069509.1 CDS cof NC_006155.1 1164457 1165278 D similar to Yersinia pestis YPO3148 haloacid dehalogenase-like hydrolase (99.2% evalue=1.E-161); Escherichia coli ECs0500 hypothetical protein (57.3% evalue=1.E-86); haloacid dehalogenase 1164457..1165278 Yersinia pseudotuberculosis IP 32953 2955348 YP_069510.1 CDS YPTB0969 NC_006155.1 1165490 1166530 R similar to Yersinia pestis YPO3147 Pyridoxal-phosphate dependent protein (99.7% evalue=0); Salmonella typhimurium STM0458 cysteine synthase/cystathionine beta-synthase (76.8% evalue=1.E-154); pyridoxal-phosphate dependent protein complement(1165490..1166530) Yersinia pseudotuberculosis IP 32953 2953401 YP_069511.1 CDS ybaO NC_006155.1 1166656 1167117 D similar to Yersinia pestis YPO3146 probable AsnC-family regulatory protein (100% evalue=3.E-84); Salmonella typhi STY0502 ybaO; hypothetical transcriptional regulator (76.8% evalue=4.E-63); transcription regulator AsnC 1166656..1167117 Yersinia pseudotuberculosis IP 32953 2956957 YP_069512.1 CDS mdlA NC_006155.1 1167219 1168985 D similar to Yersinia pestis YPO3145 mdlA, mdl; probable ABC transporter (ATP-binding protein) (99.4% evalue=0); Escherichia coli JW0438 mdlA; Multidrag resistance-like ATP-binding protien (76.5% evalue=0); multidrug transporter membrane\ATP-binding components 1167219..1168985 Yersinia pseudotuberculosis IP 32953 2956007 YP_069513.1 CDS mdlB NC_006155.1 1168978 1170801 D similar to Yersinia pestis YPO3144 mdlB, mdl; probable ATP transporter (ATP-binding protein) (99.1% evalue=0); Escherichia coli b0449 mdlB; multidrug resistance protein (78.7% evalue=0); multidrug transporter membrane\ATP-binding components 1168978..1170801 Yersinia pseudotuberculosis IP 32953 2956008 YP_069514.1 CDS glnK NC_006155.1 1171253 1171591 D indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 1171253..1171591 Yersinia pseudotuberculosis IP 32953 2955700 YP_069515.1 CDS amtB NC_006155.1 1171625 1172920 D similar to Yersinia pestis YPO3142 amtB; probable ammonium transporter (100% evalue=0); Escherichia coli b0451 amtB; probable ammonium transporter (79% evalue=0); ammonium transporter 1171625..1172920 Yersinia pseudotuberculosis IP 32953 2955194 YP_069516.1 CDS tesB NC_006155.1 1173182 1174042 R similar to Yersinia pestis YPO3141 tesB; acyl-CoA thioesterase II (100% evalue=1.E-166); Escherichia coli ECs0506 acyl-CoA thioesterase II (78.9% evalue=1.E-132); acyl-CoA thioesterase complement(1173182..1174042) Yersinia pseudotuberculosis IP 32953 2956685 YP_069517.1 CDS ybaY NC_006155.1 1174299 1174820 D similar to Yersinia pestis YPO3140 ybaY; lipoprotein (99.4% evalue=7.E-91); Escherichia coli Z0565 ybaY; glycoprotein/polysaccharide metabolism (56.2% evalue=7.E-46); lipoprotein 1174299..1174820 Yersinia pseudotuberculosis IP 32953 2956960 YP_069518.1 CDS YPTB0977 NC_006155.1 1174956 1175519 R similar to Yersinia pestis YPO3139 6-O-methylguanine DNA methyltransferase family protein (97.4% evalue=3.E-83); Escherichia coli Z0566 ybaZ; orf, hypothetical protein (62.6% evalue=2.E-36); 6-O-methylguanine DNA methyltransferase complement(1174956..1175519) Yersinia pseudotuberculosis IP 32953 2953402 YP_069519.1 CDS ymoA NC_006155.1 1176251 1176454 R with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein complement(1176251..1176454) Yersinia pseudotuberculosis IP 32953 2957095 YP_069520.1 CDS YPTB0979 NC_006155.1 1176503 1176871 R similar to Yersinia pestis YPO3137 conserved hypothetical protein (100% evalue=2.E-68); Escherichia coli b0461 ybaJ; hypothetical 14.6 kD protein in hha-acrB intergenic region (65.7% evalue=2.E-40); hypothetical protein complement(1176503..1176871) Yersinia pseudotuberculosis IP 32953 2953403 YP_069521.1 CDS YPTB0980 NC_006155.1 1177030 1177383 R similar to Yersinia pestis YPO3136 hypothetical protein (100% evalue=2.E-63); hypothetical protein complement(1177030..1177383) Yersinia pseudotuberculosis IP 32953 2953404 YP_069522.1 CDS rpmJ NC_006155.1 1178247 1178390 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(1178247..1178390) Yersinia pseudotuberculosis IP 32953 2953405 YP_069523.1 CDS rpmE2 NC_006155.1 1178406 1178666 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1178406..1178666) Yersinia pseudotuberculosis IP 32953 2957092 YP_069524.1 CDS acrB NC_006155.1 1178852 1182004 R similar to Yersinia pestis YPO3133 acrB, acrE; multidrug efflux protein (99.8% evalue=0); Salmonella typhimurium STM0475 acrB; RND family, acridine efflux pump (84% evalue=0); acridine/multidrug efflux system protein complement(1178852..1182004) Yersinia pseudotuberculosis IP 32953 2955171 YP_069525.1 CDS acrA NC_006155.1 1182021 1183208 R similar to Yersinia pestis YPO3132 acrA, mtcA; multidrug efflux protein (100% evalue=0); Salmonella typhimurium STM0476 acrA; acridine efflux pump (73.9% evalue=1.E-162); acridine efflux pump, membrane fusion (MFP/HlyD) family protein complement(1182021..1183208) Yersinia pseudotuberculosis IP 32953 2955170 YP_069526.1 CDS acrR NC_006155.1 1183352 1184008 D regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 1183352..1184008 Yersinia pseudotuberculosis IP 32953 2955172 YP_069527.1 CDS ychN NC_006155.1 1184021 1184374 D similar to Yersinia pestis YPO3130 conserved hypothetical protein (100% evalue=2.E-60); Salmonella typhimurium STM1769 ychN; ACR involved in intracellular sulfur reduction (81.1% evalue=3.E-49); hypothetical protein 1184021..1184374 Yersinia pseudotuberculosis IP 32953 2956986 YP_069528.1 CDS kefA NC_006155.1 1184613 1188032 D small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1184613..1188032 Yersinia pseudotuberculosis IP 32953 2955925 YP_069529.1 CDS ybaM NC_006155.1 1188406 1188561 R similar to Yersinia pestis YPO3128 conserved hypothetical protein (100% evalue=6.E-22); Salmonella typhimurium STM0480 ybaM; inner membrane protein (54.9% evalue=1.E-07); hypothetical protein complement(1188406..1188561) Yersinia pseudotuberculosis IP 32953 2956955 YP_069530.1 CDS YPTB0989 NC_006155.1 1188732 1189268 R similar to Yersinia pestis YPO3127 priC; primosomal replication protein n'' (98.8% evalue=1.E-93); Salmonella typhimurium STM0481 priC; primosomal replication protein N (39.2% evalue=2.E-26); primosomal replication protein N'' complement(1188732..1189268) Yersinia pseudotuberculosis IP 32953 2953406 YP_069531.1 CDS ybaN NC_006155.1 1189469 1189849 D similar to Salmonella typhi STY0526 ybaN; membrane protein (69.6% evalue=6.E-49); Salmonella typhimurium STM0482 ybaN; phage gene 58 (69.6% evalue=6.E-49); hypothetical protein 1189469..1189849 Yersinia pseudotuberculosis IP 32953 2956956 YP_069532.1 CDS apt NC_006155.1 1190088 1190651 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1190088..1190651 Yersinia pseudotuberculosis IP 32953 2955201 YP_069533.1 CDS dnaX NC_006155.1 1191307 1193283 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1191307..1193283 Yersinia pseudotuberculosis IP 32953 2955478 YP_069534.1 CDS ybaB NC_006155.1 1193339 1193671 D similar to Yersinia pestis YPO3121 conserved hypothetical protein (100% evalue=4.E-57); Salmonella typhimurium STM0485 ybaB; cytoplasmic protein (91.8% evalue=3.E-52); hypothetical protein 1193339..1193671 Yersinia pseudotuberculosis IP 32953 2956953 YP_069535.1 CDS recR NC_006155.1 1193671 1194276 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1193671..1194276 Yersinia pseudotuberculosis IP 32953 2956421 YP_069536.1 CDS htpG NC_006155.1 1194468 1196342 D molecular chaperone; heat shock protein 90 1194468..1196342 Yersinia pseudotuberculosis IP 32953 2955844 YP_069537.1 CDS adk NC_006155.1 1196569 1197213 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1196569..1197213 Yersinia pseudotuberculosis IP 32953 2955175 YP_069538.1 CDS hemH NC_006155.1 1197303 1198265 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1197303..1198265 Yersinia pseudotuberculosis IP 32953 2955780 YP_069539.1 CDS ddhD NC_006155.1 1198863 1199852 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 1198863..1199852 Yersinia pseudotuberculosis IP 32953 2955441 YP_069540.1 CDS ddhA NC_006155.1 1199878 1200663 D similar to Yersinia pestis YPO3115 ddhA, rfbF; glucose-1-phosphate cytidylyltransferase (99.6% evalue=1.E-155); Salmonella typhimurium STM2092 rfbF; glucose-1-phosphate cytidylyltransferase (80.5% evalue=1.E-126); glucose-1-phosphate cytidylyltransferase 1199878..1200663 Yersinia pseudotuberculosis IP 32953 2955438 YP_069541.1 CDS ddhB NC_006155.1 1200668 1201741 D similar to Salmonella typhi STY2301 rfbG; CDP-glucose 4,6-dehydratase (73.5% evalue=1.E-161); Salmonella typhimurium STM2091 rfbG; CDP-glucose 4,6-dehydratase (73.2% evalue=1.E-160); CDP-glucose 4,6-dehydratase 1200668..1201741 Yersinia pseudotuberculosis IP 32953 2955439 YP_069542.1 CDS ddhC NC_006155.1 1201759 1203072 D similar to Yersinia pestis YPO3113 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydratase (99.7% evalue=0); Salmonella typhi STY2300 rfbH; dehydratase RfbH (87.4% evalue=0); CDP-4-keto-6-deoxy-D-glucose-3-dehydratase 1201759..1203072 Yersinia pseudotuberculosis IP 32953 2955440 YP_069543.1 CDS prt NC_006155.1 1203109 1203966 D similar to Yersinia pestis YPO3112 prt, rfbS; paratose synthase (99.2% evalue=1.E-159); Salmonella typhi STY2299 rfbS; paratose synthase (43.9% evalue=2.E-64); paratose synthase 1203109..1203966 Yersinia pseudotuberculosis IP 32953 2956332 YP_069544.1 CDS wbyH NC_006155.1 1203967 1205250 D similar to Yersinia pestis YPO3111 wbyH; exported protein (99% evalue=0); P. horikoshii PH0425 hypothetical protein (25.1% evalue=1.E-32); hypothetical protein 1203967..1205250 Yersinia pseudotuberculosis IP 32953 2956893 YP_069545.1 CDS wzx NC_006155.1 1205339 1206682 D similar to Yersinia pestis YPO3110 wzx; O-unit flippase (90.3% evalue=0); O-unit flippase 1205339..1206682 Yersinia pseudotuberculosis IP 32953 2956900 YP_069546.1 CDS YPTB1005 NC_006155.1 1206693 1207676 D similar to Methanocaldococcus jannaschii MJ1057 glycosyl transferase, (25.3% evalue=5.E-10); B. halodurans BH3713 glycosyltransferase (29.7% evalue=2.E-13); hypothetical protein 1206693..1207676 Yersinia pseudotuberculosis IP 32953 2953407 YP_069547.1 CDS wbyJ NC_006155.1 1207848 1208990 D similar to Yersinia pestis YPO3107 wbyJ; mannosyltransferase (99.7% evalue=0); Clostridium acetobutylicum CAC3051 glycosyltransferase (26.6% evalue=2.E-08); mannosyltransferase 1207848..1208990 Yersinia pseudotuberculosis IP 32953 2956894 YP_069548.1 CDS YPTB1007 NC_006155.1 1208987 1210207 D O-unit polymerase-like protein 1208987..1210207 Yersinia pseudotuberculosis IP 32953 2953408 YP_069549.1 CDS wbyK NC_006155.1 1210456 1211469 D similar to Yersinia pestis YPO3104 wbyK; mannosyltransferase (99.7% evalue=0); Synechocystis slr1064 rfbU, mtfA; mannosyltransferase B (36.3% evalue=2.E-41); mannosyltransferase 1210456..1211469 Yersinia pseudotuberculosis IP 32953 2956895 YP_069550.1 CDS gmd NC_006155.1 1211485 1212606 D similar to Escherichia coli JW2038 gmd; GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase) (79.6% evalue=1.E-177); Escherichia coli Z3217 gmd; GDP-D-mannose dehydratase (79.6% evalue=1.E-177); GDP-D-mannose dehydratase 1211485..1212606 Yersinia pseudotuberculosis IP 32953 2955730 YP_069551.1 CDS fcl NC_006155.1 1212612 1213577 D similar to Escherichia coli b2052 fcl, wcaG; GDP-fucose synthetase (75.3% evalue=1.E-142); Escherichia coli JW2037 fcl; GDP-fucose synthetase (75.3% evalue=1.E-142); GDP-fucose synthetase 1212612..1213577 Yersinia pseudotuberculosis IP 32953 2955532 YP_069552.1 CDS manC NC_006155.1 1213743 1215149 D similar to Yersinia pestis YPO3099 manC, rfbM; mannose-1-phosphate guanylyltransferase (100% evalue=0); Salmonella typhimurium STM2105 manC; mannose-1-phosphate in colanic acid gene cluster (61.8% evalue=1.E-167); mannose-1-phosphate guanylyltransferase 1213743..1215149 Yersinia pseudotuberculosis IP 32953 2955996 YP_069553.1 CDS wbyL NC_006155.1 1215152 1215895 D similar to Yersinia pestis YPO3098 wbyL; probable glycosyltransferase (100% evalue=1.E-140); Helicobacter pylori HP0102 conserved hypothetical protein (43.8% evalue=6.E-55); glycosyltransferase 1215152..1215895 Yersinia pseudotuberculosis IP 32953 2956896 YP_069554.1 CDS manB NC_006155.1 1215900 1217273 D similar to Yersinia pestis YPO3097 manB, rfbK; phosphomannomutase (99.7% evalue=0); Escherichia coli JW2033 manB; Phosphomannomutase (PMM) (73.6% evalue=0); phosphomannomutase 1215900..1217273 Yersinia pseudotuberculosis IP 32953 2955994 YP_069555.1 CDS wzz NC_006155.1 1217321 1218472 D part of the ferric enterobactin transport system; necessary for enetrobactin uptake; ferric enterobactin transport protein FepE 1217321..1218472 Yersinia pseudotuberculosis IP 32953 2956902 YP_069556.1 CDS gsk NC_006155.1 1218676 1219980 D similar to Yersinia pestis YPO3095 gsk; inosine-guanosine kinase (100% evalue=0); Salmonella typhimurium STM0491 gsk; inosine-guanosine kinase (84.7% evalue=0); inosine-guanosine kinase 1218676..1219980 Yersinia pseudotuberculosis IP 32953 2955752 YP_069557.1 CDS rosB NC_006155.1 1220077 1221768 R YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein complement(1220077..1221768) Yersinia pseudotuberculosis IP 32953 2956480 YP_069558.1 CDS rosA NC_006155.1 1222003 1223217 R similar to Yersinia pestis YPO3093 rosA, fsr; membrane efflux protein (99.7% evalue=0); Salmonella typhimurium STM0493 fsr; MFS family of transport protein (77.1% evalue=1.E-171); Citation: Bengoechea and Skurnik (2000) Mol. Microbiol. 37:67-80; MFS cationic anti peptides (CAMPs) efflux/K+ antiporter, rosA subunit complement(1222003..1223217) Yersinia pseudotuberculosis IP 32953 2956479 YP_069559.1 CDS YPTB1019 NC_006155.1 1225257 1225496 R similar to Yersinia pestis YPO3089 hypothetical protein (100% evalue=5.E-39); hypothetical protein complement(1225257..1225496) Yersinia pseudotuberculosis IP 32953 2953410 YP_069560.1 CDS YPTB1020 NC_006155.1 1225833 1226312 R similar to Yersinia pestis YPO3088 conserved hypothetical protein (99.3% evalue=2.E-84); Escherichia coli b0481 ybaK; hypothetical 17.1 kD protein in ushA-tesA intergenic region (76.7% evalue=9.E-65); hypothetical protein complement(1225833..1226312) Yersinia pseudotuberculosis IP 32953 2953411 YP_069561.1 CDS YPTB1021 NC_006155.1 1226576 1227385 R similar to Yersinia pestis YPO3087 conserved hypothetical protein (100% evalue=1.E-155); Escherichia coli b0482 ybaP; hypothetical 29.9 kD protein in ushA-tesA intergenic region (56.4% evalue=5.E-81); hypothetical protein complement(1226576..1227385) Yersinia pseudotuberculosis IP 32953 2953412 YP_069562.1 CDS copA NC_006155.1 1227782 1230667 R similar to Yersinia pestis YPO3086 ybaR; Cu2+-exporting ATPase (99.7% evalue=0); Escherichia coli ECs0537 Cu2+-exporting ATPase (66.3% evalue=0); copper exporting ATPase complement(1227782..1230667) Yersinia pseudotuberculosis IP 32953 2955256 YP_069563.1 CDS cueR NC_006155.1 1230874 1231293 D similar to Yersinia pestis YPO3085 cueR; regulatory protein (100% evalue=1.E-75); Salmonella typhimurium STM0499 cueR; heavy metal transcriptional repressor (MerR family) (72.9% evalue=2.E-54); MerR family transcriptional regulator 1230874..1231293 Yersinia pseudotuberculosis IP 32953 2955378 YP_069564.1 CDS YPTB1024 NC_006155.1 1231492 1231941 R similar to Yersinia pestis YPO3084 ybbJ; membrane protein (100% evalue=2.E-84); Escherichia coli JW0477 ybbJ; Hypothetical protein (58.2% evalue=2.E-47); hypothetical protein complement(1231492..1231941) Yersinia pseudotuberculosis IP 32953 2953413 YP_069565.1 CDS YPTB1025 NC_006155.1 1231944 1232858 R similar to Yersinia pestis YPO3083 conserved hypothetical protein (100% evalue=1.E-164); Salmonella typhimurium STM0501 ybbK; inner membrane protein (84.2% evalue=1.E-142); hypothetical protein complement(1231944..1232858) Yersinia pseudotuberculosis IP 32953 2953414 YP_069566.1 CDS YPTB1026 NC_006155.1 1233053 1233922 R similar to Yersinia pestis YPO3082 ybbN; thioredoxin (99.6% evalue=1.E-158); Salmonella typhi STY0550 ybbN; thioredoxin-like protein (71.9% evalue=1.E-114); thioredoxin complement(1233053..1233922) Yersinia pseudotuberculosis IP 32953 2953415 YP_069567.1 CDS YPTB1027 NC_006155.1 1233999 1234775 R similar to Yersinia pestis YPO3081 ybbO; probable short-chain dehydrogenase (100% evalue=1.E-143); Escherichia coli ECs0556 oxidoreductase (68.3% evalue=5.E-99); short chain dehydrogenase complement(1233999..1234775) Yersinia pseudotuberculosis IP 32953 2953416 YP_069568.1 CDS tesA NC_006155.1 1235162 1235800 R similar to Yersinia pestis YPO3080 tesA, apeA, pldC; acyl-CoA thioesterase (100% evalue=1.E-120); Escherichia coli b0494 tesA, apeA; acyl-CoA thioesterase I precursor (protease I) (71.1% evalue=3.E-84); multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 complement(1235162..1235800) Yersinia pseudotuberculosis IP 32953 2956684 YP_069569.1 CDS ybbA NC_006155.1 1235768 1236454 D similar to Yersinia pestis YPO3079 ybbA; ABC transporter ATP-binding protein (99.5% evalue=1.E-123); Escherichia coli ECs0557 ATP-binding component of a transport system (78.9% evalue=1.E-95); ABC transporter ATP-binding protein 1235768..1236454 Yersinia pseudotuberculosis IP 32953 2956961 YP_069570.1 CDS YPTB1030 NC_006155.1 1236451 1238880 D similar to Yersinia pestis YPO3078 ybbP; permease (99.1% evalue=0); Salmonella typhimurium STM0508 ybbP; inner membrane protein (68.9% evalue=0); permease 1236451..1238880 Yersinia pseudotuberculosis IP 32953 2953417 YP_069571.1 CDS purK NC_006155.1 1238924 1239988 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1238924..1239988) Yersinia pseudotuberculosis IP 32953 2956374 YP_069572.1 CDS purE NC_006155.1 1239985 1240509 R Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(1239985..1240509) Yersinia pseudotuberculosis IP 32953 2956370 YP_069573.1 CDS YPTB1033 NC_006155.1 1240825 1241547 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(1240825..1241547) Yersinia pseudotuberculosis IP 32953 2953418 YP_069574.1 CDS ppiB NC_006155.1 1241558 1242052 R similar to Yersinia pestis YPO3074 ppiB; peptidyl-prolyl cis-trans isomerase B (100% evalue=8.E-94); Escherichia coli b0525 ppiB; peptidyl-prolyl cis-trans isomerase B (ppiase B) (rotamase B) (84.7% evalue=7.E-79); peptidyl-prolyl cis-trans isomerase B complement(1241558..1242052) Yersinia pseudotuberculosis IP 32953 2956307 YP_069575.1 CDS cysS NC_006155.1 1242263 1243648 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1242263..1243648 Yersinia pseudotuberculosis IP 32953 2955414 YP_069576.1 CDS YPTB1036 NC_006155.1 1243890 1244102 R similar to Yersinia pestis YPO2825 conserved hypothetical protein (100% evalue=9.E-35); Salmonella typhi STY0587 ybcJ; conserved hypothetical protein (72.8% evalue=5.E-23); hypothetical protein complement(1243890..1244102) Yersinia pseudotuberculosis IP 32953 2953419 YP_069577.1 CDS folD NC_006155.1 1244117 1244983 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1244117..1244983) Yersinia pseudotuberculosis IP 32953 2955633 YP_069578.1 CDS YPTB1038 NC_006155.1 1245351 1245533 R similar to Yersinia pestis YPO2823 putativ regulator. 100% identical.; hypothetical protein complement(1245351..1245533) Yersinia pseudotuberculosis IP 32953 2953420 YP_069579.1 CDS YPTB1039 NC_006155.1 1245792 1245992 R similar to Yersinia pestis YPO2822 hypothetical protein. 96% identical.; hypothetical protein complement(1245792..1245992) Yersinia pseudotuberculosis IP 32953 2953421 YP_069580.1 CDS YPTB1040 NC_006155.1 1246106 1246753 R similar to Yersinia pestis YPO2821 hypothetical protein (98.2% evalue=1.E-61); hypothetical protein complement(1246106..1246753) Yersinia pseudotuberculosis IP 32953 2953422 YP_069581.1 CDS YPTB1041 NC_006155.1 1246738 1247076 R similar to Yersinia pestis YPO2820 hypothetical protein (100% evalue=3.E-61); hypothetical protein complement(1246738..1247076) Yersinia pseudotuberculosis IP 32953 2953423 YP_069582.1 CDS YPTB1043 NC_006155.1 1247610 1247855 D hypothetical protein 1247610..1247855 Yersinia pseudotuberculosis IP 32953 2953425 YP_069583.1 CDS YPTB1044 NC_006155.1 1248255 1248857 D similar to Yersinia pestis YPO2817 CDP-alcohol phosphatidyltransferase (99.5% evalue=1.E-110); Escherichia coli JW1405 hypothetical protein (55.8% evalue=1.E-57); CDP-alcohol phosphatidyltransferase 1248255..1248857 Yersinia pseudotuberculosis IP 32953 2953426 YP_069584.1 CDS YPTB1045 NC_006155.1 1248850 1249779 D similar to Yersinia pestis YPO2816 ynbB; phosphatidate cytidylyltransferase (99.3% evalue=1.E-179); Vibrio cholerae VC1936 phosphatidate cytidylyltransferase, (52.2% evalue=4.E-93); phosphatidate cytidylyltransferase 1248850..1249779 Yersinia pseudotuberculosis IP 32953 2953427 YP_069585.1 CDS YPTB1046 NC_006155.1 1249789 1250421 D similar to Yersinia pestis YPO2815 acyltransferase (100% evalue=1.E-120); Vibrio cholerae VC1937 conserved hypothetical protein (47.8% evalue=2.E-45); acyltransferase 1249789..1250421 Yersinia pseudotuberculosis IP 32953 2953428 YP_069586.1 CDS YPTB1047 NC_006155.1 1250418 1252181 D similar to Yersinia pestis YPO2814 conserved hypothetical protein (99.4% evalue=0); Escherichia coli ECs2012 hypothetical protein (66.2% evalue=0); hypothetical protein 1250418..1252181 Yersinia pseudotuberculosis IP 32953 2953429 YP_069587.1 CDS YPTB1048 NC_006155.1 1252174 1253493 D similar to Yersinia pestis YPO2813 ynbD; dual specificity phosphatase (99.5% evalue=0); Escherichia coli JW1408 ynbD; Hypothetical protein (49.5% evalue=1.E-114); dual specificity phosphatase 1252174..1253493 Yersinia pseudotuberculosis IP 32953 2953430 YP_069588.1 CDS YPTB1049 NC_006155.1 1253505 1253876 D similar to Yersinia pestis YPO2812 membrane protein (98.3% evalue=4.E-65); hypothetical protein 1253505..1253876 Yersinia pseudotuberculosis IP 32953 2953431 YP_069589.1 CDS YPTB1050 NC_006155.1 1253973 1254278 D similar to Yersinia pestis YPO2811 membrane protein (100% evalue=5.E-58); hypothetical protein 1253973..1254278 Yersinia pseudotuberculosis IP 32953 2953432 YP_069590.1 CDS YPTB1051 NC_006155.1 1254581 1255474 D similar to Yersinia pestis YPO2807 ptxR; LysR-family transcriptional regulatory protein (99.6% evalue=1.E-169); Xylella fastidiosa XF1752 transcriptional regulator (LysR family) (52.8% evalue=3.E-92); LysR family transcriptional regulator 1254581..1255474 Yersinia pseudotuberculosis IP 32953 2953433 YP_069591.1 CDS YPTB1052 NC_006155.1 1255529 1256518 R similar to Yersinia pestis YPO2806 aldo/keto reductase (100% evalue=0); Sinorhizobium meliloti SMa0563 aldehyde or keto oxidase, probable (64.3% evalue=1.E-113); aldo/keto reductase complement(1255529..1256518) Yersinia pseudotuberculosis IP 32953 2953434 YP_069592.1 CDS YPTB1053 NC_006155.1 1256544 1257395 R similar to Yersinia pestis YPO2805 aldo/keto reductase (99.6% evalue=1.E-161); Escherichia coli ECs0335 oxidoreductase (91.9% evalue=5.E-98); aldo/keto reductase complement(1256544..1257395) Yersinia pseudotuberculosis IP 32953 2953435 YP_069593.1 CDS YPTB1054 NC_006155.1 1257868 1259496 D similar to Yersinia pestis YPO2804 hypothetical protein (99.8% evalue=0); hypothetical protein 1257868..1259496 Yersinia pseudotuberculosis IP 32953 2953436 YP_069594.1 CDS bglB NC_006155.1 1259575 1261956 R similar to Yersinia pestis YPO2803 bglB; beta-glucosidase (98.2% evalue=0); Thermotoga maritima TM0025 beta-glucosidase (41.1% evalue=1.E-152); beta-glucosidase complement(1259575..1261956) Yersinia pseudotuberculosis IP 32953 2955284 YP_069595.1 CDS YPTB1056 NC_006155.1 1262112 1262642 R similar to Yersinia pestis YPO2802 membrane protein (97.7% evalue=2.E-93); Pasteurella multocida PM0986 unknown (32.9% evalue=8.E-16); hypothetical protein complement(1262112..1262642) Yersinia pseudotuberculosis IP 32953 2953437 YP_069596.1 CDS YPTB1057 NC_006155.1 1262635 1264842 R similar to Yersinia pestis YPO2801 membrane protein (99% evalue=0); Pasteurella multocida PM0986 unknown (25.7% evalue=3.E-13); hypothetical protein complement(1262635..1264842) Yersinia pseudotuberculosis IP 32953 2953438 YP_069597.1 CDS YPTB1058 NC_006155.1 1265226 1266098 D catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 1265226..1266098 Yersinia pseudotuberculosis IP 32953 2953439 YP_069598.1 CDS YPTB1059 NC_006155.1 1266316 1267437 D similar to Escherichia coli b1128 ycfD; hypothetical 42.6 kD protein in pepT-phoQ intergenic region (67.3% evalue=1.E-154); Escherichia coli JW1114 ycfD; Hypothetical protein (67.3% evalue=1.E-154); hypothetical protein 1266316..1267437 Yersinia pseudotuberculosis IP 32953 2953440 YP_069599.1 CDS YPTB1061 NC_006155.1 1268552 1270468 R similar to Yersinia pestis YPO3028 autotransporter (39.1% evalue=1.E-84); pertactin family virulence factor/autotransporter complement(1268552..1270468) Yersinia pseudotuberculosis IP 32953 2953442 YP_069600.1 CDS YPTB1062 NC_006155.1 1271277 1271516 D similar to Yersinia pestis YPO2795 hypothetical protein (100% evalue=4.E-38); hypothetical protein 1271277..1271516 Yersinia pseudotuberculosis IP 32953 2953443 YP_069601.1 CDS YPTB1063 NC_006155.1 1271555 1271806 D similar to Yersinia pestis YPO2794 hypothetical protein (98.7% evalue=2.E-40); hypothetical protein 1271555..1271806 Yersinia pseudotuberculosis IP 32953 2953444 YP_069602.1 CDS YPTB1064 NC_006155.1 1271830 1272309 D similar to Yersinia pestis YPO2962 conserved hypothetical protein (65.4% evalue=3.E-58); hypothetical protein 1271830..1272309 Yersinia pseudotuberculosis IP 32953 2953445 YP_069603.1 CDS YPTB1065 NC_006155.1 1272414 1272815 R similar to Yersinia pestis YPO2590 hypothetical protein, 100% identical; hypothetical protein complement(1272414..1272815) Yersinia pseudotuberculosis IP 32953 2953446 YP_069604.1 CDS YPTB1066 NC_006155.1 1273441 1274298 R similar to Yersinia pestis YPO2863 membrane protein (40% evalue=6.E-41); hypothetical protein complement(1273441..1274298) Yersinia pseudotuberculosis IP 32953 2953447 YP_069605.1 CDS sfsB NC_006155.1 1274971 1275216 D similar to Yersinia pestis YPO2785 sfsB, nlp, sfs7; DNA-binding protein (100% evalue=5.E-42); Salmonella typhi STY4673 cII; transcriptional regulatory protein (73.2% evalue=1.E-25); DNA-binding protein 1274971..1275216 Yersinia pseudotuberculosis IP 32953 2956602 YP_069606.1 CDS ponC NC_006155.1 1275429 1277792 R similar to Rickettsia conorii RC0249 pbpC; bifunctional penicillin-binding protein 1C (39.7% evalue=1.E-163); Pasteurella multocida PM0644 ponC; bifunctional penicillin-binding protein 1C (45.8% evalue=0); bifunctional penicillin-binding protein 1C complement(1275429..1277792) Yersinia pseudotuberculosis IP 32953 2956296 YP_069607.1 CDS YPTB1069 NC_006155.1 1277849 1283818 R similar to Yersinia pestis YPO2573 membrane protein (99.4% evalue=0); Pasteurella multocida PM0659 hypothetical R. prowazekii (38.4% evalue=0); hypothetical protein complement(1277849..1283818) Yersinia pseudotuberculosis IP 32953 2953448 YP_069608.1 CDS YPTB1070 NC_006155.1 1284480 1285334 R similar to Yersinia pestis YPO2576 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM4417 transcriptional regulator (62.8% evalue=2.E-89); hypothetical protein complement(1284480..1285334) Yersinia pseudotuberculosis IP 32953 2953449 YP_069609.1 CDS YPTB1071 NC_006155.1 1285676 1287202 D similar to Yersinia pestis YPO2577 methylmalonate-semialdehyde dehydrogenase (99.6% evalue=0); Salmonella typhimurium STM4421 NAD-dependent aldehyde dehydrogenase (63.8% evalue=0); methylmalonate-semialdehyde dehydrogenase 1285676..1287202 Yersinia pseudotuberculosis IP 32953 2953450 YP_069610.1 CDS YPTB1072 NC_006155.1 1287216 1289162 D similar to Yersinia pestis YPO2578 thiamine pyrophosphate-dependent protein (99.8% evalue=0); C. perfringens CPE0089 iolD; myo-inositol catabolism protein (56.2% evalue=0); thiamine pyrophosphate-dependent protein 1287216..1289162 Yersinia pseudotuberculosis IP 32953 2953451 YP_069611.1 CDS YPTB1073 NC_006155.1 1289456 1290442 D similar to Agrobacterium tumefaciens Atu4012 idhA; myo-inositol 2-dehydrogenase (48.9% evalue=1.E-81); Agrobacterium tumefaciens AGR_L_1682 myo-inositol 2-dehydrogenase (48.9% evalue=1.E-81); myo-inositol 2-dehydrogenase 1289456..1290442 Yersinia pseudotuberculosis IP 32953 2953452 YP_069612.1 CDS YPTB1074 NC_006155.1 1290568 1291497 D similar to Yersinia pestis YPO2581 sugar-binding periplasmic protein (100% evalue=1.E-171); Caulobacter crescentus CC0859 sugar ABC transporter, periplasmic sugar-binding protein (41% evalue=3.E-63); sugar ABC transporter substrate-binding protein 1290568..1291497 Yersinia pseudotuberculosis IP 32953 2953453 YP_069613.1 CDS YPTB1075 NC_006155.1 1291546 1293093 D similar to Yersinia pestis YPO2582 sugar transport ATP-binding protein (99% evalue=0); Caulobacter crescentus CC0860 sugar ABC transporter, ATP-binding protein (52.1% evalue=1.E-135); sugar ABC transporter ATP-binding protein 1291546..1293093 Yersinia pseudotuberculosis IP 32953 2953454 YP_069614.1 CDS YPTB1076 NC_006155.1 1293105 1294133 D similar to Yersinia pestis YPO2583 sugar transport system permease (100% evalue=0); Caulobacter crescentus CC0861 sugar ABC transporter, permease (54.8% evalue=1.E-101); sugar ABC transporter permease 1293105..1294133 Yersinia pseudotuberculosis IP 32953 2953455 YP_069615.1 CDS YPTB1077 NC_006155.1 1294157 1295290 D similar to Yersinia pestis YPO2584 conserved hypothetical protein (99.2% evalue=0); Sinorhizobium meliloti SMc01163 oxidoreductase (46.5% evalue=2.E-92); hypothetical protein 1294157..1295290 Yersinia pseudotuberculosis IP 32953 2953456 YP_069616.1 CDS YPTB1078 NC_006155.1 1295339 1297309 D similar to Yersinia pestis YPO2585 carbohydrate kinase (99.6% evalue=0); Ralstonia solanacearum RS02748 iolC, RSc1240; probable transferase kinase (55.5% evalue=0); carbohydrate kinase 1295339..1297309 Yersinia pseudotuberculosis IP 32953 2953457 YP_069617.1 CDS YPTB1079 NC_006155.1 1297516 1298436 D similar to Yersinia pestis YPO2586 conserved hypothetical protein (99.3% evalue=1.E-176); Mesorhizobium loti mlr2437 rhizopine catabolism protein MocC (52% evalue=1.E-87); hypothetical protein 1297516..1298436 Yersinia pseudotuberculosis IP 32953 2953458 YP_069618.1 CDS YPTB1080 NC_006155.1 1298446 1299261 D similar to Yersinia pestis YPO2587 conserved hypothetical protein (98.8% evalue=1.E-161); Salmonella typhimurium STM4420 inner membrane protein (64% evalue=2.E-96); hypothetical protein 1298446..1299261 Yersinia pseudotuberculosis IP 32953 2953459 YP_069619.1 CDS YPTB1081 NC_006155.1 1299464 1299766 R hypothetical protein complement(1299464..1299766) Yersinia pseudotuberculosis IP 32953 2953460 YP_069620.1 CDS YPTB1082 NC_006155.1 1299831 1301621 D similar to Yersinia pestis YPO2588 ABC transport protein (100% evalue=0); Ralstonia solanacearum RS04417 probable composite ATP-binding transmembrane ABC transporter protein (53.8% evalue=1.E-180); ABC transporter 1299831..1301621 Yersinia pseudotuberculosis IP 32953 2953461 YP_069621.1 CDS YPTB1083 NC_006155.1 1301637 1301924 R similar to Yersinia pestis YPO2589 conserved hypothetical protein (100% evalue=8.E-52); Clostridium acetobutylicum CAC3394 uncharacterized conserved protein, YGIN family (40% evalue=1.E-11); hypothetical protein complement(1301637..1301924) Yersinia pseudotuberculosis IP 32953 2953462 YP_069622.1 CDS YPTB1084 NC_006155.1 1302579 1302758 R similar to Yersinia pestis YPO2591 hypothetical protein (75% evalue=1.E-16); hypothetical protein complement(1302579..1302758) Yersinia pseudotuberculosis IP 32953 2953463 YP_069623.1 CDS YPTB1085 NC_006155.1 1302940 1303905 R similar to Yersinia pestis YPO4045 membrane protein (24% evalue=2.E-08); hypothetical protein complement(1302940..1303905) Yersinia pseudotuberculosis IP 32953 2953464 YP_069624.1 CDS YPTB1086 NC_006155.1 1304328 1304945 D similar to Yersinia pestis YPO2593 LuxR-family regulatory proteins (100% evalue=1.E-111); LuxR family transcriptional regulator 1304328..1304945 Yersinia pseudotuberculosis IP 32953 2953465 YP_069625.1 CDS YPTB1087 NC_006155.1 1305225 1305716 R similar to Yersinia pestis YPO2594 hypothetical protein (99.1% evalue=5.E-62); hypothetical protein complement(1305225..1305716) Yersinia pseudotuberculosis IP 32953 2953466 YP_069626.1 CDS cspE NC_006155.1 1305983 1306192 D member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 1305983..1306192 Yersinia pseudotuberculosis IP 32953 2955374 YP_069627.1 CDS ccrB NC_006155.1 1306615 1306998 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1306615..1306998) Yersinia pseudotuberculosis IP 32953 2955356 YP_069628.1 CDS tatE NC_006155.1 1307565 1307822 D TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 1307565..1307822 Yersinia pseudotuberculosis IP 32953 2956665 YP_069629.1 CDS lipA NC_006155.1 1308003 1308968 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1308003..1308968) Yersinia pseudotuberculosis IP 32953 2955949 YP_069630.2 CDS lipB NC_006155.1 1309161 1309850 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(1309161..1309850) Yersinia pseudotuberculosis IP 32953 2955950 YP_069631.1 CDS YPTB1093 NC_006155.1 1310074 1310337 R similar to Yersinia pestis YPO2600 conserved hypothetical protein (100% evalue=2.E-44); Salmonella typhimurium STM0636 ybeD; cytoplasmic protein (83.9% evalue=7.E-37); hypothetical protein complement(1310074..1310337) Yersinia pseudotuberculosis IP 32953 2953467 YP_069632.1 CDS dacA NC_006155.1 1310535 1311737 R penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase complement(1310535..1311737) Yersinia pseudotuberculosis IP 32953 2955419 YP_069633.1 CDS rlpA NC_006155.1 1312140 1313222 R similar to Yersinia pestis YPO2602 rlpA; rare lipoprotein A precursor (100% evalue=0); Salmonella typhimurium STM0638 rlpA; a minor lipoprotein (55% evalue=1.E-100); rare lipoprotein A complement(1312140..1313222) Yersinia pseudotuberculosis IP 32953 2956460 YP_069634.1 CDS rodA NC_006155.1 1313232 1314344 R similar to Yersinia pestis YPO2603 rodA, mrdB; rod shape-determining protein (100% evalue=0); Escherichia coli Z0780 mrdB; rod shape-determining membrane protein (85.9% evalue=0); cell wall shape-determining protein complement(1313232..1314344) Yersinia pseudotuberculosis IP 32953 2956478 YP_069635.1 CDS pbpA NC_006155.1 1314530 1316425 R similar to Yersinia pestis YPO2604 pbpA, mrdA; penicillin-binding protein 2 (99.5% evalue=0); Salmonella typhimurium STM0640 mrdA; cell elongation specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) (80.7% evalue=0); penicillin-binding protein 2 complement(1314530..1316425) Yersinia pseudotuberculosis IP 32953 2956214 YP_069636.1 CDS YPTB1098 NC_006155.1 1316507 1316977 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1316507..1316977) Yersinia pseudotuberculosis IP 32953 2953468 YP_069637.1 CDS YPTB1099 NC_006155.1 1316981 1317298 R similar to Yersinia pestis YPO2606 conserved hypothetical protein (99% evalue=4.E-54); Salmonella typhimurium STM0642 ybeB; ACR, homolog of plant Iojap protein (84.7% evalue=2.E-48); hypothetical protein complement(1316981..1317298) Yersinia pseudotuberculosis IP 32953 2953469 YP_069638.1 CDS nadD NC_006155.1 1317521 1318183 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(1317521..1318183) Yersinia pseudotuberculosis IP 32953 2956116 YP_069639.1 CDS holA NC_006155.1 1318173 1319207 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1318173..1319207) Yersinia pseudotuberculosis IP 32953 2955818 YP_069640.1 CDS rlpB NC_006155.1 1319204 1319827 R rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB complement(1319204..1319827) Yersinia pseudotuberculosis IP 32953 2956461 YP_069641.1 CDS leuS NC_006155.1 1319842 1322424 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1319842..1322424) Yersinia pseudotuberculosis IP 32953 2955944 YP_069642.1 CDS YPTB1104 NC_006155.1 1322686 1323168 D similar to Yersinia pestis YPO2611 conserved hypothetical protein (100% evalue=1.E-90); Salmonella typhi STY0704 ybeL; conserved hypothetical protein (79.3% evalue=2.E-72); hypothetical protein 1322686..1323168 Yersinia pseudotuberculosis IP 32953 2953470 YP_069643.1 CDS gltL NC_006155.1 1323302 1324027 R similar to Yersinia pestis YPO2612 gltL; glutamate/aspartate transport ATP-binding protein (100% evalue=1.E-133); Salmonella typhi STY0707 gltL; glutamate/aspartate transport ATP-binding protein GltL (87.9% evalue=1.E-118); glutamate/aspartate ABC transporter ATP-binding protein gltL complement(1323302..1324027) Yersinia pseudotuberculosis IP 32953 2955721 YP_069644.1 CDS gltK NC_006155.1 1324027 1324701 R similar to Yersinia pestis YPO2613 gltK; glutamate/aspartate transport system permease (100% evalue=1.E-119); Salmonella typhi STY0708 gltK; glutamate/aspartate transport system permease GltK (87.5% evalue=1.E-107); glutamate/aspartate ABC transporter permease gltK complement(1324027..1324701) Yersinia pseudotuberculosis IP 32953 2955720 YP_069645.1 CDS gltJ NC_006155.1 1324701 1325441 R similar to Yersinia pestis YPO2614 gltJ; glutamate/aspartate transport system permease (99.5% evalue=1.E-138); Salmonella typhi STY0709 gltJ; glutamate/aspartate transport system permease GltJ (86.9% evalue=1.E-122); glutamate/aspartate ABC transporter permease gltJ complement(1324701..1325441) Yersinia pseudotuberculosis IP 32953 2955719 YP_069646.1 CDS ybeJ NC_006155.1 1325615 1326532 R similar to Yersinia pestis YPO2615 glnH; amino acid-binding protein precursor (100% evalue=1.E-170); Salmonella typhimurium STM0665 gltI; ABC superfamily (bind_prot), glutamate/aspartate transporter (79.6% evalue=1.E-137); glutamate and aspartate transporter subunit complement(1325615..1326532) Yersinia pseudotuberculosis IP 32953 2956964 YP_069647.1 CDS lnt NC_006155.1 1327281 1328828 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(1327281..1328828) Yersinia pseudotuberculosis IP 32953 2955380 YP_069648.1 CDS CorC NC_006155.1 1328836 1329714 R similar to Yersinia pestis YPO2617 ybeX; membrane protein (100% evalue=1.E-165); Escherichia coli JW0655 ybeX; Hypothteical protein (86.6% evalue=1.E-144); magnesium/cobalt efflux protein CorC complement(1328836..1329714) Yersinia pseudotuberculosis IP 32953 2955351 YP_069649.1 CDS YPTB1111 NC_006155.1 1329832 1330305 R similar to Yersinia pestis YPO2618 conserved hypothetical protein (98.7% evalue=7.E-87); Salmonella typhi STY0714 conserved hypothetical protein (79.8% evalue=2.E-67); metalloprotease complement(1329832..1330305) Yersinia pseudotuberculosis IP 32953 2953471 YP_069650.1 CDS YPTB1112 NC_006155.1 1330302 1331414 R similar to Yersinia pestis YPO2619 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0698 ATP-binding protein in pho regulon (87.2% evalue=1.E-172); hypothetical protein complement(1330302..1331414) Yersinia pseudotuberculosis IP 32953 2953472 YP_069651.1 CDS miaB NC_006155.1 1331702 1333126 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1331702..1333126) Yersinia pseudotuberculosis IP 32953 2956042 YP_069652.1 CDS ubiF NC_006155.1 1333368 1334549 D catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1333368..1334549 Yersinia pseudotuberculosis IP 32953 2956853 YP_069653.1 CDS asnB NC_006155.1 1336039 1337703 R functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B complement(1336039..1337703) Yersinia pseudotuberculosis IP 32953 2955243 YP_069654.1 CDS nagD NC_006155.1 1338058 1338810 R similar to Yersinia pestis YPO2624 nagD; N-acetylglucosamine metabolism protein (100% evalue=1.E-142); Escherichia coli Z0822 nagD; N-acetylglucosamine metabolism (86% evalue=1.E-126); UMP phosphatase complement(1338058..1338810) Yersinia pseudotuberculosis IP 32953 2956122 YP_069655.1 CDS nagC NC_006155.1 1338883 1340109 R similar to Yersinia pestis YPO2625 nagC, nagR; N-acetylglucosamine regulatory protein (99.7% evalue=0); Salmonella typhi STY0720 nagC; N-acetylglucosamine repressor (77.3% evalue=0); N-acetylglucosamine regulatory protein complement(1338883..1340109) Yersinia pseudotuberculosis IP 32953 2956121 YP_069656.1 CDS nagA NC_006155.1 1340126 1341271 R catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase complement(1340126..1341271) Yersinia pseudotuberculosis IP 32953 2956119 YP_069657.1 CDS nagB NC_006155.1 1341291 1342091 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(1341291..1342091) Yersinia pseudotuberculosis IP 32953 2956120 YP_069658.1 CDS nagE NC_006155.1 1342490 1344523 D similar to Yersinia pestis YPO2628 nagE, pstN; pts system, N-acetylglucosamine-specific IIABC component (99.8% evalue=0); Pasteurella multocida PM0876 PTS system, N-acetylglucosamine-specific II component (65.9% evalue=0); PTS system N-acetylglucosamine-specific transporter subunit IIABC 1342490..1344523 Yersinia pseudotuberculosis IP 32953 2956123 YP_069659.1 CDS glnS NC_006155.1 1344738 1346405 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1344738..1346405 Yersinia pseudotuberculosis IP 32953 2955703 YP_069660.1 CDS YPTB1122 NC_006155.1 1347111 1348532 D similar to Yersinia pestis YPO2631 ybfM; exported protein (99.3% evalue=0); Escherichia coli JW0667 ybfM; Hypothteical protein (68.5% evalue=0); outermembrane porin 1347111..1348532 Yersinia pseudotuberculosis IP 32953 2953473 YP_069661.1 CDS YPTB1123 NC_006155.1 1348860 1351535 D similar to Vibrio cholerae VC2217 beta-N-acetylhexosaminidase (57.2% evalue=0); Caulobacter crescentus CC0447 beta-N-acetylhexosaminidase, (25.7% evalue=2.E-39); beta-N-acetylhexosaminidase 1348860..1351535 Yersinia pseudotuberculosis IP 32953 2953474 YP_069662.1 CDS fur NC_006155.1 1351976 1352422 R negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator complement(1351976..1352422) Yersinia pseudotuberculosis IP 32953 2955666 YP_069663.1 CDS fldA NC_006155.1 1352789 1353316 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA complement(1352789..1353316) Yersinia pseudotuberculosis IP 32953 2955555 YP_069664.1 CDS YPTB1126 NC_006155.1 1353389 1353637 R hypothetical protein complement(1353389..1353637) Yersinia pseudotuberculosis IP 32953 2953475 YP_069665.1 CDS YPTB1127 NC_006155.1 1353753 1354040 R similar to Yersinia pestis YPO2637 conserved hypothetical protein (100% evalue=9.E-48); Escherichia coli b0685 ybfE; hypothetical 13.9 kD protein in fldA-seqA intergenic region (86.5% evalue=5.E-38); LexA regulated protein complement(1353753..1354040) Yersinia pseudotuberculosis IP 32953 2953476 YP_069666.1 CDS YPTB1128 NC_006155.1 1354372 1355139 R similar to Yersinia pestis YPO2638 conserved hypothetical protein (99.2% evalue=1.E-144); Escherichia coli b0686 ybfF; esterase/lipase ybff (66.4% evalue=1.E-97); hypothetical protein complement(1354372..1355139) Yersinia pseudotuberculosis IP 32953 2953477 YP_069667.1 CDS trp1400A NC_006155.1 1356532 1356795 R similar to Yersinia pestis YPO2640 trp1400A; IS1400 transposase A (100% evalue=8.E-44); Salmonella typhimurium STM2765 transposase (70.9% evalue=7.E-30); IS1400 transposase complement(1356532..1356795) Yersinia pseudotuberculosis IP 32953 2956824 YP_069668.1 CDS YPTB1132 NC_006155.1 1357127 1358149 D similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 1357127..1358149 Yersinia pseudotuberculosis IP 32953 2953479 YP_069669.1 CDS YPTB1133 NC_006155.1 1358149 1358928 D similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 1358149..1358928 Yersinia pseudotuberculosis IP 32953 2953480 YP_069670.1 CDS smpB NC_006155.1 1359940 1360422 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1359940..1360422) Yersinia pseudotuberculosis IP 32953 2956616 YP_069671.1 CDS YPTB1136 NC_006155.1 1360583 1361017 D similar to Yersinia pestis YPO1102 conserved hypothetical protein (100% evalue=3.E-78); Escherichia coli Z3912 hypothetical protein (79.1% evalue=2.E-63); hypothetical protein 1360583..1361017 Yersinia pseudotuberculosis IP 32953 2953482 YP_069672.1 CDS YPTB1137 NC_006155.1 1361010 1361294 D similar to Yersinia pestis YPO1103 conserved hypothetical protein (98.9% evalue=3.E-46); Escherichia coli b2618 hypothetical protein (76.4% evalue=3.E-32); hypothetical protein 1361010..1361294 Yersinia pseudotuberculosis IP 32953 2953483 YP_069673.2 CDS YPTB1138 NC_006155.1 1361444 1361785 R similar to Yersinia pestis YPO1104 conserved hypothetical protein (100% evalue=4.E-61); Salmonella typhimurium STM2685 smpA; small membrane protein A (80.1% evalue=1.E-48); hypothetical protein complement(1361444..1361785) Yersinia pseudotuberculosis IP 32953 2953484 YP_069674.1 CDS RecN NC_006155.1 1361899 1363578 R similar to Yersinia pestis YPO1105 DNA repair protein RecN (99.8% evalue=0); Escherichia coli JW2597 recN; DNA repair protein RecN (recombination protein n) (74.5% evalue=0); recombination and repair protein complement(1361899..1363578) Yersinia pseudotuberculosis IP 32953 2956419 YP_069675.1 CDS ppnK NC_006155.1 1363647 1364528 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1363647..1364528) Yersinia pseudotuberculosis IP 32953 2953485 YP_069676.1 CDS GrpE NC_006155.1 1364652 1365230 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1364652..1365230 Yersinia pseudotuberculosis IP 32953 2955747 YP_069677.1 CDS gltA NC_006155.1 1365338 1366618 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1365338..1366618) Yersinia pseudotuberculosis IP 32953 2955716 YP_069678.1 CDS sdhC NC_006155.1 1367328 1367717 D similar to Yersinia pestis YPO1109 sdhC, cybA; succinate dehydrogenase cytochrome b-556 subunit (99.2% evalue=3.E-67); Escherichia coli b0721 sdhC, cybA; succinate dehydrogenase cytochrome b-556 subunit (77.1% evalue=2.E-51); succinate dehydrogenase cytochrome b556 large membrane subunit 1367328..1367717 Yersinia pseudotuberculosis IP 32953 2956579 YP_069679.1 CDS sdhD NC_006155.1 1367711 1368058 D similar to Yersinia pestis YPO1110 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein (100% evalue=2.E-60); Escherichia coli b0722 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein (69.2% evalue=3.E-44); succinate dehydrogenase cytochrome b556 small membrane subunit 1367711..1368058 Yersinia pseudotuberculosis IP 32953 2956580 YP_069680.1 CDS sdhA NC_006155.1 1368059 1369825 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1368059..1369825 Yersinia pseudotuberculosis IP 32953 2956577 YP_069681.1 CDS sdhB NC_006155.1 1369875 1370591 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1369875..1370591 Yersinia pseudotuberculosis IP 32953 2956578 YP_069682.1 CDS sucA NC_006155.1 1370947 1373754 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 1370947..1373754 Yersinia pseudotuberculosis IP 32953 2956645 YP_069683.1 CDS sucB NC_006155.1 1373784 1375007 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1373784..1375007 Yersinia pseudotuberculosis IP 32953 2956646 YP_069684.1 CDS sucC NC_006155.1 1375120 1376286 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1375120..1376286 Yersinia pseudotuberculosis IP 32953 2956647 YP_069685.1 CDS sucD NC_006155.1 1376286 1377158 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1376286..1377158 Yersinia pseudotuberculosis IP 32953 2956648 YP_069686.1 CDS cydA NC_006155.1 1377926 1379494 D similar to Yersinia pestis YPO1117 cydA; cytochrome D ubiquinol oxidase subunit I (100% evalue=0); Escherichia coli ECs0768 cytochrome bd-I oxidase subunit I (86.5% evalue=0); cytochrome D ubiquinol oxidase subunit I 1377926..1379494 Yersinia pseudotuberculosis IP 32953 2955389 YP_069687.1 CDS cydB NC_006155.1 1379509 1380648 D similar to Yersinia pestis YPO1118 cydB; cytochrome D ubiquinol oxidase subunit II (100% evalue=0); Salmonella typhi STY0787 cydB; cytochrome d ubiquinol oxidase subunit II (79.4% evalue=0); cytochrome D ubiquinol oxidase subunit II 1379509..1380648 Yersinia pseudotuberculosis IP 32953 2955390 YP_069688.1 CDS YPTB1153 NC_006155.1 1380661 1380795 D similar to Salmonella typhi STY0788 membrane protein (89.6% evalue=1.E-08); Escherichia coli JW0724 ybgT, ybgE; Hypothetical protein (ORFC) (76.4% evalue=4.E-09); hypothetical protein 1380661..1380795 Yersinia pseudotuberculosis IP 32953 2953486 YP_069689.1 CDS YPTB1154 NC_006155.1 1380785 1381072 D similar to Yersinia pestis YPO1119 conserved hypothetical protein (100% evalue=1.E-50); Escherichia coli ECs0770 hypothetical protein (59.5% evalue=4.E-27); hypothetical protein 1380785..1381072 Yersinia pseudotuberculosis IP 32953 2953487 YP_069690.1 CDS YPTB1155 NC_006155.1 1381204 1381605 D catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase 1381204..1381605 Yersinia pseudotuberculosis IP 32953 2953488 YP_069691.1 CDS tolQ NC_006155.1 1381605 1382291 D membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1381605..1382291 Yersinia pseudotuberculosis IP 32953 2956721 YP_069692.1 CDS tolR NC_006155.1 1382304 1382732 D membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1382304..1382732 Yersinia pseudotuberculosis IP 32953 2956722 YP_069693.1 CDS tolA NC_006155.1 1382844 1384010 D inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1382844..1384010 Yersinia pseudotuberculosis IP 32953 2956719 YP_069694.1 CDS tolB NC_006155.1 1384130 1385422 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1384130..1385422 Yersinia pseudotuberculosis IP 32953 2956720 YP_069695.1 CDS pal NC_006155.1 1385473 1385979 D similar to Yersinia pestis YPO1125 pal, excC; peptidoglycan-associated lipoprotein Pal (99.4% evalue=2.E-89); Escherichia coli JW0731 pal; Peptidoglycan-associated lipoprotein precursor (83.8% evalue=5.E-75); peptidoglycan-associated outer membrane lipoprotein 1385473..1385979 Yersinia pseudotuberculosis IP 32953 2956206 YP_069696.1 CDS YPTB1161 NC_006155.1 1385989 1386798 D periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 1385989..1386798 Yersinia pseudotuberculosis IP 32953 2953489 YP_069697.1 CDS nadA NC_006155.1 1388174 1389235 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1388174..1389235 Yersinia pseudotuberculosis IP 32953 2956113 YP_069698.1 CDS pnuC NC_006155.1 1389357 1390082 D similar to Yersinia pestis YPO1128 pnuC; intergral membrane NMN transport protein PnuC (100% evalue=1.E-138); Salmonella typhimurium STM0757 pnuC; NMN family, nucleoside/purine/pyrimidine transporter (77.3% evalue=1.E-104); intergral membrane NMN transport protein PnuC 1389357..1390082 Yersinia pseudotuberculosis IP 32953 2956293 YP_069699.1 CDS YPTB1164 NC_006155.1 1390197 1391135 R involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB complement(1390197..1391135) Yersinia pseudotuberculosis IP 32953 2953490 YP_069700.1 CDS aroG NC_006155.1 1391602 1392654 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1391602..1392654 Yersinia pseudotuberculosis IP 32953 2955226 YP_069701.1 CDS gpmA NC_006155.1 1392836 1393588 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(1392836..1393588) Yersinia pseudotuberculosis IP 32953 2955739 YP_069702.1 CDS psiF NC_006155.1 1393935 1394270 R similar to Yersinia pestis YPO1134 psiF; starvation-inducible protein (99% evalue=2.E-58); Salmonella typhimurium STM0384 psiF; induced by phosphate starvation (53.5% evalue=9.E-26); starvation-inducible protein complement(1393935..1394270) Yersinia pseudotuberculosis IP 32953 2956339 YP_069703.1 CDS galM NC_006155.1 1394563 1395633 R catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase complement(1394563..1395633) Yersinia pseudotuberculosis IP 32953 2955672 YP_069704.1 CDS galK NC_006155.1 1395627 1396778 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(1395627..1396778) Yersinia pseudotuberculosis IP 32953 2955671 YP_069705.1 CDS galT NC_006155.1 1396775 1397827 R catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase complement(1396775..1397827) Yersinia pseudotuberculosis IP 32953 2955674 YP_069706.1 CDS galE NC_006155.1 1397837 1398853 R similar to Yersinia pestis YPO1139 galE, galD; UDP-glucose 4-epimerase (99.4% evalue=0); Escherichia coli b0759 galE, galD; UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) (76.3% evalue=1.E-151); UDP-galactose-4-epimerase complement(1397837..1398853) Yersinia pseudotuberculosis IP 32953 2955669 YP_069707.1 CDS YPTB1172 NC_006155.1 1399213 1400031 R similar to Yersinia pestis YPO1140 membrane protein (100% evalue=1.E-153); Pseudomonas aeruginosa PA5132 hypothetical protein (62.7% evalue=1.E-93); hypothetical protein complement(1399213..1400031) Yersinia pseudotuberculosis IP 32953 2953491 YP_069708.1 CDS modF NC_006155.1 1400248 1401738 R contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF complement(1400248..1401738) Yersinia pseudotuberculosis IP 32953 2956064 YP_069709.1 CDS modE NC_006155.1 1401848 1402639 R represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE complement(1401848..1402639) Yersinia pseudotuberculosis IP 32953 2956063 YP_069710.1 CDS YPTB1175 NC_006155.1 1402871 1403023 D hypothetical protein 1402871..1403023 Yersinia pseudotuberculosis IP 32953 2953492 YP_069711.1 CDS modA NC_006155.1 1403258 1404037 D with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1403258..1404037 Yersinia pseudotuberculosis IP 32953 2956060 YP_069712.1 CDS modB NC_006155.1 1404037 1404732 D part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1404037..1404732 Yersinia pseudotuberculosis IP 32953 2956061 YP_069713.1 CDS modC NC_006155.1 1404726 1405805 D Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1404726..1405805 Yersinia pseudotuberculosis IP 32953 2956062 YP_069714.1 CDS YPTB1179 NC_006155.1 1405861 1406682 R YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase complement(1405861..1406682) Yersinia pseudotuberculosis IP 32953 2953493 YP_069715.1 CDS YPTB1180 NC_006155.1 1406973 1407977 D catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1406973..1407977 Yersinia pseudotuberculosis IP 32953 2953494 YP_069716.1 CDS bioA NC_006155.1 1408162 1409442 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1408162..1409442) Yersinia pseudotuberculosis IP 32953 2955285 YP_069717.1 CDS bioB NC_006155.1 1409541 1410578 D similar to Yersinia pestis YPO1151 bioB; biotin synthase (100% evalue=0); Escherichia coli JW0758 bioB; biotin synthetase (84.5% evalue=1.E-170); biotin synthase 1409541..1410578 Yersinia pseudotuberculosis IP 32953 2955286 YP_069718.1 CDS bioF NC_006155.1 1410578 1411729 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1410578..1411729 Yersinia pseudotuberculosis IP 32953 2955290 YP_069719.1 CDS bioC NC_006155.1 1411713 1412516 D similar to Yersinia pestis YPO1153 bioC; biotin synthesis protein BioC (99.6% evalue=1.E-155); Salmonella typhimurium STM0796 bioC; biotin biosynthesis; reaction prior to pimeloyl CoA (50.4% evalue=3.E-61); biotin synthesis protein BioC 1411713..1412516 Yersinia pseudotuberculosis IP 32953 2955287 YP_069720.1 CDS bioD NC_006155.1 1412509 1413231 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1412509..1413231 Yersinia pseudotuberculosis IP 32953 2955288 YP_069721.1 CDS YPTB1186 NC_006155.1 1413459 1414169 R similar to Yersinia pestis YPO1155 amino acid transporter (100% evalue=1.E-135); Ralstonia solanacearum RS03602 probable ATP-binding ABC transporter protein (46.3% evalue=5.E-51); branched-chain amino acid ABC transporter ATP-binding protein complement(1413459..1414169) Yersinia pseudotuberculosis IP 32953 2953495 YP_069722.1 CDS uvrB NC_006155.1 1415260 1417275 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1415260..1417275 Yersinia pseudotuberculosis IP 32953 2956882 YP_069723.1 CDS YPTB1188 NC_006155.1 1417586 1417831 D similar to Yersinia pestis YPO1157 conserved hypothetical protein (100% evalue=5.E-42); Vibrio cholerae VC1816 hypothetical protein (70.4% evalue=4.E-21); hypothetical protein 1417586..1417831 Yersinia pseudotuberculosis IP 32953 2953496 YP_069724.1 CDS YPTB1189 NC_006155.1 1417962 1418885 R similar to Yersinia pestis YPO1158 conserved hypothetical protein (100% evalue=1.E-169); Salmonella typhimurium STM0801 ybhK; cytoplasmic protein (79.4% evalue=1.E-133); hypothetical protein complement(1417962..1418885) Yersinia pseudotuberculosis IP 32953 2953497 YP_069725.1 CDS moaA NC_006155.1 1419417 1420397 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1419417..1420397 Yersinia pseudotuberculosis IP 32953 2956054 YP_069726.1 CDS moaC NC_006155.1 1420620 1421099 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1420620..1421099 Yersinia pseudotuberculosis IP 32953 2956055 YP_069727.1 CDS moaD NC_006155.1 1421096 1421341 D catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 1421096..1421341 Yersinia pseudotuberculosis IP 32953 2956056 YP_069728.1 CDS moaE NC_006155.1 1421341 1421796 D catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 1421341..1421796 Yersinia pseudotuberculosis IP 32953 2956057 YP_069729.1 CDS YPTB1194 NC_006155.1 1421939 1422649 D similar to Yersinia pestis YPO1163 membrane protein (99.5% evalue=1.E-129); Salmonella typhimurium STM0807 ybhL; permease (76.6% evalue=2.E-97); stationary phase anti-death family (SAD), acetate uptake 1421939..1422649 Yersinia pseudotuberculosis IP 32953 2953498 YP_069730.1 CDS betA NC_006155.1 1422860 1424563 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(1422860..1424563) Yersinia pseudotuberculosis IP 32953 2955276 YP_069731.1 CDS betB NC_006155.1 1424586 1426058 R catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase complement(1424586..1426058) Yersinia pseudotuberculosis IP 32953 2955277 YP_069732.1 CDS betI NC_006155.1 1426116 1426712 R HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI complement(1426116..1426712) Yersinia pseudotuberculosis IP 32953 2955278 YP_069733.1 CDS betT NC_006155.1 1427078 1429126 D proton-motive-force-driven choline transporter; choline transport protein BetT 1427078..1429126 Yersinia pseudotuberculosis IP 32953 2955279 YP_069734.1 CDS YPTB1199 NC_006155.1 1429367 1430260 D similar to Yersinia pestis YPO1169 LysR-family regulatory protein (100% evalue=1.E-169); Salmonella typhi STY2655 xapR; xanthosine operon transcriptional regulator (39.3% evalue=2.E-52); DNA-binding transcriptional activator XapR 1429367..1430260 Yersinia pseudotuberculosis IP 32953 2953499 YP_069735.1 CDS YPTB1200 NC_006155.1 1430298 1431179 R similar to Yersinia pestis YPO1170 membrane protein (98.9% evalue=1.E-159); Bacillus subtilis BG10039 yyaM; similar to unknown proteins (20.1% evalue=4.E-19); DMT superfamily drug/metabolite efflux pump complement(1430298..1431179) Yersinia pseudotuberculosis IP 32953 2953500 YP_069736.1 CDS xapA NC_006155.1 1431492 1432355 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 1431492..1432355 Yersinia pseudotuberculosis IP 32953 2956904 YP_069737.1 CDS xapB NC_006155.1 1432494 1433750 D similar to Escherichia coli b2406 xapB; xanthosine permease (xanthosine transporter) (65.5% evalue=1.E-163); Escherichia coli JW2397 xapB; Xanthosine permease (xanthosine transporter) (65.5% evalue=1.E-163); major facilitator superfamily xanthosine permease 1432494..1433750 Yersinia pseudotuberculosis IP 32953 2956905 YP_069738.1 CDS zraP NC_006155.1 1433838 1434311 R similar to Salmonella typhi STY3713 possible exported protein (36% evalue=2.E-17); Salmonella typhimurium STM4172 zraP; zinc-resistance associated protein (36% evalue=2.E-17); zinc resistance protein complement(1433838..1434311) Yersinia pseudotuberculosis IP 32953 2953501 YP_069739.1 CDS YPTB1204 NC_006155.1 1434661 1436475 D similar to Salmonella typhi STY3712 hydH; two-component system sensor protein (56.4% evalue=4.E-70); two component histidine kinase-sensor 1434661..1436475 Yersinia pseudotuberculosis IP 32953 2953502 YP_069740.1 CDS hydG NC_006155.1 1436462 1437826 D similar to Escherichia coli b4004 hydG; transcriptional regulatory protein hydG (63.9% evalue=1.E-160); Escherichia coli JW3968 hydG; Transcriptional regulatory protein HydG. (63.9% evalue=1.E-160); transcriptional regulator hydG 1436462..1437826 Yersinia pseudotuberculosis IP 32953 2955857 YP_069741.1 CDS morB NC_006155.1 1438174 1439283 D similar to Ralstonia solanacearum RS02674 probable flavoprotein NADH-dependent oxidoreductase (51.2% evalue=5.E-96); Pseudomonas aeruginosa PA2932 morB; morphinone reductase (50.2% evalue=2.E-96); morphinone reductase 1438174..1439283 Yersinia pseudotuberculosis IP 32953 2956067 YP_069742.1 CDS YPTB1207 NC_006155.1 1439284 1440195 R similar to Sinorhizobium meliloti SMc01817 transcription regulator protein (42.7% evalue=3.E-60); Mesorhizobium loti mlr2579 probable transcriptional regulator (46.2% evalue=4.E-65); LysR family transcriptional regulator complement(1439284..1440195) Yersinia pseudotuberculosis IP 32953 2953503 YP_069743.1 CDS YPTB1208 NC_006155.1 1440765 1441091 D hypothetical protein 1440765..1441091 Yersinia pseudotuberculosis IP 32953 2953504 YP_069744.1 CDS YPTB1209 NC_006155.1 1441130 1442236 R similar to Escherichia coli ECs0870 hypothetical protein (85.5% evalue=1.E-178); Escherichia coli b0792 ybhR; ABC-2 type transport system permease (85.5% evalue=1.E-178); multidrug ABC transporter permease complement(1441130..1442236) Yersinia pseudotuberculosis IP 32953 2953505 YP_069745.1 CDS YPTB1210 NC_006155.1 1442249 1443424 R similar to Salmonella typhi STY0851 inner membrane protein (79.5% evalue=1.E-164); Salmonella typhimurium STM0816 ybhS; ABC superfamily (membrane) transport protein (79.5% evalue=1.E-164); multidrug ABC transporter permease complement(1442249..1443424) Yersinia pseudotuberculosis IP 32953 2953506 YP_069746.1 CDS YPTB1211 NC_006155.1 1443429 1445171 R similar to Escherichia coli b0794 ybhF; ABC-2 type transport system ATP-binding protein (74.5% evalue=0); Escherichia coli JW0778 yhiG; Hypothetical ABC transporter ATP-binding protein (74.5% evalue=0); ABC transporter ATPase complement(1443429..1445171) Yersinia pseudotuberculosis IP 32953 2953507 YP_069747.1 CDS YPTB1212 NC_006155.1 1445185 1446171 R similar to Salmonella typhi STY0853 HlyD-family secretion protein (66.5% evalue=1.E-122); Escherichia coli ECs0873 membrane protein (66.7% evalue=1.E-121); hypothetical protein complement(1445185..1446171) Yersinia pseudotuberculosis IP 32953 2953508 YP_069748.1 CDS YPTB1213 NC_006155.1 1446223 1446933 R similar to Escherichia coli b0796 ybiH; hypothetical transcriptional regulator in moaE-rhlE intergenic region (52.5% evalue=1.E-56); Escherichia coli Z1016 ybiH; transcriptional regulator (52.5% evalue=1.E-56); DNA-binding transcriptional regulator complement(1446223..1446933) Yersinia pseudotuberculosis IP 32953 2953509 YP_069749.1 CDS rhlE NC_006155.1 1447324 1448679 D this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 1447324..1448679 Yersinia pseudotuberculosis IP 32953 2956446 YP_069750.1 CDS YPTB1215 NC_006155.1 1449052 1449981 D similar to Yersinia pestis YPO1174 hypothetical protein (92.1% evalue=1.E-122); hypothetical protein 1449052..1449981 Yersinia pseudotuberculosis IP 32953 2953510 YP_069751.1 CDS YPTB1216 NC_006155.1 1450275 1451219 D similar to Yersinia pestis YPO1175 conserved hypothetical protein (100% evalue=1.E-179); Escherichia coli ECs3026 regulator protein (83.6% evalue=1.E-153); tRNA-dihydrouridine synthase C 1450275..1451219 Yersinia pseudotuberculosis IP 32953 2953511 YP_069752.1 CDS pbpG NC_006155.1 1451812 1452747 D specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 1451812..1452747 Yersinia pseudotuberculosis IP 32953 2956215 YP_069753.1 CDS dld NC_006155.1 1452868 1454583 R component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase complement(1452868..1454583) Yersinia pseudotuberculosis IP 32953 2955463 YP_069754.1 CDS cyaB NC_006155.1 1454790 1455329 D similar to Yersinia pestis YPO1178 cyaB; adenylate cyclase 2 (100% evalue=2.E-99); Methanocaldococcus jannaschii MJ0240 hypothetical protein MJ0240 (27.4% evalue=6.E-09); adenylate cyclase 1454790..1455329 Yersinia pseudotuberculosis IP 32953 2955384 YP_069755.1 CDS YPTB1220 NC_006155.1 1455355 1455696 R similar to Yersinia pestis YPO1179 conserved hypothetical protein (100% evalue=7.E-66); Salmonella typhi STY0449 yajD; conserved hypothetical protein (84% evalue=1.E-56); hypothetical protein complement(1455355..1455696) Yersinia pseudotuberculosis IP 32953 2953512 YP_069756.1 CDS YPTB1221 NC_006155.1 1456009 1457112 D similar to Yersinia pestis YPO1180 hypothetical protein (99.7% evalue=0); hypothetical protein 1456009..1457112 Yersinia pseudotuberculosis IP 32953 2953513 YP_069757.1 CDS YPTB1222 NC_006155.1 1457297 1457545 D similar to Yersinia pestis YPO1181 membrane protein (100% evalue=6.E-41); Escherichia coli JW1784 hypothetical protein (82.9% evalue=2.E-35); hypothetical protein 1457297..1457545 Yersinia pseudotuberculosis IP 32953 2953514 YP_069758.1 CDS phnC NC_006155.1 1457753 1458589 D similar to Yersinia pestis YPO1182 ABC transport ATP-binding subunit (100% evalue=1.E-156); Agrobacterium tumefaciens Atu0174 phnC; ABC transporter, nucleotide binding/ATPase [phosphonate] (47.8% evalue=1.E-57); ABC transport ATP-binding subunit, phnC 1457753..1458589 Yersinia pseudotuberculosis IP 32953 2956251 YP_069759.1 CDS phnD NC_006155.1 1458626 1459555 D similar to Yersinia pestis YPO1183 substrate-binding periplasmic transport protein (99.3% evalue=1.E-176); Sinorhizobium meliloti SMb21176 phoD; phosphate uptake ABC transporter periplasmic solute-binding protein precursor (39.2% evalue=2.E-51); periplasmic phosphonate binding protein phnD 1458626..1459555 Yersinia pseudotuberculosis IP 32953 2956252 YP_069760.1 CDS phnE1 NC_006155.1 1459719 1460519 D similar to Yersinia pestis YPO1184 ABC transport membrane permease (99.6% evalue=1.E-147); Agrobacterium tumefaciens AGR_C_285 phoE; phosphate uptake ABC transporter permease (34.4% evalue=3.E-38); ABC transport permease subunit, phnE 1459719..1460519 Yersinia pseudotuberculosis IP 32953 2956253 YP_069761.1 CDS phnE2 NC_006155.1 1460516 1461403 D similar to Yersinia pestis YPO1185 ABC transport membrane permease (100% evalue=1.E-166); Agrobacterium tumefaciens AGR_C_284 PhoT (43% evalue=1.E-41); ABC transport permease subunit, phnE 1460516..1461403 Yersinia pseudotuberculosis IP 32953 2956254 YP_069762.1 CDS YPTB1227 NC_006155.1 1461648 1462121 D similar to Yersinia pestis YPO1186 conserved hypothetical protein (99.3% evalue=3.E-85); Pseudomonas aeruginosa PA0915 conserved hypothetical protein (55.5% evalue=5.E-44); hypothetical protein 1461648..1462121 Yersinia pseudotuberculosis IP 32953 2953515 YP_069763.1 CDS YPTB1228 NC_006155.1 1462570 1463838 D similar to Yersinia pestis YPO1187 substrate-binding periplasmic transport protein (100% evalue=0); Pseudomonas aeruginosa PA4858 conserved hypothetical protein (80.2% evalue=0); branched-chain amino acid ABC transporter substrate-binding protein 1462570..1463838 Yersinia pseudotuberculosis IP 32953 2953516 YP_069764.1 CDS YPTB1229 NC_006155.1 1463962 1465563 D similar to Yersinia pestis YPO1188 Branched-chain amino acid transport system, permease component (100% evalue=0); Pseudomonas aeruginosa PA4859 probable permease of ABC transporter (84.8% evalue=1.E-151); branched-chain amino acid ABC transporter permease 1463962..1465563 Yersinia pseudotuberculosis IP 32953 2953517 YP_069765.1 CDS YPTB1230 NC_006155.1 1465563 1466639 D similar to Yersinia pestis YPO1189 Branched-chain amino acid transport system, permease component (100% evalue=0); Pseudomonas aeruginosa PA4860 probable permease of ABC transporter (77.5% evalue=1.E-166); branched-chain amino acid ABC transporter permease 1465563..1466639 Yersinia pseudotuberculosis IP 32953 2953518 YP_069766.1 CDS YPTB1231 NC_006155.1 1466636 1467472 D similar to Yersinia pestis YPO1190 ABC transport ATP-binding subunit (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA4861 probable ATP-binding component of ABC transporter (76.4% evalue=1.E-100); branched-chain amino acid ABC transporter ATP-binding protein 1466636..1467472 Yersinia pseudotuberculosis IP 32953 2953519 YP_069767.1 CDS YPTB1232 NC_006155.1 1467566 1468264 D similar to Yersinia pestis YPO1191 ABC transport ATP-binding subunit (99.1% evalue=1.E-129); Pseudomonas aeruginosa PA4862 probable ATP-binding component of ABC transporter (77.1% evalue=1.E-100); branched-chain amino acid ABC transporter ATP-binding protein 1467566..1468264 Yersinia pseudotuberculosis IP 32953 2953520 YP_069768.1 CDS YPTB1233 NC_006155.1 1468379 1469236 D similar to Yersinia pestis YPO1192 conserved hypothetical protein (98.2% evalue=1.E-164); B. halodurans BH2933 unknown (24.7% evalue=1.E-10); hypothetical protein 1468379..1469236 Yersinia pseudotuberculosis IP 32953 2953521 YP_069769.1 CDS YPTB1234 NC_006155.1 1469260 1470675 D similar to Yersinia pestis YPO1193 pyridoxal-dependent decarboxylase (99.7% evalue=0); A. thalianan At2g20340 F11A3.11; tyrosine decarboxylase (38.3% evalue=2.E-92); pyridoxal-dependent decarboxylase 1469260..1470675 Yersinia pseudotuberculosis IP 32953 2953522 YP_069770.1 CDS YPTB1235 NC_006155.1 1470886 1471740 R similar to Yersinia pestis YPO1194 sulfurtransferase (99.6% evalue=1.E-163); Escherichia coli JW2505 sseA; thiosulfate sulfurtransferase (rhodanese-like protein). (50.5% evalue=1.E-79); sulfurtransferase complement(1470886..1471740) Yersinia pseudotuberculosis IP 32953 2953523 YP_069771.1 CDS YPTB1236 NC_006155.1 1472476 1473408 D similar to Salmonella typhi STY2395 yehZ; periplasmic protein (71.1% evalue=1.E-120); Salmonella typhimurium STM2165 yehZ; ABC superfamily transport protein (possibly glycine betaine choline transport for osmoprotection) (71.1% evalue=1.E-120); choline/glycine/betaine ABC transporter substrate-binding protein 1472476..1473408 Yersinia pseudotuberculosis IP 32953 2953524 YP_069772.1 CDS YPTB1237 NC_006155.1 1473669 1474823 D similar to Yersinia pestis YPO1197 ABC transport integral membrane subunit (100% evalue=0); Escherichia coli Z3379 yehY; transport system permease (52.3% evalue=1.E-105); choline/glycine/betaine ABC transporter permease 1473669..1474823 Yersinia pseudotuberculosis IP 32953 2953525 YP_069773.1 CDS YPTB1238 NC_006155.1 1474820 1475758 D similar to Yersinia pestis YPO1198 ABC transport ATP-binding subunit (99.6% evalue=1.E-175); Salmonella typhimurium STM2163 yehX; ABC-type proline/glycine betaine transport system, ATPase component (68% evalue=1.E-112); choline/glycine/betaine ABC transporter ATP-binding protein 1474820..1475758 Yersinia pseudotuberculosis IP 32953 2953526 YP_069774.1 CDS YPTB1239 NC_006155.1 1475755 1476591 D similar to Yersinia pestis YPO1199 ABC transport integral membrane subunit (100% evalue=1.E-153); Salmonella typhi STY2392 yehW; permease transmembrane component (67% evalue=6.E-83); choline/glycine/betaine ABC transporter permease 1475755..1476591 Yersinia pseudotuberculosis IP 32953 2953527 YP_069775.1 CDS YPTB1240 NC_006155.1 1477045 1478379 D similar to Yersinia pestis YPO1200 amino acid permease (99.7% evalue=0); Salmonella typhi STY4493 amino acid permease (88.1% evalue=0); arginine:agmatin antiporter 1477045..1478379 Yersinia pseudotuberculosis IP 32953 2953528 YP_069776.1 CDS YPTB1241 NC_006155.1 1478449 1480755 D similar to Yersinia pestis YPO1201 arginine decarboxylase (99.8% evalue=0); Escherichia coli Z5719 adiA; biodegradative arginine decarboxylase (52.4% evalue=0); arginine decarboxylase 1478449..1480755 Yersinia pseudotuberculosis IP 32953 2953529 YP_069777.1 CDS YPTB1242 NC_006155.1 1480873 1481091 R hypothetical protein complement(1480873..1481091) Yersinia pseudotuberculosis IP 32953 2953530 YP_069778.1 CDS YPTB1243 NC_006155.1 1481216 1482106 R similar to Yersinia pestis YPO1203 membrane protein (99.3% evalue=1.E-162); Salmonella typhi STY2198 yedA; membrane protein (68.9% evalue=1.E-110); hypothetical protein complement(1481216..1482106) Yersinia pseudotuberculosis IP 32953 2953531 YP_069779.1 CDS YPTB1244 NC_006155.1 1482518 1483633 R similar to Yersinia pestis YPO1205 ompC2; outer membrane protein C2 (99.4% evalue=0); Escherichia coli b1377 outer membrane protein (62.4% evalue=1.E-135); porin complement(1482518..1483633) Yersinia pseudotuberculosis IP 32953 2953532 YP_069780.1 CDS dinG NC_006155.1 1483903 1486083 D helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1483903..1486083 Yersinia pseudotuberculosis IP 32953 2955458 YP_069781.1 CDS katA NC_006155.1 1486151 1487593 R similar to Yersinia pestis YPO1207 katA; catalase (100% evalue=0); Pseudomonas aeruginosa PA4236 katA; catalase (80.3% evalue=0); catalase complement(1486151..1487593) Yersinia pseudotuberculosis IP 32953 2955907 YP_069782.1 CDS YPTB1247 NC_006155.1 1487951 1488493 D similar to Yersinia pestis YPO1208 exported protein (99.4% evalue=2.E-98); Escherichia coli Z3508 hypothetical protein (51.1% evalue=9.E-55); hypothetical protein 1487951..1488493 Yersinia pseudotuberculosis IP 32953 2953533 YP_069783.1 CDS tyrP NC_006155.1 1488729 1489937 R similar to Yersinia pestis YPO1209 tyrP; tyrosine-specific transport protein (99.7% evalue=0); Escherichia coli JW1895 tyrP; Tyrosine-specific transport protein (tyrosine permease) (79.1% evalue=0); HAAAP family tyrosine/H(+) symporter TyrP complement(1488729..1489937) Yersinia pseudotuberculosis IP 32953 2956847 YP_069784.1 CDS YPTB1249 NC_006155.1 1490211 1490462 R hypothetical protein complement(1490211..1490462) Yersinia pseudotuberculosis IP 32953 2953534 YP_069785.1 CDS YPTB1250 NC_006155.1 1490556 1491749 D similar to Yersinia pestis YPO1210 conserved hypothetical protein (99.7% evalue=0); Salmonella typhi STY2523 conserved hypothetical protein (59.9% evalue=1.E-137); competence damage-inducible protein A 1490556..1491749 Yersinia pseudotuberculosis IP 32953 2953535 YP_069786.1 CDS eco NC_006155.1 1491807 1492316 R serine protease inhibitor, inhibits trypsin and other proteases; ecotin complement(1491807..1492316) Yersinia pseudotuberculosis IP 32953 2955493 YP_069787.1 CDS YPTB1252 NC_006155.1 1492351 1492608 R plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin complement(1492351..1492608) Yersinia pseudotuberculosis IP 32953 2953536 YP_069788.1 CDS nrdB NC_006155.1 1492612 1493742 R B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta complement(1492612..1493742) Yersinia pseudotuberculosis IP 32953 2956155 YP_069789.1 CDS nrdA NC_006155.1 1493904 1496192 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1493904..1496192) Yersinia pseudotuberculosis IP 32953 2956154 YP_069790.1 CDS ubiG NC_006155.1 1496686 1497414 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(1496686..1497414) Yersinia pseudotuberculosis IP 32953 2956854 YP_069791.1 CDS gyrA NC_006155.1 1497714 1500407 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1497714..1500407 Yersinia pseudotuberculosis IP 32953 2955766 YP_069792.1 CDS rcsC NC_006155.1 1500595 1503468 D similar to Yersinia pestis YPO1217 rcsC; two component sensor kinase/response regulator protein RcsC (99.8% evalue=0); Salmonella typhi STY2496 rcsC; sensor protein RcsC (58% evalue=0); hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1500595..1503468 Yersinia pseudotuberculosis IP 32953 2956407 YP_069793.1 CDS rcsB NC_006155.1 1503536 1504189 R two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB complement(1503536..1504189) Yersinia pseudotuberculosis IP 32953 2956406 YP_069794.1 CDS YPTB1259 NC_006155.1 1504192 1506885 R similar to Salmonella typhi STY2494 yojN; two-component system sensor kinase (46.4% evalue=0); Salmonella typhimurium STM2269 yojN; sensor/kinase in regulatory system (46.5% evalue=0); phosphotransfer intermediate protein in two-component regulatory system with RcsBC complement(1504192..1506885) Yersinia pseudotuberculosis IP 32953 2953537 YP_069795.1 CDS YPTB1260 NC_006155.1 1506909 1508063 R similar to Yersinia pestis YPO1221 membrane protein (100% evalue=0); Agrobacterium tumefaciens AGR_C_4938 probable transport protein (36.8% evalue=6.E-59); MFS transporter complement(1506909..1508063) Yersinia pseudotuberculosis IP 32953 2953538 YP_069796.1 CDS YPTB1261 NC_006155.1 1509158 1510282 D allows for ions and hydrophilic solutes to cross the outer membrane; porin 1509158..1510282 Yersinia pseudotuberculosis IP 32953 2953539 YP_069797.1 CDS ampH NC_006155.1 1511022 1512188 R this protein has no known enzymatic function; beta-lactam binding protein AmpH complement(1511022..1512188) Yersinia pseudotuberculosis IP 32953 2955192 YP_069798.1 CDS YPTB1263 NC_006155.1 1512463 1513989 R similar to Yersinia pestis YPO1226 transport protein (99.5% evalue=0); Clostridium acetobutylicum CAC0357 permease of the Na:galactoside symporter family (37.6% evalue=4.E-96); GPH family oligogalacturonide symporter complement(1512463..1513989) Yersinia pseudotuberculosis IP 32953 2953540 YP_069799.1 CDS YPTB1264 NC_006155.1 1514366 1515394 D similar to Yersinia pestis YPO1228 conserved hypothetical protein (99.7% evalue=0); Ralstonia solanacearum RS02069 conserved hypothetical protein (41.1% evalue=1.E-67); hypothetical protein 1514366..1515394 Yersinia pseudotuberculosis IP 32953 2953541 YP_069800.1 CDS tsr2 NC_006155.1 1515468 1517255 R similar to Yersinia pestis YPO1229 tsr2, cheD2; methyl-accepting chemotaxis protein (100% evalue=0); Ralstonia solanacearum RS04837 methyl-accepting chemotaxis transmembrane protein (55.3% evalue=1.E-180); methyl-accepting chemotaxis protein complement(1515468..1517255) Yersinia pseudotuberculosis IP 32953 2956840 YP_069801.1 CDS pla2 NC_006155.1 1517662 1518597 R outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA; outer membrane protease complement(1517662..1518597) Yersinia pseudotuberculosis IP 32953 2956275 YP_069802.1 CDS msgA NC_006155.1 1518769 1519011 R similar to Yersinia pestis YPO1232 msgA, dinI; stress response protein (100% evalue=9.E-40); Salmonella typhi STY1883 msgA; virulence protein (61.8% evalue=1.E-20); stress response protein complement(1518769..1519011) Yersinia pseudotuberculosis IP 32953 2956086 YP_069803.1 CDS YPTB1268 NC_006155.1 1519217 1519939 R similar to Yersinia pestis YPO1233 prophage repressor protein (100% evalue=1.E-135); Escherichia coli ECs0274 repressor protein CI (47.6% evalue=1.E-56); cI prophage repressor protein complement(1519217..1519939) Yersinia pseudotuberculosis IP 32953 2953542 YP_069804.1 CDS YPTB1269 NC_006155.1 1520213 1520692 D similar to Yersinia pestis YPO1234 probable phage antitermination protein Q (100% evalue=6.E-88); Salmonella typhimurium STM2239 phage protein; homology to antiterminator protein Q of phage P5 (60.8% evalue=3.E-37); phage antitermination protein Q 1520213..1520692 Yersinia pseudotuberculosis IP 32953 2953543 YP_069805.1 CDS YPTB1270 NC_006155.1 1520894 1522207 D similar to Yersinia pestis YPO1235 conserved hypothetical protein (99.3% evalue=0); Brucella melitensis BMEII1091 hypothetical pyridoxal phosphate biosynthesis protein (46.1% evalue=1.E-103); hypothetical protein 1520894..1522207 Yersinia pseudotuberculosis IP 32953 2953544 YP_069806.1 CDS YPTB1272 NC_006155.1 1522935 1523750 D similar to Yersinia pestis YPO1237 transcriptional regulatory protein (100% evalue=1.E-150); Pasteurella multocida PM1367 glycerol-3 phosphate regulon, (47.6% evalue=2.E-57); transcriptional regulator 1522935..1523750 Yersinia pseudotuberculosis IP 32953 2953546 YP_069807.1 CDS YPTB1273 NC_006155.1 1523726 1524520 D similar to Yersinia pestis YPO1238 conserved hypothetical protein (99.6% evalue=1.E-148); Salmonella typhimurium STM2915 ygbM; endonuclease (46.2% evalue=7.E-60); hypothetical protein 1523726..1524520 Yersinia pseudotuberculosis IP 32953 2953547 YP_069808.1 CDS YPTB1274 NC_006155.1 1525116 1525406 D similar to Yersinia pestis YPO1239 bacteriophage protein (98.9% evalue=3.E-48); bacteriophage protein 1525116..1525406 Yersinia pseudotuberculosis IP 32953 2953548 YP_069809.1 CDS YPTB1275 NC_006155.1 1525422 1526069 D similar to Yersinia pestis YPO1240 ATP-binding protein (100% evalue=1.E-110); bacteriophage ATP-binding protein 1525422..1526069 Yersinia pseudotuberculosis IP 32953 2953549 YP_069810.1 CDS YPTB1276 NC_006155.1 1526074 1526268 D similar to Yersinia pestis YPO1241 bacteriophage protein (100% evalue=6.E-31); Escherichia coli ECs4978 hypothetical protein (44.6% evalue=4.E-07); bacteriophage protein 1526074..1526268 Yersinia pseudotuberculosis IP 32953 2953550 YP_069811.1 CDS YPTB1277 NC_006155.1 1526265 1527773 D similar to Yersinia pestis YPO1242 bacteriophage tail sheath protein (100% evalue=0); H. influenzae HI1511 hypothetical protein HI1511 (40% evalue=1.E-93); bacteriophage tail sheath protein 1526265..1527773 Yersinia pseudotuberculosis IP 32953 2953551 YP_069812.1 CDS YPTB1278 NC_006155.1 1527795 1528163 D similar to Yersinia pestis YPO1243 hypothetical protein, 99% identical; hypothetical protein 1527795..1528163 Yersinia pseudotuberculosis IP 32953 2953552 YP_069813.1 CDS YPTB1279 NC_006155.1 1528165 1528464 D similar to Yersinia pestis YPO1244 hypothetical protein (100% evalue=3.E-50); bacteriophage protein 1528165..1528464 Yersinia pseudotuberculosis IP 32953 2953553 YP_069814.1 CDS YPTB1280 NC_006155.1 1528585 1530078 D similar to Yersinia pestis YPO1245 bacteriophage coat protein (100% evalue=0); bacteriophage coat protein 1528585..1530078 Yersinia pseudotuberculosis IP 32953 2953554 YP_069815.1 CDS YPTB1281 NC_006155.1 1530345 1531751 D similar to Yersinia pestis YPO1246 bacteriophage protein (99.1% evalue=0); H. influenzae HI1515 muN; N protein (25.2% evalue=2.E-15); bacteriophage protein 1530345..1531751 Yersinia pseudotuberculosis IP 32953 2953555 YP_069816.1 CDS YPTB1282 NC_006155.1 1531748 1532803 D similar to Yersinia pestis YPO1247 bacteriophage tail protein (99.7% evalue=0); Escherichia coli ECs4984 tail protein (29.2% evalue=3.E-31); bacteriophage tail protein 1531748..1532803 Yersinia pseudotuberculosis IP 32953 2953556 YP_069817.1 CDS YPTB1283 NC_006155.1 1532819 1533415 D similar to Yersinia pestis YPO1248 bacteriophage (baseplate assembly) protein (100% evalue=1.E-108); Neisseria meningitidis NMB1111 baseplate assembly protein V, (36.9% evalue=1.E-12); bacteriophage (baseplate assembly) protein 1532819..1533415 Yersinia pseudotuberculosis IP 32953 2953557 YP_069818.1 CDS YPTB1284 NC_006155.1 1533412 1533867 D similar to Yersinia pestis YPO1249 bacteriophage protein GP46 (100% evalue=9.E-83); Escherichia coli ECs4986 hypothetical protein (42.1% evalue=6.E-20); bacteriophage protein GP46 1533412..1533867 Yersinia pseudotuberculosis IP 32953 2953558 YP_069819.1 CDS YPTB1285 NC_006155.1 1533871 1535007 D similar to Yersinia pestis YPO1250 bacteriophage protein (99.7% evalue=0); H. influenzae HI1520 hypothetical protein HI1520 (29.4% evalue=1.E-30); bacteriophage protein 1533871..1535007 Yersinia pseudotuberculosis IP 32953 2953559 YP_069820.1 CDS YPTB1286 NC_006155.1 1535004 1535606 D similar to Yersinia pestis YPO1251 bacteriophage protein (100% evalue=4.E-63); bacteriophage protein GP48 1535004..1535606 Yersinia pseudotuberculosis IP 32953 2953560 YP_069821.1 CDS YPTB1287 NC_006155.1 1535703 1536419 D similar to Yersinia pestis YPO1252 stf; bacteriophage tail fiber protein (95.2% evalue=4.E-52); Escherichia coli JW2351 yfdL; Hypothetical protein (34.9% evalue=2.E-13); bacteriophage tail fiber protein 1535703..1536419 Yersinia pseudotuberculosis IP 32953 2953561 YP_069822.1 CDS YPTB1288 NC_006155.1 1536421 1536840 D similar to Salmonella typhi STY4610 phage tail fibre protein (35.5% evalue=2.E-08); Salmonella typhi STY3693 conserved hypothetical protein (30.7% evalue=4.E-11); tail fiber assembly protein p37 1536421..1536840 Yersinia pseudotuberculosis IP 32953 2953562 YP_069823.1 CDS YPTB1289 NC_006155.1 1537280 1538020 D similar to Yersinia pestis YPO1253 LacI-family regulatory protein (100% evalue=1.E-137); B. halodurans BH0181 unknown conserved protein (46.2% evalue=2.E-58); LacI family regulatory protein 1537280..1538020 Yersinia pseudotuberculosis IP 32953 2953563 YP_069824.1 CDS bglA NC_006155.1 1538311 1539747 D similar to Yersinia pestis YPO1254 bglA; 6-phospho-beta-glucosidase (100% evalue=0); Salmonella typhimurium STM3051 bglA; 6-phospho-beta-glucosidase A (79% evalue=0); 6-phospho-beta-glucosidase 1538311..1539747 Yersinia pseudotuberculosis IP 32953 2955283 YP_069825.1 CDS YPTB1291 NC_006155.1 1539873 1540235 R similar to Yersinia pestis YPO1255 hypothetical protein (100% evalue=1.E-64); hypothetical protein complement(1539873..1540235) Yersinia pseudotuberculosis IP 32953 2953564 YP_069826.1 CDS YPTB1292 NC_006155.1 1540821 1541105 R hypothetical protein complement(1540821..1541105) Yersinia pseudotuberculosis IP 32953 2953565 YP_069827.1 CDS YPTB1293 NC_006155.1 1541134 1541391 R similar to Yersinia pestis YPO0872 hypothetical protein (87.5% evalue=1.E-33); hypothetical protein complement(1541134..1541391) Yersinia pseudotuberculosis IP 32953 2953566 YP_069828.1 CDS YPTB1296 NC_006155.1 1543440 1545236 R similar to Yersinia pestis YPO1260 membrane protein (100% evalue=0); Salmonella typhi STY2466 yejM; sulphatase (63.5% evalue=0); hypothetical protein complement(1543440..1545236) Yersinia pseudotuberculosis IP 32953 2953569 YP_069829.1 CDS YPTB1297 NC_006155.1 1545264 1545491 R similar to Yersinia pestis YPO1261 conserved hypothetical protein (100% evalue=4.E-35); Salmonella typhimurium STM2227 yejL; cytoplasmic protein (81.3% evalue=6.E-29); hypothetical protein complement(1545264..1545491) Yersinia pseudotuberculosis IP 32953 2953570 YP_069830.1 CDS YPTB1298 NC_006155.1 1545669 1546673 D similar to Yersinia pestis YPO1262 nucleoid-associated protein (99.7% evalue=0); Salmonella typhi STY2463 yejK; nucleoid-asociated protein (78.4% evalue=1.E-147); nucleoid-associated protein NdpA 1545669..1546673 Yersinia pseudotuberculosis IP 32953 2953571 YP_069831.1 CDS rplY NC_006155.1 1546761 1547045 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(1546761..1547045) Yersinia pseudotuberculosis IP 32953 2956509 YP_069832.1 CDS YPTB1300 NC_006155.1 1547207 1548964 R similar to Yersinia pestis YPO1265 DEAD box helicase family protein (99.6% evalue=0); Salmonella typhi STY2460 yejH; helicase (77.9% evalue=0); DEAD/DEAH box helicase complement(1547207..1548964) Yersinia pseudotuberculosis IP 32953 2953572 YP_069833.1 CDS rsuA NC_006155.1 1549498 1550205 D catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 1549498..1550205 Yersinia pseudotuberculosis IP 32953 2956560 YP_069834.1 CDS bcr NC_006155.1 1550384 1551583 D Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 1550384..1551583 Yersinia pseudotuberculosis IP 32953 2955275 YP_069835.1 CDS YPTB1303 NC_006155.1 1552586 1552930 D similar to Yersinia pestis YPO1269 conserved hypothetical protein (98.2% evalue=4.E-61); Escherichia coli JW2169 yejG; Hypothetical protein (55.2% evalue=2.E-29); hypothetical protein 1552586..1552930 Yersinia pseudotuberculosis IP 32953 2953573 YP_069836.1 CDS yejF NC_006155.1 1552991 1554583 R similar to Yersinia pestis YPO1270 ABC transporter ATP-binding subunit (99.6% evalue=0); Salmonella typhimurium STM2219 yejF; ATPase component of ABC-type transport system, contain duplicated ATPase domain (71.4% evalue=0); oligo-dipeptide/nickel ABC transporter ATP-binding subunit complement(1552991..1554583) Yersinia pseudotuberculosis IP 32953 2957015 YP_069837.1 CDS yejE NC_006155.1 1554585 1555613 R similar to Yersinia pestis YPO1271 ABC transporter integral membrane subunit (100% evalue=0); Escherichia coli ECs3071 transport system permease (78.4% evalue=1.E-158); oligo-dipeptide/nickel ABC transporter permease complement(1554585..1555613) Yersinia pseudotuberculosis IP 32953 2957014 YP_069838.1 CDS yejB NC_006155.1 1555613 1556713 R similar to Yersinia pestis YPO1272 ABC transporter integral membrane subunit (99.7% evalue=0); Escherichia coli ECs3070 transport system permease (80.8% evalue=1.E-171); oligo-dipeptide/nickel ABC transporter permease complement(1555613..1556713) Yersinia pseudotuberculosis IP 32953 2957013 YP_069839.1 CDS yejA NC_006155.1 1556723 1558531 R similar to Yersinia pestis YPO1273 substrate-binding transport protein (99.8% evalue=0); Escherichia coli JW2165 yejA; Hypothetical protein (68.1% evalue=0); oligo-dipeptide/nickel ABC transporter substrate-binding protein complement(1556723..1558531) Yersinia pseudotuberculosis IP 32953 2957012 YP_069840.1 CDS YPTB1308 NC_006155.1 1558613 1560193 R similar to Yersinia pestis YPO1274 membrane protein (100% evalue=0); Salmonella typhi STY2451 rtn; rtn protein (42.8% evalue=1.E-119); hypothetical protein complement(1558613..1560193) Yersinia pseudotuberculosis IP 32953 2953574 YP_069841.1 CDS spr NC_006155.1 1560779 1561363 R by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein complement(1560779..1561363) Yersinia pseudotuberculosis IP 32953 2956631 YP_069842.1 CDS YPTB1310 NC_006155.1 1561805 1562506 R similar to Yersinia pestis YPO1276 membrane protein (99.1% evalue=1.E-131); Escherichia coli Z3433 hypothetical protein (62.1% evalue=5.E-82); hypothetical protein complement(1561805..1562506) Yersinia pseudotuberculosis IP 32953 2953575 YP_069843.1 CDS YPTB1311 NC_006155.1 1562565 1563548 R similar to Yersinia pestis YPO1277 cobalamin synthesis protein (99% evalue=0); Escherichia coli b2173 yeiR; hypothetical 36.1 kD protein in fruB-rtn intergenic region (67.5% evalue=1.E-124); cobalamin synthesis protein complement(1562565..1563548) Yersinia pseudotuberculosis IP 32953 2953576 YP_069844.1 CDS YPTB1312 NC_006155.1 1563863 1564189 D similar to Yersinia pestis YPO1278 membrane protein, 100% identical; hypothetical protein 1563863..1564189 Yersinia pseudotuberculosis IP 32953 2953577 YP_069845.1 CDS YPTB1313 NC_006155.1 1564298 1565098 D similar to Yersinia pestis YPO1279 transcriptional regulatory protein (100% evalue=1.E-140); H. influenzae HI0054 uxuR; uxu operon regulator (52.6% evalue=3.E-66); transcriptional regulator 1564298..1565098 Yersinia pseudotuberculosis IP 32953 2953578 YP_069846.1 CDS YPTB1314 NC_006155.1 1565242 1566714 R similar to Yersinia pestis YPO1280 D-mannonate oxidoreductase (99.7% evalue=0); Escherichia coli ECs3064 oxidoreductase (64.8% evalue=0); D-mannonate oxidoreductase complement(1565242..1566714) Yersinia pseudotuberculosis IP 32953 2953579 YP_069847.1 CDS uxuA NC_006155.1 1567306 1568499 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1567306..1568499 Yersinia pseudotuberculosis IP 32953 2956889 YP_069848.1 CDS YPTB1316 NC_006155.1 1568639 1569211 R Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P complement(1568639..1569211) Yersinia pseudotuberculosis IP 32953 2953580 YP_069849.1 CDS mtr NC_006155.1 1569315 1570559 R similar to Yersinia pestis YPO1285 mtr; tryptophan-specific transport protein (100% evalue=0); Pseudomonas aeruginosa PA5434 mtr; tryptophan permease (59.6% evalue=1.E-139); HAAAP family tryptophan-specific transporter mtr complement(1569315..1570559) Yersinia pseudotuberculosis IP 32953 2956094 YP_069850.1 CDS YPTB1318 NC_006155.1 1570971 1571225 D similar to Yersinia pestis YPO1286 conserved hypothetical protein (98.8% evalue=1.E-45); Escherichia coli JW2158 hypothetical protein (66.6% evalue=1.E-28); hypothetical protein 1570971..1571225 Yersinia pseudotuberculosis IP 32953 2953581 YP_069851.1 CDS YPTB1319 NC_006155.1 1571294 1572109 R similar to Yersinia pestis YPO1287 short chain oxidoreductase (99.2% evalue=1.E-150); Sinorhizobium meliloti SMc02034 oxidoreductase (61% evalue=6.E-80); short chain oxidoreductase complement(1571294..1572109) Yersinia pseudotuberculosis IP 32953 2953582 YP_069852.1 CDS YPTB1320 NC_006155.1 1572120 1573085 R similar to Yersinia pestis YPO1288 D-isomer specific 2-hydroxyacid dehydrogenase family protein (99.6% evalue=1.E-177); Mycobacterium tuberculosis Rv2996c serA; D-3-phosphoglycerate dehydrogenase (39.1% evalue=4.E-47); D-isomer specific 2-hydroxyacid dehydrogenase family protein complement(1572120..1573085) Yersinia pseudotuberculosis IP 32953 2953583 YP_069853.1 CDS YPTB1321 NC_006155.1 1573082 1574224 R similar to Yersinia pestis YPO1289 conserved hypothetical protein (98.6% evalue=0); Agrobacterium tumefaciens AGR_C_4970 transcription induced by xylose (54.3% evalue=1.E-105); hypothetical protein complement(1573082..1574224) Yersinia pseudotuberculosis IP 32953 2953584 YP_069854.1 CDS YPTB1322 NC_006155.1 1574576 1576072 D similar to Yersinia pestis YPO1290 aldehyde dehydrogenase (99.1% evalue=0); Salmonella typhimurium STM2791 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent (44.4% evalue=1.E-111); aldehyde dehydrogenase 1574576..1576072 Yersinia pseudotuberculosis IP 32953 2953585 YP_069855.1 CDS YPTB1323 NC_006155.1 1576076 1577629 D similar to Yersinia pestis YPO1291 carbohydrate kinase (99.4% evalue=0); Clostridium acetobutylicum CAC2612 xylB; xylulose kinase (38.9% evalue=1.E-103); carbohydrate kinase 1576076..1577629 Yersinia pseudotuberculosis IP 32953 2953586 YP_069856.1 CDS rpiA NC_006155.1 1577649 1578359 D similar to Yersinia pestis YPO1292 rpiA; ribose 5-phosphate isomerase (100% evalue=1.E-136); Mesorhizobium loti mll0526 ribose 5-phosphate isomerase (44.5% evalue=2.E-42); ribose 5-phosphate isomerase 1577649..1578359 Yersinia pseudotuberculosis IP 32953 2956484 YP_069857.1 CDS YPTB1325 NC_006155.1 1578475 1579563 D similar to Yersinia pestis YPO1293 periplasmic carbohydrate-binding transport protein (99.7% evalue=0); Salmonella typhi STY3894 rbsB; D-ribose-binding periplasmic protein (26.8% evalue=8.E-20); sugar ABC transporter substrate-binding protein 1578475..1579563 Yersinia pseudotuberculosis IP 32953 2953587 YP_069858.1 CDS YPTB1326 NC_006155.1 1579672 1581246 D similar to Yersinia pestis YPO1294 ABC transport ATP-binding subunit (99.2% evalue=0); Agrobacterium tumefaciens AGR_C_5112 ABC transporter protein, ATP binding component (38.8% evalue=9.E-82); sugar ABC transporter ATP-binding protein 1579672..1581246 Yersinia pseudotuberculosis IP 32953 2953588 YP_069859.1 CDS YPTB1327 NC_006155.1 1581282 1582280 D similar to Yersinia pestis YPO1295 ABC transport integral membrane subunit (99.6% evalue=0); Lactococcus lactis L83296 rbsC; ribose ABC transporter permease (37.8% evalue=2.E-52); sugar ABC transporter permease 1581282..1582280 Yersinia pseudotuberculosis IP 32953 2953589 YP_069860.1 CDS YPTB1328 NC_006155.1 1582373 1582828 R similar to Yersinia pestis YPO1296 Mut family protein (100% evalue=3.E-88); Pseudomonas aeruginosa PA2769 hypothetical protein (39.8% evalue=8.E-18); Mut family protein complement(1582373..1582828) Yersinia pseudotuberculosis IP 32953 2953590 YP_069861.1 CDS fruB NC_006155.1 1583090 1584223 D phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; PTS system fructose-specific transporter subunit IIA/HPr protein 1583090..1584223 Yersinia pseudotuberculosis IP 32953 2955644 YP_069862.1 CDS fruK NC_006155.1 1584220 1585158 D converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 1584220..1585158 Yersinia pseudotuberculosis IP 32953 2955645 YP_069863.1 CDS fruA NC_006155.1 1585173 1586873 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 1585173..1586873 Yersinia pseudotuberculosis IP 32953 2955643 YP_069864.1 CDS psaE NC_006155.1 1587198 1587842 D similar to Yersinia pestis YPO1301 psaE; regulatory protein (100% evalue=1.E-118); regulatory protein 1587198..1587842 Yersinia pseudotuberculosis IP 32953 2956336 YP_069865.1 CDS psaF NC_006155.1 1587839 1588327 D similar to Yersinia pestis YPO1302 psaF; membrane protein (100% evalue=2.E-90); hypothetical protein 1587839..1588327 Yersinia pseudotuberculosis IP 32953 2956337 YP_069866.1 CDS psaA NC_006155.1 1588872 1589348 D similar to Yersinia pestis YPO1303 psaA; pH 6 antigen precursor (antigen 4) (adhesin) (100% evalue=6.E-91); adhesin 1588872..1589348 Yersinia pseudotuberculosis IP 32953 2956333 YP_069867.1 CDS psaB NC_006155.1 1589475 1590296 D similar to Yersinia pestis YPO1304 psaB; chaperone protein PsaB precursor (100% evalue=1.E-158); Salmonella typhimurium STM0300 safB; fimbriae assembly chaparone (45.4% evalue=1.E-54); chaperone protein PsaB 1589475..1590296 Yersinia pseudotuberculosis IP 32953 2956334 YP_069868.1 CDS psaC NC_006155.1 1590380 1592851 D similar to Yersinia pestis YPO1305 psaC; outer membrane usher protein PsaC precursor (100% evalue=0); Salmonella typhi STY0336 safC; outer-membrane fimbrial usher protein (46.3% evalue=0); outer membrane usher protein PsaC 1590380..1592851 Yersinia pseudotuberculosis IP 32953 2956335 YP_069869.1 CDS nfo NC_006155.1 1592938 1593795 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(1592938..1593795) Yersinia pseudotuberculosis IP 32953 2956136 YP_069870.1 CDS YPTB1338 NC_006155.1 1593959 1595047 R similar to Yersinia pestis YPO1307 membrane protein (100% evalue=0); Escherichia coli JW2145 yeiH; Hypothetical protein (66.3% evalue=1.E-121); hypothetical protein complement(1593959..1595047) Yersinia pseudotuberculosis IP 32953 2953591 YP_069871.1 CDS YPTB1339 NC_006155.1 1595705 1596577 D similar to Yersinia pestis YPO1308 LysR-family transcriptional regulatory protein (100% evalue=1.E-162); Salmonella typhimurium STM2201 yeiE; transcriptional regulator, LysR family (73.8% evalue=1.E-119); DNA-binding transcriptional regulator 1595705..1596577 Yersinia pseudotuberculosis IP 32953 2953592 YP_069872.1 CDS lysP NC_006155.1 1596835 1598346 D similar to Yersinia pestis YPO1309 lysP, cadR; lysine-specific permease (100% evalue=0); Escherichia coli ECs3048 lysine-specific permease (87.6% evalue=0); lysine transporter 1596835..1598346 Yersinia pseudotuberculosis IP 32953 2955978 YP_069873.1 CDS YPTB1341 NC_006155.1 1598632 1599777 D similar to Yersinia pestis YPO1310 periplasmic substrate-binding transport protein (99.7% evalue=0); Agrobacterium tumefaciens Atu3391 ABC transporter, substrate binding protein [iron] (37.5% evalue=9.E-76); iron siderophore/cobalamin ABC transporter substrate-binding protein 1598632..1599777 Yersinia pseudotuberculosis IP 32953 2953593 YP_069874.1 CDS YPTB1342 NC_006155.1 1599976 1601058 D similar to Yersinia pestis YPO1311 FecCD-family membrane transport protein (100% evalue=0); Salmonella typhi STY0802 ABC transporter permease (FecCD_family) (72.8% evalue=1.E-141); iron ABC transporter permease 1599976..1601058 Yersinia pseudotuberculosis IP 32953 2953594 YP_069875.1 CDS YPTB1343 NC_006155.1 1601055 1601843 D similar to Yersinia pestis YPO1312 siderophore ABC transporter, ATP-binding subunit (99.6% evalue=1.E-144); Salmonella typhimurium STM0771 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component (72.4% evalue=1.E-103); siderophore/cobalamin ABC transporter ATP-binding subunit 1601055..1601843 Yersinia pseudotuberculosis IP 32953 2953595 YP_069876.1 CDS YPTB1344 NC_006155.1 1602103 1604100 D YiuR; outer membrane siderophore receptor; outer membrane receptor 1602103..1604100 Yersinia pseudotuberculosis IP 32953 2953596 YP_069877.1 CDS YPTB1345 NC_006155.1 1604371 1604991 R similar to Yersinia pestis YPO1314 glutathione S-transferase-family protein (99.5% evalue=1.E-119); Pseudomonas aeruginosa PA2813 probable glutathione S-transferase (51.4% evalue=6.E-65); glutathione S-transferase complement(1604371..1604991) Yersinia pseudotuberculosis IP 32953 2953597 YP_069878.1 CDS YPTB1346 NC_006155.1 1605196 1605858 R similar to Yersinia pestis YPO1315 hydrolase (100% evalue=1.E-125); Pseudomonas aeruginosa PA1143 hypothetical protein (42.2% evalue=4.E-39); hydrolase complement(1605196..1605858) Yersinia pseudotuberculosis IP 32953 2953598 YP_069879.1 CDS YPTB1347 NC_006155.1 1606345 1607412 D similar to Yersinia pestis YPO1316 iron/ascorbate oxidoreductase family protein (99.7% evalue=0); Mesorhizobium loti mlr6892 hypothetical protein (61.7% evalue=1.E-118); iron/ascorbate oxidoreductase family protein 1606345..1607412 Yersinia pseudotuberculosis IP 32953 2953599 YP_069880.1 CDS YPTB1348 NC_006155.1 1607640 1608464 D similar to Yersinia pestis YPO1317 exported protein (99.2% evalue=1.E-151); Pseudomonas aeruginosa PA3931 conserved hypothetical protein (50.5% evalue=6.E-59); ABC transporter substrate-binding protein 1607640..1608464 Yersinia pseudotuberculosis IP 32953 2953600 YP_069881.1 CDS YPTB1349 NC_006155.1 1608461 1609447 D similar to Yersinia pestis YPO1318 ABC transport ATP-binding subunit (100% evalue=1.E-180); Mesorhizobium loti mll4792 ABC transporter, ATP-binding protein (51.2% evalue=9.E-79); ABC transporter ATP-binding protein 1608461..1609447 Yersinia pseudotuberculosis IP 32953 2953601 YP_069882.1 CDS YPTB1350 NC_006155.1 1609444 1610115 D similar to Yersinia pestis YPO1319 ABC transport integral membrane subunit (100% evalue=1.E-119); Ralstonia solanacearum RS04492 probable transmembrane ABC transporter protein (54.6% evalue=4.E-64); ABC transport permease subunit 1609444..1610115 Yersinia pseudotuberculosis IP 32953 2953602 YP_069883.1 CDS dacC NC_006155.1 1610450 1611655 D similar to Yersinia pestis YPO1320 dacC; D-alanyl-D-alanine carboxypeptidase (100% evalue=0); Escherichia coli ECs0919 D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6 (71.4% evalue=1.E-164); D-alanyl-D-alanine carboxypeptidase 1610450..1611655 Yersinia pseudotuberculosis IP 32953 2955421 YP_069884.1 CDS sdaC NC_006155.1 1612130 1613431 R similar to Yersinia pestis YPO1321 sdaC, dcrA; serine transporter (99.7% evalue=0); Escherichia coli Z4113 sdaC; probable serine transporter (82.9% evalue=0); HAAAP family serine/H(+) symporter SdaC complement(1612130..1613431) Yersinia pseudotuberculosis IP 32953 2956576 YP_069885.1 CDS deoR NC_006155.1 1614532 1615296 R similar to Yersinia pestis YPO1322 deoR, nucR; deoxyribose operon repressor (100% evalue=1.E-144); Salmonella typhimurium STM0864 deoR; transcriptional repressor for deoxyribose operon (DeoR family) (57.9% evalue=1.E-80); DNA-binding transcriptional repressor DeoR complement(1614532..1615296) Yersinia pseudotuberculosis IP 32953 2955454 YP_069886.1 CDS deoC NC_006155.1 1615527 1616198 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(1615527..1616198) Yersinia pseudotuberculosis IP 32953 2955451 YP_069887.1 CDS YPTB1355 NC_006155.1 1616456 1617061 R similar to Yersinia pestis YPO1324 permease (100% evalue=1.E-115); Salmonella typhimurium STM0865 ybjG; permease (57.5% evalue=9.E-68); undecaprenyl pyrophosphate phosphatase complement(1616456..1617061) Yersinia pseudotuberculosis IP 32953 2953603 YP_069888.1 CDS YPTB1356 NC_006155.1 1617061 1617876 R similar to Yersinia pestis YPO1325 membrane protein (99.6% evalue=1.E-161); Pseudomonas aeruginosa PA4382 hypothetical protein (34.9% evalue=2.E-28); hypothetical protein complement(1617061..1617876) Yersinia pseudotuberculosis IP 32953 2953604 YP_069889.1 CDS YPTB1357 NC_006155.1 1618209 1619897 R similar to Yersinia pestis YPO1326 TrkA, Potassium channel-family protein (99.8% evalue=0); Salmonella typhimurium STM0870 transport protein (90.8% evalue=0); hypothetical protein complement(1618209..1619897) Yersinia pseudotuberculosis IP 32953 2953605 YP_069890.1 CDS grxA NC_006155.1 1620307 1620570 R functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin complement(1620307..1620570) Yersinia pseudotuberculosis IP 32953 2955748 YP_069891.1 CDS YPTB1359 NC_006155.1 1621033 1621347 D YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein 1621033..1621347 Yersinia pseudotuberculosis IP 32953 2953606 YP_069892.1 CDS YPTB1360 NC_006155.1 1621489 1621974 D similar to Yersinia pestis YPO1330 conserved hypothetical protein (100% evalue=4.E-87); Salmonella typhimurium STM0876 ybjN; cytoplasmic protein (68.9% evalue=9.E-58); hypothetical protein 1621489..1621974 Yersinia pseudotuberculosis IP 32953 2953607 YP_069893.1 CDS potF NC_006155.1 1622527 1623636 D similar to Yersinia pestis YPO1331 potF; putrescine-binding periplasmic protein precursor (100% evalue=0); Escherichia coli JW0838 potF; Putrescine transport protein PotF (85.9% evalue=0); putrescine ABC transporter periplasmic-binding protein 1622527..1623636 Yersinia pseudotuberculosis IP 32953 2956297 YP_069894.1 CDS potG NC_006155.1 1623807 1624940 D part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 1623807..1624940 Yersinia pseudotuberculosis IP 32953 2956298 YP_069895.1 CDS potH NC_006155.1 1624965 1625930 D similar to Yersinia pestis YPO1333 potH; putrescine transport system permease (99.3% evalue=0); Salmonella typhimurium STM0879 potH; ABC superfamily (membrane), putrescine transporter (80.6% evalue=1.E-149); putrescine ABC transporter membrane protein 1624965..1625930 Yersinia pseudotuberculosis IP 32953 2956299 YP_069896.1 CDS YPTB1365 NC_006155.1 1626876 1627340 D similar to Yersinia pestis YPO1335 membrane protein (99.3% evalue=3.E-84); Salmonella typhi STY0914 membrane protein (42.3% evalue=4.E-27); hypothetical protein 1626876..1627340 Yersinia pseudotuberculosis IP 32953 2953608 YP_069897.1 CDS rumB NC_006155.1 1627424 1628554 D RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1627424..1628554 Yersinia pseudotuberculosis IP 32953 2953609 YP_069898.1 CDS artJ NC_006155.1 1628681 1629412 R similar to Escherichia coli b0860 artJ; L-arginine transport system substrate-binding protein (78.6% evalue=1.E-110); Escherichia coli JW0844 artJ; Arginine-binding protein ArtJ (78.6% evalue=1.E-110); arginine ABC transporter substrate-binding protein artJ complement(1628681..1629412) Yersinia pseudotuberculosis IP 32953 2955236 YP_069899.1 CDS YPTB1368 NC_006155.1 1630182 1631108 D similar to Yersinia pestis YPO1342 SPFH domain protein (100% evalue=1.E-169); Thermotoga maritima TM1823 ftsH protease activity modulator HflC (25% evalue=2.E-14); SPFH domain-containing protein 1630182..1631108 Yersinia pseudotuberculosis IP 32953 2953610 YP_069900.1 CDS YPTB1369 NC_006155.1 1631477 1632613 D similar to Yersinia pestis YPO1343 periplasmic binding protein (99.4% evalue=0); Agrobacterium tumefaciens Atu3391 ABC transporter, substrate binding protein [iron] (25.3% evalue=4.E-30); periplasmic iron/siderophore binding protein 1631477..1632613 Yersinia pseudotuberculosis IP 32953 2953611 YP_069901.1 CDS YPTB1370 NC_006155.1 1632613 1633671 D similar to Yersinia pestis YPO1344 FecCD transport family protein (100% evalue=1.E-83); Sinorhizobium meliloti SMb21430 iron ABC transporter permease (47.9% evalue=3.E-82); FecCD ABC type transporter, permease 1632613..1633671 Yersinia pseudotuberculosis IP 32953 2953612 YP_069902.1 CDS YPTB1371 NC_006155.1 1633668 1634453 D similar to Yersinia pestis YPO1345 transport ATP-binding protein (100% evalue=1.E-147); Agrobacterium tumefaciens Atu3388 fecE; ABC transporter, nucleotide binding/ATPase [iron] (36.2% evalue=6.E-36); iron ABC transporter ATP-binding protein 1633668..1634453 Yersinia pseudotuberculosis IP 32953 2953613 YP_069903.1 CDS YPTB1372 NC_006155.1 1634450 1635238 D similar to Yersinia pestis YPO1346 conserved hypothetical protein (98.8% evalue=1.E-146); Pseudomonas aeruginosa PA4836 hypothetical protein (33.7% evalue=1.E-30); hypothetical protein 1634450..1635238 Yersinia pseudotuberculosis IP 32953 2953614 YP_069904.1 CDS YPTB1373 NC_006155.1 1635231 1636601 D similar to Yersinia pestis YPO1347 exported protein (100% evalue=0); Pseudomonas aeruginosa PA4835 hypothetical protein (40% evalue=9.E-81); hypothetical protein 1635231..1636601 Yersinia pseudotuberculosis IP 32953 2953615 YP_069905.1 CDS YPTB1374 NC_006155.1 1636598 1637443 D similar to Yersinia pestis YPO1348 membrane protein (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA4834 hypothetical protein (55.9% evalue=3.E-86); drug/metabolite family efflux pump 1636598..1637443 Yersinia pseudotuberculosis IP 32953 2953616 YP_069906.1 CDS artM NC_006155.1 1637651 1638319 R with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM complement(1637651..1638319) Yersinia pseudotuberculosis IP 32953 2955237 YP_069907.1 CDS artQ NC_006155.1 1638319 1639035 R with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ complement(1638319..1639035) Yersinia pseudotuberculosis IP 32953 2955239 YP_069908.1 CDS artI NC_006155.1 1639047 1639778 R similar to Yersinia pestis YPO1351 artI; arginine-binding periplasmic protein 1 precursor (100% evalue=1.E-136); Salmonella typhimurium STM0890 artI; ABC superfamily (bind_prot), arginine transport system (74.8% evalue=1.E-106); arginine-ABC transporter substrate-binding protein artI complement(1639047..1639778) Yersinia pseudotuberculosis IP 32953 2955235 YP_069909.1 CDS artP NC_006155.1 1639799 1640527 R With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit complement(1639799..1640527) Yersinia pseudotuberculosis IP 32953 2955238 YP_069910.1 CDS YPTB1379 NC_006155.1 1640822 1641382 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(1640822..1641382) Yersinia pseudotuberculosis IP 32953 2953617 YP_069911.1 CDS YPTB1380 NC_006155.1 1641552 1642127 R induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; lipoprotein complement(1641552..1642127) Yersinia pseudotuberculosis IP 32953 2953618 YP_069912.1 CDS YPTB1381 NC_006155.1 1642224 1643231 R similar to Yersinia pestis YPO1355 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM0932 nucleoside-diphosphate-sugar epimerase (74.4% evalue=1.E-146); hypothetical protein complement(1642224..1643231) Yersinia pseudotuberculosis IP 32953 2953619 YP_069913.1 CDS YPTB1382 NC_006155.1 1643331 1644821 R similar to Yersinia pestis YPO1356 membrane protein (99.7% evalue=0); Salmonella typhimurium STM0933 ybjT; nucleoside-diphosphate-sugar epimerase (63.2% evalue=1.E-172); hypothetical protein complement(1643331..1644821) Yersinia pseudotuberculosis IP 32953 2953620 YP_069914.1 CDS ltaA NC_006155.1 1644818 1645837 R low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; L-threonine aldolase complement(1644818..1645837) Yersinia pseudotuberculosis IP 32953 2955973 YP_069915.1 CDS poxB NC_006155.1 1646186 1647907 R catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase complement(1646186..1647907) Yersinia pseudotuberculosis IP 32953 2956302 YP_069916.1 CDS hcr NC_006155.1 1648051 1649073 R similar to Yersinia pestis YPO1359 hcr; oxidoreductase (99.7% evalue=0); Escherichia coli JW0856 hcr; NADH oxidoreductase for the HCP (59.5% evalue=1.E-104); HCP oxidoreductase complement(1648051..1649073) Yersinia pseudotuberculosis IP 32953 2955772 YP_069917.1 CDS hcp NC_006155.1 1649187 1650839 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(1649187..1650839) Yersinia pseudotuberculosis IP 32953 2955771 YP_069918.1 CDS YPTB1387 NC_006155.1 1651041 1651937 R similar to Yersinia pestis YPO1361 membrane protein (99.6% evalue=1.E-163); Salmonella typhimurium STM0938 ybjE; inner membrane protein (73.1% evalue=1.E-119); hypothetical protein complement(1651041..1651937) Yersinia pseudotuberculosis IP 32953 2953621 YP_069919.1 CDS YPTB1388 NC_006155.1 1652290 1653957 D similar to Yersinia pestis YPO1362 conserved hypothetical protein (100% evalue=0); Escherichia coli b0876 ybjD; hypothetical 63.6 kD protein in aqpZ-cspD intergenic region (64.4% evalue=0); hypothetical protein 1652290..1653957 Yersinia pseudotuberculosis IP 32953 2953622 YP_069920.1 CDS YPTB1389 NC_006155.1 1654094 1655041 R similar to Yersinia pestis YPO1363 virulence factor (100% evalue=0); Escherichia coli b0877 ybjX; hypothetical 38.4 kD protein in aqpZ-cspD intergenic region (46.3% evalue=8.E-74); virulence factor complement(1654094..1655041) Yersinia pseudotuberculosis IP 32953 2953623 YP_069921.1 CDS YPTB1390 NC_006155.1 1655275 1656390 D confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA 1655275..1656390 Yersinia pseudotuberculosis IP 32953 2953624 YP_069922.1 CDS YPTB1391 NC_006155.1 1656390 1658339 D with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease 1656390..1658339 Yersinia pseudotuberculosis IP 32953 2953625 YP_069923.1 CDS cspD NC_006155.1 1658620 1658883 R similar to Yersinia pestis YPO1366 cspD, cspH; cold shock-like protein (100% evalue=5.E-47); Salmonella typhimurium STM0943 cspD; similar to CspA but not cold shock induced (88.8% evalue=3.E-34); cold shock-like protein complement(1658620..1658883) Yersinia pseudotuberculosis IP 32953 2955373 YP_069924.1 CDS clpS NC_006155.1 1659244 1659564 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1659244..1659564 Yersinia pseudotuberculosis IP 32953 2953626 YP_069925.1 CDS clpA NC_006155.1 1659590 1661866 D ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 1659590..1661866 Yersinia pseudotuberculosis IP 32953 2955332 YP_069926.1 CDS infA NC_006155.1 1662279 1662497 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1662279..1662497) Yersinia pseudotuberculosis IP 32953 2955884 YP_069927.1 CDS aat NC_006155.1 1662663 1663373 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1662663..1663373) Yersinia pseudotuberculosis IP 32953 2955153 YP_069928.1 CDS cydC NC_006155.1 1663592 1665316 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(1663592..1665316) Yersinia pseudotuberculosis IP 32953 2955391 YP_069929.1 CDS cydD NC_006155.1 1665319 1667103 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(1665319..1667103) Yersinia pseudotuberculosis IP 32953 2955392 YP_069930.1 CDS trxB NC_006155.1 1667544 1668506 R similar to Yersinia pestis YPO1374 trxB; thioredoxin reductase (100% evalue=0); Escherichia coli ECs0973 thioredoxin reductase (85% evalue=1.E-156); thioredoxin reductase complement(1667544..1668506) Yersinia pseudotuberculosis IP 32953 2956837 YP_069931.1 CDS lrp NC_006155.1 1669274 1669768 D mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1669274..1669768 Yersinia pseudotuberculosis IP 32953 2955971 YP_069932.1 CDS ftsK NC_006155.1 1669891 1673823 D similar to Yersinia pestis YPO1376 ftsK; cell division protein (99% evalue=0); Salmonella typhi STY0958 ftsK; cell division protein FtsK (54.2% evalue=0); cell division protein 1669891..1673823 Yersinia pseudotuberculosis IP 32953 2955656 YP_069933.1 CDS lolA NC_006155.1 1674015 1674623 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1674015..1674623 Yersinia pseudotuberculosis IP 32953 2955957 YP_069934.1 CDS YPTB1403 NC_006155.1 1674634 1675977 D similar to Yersinia pestis YPO1378 ATPase (99.7% evalue=0); Escherichia coli JW0875 ycaJ; Hypothetical protein (86.3% evalue=0); recombination factor protein RarA 1674634..1675977 Yersinia pseudotuberculosis IP 32953 2953627 YP_069935.1 CDS serS NC_006155.1 1676219 1677511 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1676219..1677511 Yersinia pseudotuberculosis IP 32953 2956597 YP_069936.1 CDS YPTB1405 NC_006155.1 1677806 1678954 D similar to Yersinia pestis YPO1380 membrane protein (100% evalue=0); Escherichia coli Z1244 ycaD; transport (65.9% evalue=1.E-149); MFS family transporter protein 1677806..1678954 Yersinia pseudotuberculosis IP 32953 2953628 YP_069937.1 CDS pflA NC_006155.1 1679108 1679842 R activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 complement(1679108..1679842) Yersinia pseudotuberculosis IP 32953 2956239 YP_069938.1 CDS YPTB1407 NC_006155.1 1680829 1681503 D similar to Yersinia pestis YPO1382 hypothetical protein (100% evalue=1.E-131); hypothetical protein 1680829..1681503 Yersinia pseudotuberculosis IP 32953 2953629 YP_069939.1 CDS pflB NC_006155.1 1681621 1683903 R similar to Yersinia pestis YPO1383 pflB, pfl, YPO1383; formate acetyltransferase 1 (100% evalue=0); Escherichia coli JW0886 pflB; Formate c-acetyltransferase. (90.5% evalue=0); formate acetyltransferase 1 complement(1681621..1683903) Yersinia pseudotuberculosis IP 32953 2956240 YP_069940.1 CDS focA NC_006155.1 1683959 1684816 R similar to Yersinia pestis YPO1384 focA; formate transporter 1 (99.6% evalue=1.E-164); Escherichia coli JW0887 focA; probable formate transporter (82.4% evalue=1.E-137); formate transporter complement(1683959..1684816) Yersinia pseudotuberculosis IP 32953 2955629 YP_069941.1 CDS YPTB1410 NC_006155.1 1685513 1687279 R similar to Yersinia pestis YPO1385 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0988 hypothetical protein (80.3% evalue=0); hypothetical protein complement(1685513..1687279) Yersinia pseudotuberculosis IP 32953 2953630 YP_069942.1 CDS ansB NC_006155.1 1687428 1688465 D catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II 1687428..1688465 Yersinia pseudotuberculosis IP 32953 2955196 YP_069943.1 CDS YPTB1412 NC_006155.1 1688784 1689878 D similar to Yersinia pestis YPO1388 exported protein (37.6% evalue=1.E-57); hypothetical protein 1688784..1689878 Yersinia pseudotuberculosis IP 32953 2953631 YP_069944.1 CDS YPTB1413 NC_006155.1 1689878 1691746 D similar to Yersinia pestis YPO1388 exported protein (99% evalue=0); hypothetical protein 1689878..1691746 Yersinia pseudotuberculosis IP 32953 2953632 YP_069945.1 CDS serC NC_006155.1 1692113 1693198 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1692113..1693198 Yersinia pseudotuberculosis IP 32953 2956596 YP_069946.1 CDS aroA NC_006155.1 1693376 1694662 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1693376..1694662 Yersinia pseudotuberculosis IP 32953 2955221 YP_069947.1 CDS cmk NC_006155.1 1694976 1695668 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1694976..1695668 Yersinia pseudotuberculosis IP 32953 2955342 YP_069948.1 CDS rpsA NC_006155.1 1695842 1697515 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1695842..1697515 Yersinia pseudotuberculosis IP 32953 2956530 YP_069949.1 CDS ihfB NC_006155.1 1697576 1697860 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 1697576..1697860 Yersinia pseudotuberculosis IP 32953 2955868 YP_069950.1 CDS YPTB1419 NC_006155.1 1698393 1700684 D similar to Yersinia pestis YPO1394 membrane protein (99.8% evalue=0); Escherichia coli ECs0996 hypothetical protein (41.8% evalue=1.E-168); hypothetical protein 1698393..1700684 Yersinia pseudotuberculosis IP 32953 2953633 YP_069951.1 CDS msbA NC_006155.1 1700720 1702468 D involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding protein/permease 1700720..1702468 Yersinia pseudotuberculosis IP 32953 2956083 YP_069952.1 CDS lpxK NC_006155.1 1702465 1703451 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1702465..1703451 Yersinia pseudotuberculosis IP 32953 2955970 YP_069953.1 CDS YPTB1422 NC_006155.1 1703459 1704904 R similar to Yersinia pestis YPO1397 conserved hypothetical protein (98.9% evalue=0); Sinorhizobium meliloti SMc04383 conserved hypothetical protein (51.5% evalue=1.E-133); hypothetical protein complement(1703459..1704904) Yersinia pseudotuberculosis IP 32953 2953634 YP_069954.1 CDS cspB NC_006155.1 1705623 1705832 D similar to Yersinia pestis YPO2595 cspE; cold shock protein (57.1% evalue=5.E-14); cold shock-like protein 1705623..1705832 Yersinia pseudotuberculosis IP 32953 2955368 YP_069955.1 CDS YPTB1424 NC_006155.1 1706380 1706562 D similar to Yersinia pestis YPO1399 conserved hypothetical protein (100% evalue=9.E-30); Salmonella typhimurium STM0987 ycaR; inner membrane protein (77.1% evalue=1.E-21); hypothetical protein 1706380..1706562 Yersinia pseudotuberculosis IP 32953 2953635 YP_069956.1 CDS kdsB NC_006155.1 1706559 1707311 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1706559..1707311 Yersinia pseudotuberculosis IP 32953 2955919 YP_069957.1 CDS YPTB1426 NC_006155.1 1707674 1708567 D similar to Yersinia pestis YPO1401 conserved hypothetical protein (99.3% evalue=1.E-171); Salmonella typhimurium STM0989 mukF protein (killing factor KicB) (54.3% evalue=2.E-93); hypothetical protein 1707674..1708567 Yersinia pseudotuberculosis IP 32953 2953636 YP_069958.1 CDS smtA NC_006155.1 1709395 1710180 D involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 1709395..1710180 Yersinia pseudotuberculosis IP 32953 2956617 YP_069959.1 CDS mukF NC_006155.1 1710177 1711499 D acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1710177..1711499 Yersinia pseudotuberculosis IP 32953 2956097 YP_069960.1 CDS mukE NC_006155.1 1711507 1712208 D acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1711507..1712208 Yersinia pseudotuberculosis IP 32953 2956096 YP_069961.1 CDS mukB NC_006155.1 1712205 1716662 D SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1712205..1716662 Yersinia pseudotuberculosis IP 32953 2956095 YP_069962.1 CDS YPTB1431 NC_006155.1 1716910 1718766 D similar to Yersinia pestis YPO1407 exported protein (100% evalue=0); Salmonella typhi STY0997 ycbB; exported protein (59.3% evalue=0); hypothetical protein 1716910..1718766 Yersinia pseudotuberculosis IP 32953 2953637 YP_069963.1 CDS YPTB1432 NC_006155.1 1718990 1719538 D similar to Yersinia pestis YPO1408 exported protein (100% evalue=1.E-103); Salmonella typhimurium STM0996 ycbK; outer membrane protein (82.4% evalue=3.E-82); hypothetical protein 1718990..1719538 Yersinia pseudotuberculosis IP 32953 2953638 YP_069964.1 CDS YPTB1433 NC_006155.1 1719599 1720246 D similar to Yersinia pestis YPO1409 metallo-beta-lactamase superfamily protein (99.5% evalue=1.E-125); Escherichia coli ECs1010 hypothetical protein (71.1% evalue=5.E-94); metallo-beta-lactamase superfamily protein 1719599..1720246 Yersinia pseudotuberculosis IP 32953 2953639 YP_069965.1 CDS aspC NC_006155.1 1720670 1721860 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1720670..1721860) Yersinia pseudotuberculosis IP 32953 2955248 YP_069966.1 CDS YPTB1435 NC_006155.1 1722117 1723199 R similar to Yersinia pestis YPO1411 outer membrane porin C protein (93.6% evalue=0); Salmonella typhimurium STM1473 ompN; outer membrane protein N, non-specific porin (66.2% evalue=1.E-141); porin complement(1722117..1723199) Yersinia pseudotuberculosis IP 32953 2953640 YP_069967.1 CDS asnC NC_006155.1 1723497 1724897 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1723497..1724897) Yersinia pseudotuberculosis IP 32953 2955245 YP_069968.1 CDS pncB NC_006155.1 1725411 1726616 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1725411..1726616) Yersinia pseudotuberculosis IP 32953 2956289 YP_069969.1 CDS pepN NC_006155.1 1727332 1729947 D similar to Yersinia pestis YPO1414 pepN; aminopeptidase N (99.6% evalue=0); Salmonella typhimurium STM1057 pepN; aminopeptidase N (77.5% evalue=0); aminopeptidase 1727332..1729947 Yersinia pseudotuberculosis IP 32953 2956233 YP_069970.1 CDS pyrD NC_006155.1 1730592 1731602 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1730592..1731602 Yersinia pseudotuberculosis IP 32953 2956386 YP_069971.1 CDS YPTB1440 NC_006155.1 1731785 1732336 D similar to Yersinia pestis YPO1416 conserved hypothetical protein (99.4% evalue=1.E-102); Salmonella typhi STY1080 conserved hypothetical protein (67.6% evalue=2.E-61); hypothetical protein 1731785..1732336 Yersinia pseudotuberculosis IP 32953 2953641 YP_069972.1 CDS YPTB1441 NC_006155.1 1732362 1733474 R similar to Yersinia pestis YPO1417 iron-sulfur binding protein (99.7% evalue=0); Escherichia coli Z1297 hypothetical protein (68.8% evalue=1.E-151); iron-sulfur binding protein complement(1732362..1733474) Yersinia pseudotuberculosis IP 32953 2953642 YP_069973.1 CDS rlmL NC_006155.1 1733574 1735694 D catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1733574..1735694 Yersinia pseudotuberculosis IP 32953 2953643 YP_069974.1 CDS uup NC_006155.1 1735700 1737613 D Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1735700..1737613 Yersinia pseudotuberculosis IP 32953 2956880 YP_069975.1 CDS pqiA NC_006155.1 1737742 1739028 D similar to Yersinia pestis YPO1420 pqiA; paraquat-inducible protein A (99.2% evalue=0); Escherichia coli JW0933 pqiA; Paraquat-inducible protein A (70.4% evalue=1.E-175); paraquat-inducible protein A 1737742..1739028 Yersinia pseudotuberculosis IP 32953 2956313 YP_069976.1 CDS pqiB NC_006155.1 1739042 1740667 D similar to Yersinia pestis YPO1421 pqiB; paraquat-inducible protein B (99.8% evalue=0); Salmonella typhi STY1085 pqiB; secreted protein (69.7% evalue=0); paraquat-inducible protein B 1739042..1740667 Yersinia pseudotuberculosis IP 32953 2956314 YP_069977.1 CDS YPTB1446 NC_006155.1 1740664 1741260 D similar to Yersinia pestis YPO1422 lipoprotein protein (96.9% evalue=1.E-104); Salmonella typhi STY1086 lipoprotein (56% evalue=3.E-59); lipoprotein 1740664..1741260 Yersinia pseudotuberculosis IP 32953 2953644 YP_069978.1 CDS YPTB1447 NC_006155.1 1741309 1741449 D similar to Yersinia pestis YPO1423 hypothetical protein, 100% identical; hypothetical protein 1741309..1741449 Yersinia pseudotuberculosis IP 32953 2953645 YP_069979.1 CDS rmf NC_006155.1 1741530 1741697 D similar to Yersinia pestis YPO1423a rmf; ribosome modulation factor (100% evalue=2.E-26); Salmonella typhimurium STM1066 rmf; ribosome modulation factor (involved in dimerization of 70S ribosomes) (81.8% evalue=4.E-21); ribosome modulation factor 1741530..1741697 Yersinia pseudotuberculosis IP 32953 2956465 YP_069980.1 CDS fabF2 NC_006155.1 1741759 1743033 R FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase complement(1741759..1743033) Yersinia pseudotuberculosis IP 32953 2955517 YP_069981.1 CDS fabA NC_006155.1 1743733 1744251 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(1743733..1744251) Yersinia pseudotuberculosis IP 32953 2955513 YP_069982.1 CDS YPTB1451 NC_006155.1 1744320 1746092 R similar to Yersinia pestis YPO1431 Lon protease (99.8% evalue=0); Escherichia coli JW0938 Lon protease (lon) homolog (57.9% evalue=0); Lon protease complement(1744320..1746092) Yersinia pseudotuberculosis IP 32953 2953646 YP_069983.1 CDS YPTB1452 NC_006155.1 1746282 1746737 D similar to Yersinia pestis YPO1433 conserved hypothetical protein (100% evalue=3.E-82); Escherichia coli b0956 ycbG; hypothetical 17.7 kD protein in fabA-ompA intergenic region (80% evalue=1.E-64); hypothetical protein 1746282..1746737 Yersinia pseudotuberculosis IP 32953 2953647 YP_069984.1 CDS ompA NC_006155.1 1746843 1747904 R OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein OmpA complement(1746843..1747904) Yersinia pseudotuberculosis IP 32953 2956188 YP_069985.1 CDS sulA NC_006155.1 1748262 1748768 R similar to Yersinia pestis YPO1436 sulA, sfiA; cell division inhibitor (99.4% evalue=7.E-93); Escherichia coli b0958 sulA, sfiA; cell division inhibitor (60.5% evalue=1.E-41); SOS cell division inhibitor complement(1748262..1748768) Yersinia pseudotuberculosis IP 32953 2956652 YP_069986.1 CDS YPTB1455 NC_006155.1 1748997 1749632 D similar to Yersinia pestis YPO1437 conserved hypothetical protein (100% evalue=1.E-117); Escherichia coli b0959 hypothetical protein (44.6% evalue=7.E-34); hypothetical protein 1748997..1749632 Yersinia pseudotuberculosis IP 32953 2953648 YP_069987.1 CDS YPTB1456 NC_006155.1 1749734 1751872 R similar to Yersinia pestis YPO1438 membrane protein (99.4% evalue=0); Salmonella typhi STY1095 membrane protein (71.7% evalue=0); efflux transporter (PET) family protein complement(1749734..1751872) Yersinia pseudotuberculosis IP 32953 2953649 YP_069988.1 CDS YPTB1457 NC_006155.1 1751902 1752348 R similar to Yersinia pestis YPO1439 membrane protein (99.3% evalue=2.E-81); Escherichia coli b0961 yccF; hypothetical 16.3 kD protein in sulA-helD intergenic region (78% evalue=6.E-63); hypothetical protein complement(1751902..1752348) Yersinia pseudotuberculosis IP 32953 2953650 YP_069989.1 CDS helD NC_006155.1 1752542 1754596 D catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1752542..1754596 Yersinia pseudotuberculosis IP 32953 2953651 YP_069990.1 CDS mgsA NC_006155.1 1754657 1755121 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(1754657..1755121) Yersinia pseudotuberculosis IP 32953 2956036 YP_069991.1 CDS YPTB1460 NC_006155.1 1755300 1755980 R similar to Yersinia pestis YPO1442 exported protein (100% evalue=1.E-127); Escherichia coli ECs1048 hypothetical protein (36.2% evalue=4.E-34); hypothetical protein complement(1755300..1755980) Yersinia pseudotuberculosis IP 32953 2953652 YP_069992.1 CDS YPTB1461 NC_006155.1 1756296 1756712 D similar to Yersinia pestis YPO1443 conserved hypothetical protein (100% evalue=2.E-73); Salmonella typhi STY1101 conserved hypothetical protein (72.2% evalue=1.E-51); hypothetical protein 1756296..1756712 Yersinia pseudotuberculosis IP 32953 2953653 YP_069993.1 CDS YPTB1462 NC_006155.1 1756821 1757162 R similar to Yersinia pestis YPO1444 conserved hypothetical protein (100% evalue=2.E-57); Salmonella typhi STY1102 conserved hypothetical protein (79% evalue=8.E-43); heat shock protein HspQ complement(1756821..1757162) Yersinia pseudotuberculosis IP 32953 2953654 YP_069994.1 CDS YPTB1463 NC_006155.1 1757199 1758389 R similar to Yersinia pestis YPO1445 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0950 yccW; Hypothetical protein (80.5% evalue=0); hypothetical protein complement(1757199..1758389) Yersinia pseudotuberculosis IP 32953 2953655 YP_069995.1 CDS YPTB1464 NC_006155.1 1758483 1758761 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 1758483..1758761 Yersinia pseudotuberculosis IP 32953 2953656 YP_069996.1 CDS YPTB1465 NC_006155.1 1758813 1759139 R similar to Yersinia pestis YPO1447 sulfite reductase subunit protein (99% evalue=4.E-58); Escherichia coli ECs1053 sulfite reductase (80.7% evalue=4.E-46); sulfite reductase subunit protein complement(1758813..1759139) Yersinia pseudotuberculosis IP 32953 2953657 YP_069997.1 CDS YPTB1469 NC_006155.1 1762466 1764883 R similar to Yersinia pestis YPO1451 oxidoreductase (99.7% evalue=0); Mycobacterium tuberculosis_CDC1551MT1824 oxidoreductase, FAD-binding (31.8% evalue=1.E-47); oxidoreductase complement(1762466..1764883) Yersinia pseudotuberculosis IP 32953 2953660 YP_069998.1 CDS YPTB1470 NC_006155.1 1765037 1765783 R similar to Yersinia pestis YPO1452 short chain dehydrogenase (100% evalue=1.E-136); Mesorhizobium loti mlr7055 probable dehydrogenase (44% evalue=7.E-53); short chain dehydrogenase complement(1765037..1765783) Yersinia pseudotuberculosis IP 32953 2953661 YP_069999.1 CDS YPTB1471 NC_006155.1 1766412 1766732 D similar to Yersinia pestis YPO1453 hypothetical protein (100% evalue=1.E-58); hypothetical protein 1766412..1766732 Yersinia pseudotuberculosis IP 32953 2953662 YP_070000.1 CDS YPTB1472 NC_006155.1 1767062 1767520 D similar to Yersinia pestis YPO1454 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase (99.3% evalue=4.E-84); C. pneumoniae_J138 fabZ myristoyl-acyl carrier dehydratase (35% evalue=5.E-14); (3R)-hydroxymyristoyl-ACP dehydratase 1767062..1767520 Yersinia pseudotuberculosis IP 32953 2953663 YP_070001.1 CDS YPTB1473 NC_006155.1 1767510 1768793 D similar to Yersinia pestis YPO1455 beta-ketoacyl-[acyl-carrier-protein] synthase (99.2% evalue=0); Neisseria meningitidis NMB0219 3-oxoacyl-(acyl-carrier-protein) synthase II (33.4% evalue=1.E-58); 3-ketoacyl-ACP synthase 1767510..1768793 Yersinia pseudotuberculosis IP 32953 2953664 YP_070002.1 CDS YPTB1474 NC_006155.1 1768786 1769532 D similar to Yersinia pestis YPO1456 beta-ketoacyl-[acyl-carrier-protein] reductase (99.5% evalue=1.E-138); B. halodurans BH2491 fabG; 3-oxoacyl-(acyl-carrier protein) reductase (35.7% evalue=5.E-36); 3-ketoacyl-ACP reductase 1768786..1769532 Yersinia pseudotuberculosis IP 32953 2953665 YP_070003.1 CDS YPTB1475 NC_006155.1 1769548 1770786 D similar to Yersinia pestis YPO1457 hydroxymethylglutaryl-coenzyme A synthase (100% evalue=0); Bacillus subtilis BG10926 pksG; polyketide biosynthesis protein pksG (34.4% evalue=8.E-56); hydroxymethylglutaryl-CoA synthase 1769548..1770786 Yersinia pseudotuberculosis IP 32953 2953666 YP_070004.1 CDS YPTB1476 NC_006155.1 1770779 1771498 D similar to Yersinia pestis YPO1458 enoyl-CoA hydratase (100% evalue=1.E-133); Ralstonia solanacearum RS03234 enoyl-CoA hydratase (25.7% evalue=4.E-14); enoyl-CoA hydratase 1770779..1771498 Yersinia pseudotuberculosis IP 32953 2953667 YP_070005.1 CDS YPTB1477 NC_006155.1 1771491 1772252 D involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1771491..1772252 Yersinia pseudotuberculosis IP 32953 2953668 YP_070006.1 CDS YPTB1478 NC_006155.1 1772255 1773043 D similar to Yersinia pestis YPO1460 short chain dehydrogenase (100% evalue=1.E-150); Thermoplasma volcanium TVG1417421 3-oxoacyl-acyl carrier protein reductase (27.9% evalue=2.E-15); 3-oxoacyl-ACP reductase 1772255..1773043 Yersinia pseudotuberculosis IP 32953 2953669 YP_070007.1 CDS YPTB1479 NC_006155.1 1773130 1773570 D similar to Yersinia pestis YPO1461 hypothetical protein (100% evalue=3.E-83); hypothetical protein 1773130..1773570 Yersinia pseudotuberculosis IP 32953 2953670 YP_070008.1 CDS YPTB1480 NC_006155.1 1773608 1773856 D similar to Yersinia pestis YPO1462 acyl carrier protein (100% evalue=6.E-39); acyl carrier protein 1773608..1773856 Yersinia pseudotuberculosis IP 32953 2953671 YP_070009.1 CDS YPTB1481 NC_006155.1 1773955 1774803 D similar to Yersinia pestis YPO1463 acyl transferase (100% evalue=1.E-158); Bacillus subtilis BG12649 pksC; involved in polyketide synthesis (45% evalue=2.E-60); acyl transferase 1773955..1774803 Yersinia pseudotuberculosis IP 32953 2953672 YP_070010.1 CDS YPTB1482 NC_006155.1 1774960 1775127 D similar to Yersinia pestis YPO1464 hypothetical protein, 100% identical; hypothetical protein 1774960..1775127 Yersinia pseudotuberculosis IP 32953 2953673 YP_070011.1 CDS YPTB1483 NC_006155.1 1775792 1776292 D similar to Yersinia pestis YPO1465 conserved hypothetical protein (97.5% evalue=5.E-86); hypothetical protein 1775792..1776292 Yersinia pseudotuberculosis IP 32953 2953674 YP_070012.1 CDS YPTB1484 NC_006155.1 1776335 1777885 D similar to Yersinia pestis YPO1466 conserved hypothetical protein (99.8% evalue=0); hypothetical protein 1776335..1777885 Yersinia pseudotuberculosis IP 32953 2953675 YP_070013.1 CDS YPTB1485 NC_006155.1 1777897 1779249 D similar to Yersinia pestis YPO1467 conserved hypothetical protein (99.1% evalue=0); hypothetical protein 1777897..1779249 Yersinia pseudotuberculosis IP 32953 2953676 YP_070014.1 CDS YPTB1486 NC_006155.1 1779246 1779932 D similar to Yersinia pestis YPO1468 membrane protein (99.1% evalue=1.E-132); hypothetical protein 1779246..1779932 Yersinia pseudotuberculosis IP 32953 2953677 YP_070015.1 CDS YPTB1487 NC_006155.1 1779932 1781668 D similar to Yersinia pestis YPO1469 exported protein (100% evalue=0); OmpA family outer membrane protein 1779932..1781668 Yersinia pseudotuberculosis IP 32953 2953678 YP_070016.1 CDS YPTB1488 NC_006155.1 1781672 1782163 D similar to Yersinia pestis YPO1470 conserved hypothetical protein (100% evalue=5.E-93); hypothetical protein 1781672..1782163 Yersinia pseudotuberculosis IP 32953 2953679 YP_070017.1 CDS clpB3 NC_006155.1 1782551 1785199 D similar to Yersinia pestis YPO1471 ATPase subunit of ATP-dependent protease (95.6% evalue=0); Clp ATPase 1782551..1785199 Yersinia pseudotuberculosis IP 32953 2955336 YP_070018.1 CDS YPTB1490 NC_006155.1 1785196 1787694 D similar to Yersinia pestis YPO1472 conserved hypothetical protein (96.2% evalue=0); hypothetical protein 1785196..1787694 Yersinia pseudotuberculosis IP 32953 2953680 YP_070019.1 CDS YPTB1491 NC_006155.1 1787812 1789083 D hypothetical protein 1787812..1789083 Yersinia pseudotuberculosis IP 32953 2953681 YP_070020.1 CDS YPTB1492 NC_006155.1 1789090 1789482 D similar to Yersinia pestis YPO0982 lipoprotein (77.6% evalue=1.E-55); lipoprotein 1789090..1789482 Yersinia pseudotuberculosis IP 32953 2953682 YP_070021.1 CDS YPTB1493 NC_006155.1 1789798 1792500 D similar to Yersinia pestis YPO1472 conserved hypothetical protein (93.6% evalue=0); hypothetical protein 1789798..1792500 Yersinia pseudotuberculosis IP 32953 2953683 YP_070022.1 CDS YPTB1494 NC_006155.1 1792503 1792919 D similar to Salmonella typhi STY3343 exported protein (33% evalue=3.E-10); hypothetical protein 1792503..1792919 Yersinia pseudotuberculosis IP 32953 2953684 YP_070023.1 CDS YPTB1495 NC_006155.1 1792928 1794676 D LysM domain-containing protein 1792928..1794676 Yersinia pseudotuberculosis IP 32953 2953685 YP_070024.1 CDS YPTB1496 NC_006155.1 1794681 1795193 D similar to Salmonella typhi STY3285 exported protein (41.1% evalue=7.E-35); hypothetical protein 1794681..1795193 Yersinia pseudotuberculosis IP 32953 2953686 YP_070025.1 CDS YPTB1497 NC_006155.1 1796147 1797205 D similar to Yersinia pestis YPO1481 hypothetical protein (98.6% evalue=0); hypothetical protein 1796147..1797205 Yersinia pseudotuberculosis IP 32953 2953687 YP_070026.1 CDS YPTB1498 NC_006155.1 1797202 1800624 D similar to Yersinia pestis YPO1482 membrane protein (99.3% evalue=0); Ralstonia solanacearum RS01945 probable transmembrane protein (23.6% evalue=1.E-39); hypothetical protein 1797202..1800624 Yersinia pseudotuberculosis IP 32953 2953688 YP_070027.1 CDS YPTB1499 NC_006155.1 1800668 1802269 D similar to Yersinia pestis YPO1483 hypothetical protein (98.8% evalue=0); Pseudomonas aeruginosa PA1656 hypothetical protein (25.5% evalue=2.E-23); hypothetical protein 1800668..1802269 Yersinia pseudotuberculosis IP 32953 2953689 YP_070028.1 CDS YPTB1500 NC_006155.1 1802287 1803345 D similar to Yersinia pestis YPO1484 hypothetical protein (99.7% evalue=0); hypothetical protein 1802287..1803345 Yersinia pseudotuberculosis IP 32953 2953690 YP_070029.1 CDS YPTB1501 NC_006155.1 1803345 1803815 D hypothetical protein 1803345..1803815 Yersinia pseudotuberculosis IP 32953 2953691 YP_070030.1 CDS YPTB1502 NC_006155.1 1804036 1805799 D similar to Yersinia pestis YPO1485 conserved hypothetical protein (99.4% evalue=0); Vibrio cholerae VCA0110 hypothetical protein (30.3% evalue=4.E-67); hypothetical protein 1804036..1805799 Yersinia pseudotuberculosis IP 32953 2953692 YP_070031.1 CDS YPTB1503 NC_006155.1 1805763 1806848 D similar to Yersinia pestis YPO1486 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0228 hypothetical protein (30% evalue=3.E-27); hypothetical protein 1805763..1806848 Yersinia pseudotuberculosis IP 32953 2953693 YP_070032.1 CDS YPTB1504 NC_006155.1 1806724 1807425 D similar to Yersinia pestis YPO1487 conserved hypothetical protein (98.7% evalue=4.E-86); Salmonella typhimurium STM0280 outer membrane lipoprotein (28.3% evalue=2.E-11); hypothetical protein 1806724..1807425 Yersinia pseudotuberculosis IP 32953 2953694 YP_070033.1 CDS YPTB1505 NC_006155.1 1807425 1807877 D similar to Yersinia pestis YPO1488 conserved hypothetical protein (99.3% evalue=2.E-81); hypothetical protein 1807425..1807877 Yersinia pseudotuberculosis IP 32953 2953695 YP_070034.1 CDS YPTB1506 NC_006155.1 1807902 1809269 D similar to Yersinia pestis YPO1489 hypothetical protein (97.1% evalue=0); Escherichia coli ECs0217 hypothetical protein (30.7% evalue=2.E-50); hypothetical protein 1807902..1809269 Yersinia pseudotuberculosis IP 32953 2953696 YP_070035.1 CDS YPTB1507 NC_006155.1 1809481 1810104 R similar to Yersinia pestis YPO1492 hypothetical protein (30.7% evalue=3.E-10); hypothetical protein complement(1809481..1810104) Yersinia pseudotuberculosis IP 32953 2953697 YP_070036.1 CDS ybiT NC_006155.1 1810619 1812382 D similar to Yersinia pestis YPO1491 ybiT; ABC transporter ATP-binding protein (99.6% evalue=0); ABC transporter ATP-binding protein 1810619..1812382 Yersinia pseudotuberculosis IP 32953 2956967 YP_070037.1 CDS YPTB1509 NC_006155.1 1812610 1813257 D similar to Yersinia pestis YPO1492 hypothetical protein (93.9% evalue=1.E-113); hypothetical protein 1812610..1813257 Yersinia pseudotuberculosis IP 32953 2953698 YP_070038.1 CDS moeB NC_006155.1 1813329 1814099 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(1813329..1814099) Yersinia pseudotuberculosis IP 32953 2956065 YP_070039.1 CDS cspD NC_006155.1 1814101 1815375 R is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA complement(1814101..1815375) Yersinia pseudotuberculosis IP 32953 2955372 YP_070040.1 CDS YPTB1512 NC_006155.1 1815910 1817220 R similar to Yersinia pestis YPO1496 heme-binding protein (99.7% evalue=0); Salmonella typhimurium STM0036 arylsulfatase regulatory protein (25.8% evalue=3.E-29); heme-binding protein complement(1815910..1817220) Yersinia pseudotuberculosis IP 32953 2953699 YP_070041.1 CDS YPTB1513 NC_006155.1 1817230 1817898 R similar to Yersinia pestis YPO1497 ABC transporter ATP-binding protein (99% evalue=1.E-120); Bacillus subtilis BG13245 yknY; ABC transport system ATP-binding protein (47.2% evalue=6.E-53); ABC transporter ATP-binding protein complement(1817230..1817898) Yersinia pseudotuberculosis IP 32953 2953700 YP_070042.1 CDS YPTB1514 NC_006155.1 1817900 1819162 R similar to Yersinia pestis YPO1498 exported protein (98.3% evalue=0); A. aeolicus aq_294 protein (21.6% evalue=6.E-12); hypothetical protein complement(1817900..1819162) Yersinia pseudotuberculosis IP 32953 2953701 YP_070043.1 CDS YPTB1515 NC_006155.1 1819164 1821524 R similar to Yersinia pestis YPO1499 membrane protein (98.6% evalue=0); hypothetical protein complement(1819164..1821524) Yersinia pseudotuberculosis IP 32953 2953702 YP_070044.1 CDS YPTB1516 NC_006155.1 1822077 1822919 R similar to Yersinia pestis YPO1501 esterase (99.2% evalue=1.E-167); Escherichia coli JW2141 yeiG; esterase (73.5% evalue=1.E-124); esterase complement(1822077..1822919) Yersinia pseudotuberculosis IP 32953 2953703 YP_070045.1 CDS YPTB1517 NC_006155.1 1822940 1824079 R similar to Yersinia pestis YPO1502 probable alcohol dehydrogenase / formaldehyde dehydrogenase (glutathione) (99.7% evalue=0); Pseudomonas aeruginosa PA3629 adhC; alcohol dehydrogenase class III (78.9% evalue=1.E-175); alcohol dehydrogenase complement(1822940..1824079) Yersinia pseudotuberculosis IP 32953 2953704 YP_070046.1 CDS YPTB1518 NC_006155.1 1824352 1825221 R similar to Yersinia pestis YPO1503 LysR-family transcriptional regulatory protein (100% evalue=1.E-164); Pseudomonas aeruginosa PA1413 probable transcriptional regulator (53.7% evalue=1.E-79); LysR family transcriptional regulator complement(1824352..1825221) Yersinia pseudotuberculosis IP 32953 2953705 YP_070047.1 CDS YPTB1519 NC_006155.1 1825357 1826508 D similar to Yersinia pestis YPO1504 exported protein (100% evalue=0); Pseudomonas aeruginosa PA1412 hypothetical protein (45.8% evalue=8.E-79); major facilitator superfamily transporter 1825357..1826508 Yersinia pseudotuberculosis IP 32953 2953706 YP_070048.1 CDS folE NC_006155.1 1826650 1827354 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1826650..1827354 Yersinia pseudotuberculosis IP 32953 2955634 YP_070049.1 CDS yeiB NC_006155.1 1827400 1828575 D similar to Yersinia pestis YPO1506 yeiB; exported protein (99.4% evalue=0); Escherichia coli ECs3044 hypothetical protein (60.6% evalue=1.E-140); hypothetical protein 1827400..1828575 Yersinia pseudotuberculosis IP 32953 2957011 YP_070050.1 CDS mglB NC_006155.1 1829323 1830315 D similar to Yersinia pestis YPO1507 mglB; galactose-binding protein (98.5% evalue=0); Salmonella typhimurium STM2190 mglB; D-galactose-binding periplasmic protein (85.4% evalue=1.E-163); galactose ABC transporter substrate-binding protein 1829323..1830315 Yersinia pseudotuberculosis IP 32953 2956034 YP_070051.1 CDS mglA NC_006155.1 1830545 1832065 D with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 1830545..1832065 Yersinia pseudotuberculosis IP 32953 2956032 YP_070052.1 CDS mglC NC_006155.1 1832086 1833096 D ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 1832086..1833096 Yersinia pseudotuberculosis IP 32953 2956035 YP_070053.1 CDS sanA NC_006155.1 1833541 1834278 R similar to Yersinia pestis YPO1510 sanA; exported protein (100% evalue=1.E-138); Escherichia coli Z3399 sanA; vancomycin sensitivity (80% evalue=1.E-112); hypothetical protein complement(1833541..1834278) Yersinia pseudotuberculosis IP 32953 2956565 YP_070054.1 CDS sfcA NC_006155.1 1834559 1836256 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(1834559..1836256) Yersinia pseudotuberculosis IP 32953 2956599 YP_070055.1 CDS cdd NC_006155.1 1836612 1837496 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(1836612..1837496) Yersinia pseudotuberculosis IP 32953 2955314 YP_070056.1 CDS yohK NC_006155.1 1837822 1838517 R similar to Yersinia pestis YPO1513 yohK; membrane protein (99.5% evalue=1.E-126); Escherichia coli JW2130 yohK; Hypothetical protein (76.1% evalue=3.E-99); hypothetical protein complement(1837822..1838517) Yersinia pseudotuberculosis IP 32953 2957103 YP_070057.1 CDS yohJ NC_006155.1 1838514 1838921 R similar to Yersinia pestis YPO1514 yohJ; membrane protein (100% evalue=1.E-73); Salmonella typhimurium STM2181 yohJ; effector of murein hydrolase LrgA (68% evalue=2.E-45); hypothetical protein complement(1838514..1838921) Yersinia pseudotuberculosis IP 32953 2957102 YP_070058.1 CDS YPTB1530 NC_006155.1 1839163 1840344 R similar to Yersinia pestis YPO1515 multidrug resistance protein (100% evalue=0); Salmonella typhimurium STM1516 ydeE; MFS family transport protein (40.8% evalue=2.E-76); MFS multidrug efflux pump complement(1839163..1840344) Yersinia pseudotuberculosis IP 32953 2953707 YP_070059.1 CDS YPTB1531 NC_006155.1 1840695 1841948 R similar to Yersinia pestis YPO1516 hypothetical protein (99.7% evalue=0); hypothetical protein complement(1840695..1841948) Yersinia pseudotuberculosis IP 32953 2953708 YP_070060.1 CDS YPTB1532 NC_006155.1 1841966 1843042 R similar to Yersinia pestis YPO1517 sugar ABC transporter (100% evalue=0); Mesorhizobium loti mlr7288 ABC transporter binding protein (31.1% evalue=6.E-34); sugar ABC transporter complement(1841966..1843042) Yersinia pseudotuberculosis IP 32953 2953709 YP_070061.1 CDS YPTB1533 NC_006155.1 1843576 1844406 D similar to Yersinia pestis YPO1518 membrane protein (99.4% evalue=3.E-99); hypothetical protein 1843576..1844406 Yersinia pseudotuberculosis IP 32953 2953710 YP_070062.1 CDS metG NC_006155.1 1844535 1846562 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1844535..1846562) Yersinia pseudotuberculosis IP 32953 2956025 YP_070063.1 CDS YPTB1535 NC_006155.1 1846827 1847939 D similar to Yersinia pestis YPO1523 conserved hypothetical protein (100% evalue=0); Escherichia coli JW2100 mrp; Mrp protein. (76.7% evalue=1.E-166); ATPase 1846827..1847939 Yersinia pseudotuberculosis IP 32953 2953711 YP_070064.1 CDS udk NC_006155.1 1848184 1848825 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1848184..1848825 Yersinia pseudotuberculosis IP 32953 2956857 YP_070065.1 CDS dcd NC_006155.1 1848930 1849511 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1848930..1849511 Yersinia pseudotuberculosis IP 32953 2955433 YP_070066.1 CDS YPTB1538 NC_006155.1 1849698 1851554 D YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein 1849698..1851554 Yersinia pseudotuberculosis IP 32953 2953712 YP_070067.1 CDS YPTB1539 NC_006155.1 1851699 1853285 R similar to Yersinia pestis YPO1527 membrane protein (99.8% evalue=0); Salmonella typhimurium STM2119 yegH; inner membrane protein (72.1% evalue=0); CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps complement(1851699..1853285) Yersinia pseudotuberculosis IP 32953 2953713 YP_070068.1 CDS YPTB1540 NC_006155.1 1853727 1854506 D similar to Yersinia pestis YPO1528 ferric iron reductase (98.8% evalue=1.E-154); Escherichia coli b4367 fhuF; ferric hydroxamate transport protein fhuF (38.6% evalue=1.E-41); ferric hydroximate transport ferric iron reductase 1853727..1854506 Yersinia pseudotuberculosis IP 32953 2953714 YP_070069.1 CDS YPTB1541 NC_006155.1 1854657 1856204 D similar to Yersinia pestis YPO1529 decarboxylase (99.2% evalue=0); Anabaena all0395 L-2,4-diaminobutyrate decarboxylase (42.8% evalue=1.E-106); decarboxylase 1854657..1856204 Yersinia pseudotuberculosis IP 32953 2953715 YP_070070.1 CDS alcA NC_006155.1 1856239 1857537 D similar to Yersinia pestis YPO1530 alcA; siderophore biosynthetic enzyme (100% evalue=0); Anabaena all0392 probable monooxygenase (46% evalue=1.E-110); siderophore biosynthetic enzyme 1856239..1857537 Yersinia pseudotuberculosis IP 32953 2955184 YP_070071.1 CDS alcB NC_006155.1 1857537 1858115 D similar to Yersinia pestis YPO1531 alcB; siderophore biosynthetic enzyme (100% evalue=1.E-112); Anabaena all0393 hypothetical protein (25.6% evalue=2.E-17); siderophore biosynthetic enzyme 1857537..1858115 Yersinia pseudotuberculosis IP 32953 2955185 YP_070072.1 CDS alcC NC_006155.1 1858112 1859956 D similar to Yersinia pestis YPO1538 siderophore biosynthetic enzyme (46.8% evalue=1.E-157); siderophore biosynthetic enzyme 1858112..1859956 Yersinia pseudotuberculosis IP 32953 2955186 YP_070073.1 CDS YPTB1545 NC_006155.1 1860083 1860931 R similar to Yersinia pestis YPO1533 iron-siderophore transport system, ATP-binding component (99.6% evalue=1.E-156); Agrobacterium tumefaciens Atu5316 fepC; ABC transporter, nucleotide binding/ATPase [iron-siderophore] (53.7% evalue=3.E-75); iron-siderophore ABC transporter ATP-binding protein complement(1860083..1860931) Yersinia pseudotuberculosis IP 32953 2953716 YP_070074.1 CDS YPTB1546 NC_006155.1 1860928 1861968 R similar to Yersinia pestis YPO1534 iron-siderophore transport system, membrane permease component (100% evalue=0); Pseudomonas aeruginosa PA4161 fepG; ferric enterobactin transport system permease (37.9% evalue=7.E-45); iron-siderophore ABC transporter permease complement(1860928..1861968) Yersinia pseudotuberculosis IP 32953 2953717 YP_070075.1 CDS YPTB1547 NC_006155.1 1861955 1862995 R similar to Yersinia pestis YPO1535 iron-siderophore transport system, transmembrane component (99.7% evalue=0); Escherichia coli Z0732 fepD; ferric enterobactin (enterochelin) transport (42.9% evalue=9.E-61); iron-siderophore ABC transporter permease complement(1861955..1862995) Yersinia pseudotuberculosis IP 32953 2953718 YP_070076.1 CDS YPTB1548 NC_006155.1 1862992 1864071 R similar to Yersinia pestis YPO1536 iron-siderophore transport system, periplasmic binding protein (99.7% evalue=0); Agrobacterium tumefaciens AGR_pAT_447 DtxR/iron regulated lipoprotein precursor (34.1% evalue=1.E-43); iron-siderophore ABC transporter substrate-binding protein complement(1862992..1864071) Yersinia pseudotuberculosis IP 32953 2953719 YP_070077.1 CDS YPTB1549 NC_006155.1 1864161 1866422 R similar to Yersinia pestis YPO1537 iron-siderophore receptor (99.7% evalue=0); Salmonella typhimurium STM1204 fhuE; outer membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid uptake (36.9% evalue=1.E-128); OMR family iron-siderophore receptor complement(1864161..1866422) Yersinia pseudotuberculosis IP 32953 2953720 YP_070078.1 CDS YPTB1550 NC_006155.1 1866652 1868466 R similar to Yersinia pestis YPO1538 siderophore biosynthetic enzyme (99.6% evalue=0); siderophore biosynthetic enzyme complement(1866652..1868466) Yersinia pseudotuberculosis IP 32953 2953721 YP_070079.1 CDS galU NC_006155.1 1869413 1870303 D similar to Yersinia pestis YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase (100% evalue=1.E-168); Escherichia coli Z2012 galU; UTP--glucose-1-phosphate uridylyltransferase (73.4% evalue=1.E-122); UTP-glucose-1-phosphate uridylyltransferase 1869413..1870303 Yersinia pseudotuberculosis IP 32953 2955675 YP_070080.1 CDS galF NC_006155.1 1870387 1871280 D similar to Yersinia pestis YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase (100% evalue=1.E-167); Escherichia coli ECs2846 Galf transferase (65.3% evalue=1.E-107); UTP-glucose-1-phosphate uridylyltransferase 1870387..1871280 Yersinia pseudotuberculosis IP 32953 2955670 YP_070081.1 CDS gnd NC_006155.1 1871666 1873075 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1871666..1873075 Yersinia pseudotuberculosis IP 32953 2955732 YP_070082.1 CDS tnp NC_006155.1 1873396 1873854 D similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 1873396..1873854 Yersinia pseudotuberculosis IP 32953 2956711 YP_070083.1 CDS hisI NC_006155.1 1873985 1874599 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(1873985..1874599) Yersinia pseudotuberculosis IP 32953 2955796 YP_070084.1 CDS hisF NC_006155.1 1874593 1875369 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(1874593..1875369) Yersinia pseudotuberculosis IP 32953 2955793 YP_070085.1 CDS hisA NC_006155.1 1875351 1876088 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(1875351..1876088) Yersinia pseudotuberculosis IP 32953 2955789 YP_070086.1 CDS hisH NC_006155.1 1876094 1876684 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1876094..1876684) Yersinia pseudotuberculosis IP 32953 2955795 YP_070087.1 CDS hisB NC_006155.1 1876684 1877751 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(1876684..1877751) Yersinia pseudotuberculosis IP 32953 2955790 YP_070088.1 CDS hisC NC_006155.1 1877748 1878896 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1877748..1878896) Yersinia pseudotuberculosis IP 32953 2955791 YP_070089.1 CDS hisD NC_006155.1 1878899 1880230 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1878899..1880230) Yersinia pseudotuberculosis IP 32953 2955792 YP_070090.1 CDS hisG NC_006155.1 1880234 1881133 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(1880234..1881133) Yersinia pseudotuberculosis IP 32953 2955794 YP_070091.1 CDS YPTB1563 NC_006155.1 1881839 1882666 D similar to Yersinia pestis YPO1551 exported protein (100% evalue=1.E-157); Salmonella typhi STY2279 conserved hypothetical protein (65.3% evalue=6.E-99); hypothetical protein 1881839..1882666 Yersinia pseudotuberculosis IP 32953 2953722 YP_070092.1 CDS YPTB1564 NC_006155.1 1882973 1883629 R hypothetical protein complement(1882973..1883629) Yersinia pseudotuberculosis IP 32953 2953723 YP_070093.1 CDS YPTB1565 NC_006155.1 1884738 1885733 R similar to Yersinia pestis YPO1553 ribose transport system, permease (99.3% evalue=1.E-178); Mesorhizobium loti mlr7287 ABC transporter, permease (40.4% evalue=2.E-69); sugar ABC transporter permease complement(1884738..1885733) Yersinia pseudotuberculosis IP 32953 2953724 YP_070094.1 CDS YPTB1566 NC_006155.1 1885730 1887286 R similar to Agrobacterium tumefaciens Atu2819 rbsA; ABC transporter, nucleotide binding/ATPase [ribose] (39.2% evalue=2.E-97); Agrobacterium tumefaciens AGR_C_5112 ABC transporter protein, ATP binding component (39.2% evalue=2.E-97); sugar ABC transporter ATPase complement(1885730..1887286) Yersinia pseudotuberculosis IP 32953 2953725 YP_070095.1 CDS YPTB1567 NC_006155.1 1887572 1888663 D member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 1887572..1888663 Yersinia pseudotuberculosis IP 32953 2953726 YP_070096.1 CDS yeeF NC_006155.1 1889123 1890514 D similar to Yersinia pestis YPO1557 yeeF; Amino acid permease (99.7% evalue=0); Escherichia coli ECs2816 amino acid/amine transport protein (73.6% evalue=0); APC family amino acid permease 1889123..1890514 Yersinia pseudotuberculosis IP 32953 2957005 YP_070097.1 CDS sbcB NC_006155.1 1891312 1892742 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(1891312..1892742) Yersinia pseudotuberculosis IP 32953 2956571 YP_070098.1 CDS YPTB1570 NC_006155.1 1893005 1894144 D similar to Yersinia pestis YPO1559 hypothetical protein (99.4% evalue=0); Ralstonia solanacearum RS03845 signal peptide protein (37.5% evalue=1.E-58); hypothetical protein 1893005..1894144 Yersinia pseudotuberculosis IP 32953 2953727 YP_070099.1 CDS YPTB1571 NC_006155.1 1894578 1894895 D similar to Yersinia pestis YPO1560 conserved hypothetical protein (100% evalue=1.E-53); Escherichia coli Z3168 yeeX; alpha helix protein (84.1% evalue=3.E-44); hypothetical protein 1894578..1894895 Yersinia pseudotuberculosis IP 32953 2953728 YP_070100.1 CDS YPTB1572 NC_006155.1 1895039 1898266 R similar to Yersinia pestis YPO3944 invasin (35.3% evalue=1.E-145); invasin complement(1895039..1898266) Yersinia pseudotuberculosis IP 32953 2953729 YP_070101.1 CDS YPTB1573 NC_006155.1 1899210 1900610 D similar to Yersinia pestis YPO1563 transmembrane transporter (99.7% evalue=0); Salmonella typhi STY2520 transport protein (54.9% evalue=1.E-131); major facilitator superfamily anion:cation symporter family transporter 1899210..1900610 Yersinia pseudotuberculosis IP 32953 2953730 YP_070102.1 CDS YPTB1574 NC_006155.1 1900619 1901044 R similar to Yersinia pestis YPO1564 membrane protein (97.8% evalue=2.E-77); Bacillus subtilis BG10978 yuxK, yugD; unknown (39% evalue=2.E-22); hypothetical protein complement(1900619..1901044) Yersinia pseudotuberculosis IP 32953 2953731 YP_070103.1 CDS YPTB1575 NC_006155.1 1901469 1902209 D similar to Yersinia pestis YPO1565 oxidoreductase (100% evalue=1.E-135); Agrobacterium tumefaciens Atu4466 oxidoreductase (57.7% evalue=3.E-73); oxidoreductase 1901469..1902209 Yersinia pseudotuberculosis IP 32953 2953732 YP_070104.1 CDS YPTB1576 NC_006155.1 1902257 1903099 D similar to Yersinia pestis YPO1566 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase (99.6% evalue=1.E-164); Mesorhizobium loti mll4780 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (64.3% evalue=1.E-104); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1902257..1903099 Yersinia pseudotuberculosis IP 32953 2953733 YP_070105.2 CDS YPTB1577 NC_006155.1 1903131 1904408 D similar to Yersinia pestis YPO1567 racemase (100% evalue=0); Sinorhizobium meliloti SMb21113 enzyme similar to human rTSbeta protein (72.3% evalue=1.E-180); racemase 1903131..1904408 Yersinia pseudotuberculosis IP 32953 2953734 YP_070106.1 CDS lldD NC_006155.1 1904686 1905831 D flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 1904686..1905831 Yersinia pseudotuberculosis IP 32953 2955956 YP_070107.1 CDS argG NC_006155.1 1906036 1907403 R catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase complement(1906036..1907403) Yersinia pseudotuberculosis IP 32953 2955216 YP_070108.1 CDS yeeO NC_006155.1 1907697 1909127 D similar to Yersinia pestis YPO1571 yeeO; sugar transporter (100% evalue=0); Salmonella typhi STY2216 inner membrane protein (63.1% evalue=1.E-175); hypothetical protein 1907697..1909127 Yersinia pseudotuberculosis IP 32953 2957006 YP_070109.1 CDS YPTB1581 NC_006155.1 1909155 1910495 R similar to Yersinia pestis YPO1572 sugar transporter (100% evalue=0); Escherichia coli ECs3031 transport protein (24% evalue=1.E-21); MFS aromatic acid:H+ symporter complement(1909155..1910495) Yersinia pseudotuberculosis IP 32953 2953735 YP_070110.1 CDS YPTB1582 NC_006155.1 1910531 1911439 R similar to Yersinia pestis YPO1573 polysaccharide deacetylase (99.6% evalue=0); Helicobacter pylori_J99jhp0295 (75.3% evalue=1.E-133); polysaccharide deacetylase complement(1910531..1911439) Yersinia pseudotuberculosis IP 32953 2953736 YP_070111.1 CDS YPTB1583 NC_006155.1 1911989 1912684 D similar to Yersinia pestis YPO1574 exported protein (100% evalue=1.E-132); hypothetical protein 1911989..1912684 Yersinia pseudotuberculosis IP 32953 2953737 YP_070112.1 CDS YPTB1584 NC_006155.1 1912774 1913313 D similar to Yersinia pestis YPO1575 conserved hypothetical protein (100% evalue=3.E-88); Salmonella typhimurium STM4192 cytoplasmic protein (87.1% evalue=1.E-82); hypothetical protein 1912774..1913313 Yersinia pseudotuberculosis IP 32953 2953738 YP_070113.1 CDS YPTB1585 NC_006155.1 1914026 1915048 D similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 1914026..1915048 Yersinia pseudotuberculosis IP 32953 2953739 YP_070114.1 CDS YPTB1586 NC_006155.1 1915048 1915827 D similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 1915048..1915827 Yersinia pseudotuberculosis IP 32953 2953740 YP_070115.1 CDS YPTB1587 NC_006155.1 1916227 1916436 R hypothetical protein complement(1916227..1916436) Yersinia pseudotuberculosis IP 32953 2953741 YP_070116.1 CDS YPTB1588 NC_006155.1 1916426 1916926 R similar to Yersinia pestis YPO1902 hypothetical protein (100% evalue=5.E-93); Salmonella typhi STY4526 hypothetical protein (34.6% evalue=9.E-24); hypothetical protein complement(1916426..1916926) Yersinia pseudotuberculosis IP 32953 2953742 YP_070117.1 CDS YPTB1589 NC_006155.1 1916992 1917177 R similar to Yersinia pestis YPO1903 hypothetical protein (100% evalue=5.E-25); hypothetical protein complement(1916992..1917177) Yersinia pseudotuberculosis IP 32953 2953743 YP_070118.1 CDS YPTB1590 NC_006155.1 1917521 1918447 R similar to Yersinia pestis YPO1905a hypothetical protein (100% evalue=1.E-62); hypothetical protein complement(1917521..1918447) Yersinia pseudotuberculosis IP 32953 2953744 YP_070119.1 CDS fyuA NC_006155.1 1919320 1921341 R similar to Yersinia pestis YPO1906 fyuA, psn; pesticin/yersiniabactin receptor protein (99.8% evalue=0); Ralstonia solanacearum RS04230 siderophore receptor protein (32.2% evalue=7.E-83); OMR family pesticin/yersiniabactin receptor protein complement(1919320..1921341) Yersinia pseudotuberculosis IP 32953 2955668 YP_070120.1 CDS ybtE NC_006155.1 1921472 1923049 R similar to Yersinia pestis YPO1907 ybtE, irp5; yersiniabactin siderophore biosynthetic protein (100% evalue=0); Bacillus subtilis BG11020 dhbE, entE; 2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E) (50.5% evalue=1.E-135); yersiniabactin siderophore biosynthetic protein complement(1921472..1923049) Yersinia pseudotuberculosis IP 32953 2956970 YP_070121.1 CDS ybtT NC_006155.1 1923053 1923841 R similar to Yersinia pestis YPO1908 ybtT, irp4; yersiniabactin biosynthetic protein YbtT (100% evalue=1.E-155); Bacillus subtilis BG10171 srfAD, comL, srfA4; surfactin synthetase subunit 4 (31.7% evalue=6.E-26); yersiniabactin biosynthetic protein YbtT complement(1923053..1923841) Yersinia pseudotuberculosis IP 32953 2956974 YP_070122.1 CDS ybtU NC_006155.1 1923853 1924953 R similar to Yersinia pestis YPO1909 ybtU, irp3; yersiniabactin biosynthetic protein YbtU (100% evalue=0); Ralstonia solanacearum RS04226 siderophore-like synthase (38.2% evalue=4.E-54); yersiniabactin biosynthetic protein YbtU complement(1923853..1924953) Yersinia pseudotuberculosis IP 32953 2956975 YP_070123.1 CDS irp1 NC_006155.1 1924950 1934441 R similar to Yersinia pestis YPO1910 irp1; yersiniabactin biosynthetic protein (99.9% evalue=0); Mesorhizobium loti mlr9053 polyketide synthase (38.7% evalue=1.E-167); yersiniabactin biosynthetic protein complement(1924950..1934441) Yersinia pseudotuberculosis IP 32953 2955895 YP_070124.1 CDS irp2 NC_006155.1 1934529 1940636 R similar to Yersinia pestis YPO1911 irp2; yersiniabactin biosynthetic protein (100% evalue=0); yersiniabactin biosynthetic protein complement(1934529..1940636) Yersinia pseudotuberculosis IP 32953 2955896 YP_070125.1 CDS ybtA NC_006155.1 1940827 1941786 R similar to Yersinia pestis YPO1912 ybtA; transcriptional regulator YbtA (100% evalue=0); Anabaena all2621 transcriptional regulator (34.3% evalue=2.E-18); transcriptional regulator YbtA complement(1940827..1941786) Yersinia pseudotuberculosis IP 32953 2956969 YP_070126.1 CDS ybtP NC_006155.1 1941953 1943755 D similar to Yersinia pestis YPO1913 ybtP, irp6; lipoprotein inner membrane ABC-transporter (99.6% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (39% evalue=1.E-102); lipoprotein inner membrane ABC-transporter 1941953..1943755 Yersinia pseudotuberculosis IP 32953 2956971 YP_070127.1 CDS ybtQ NC_006155.1 1943742 1945544 D similar to Yersinia pestis YPO1914 ybtQ, irp7; inner membrane ABC-transporter YbtQ (100% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (34.3% evalue=2.E-81); ABC transporter permease 1943742..1945544 Yersinia pseudotuberculosis IP 32953 2956972 YP_070128.1 CDS ybtX NC_006155.1 1945537 1946817 D MFS superfamily transporter signal transducer 1945537..1946817 Yersinia pseudotuberculosis IP 32953 2956976 YP_070129.1 CDS ybtS NC_006155.1 1946845 1948149 D catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin; salicylate synthase Irp9 1946845..1948149 Yersinia pseudotuberculosis IP 32953 2956973 YP_070130.1 CDS YPTB1603 NC_006155.1 1950283 1950912 R similar to Yersinia pestis YPO1576 GerR-family transcriptional regulatory protein (100% evalue=1.E-114); Escherichia coli ECs0418 transcription regulator (70.8% evalue=7.E-79); GerR family transcriptional regulator complement(1950283..1950912) Yersinia pseudotuberculosis IP 32953 2953746 YP_070131.1 CDS YPTB1604 NC_006155.1 1951170 1952462 R similar to Yersinia pestis YPO1577 C4-dicarboxylate transporter, large subunit (100% evalue=0); Agrobacterium tumefaciens AGR_L_3348 hypothetical 46.1 KD protein in PlsC 3'region (48.2% evalue=1.E-115); TRAP dicarboxylate transporter subunit DctM complement(1951170..1952462) Yersinia pseudotuberculosis IP 32953 2953747 YP_070132.1 CDS YPTB1605 NC_006155.1 1952482 1952988 R similar to Yersinia pestis YPO1578 C4-dicarboxylate transporter, small subunit (100% evalue=7.E-91); Sinorhizobium meliloti SMb21352 dctQ; C4-dicarboxylate small membrane transport protein (26.8% evalue=1.E-13); TRAP dicarboxylate family transporter subunit DctQ complement(1952482..1952988) Yersinia pseudotuberculosis IP 32953 2953748 YP_070133.1 CDS YPTB1606 NC_006155.1 1953112 1954104 R similar to Yersinia pestis YPO1579 C4-dicarboxylate transporter, periplasmic protein (99% evalue=0); Agrobacterium tumefaciens Atu3137 C4-dicarboxylate-binding protein (39% evalue=1.E-57); TRAP dicarboxylate family transporter subunit DctP complement(1953112..1954104) Yersinia pseudotuberculosis IP 32953 2953749 YP_070134.1 CDS YPTB1607 NC_006155.1 1954627 1955367 D similar to Yersinia pestis YPO1580 phosphopantetheinyl transferase (99.1% evalue=1.E-139); Pseudomonas aeruginosa PA1165 hypothetical protein (36.9% evalue=4.E-23); phosphopantetheinyl transferase 1954627..1955367 Yersinia pseudotuberculosis IP 32953 2953750 YP_070135.1 CDS rafA NC_006155.1 1955793 1957919 R similar to Yersinia pestis YPO1581 rafA; alpha-galactosidase (99.8% evalue=0); C. perfringens CPE0512 agaN; alpha-galactosidase (33.9% evalue=2.E-86); alpha-galactosidase complement(1955793..1957919) Yersinia pseudotuberculosis IP 32953 2956399 YP_070136.1 CDS lacY NC_006155.1 1957997 1959304 R lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease complement(1957997..1959304) Yersinia pseudotuberculosis IP 32953 2955930 YP_070137.1 CDS thuR NC_006155.1 1959659 1960675 D similar to Sinorhizobium meliloti SMb20324 thuR; ThuR, regulatory protein for trehalosemaltose transport system (34.2% evalue=3.E-41); Brucella melitensis BMEII0946 laci-family transcription regulator (35.1% evalue=5.E-45); regulatory protein ThuR 1959659..1960675 Yersinia pseudotuberculosis IP 32953 2956704 YP_070138.1 CDS YPTB1611 NC_006155.1 1961081 1961893 R similar to Yersinia pestis YPO1732 conserved hypothetical protein (100% evalue=1.E-160); Escherichia coli Z3132 hypothetical protein (66% evalue=3.E-97); hypothetical protein complement(1961081..1961893) Yersinia pseudotuberculosis IP 32953 2953751 YP_070139.1 CDS YPTB1612 NC_006155.1 1962283 1962567 R similar to Yersinia pestis YPO1733 conserved hypothetical protein (100% evalue=3.E-47); Mesorhizobium loti mlr3009 hypothetical protein (48.9% evalue=1.E-17); hypothetical protein complement(1962283..1962567) Yersinia pseudotuberculosis IP 32953 2953752 YP_070140.1 CDS YPTB1613 NC_006155.1 1962804 1963655 R similar to Yersinia pestis YPO1734 conserved hypothetical protein (100% evalue=1.E-160); Pseudomonas aeruginosa PA4780 conserved hypothetical protein (67.7% evalue=1.E-105); hypothetical protein complement(1962804..1963655) Yersinia pseudotuberculosis IP 32953 2953753 YP_070141.1 CDS YPTB1614 NC_006155.1 1963758 1965476 R similar to Yersinia pestis YPO1735 ABC transporter (ATP-binding protein) (100% evalue=0); Agrobacterium tumefaciens Atu1738 ABC transporter, nucleotide binding/ATPase (68% evalue=0); ABC transporter ATP-binding protein complement(1963758..1965476) Yersinia pseudotuberculosis IP 32953 2953754 YP_070142.1 CDS YPTB1615 NC_006155.1 1966378 1966764 R similar to Yersinia pestis YPO1737 AraC-family transcriptional regulatory protein (99.2% evalue=4.E-70); AraC family transcriptional regulator complement(1966378..1966764) Yersinia pseudotuberculosis IP 32953 2953755 YP_070143.1 CDS YPTB1616 NC_006155.1 1967319 1967558 D similar to Yersinia pestis YPO1738 conserved hypothetical protein (98.7% evalue=3.E-37); Escherichia coli JW1891 yecJ; Hypothetical protein (77.9% evalue=1.E-27); hypothetical protein 1967319..1967558 Yersinia pseudotuberculosis IP 32953 2953756 YP_070144.1 CDS YPTB1617 NC_006155.1 1967649 1967882 R similar to Yersinia pestis YPO1739 membrane protein (98.6% evalue=9.E-35); Salmonella typhi STY1971 exported protein (54.7% evalue=3.E-18); hypothetical protein complement(1967649..1967882) Yersinia pseudotuberculosis IP 32953 2953757 YP_070145.1 CDS YPTB1618 NC_006155.1 1968465 1968749 D similar to Yersinia pestis YPO1740 exported protein (95.7% evalue=9.E-43); Escherichia coli JW1814 hypothetical protein (50% evalue=1.E-09); hypothetical protein 1968465..1968749 Yersinia pseudotuberculosis IP 32953 2953758 YP_070146.1 CDS YPTB1619 NC_006155.1 1969012 1969311 D similar to Yersinia pestis YPO1741 hypothetical protein (100% evalue=5.E-57); hypothetical protein 1969012..1969311 Yersinia pseudotuberculosis IP 32953 2953759 YP_070147.1 CDS YPTB1620 NC_006155.1 1969354 1969665 D similar to Yersinia pestis YPO1742 hypothetical protein (99% evalue=3.E-52); hypothetical protein 1969354..1969665 Yersinia pseudotuberculosis IP 32953 2953760 YP_070148.1 CDS aroP NC_006155.1 1969902 1971275 D similar to Yersinia pestis YPO3421 aroP; aromatic amino acid transport protein (77.7% evalue=0); amino acid APC transporter 1969902..1971275 Yersinia pseudotuberculosis IP 32953 2955231 YP_070149.1 CDS pagP NC_006155.1 1971571 1972179 R catalyzes the transfer of palmitate to lipid A; palmitoyl transferase complement(1971571..1972179) Yersinia pseudotuberculosis IP 32953 2953761 YP_070150.1 CDS YPTB1623 NC_006155.1 1973181 1973297 D similar to Yersinia pestis YPO1745 conserved hypothetical protein (100% evalue=2.E-14); Salmonella typhi STY1968 conserved hypothetical protein (84.2% evalue=1.E-10); hypothetical protein 1973181..1973297 Yersinia pseudotuberculosis IP 32953 2953762 YP_070151.1 CDS cspC NC_006155.1 1973340 1973549 D similar to Yersinia pestis YPO1746 cspC, msmB; cold shock protein (100% evalue=2.E-34); Escherichia coli b1823 cspC, msmB; cold shock-like protein cspC (98.5% evalue=5.E-34); cold shock-like protein CspC 1973340..1973549 Yersinia pseudotuberculosis IP 32953 2955370 YP_070152.1 CDS YPTB1625 NC_006155.1 1973640 1974395 R similar to Yersinia pestis YPO1747 conserved hypothetical protein (100% evalue=1.E-145); Vibrio cholerae VC0710 conserved hypothetical protein (32.1% evalue=3.E-19); hypothetical protein complement(1973640..1974395) Yersinia pseudotuberculosis IP 32953 2953763 YP_070153.1 CDS rrmA NC_006155.1 1974795 1975634 D methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase 1974795..1975634 Yersinia pseudotuberculosis IP 32953 2956549 YP_070154.1 CDS YPTB1627 NC_006155.1 1975856 1976134 R similar to Yersinia pestis YPO2096 hypothetical phage protein (42.5% evalue=3.E-09); hypothetical protein complement(1975856..1976134) Yersinia pseudotuberculosis IP 32953 2953764 YP_070155.1 CDS YPTB1628 NC_006155.1 1976356 1978437 R similar to Pseudomonas aeruginosa PA2177 probable sensor/response regulator hybrid (48.8% evalue=2.E-30); hypothetical protein complement(1976356..1978437) Yersinia pseudotuberculosis IP 32953 2953765 YP_070156.1 CDS fcuA NC_006155.1 1978796 1981087 D similar to Yersinia pestis YPO1753 fcuA; ferrichrome receptor protein (98.2% evalue=0); Caulobacter crescentus CC2928 TonB-dependent receptor (38.3% evalue=1.E-142); ferrichrome receptor protein 1978796..1981087 Yersinia pseudotuberculosis IP 32953 2955533 YP_070157.1 CDS yebN NC_006155.1 1981264 1981833 R similar to Yersinia pestis YPO1754 yebN; membrane protein (100% evalue=1.E-103); Salmonella typhimurium STM1834 yebN; YebN family transport protein (69.5% evalue=5.E-72); hypothetical protein complement(1981264..1981833) Yersinia pseudotuberculosis IP 32953 2956999 YP_070158.1 CDS yobD NC_006155.1 1982262 1982723 R similar to Yersinia pestis YPO1755 yobD; membrane protein (100% evalue=1.E-81); Salmonella typhi STY1962 membrane protein (61.1% evalue=1.E-49); hypothetical protein complement(1982262..1982723) Yersinia pseudotuberculosis IP 32953 2957101 YP_070159.1 CDS manZ NC_006155.1 1982923 1983810 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(1982923..1983810) Yersinia pseudotuberculosis IP 32953 2956000 YP_070160.1 CDS manY NC_006155.1 1983817 1984614 R similar to Yersinia pestis YPO1757 manY, ptsP, pel; PTS system, mannose-specific IIC component (100% evalue=1.E-142); Escherichia coli JW1807 manY; Phosphotransferase system enzyme II, mannose-specific, factor II-P (87.7% evalue=1.E-126); PTS system mannose-specific transporter subunit IIC complement(1983817..1984614) Yersinia pseudotuberculosis IP 32953 2955999 YP_070161.1 CDS manX NC_006155.1 1984706 1985680 R similar to Yersinia pestis YPO1758 manX, ptsL, gptB; PTS system, mannose-specific IIAB component (99.6% evalue=1.E-180); Escherichia coli JW1806 manX; PTS system, mannose-specific II component (81.4% evalue=1.E-145); PTS system mannose-specific transporter subunit IIAB complement(1984706..1985680) Yersinia pseudotuberculosis IP 32953 2955998 YP_070162.1 CDS yoaE NC_006155.1 1986391 1987935 D similar to Yersinia pestis YPO1759 yoaE; membrane protein (100% evalue=0); Salmonella typhi STY1958 membrane protein (73.5% evalue=0); CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps 1986391..1987935 Yersinia pseudotuberculosis IP 32953 2957100 YP_070163.1 CDS hpcR NC_006155.1 1988037 1988504 R similar to Yersinia pestis YPO1760 hpcR, hpaR; homoprotocatechuate degradative operon repressor (100% evalue=1.E-83); Salmonella typhimurium STM1100 hpaR; 4-hydroxyphenylacetate catabolism (70.5% evalue=7.E-52); homoprotocatechuate degradative operon repressor complement(1988037..1988504) Yersinia pseudotuberculosis IP 32953 2955832 YP_070164.1 CDS hpaG NC_006155.1 1988892 1989524 D similar to Salmonella typhi STY1134 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (65.5% evalue=1.E-74); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1988892..1989524 Yersinia pseudotuberculosis IP 32953 2955828 YP_070165.1 CDS YPTB1638 NC_006155.1 1989521 1990285 D similar to Salmonella typhimurium STM1101 hpaG; bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase (76.5% evalue=1.E-93); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1989521..1990285 Yersinia pseudotuberculosis IP 32953 2953766 YP_070166.1 CDS hpaE NC_006155.1 1990282 1991748 D similar to Yersinia pestis YPO1763 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (95% evalue=0); Salmonella typhimurium STM1102 hpaE; 4-hydroxyphenylacetate catabolism (84% evalue=0); 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 1990282..1991748 Yersinia pseudotuberculosis IP 32953 2955826 YP_070167.1 CDS hpaD NC_006155.1 1991867 1992724 D similar to Yersinia pestis YPO1764 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase (99.6% evalue=1.E-167); Salmonella typhi STY1137 hpcB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase (87.1% evalue=1.E-147); 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1991867..1992724 Yersinia pseudotuberculosis IP 32953 2955825 YP_070168.1 CDS hpaF NC_006155.1 1992749 1993147 D similar to Yersinia pestis YPO1765 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (100% evalue=2.E-72); Salmonella typhi STY1138 hpcD; 5-carboxymethyl-2-hydroxymuconate delta-isomerase (72.2% evalue=1.E-48); 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1992749..1993147 Yersinia pseudotuberculosis IP 32953 2955827 YP_070169.1 CDS hpaH NC_006155.1 1993141 1993944 D similar to Yersinia pestis YPO1766 hpaH, hpcG; 2-oxo-hept-3-ene-1,7-dioate hydratase (99.6% evalue=1.E-152); Salmonella typhi STY1139 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (79.4% evalue=1.E-121); 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1993141..1993944 Yersinia pseudotuberculosis IP 32953 2955829 YP_070170.1 CDS hpaI NC_006155.1 1993955 1994761 D similar to Yersinia pestis YPO1767 hpaI, pcH; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (99.6% evalue=1.E-151); Salmonella typhi STY1140 hpcH, hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (73.7% evalue=1.E-105); 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1993955..1994761 Yersinia pseudotuberculosis IP 32953 2955830 YP_070171.1 CDS hpaX NC_006155.1 1994787 1996154 D similar to Yersinia pestis YPO1768 hpaX; 4-hydroxyphenylacetate permease (100% evalue=0); Salmonella typhi STY1141 hpaX; 4-hydroxyphenylacetate permease (76% evalue=0); major facilitator superfamily 4-hydroxyphenylacetate symporter 1994787..1996154 Yersinia pseudotuberculosis IP 32953 2955831 YP_070172.1 CDS hpaB NC_006155.1 1996222 1997784 D similar to Yersinia pestis YPO1769 hpaB; 4-hydroxyphenylacetate 3-monooxygenase (100% evalue=0); Salmonella typhimurium STM1099 hpaB; 4-hydroxyphenylacetate catabolism (81.9% evalue=0); 4-hydroxyphenylacetate 3-monooxygenase 1996222..1997784 Yersinia pseudotuberculosis IP 32953 2955823 YP_070173.1 CDS hpaC NC_006155.1 1997805 1998302 D similar to Yersinia pestis YPO1770 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein (100% evalue=1.E-94); Salmonella typhi STY1130 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein (72.9% evalue=4.E-62); 4-hydroxyphenylacetate 3-monooxygenase coupling protein 1997805..1998302 Yersinia pseudotuberculosis IP 32953 2955824 YP_070174.1 CDS sdaA NC_006155.1 1998582 1999946 R similar to Yersinia pestis YPO1771 sdaA; L-serine dehydratase (99.5% evalue=0); Escherichia coli JW1803 sdaA; L-serine dehydratase 1 (l-serine deaminase 1) (sdh 1) (l-sd1). (84.3% evalue=0); L-serine dehydratase complement(1998582..1999946) Yersinia pseudotuberculosis IP 32953 2956575 YP_070175.1 CDS YPTB1648 NC_006155.1 2000654 2001253 R similar to Yersinia pestis YPO1772 MutT-family protein (99.4% evalue=1.E-111); Salmonella typhimurium STM1825 yeaB; NTP pyrophosphohydrolase (55.2% evalue=5.E-57); hypothetical protein complement(2000654..2001253) Yersinia pseudotuberculosis IP 32953 2953767 YP_070176.1 CDS pabB NC_006155.1 2001250 2002626 R catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I complement(2001250..2002626) Yersinia pseudotuberculosis IP 32953 2956204 YP_070177.1 CDS YPTB1650 NC_006155.1 2002791 2003048 D similar to Yersinia pestis YPO1774 conserved hypothetical protein (98.8% evalue=2.E-43); Salmonella typhimurium STM1823 yoaH; cytoplasmic protein (62.7% evalue=3.E-13); hypothetical protein 2002791..2003048 Yersinia pseudotuberculosis IP 32953 2953768 YP_070178.1 CDS purT NC_006155.1 2003174 2004355 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(2003174..2004355) Yersinia pseudotuberculosis IP 32953 2956378 YP_070179.1 CDS dbpA NC_006155.1 2004668 2006050 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 2004668..2006050 Yersinia pseudotuberculosis IP 32953 2955432 YP_070180.1 CDS YPTB1653 NC_006155.1 2006144 2006464 D similar to Yersinia pestis YPO1777 conserved hypothetical protein (100% evalue=1.E-53); Escherichia coli JW1837 yebG; Hypothetical protein (ORF96) (55.7% evalue=2.E-23); hypothetical protein 2006144..2006464 Yersinia pseudotuberculosis IP 32953 2953769 YP_070181.1 CDS YPTB1654 NC_006155.1 2006504 2006812 D similar to Yersinia pestis YPO1778 conserved hypothetical protein (100% evalue=8.E-54); Escherichia coli ECs3772 hypothetical protein (66.6% evalue=3.E-29); hypothetical protein 2006504..2006812 Yersinia pseudotuberculosis IP 32953 2953770 YP_070182.1 CDS YPTB1655 NC_006155.1 2006919 2007329 D secreted protein; unknown function; hypothetical protein 2006919..2007329 Yersinia pseudotuberculosis IP 32953 2953771 YP_070183.1 CDS ptrB NC_006155.1 2007639 2009690 D similar to Yersinia pestis YPO1780 ptrB, rlp; oligopeptidase B (100% evalue=0); Salmonella typhi STY2085 opdB; oligopeptidase (65% evalue=0); oligopeptidase B 2007639..2009690 Yersinia pseudotuberculosis IP 32953 2956359 YP_070184.1 CDS pip NC_006155.1 2010412 2011362 D similar to Yersinia pestis YPO1781 pip; proline iminopeptidase (99.6% evalue=0); Mesorhizobium loti mlr7803 prolyl aminopeptidase (63.3% evalue=1.E-121); proline iminopeptidase 2010412..2011362 Yersinia pseudotuberculosis IP 32953 2956273 YP_070185.1 CDS holE NC_006155.1 2011422 2011652 R similar to Yersinia pestis YPO1782 holE; DNA polymerase III, theta subunit (100% evalue=2.E-37); Salmonella typhimurium STM1876 holE; DNA polymerase III, theta subunit (64.4% evalue=1.E-20); DNA polymerase III subunit theta complement(2011422..2011652) Yersinia pseudotuberculosis IP 32953 2955822 YP_070186.1 CDS ftnA NC_006155.1 2012053 2012562 D similar to Yersinia pestis YPO1783 ftnA, ftn, rsgA, gen-165; ferritin (99.4% evalue=4.E-93); Vibrio cholerae VC0078 ferritin (68.4% evalue=8.E-65); ferritin 2012053..2012562 Yersinia pseudotuberculosis IP 32953 2955650 YP_070187.1 CDS YPTB1660 NC_006155.1 2012941 2013327 D similar to Yersinia pestis YPO1784 copper resistance protein (100% evalue=2.E-68); Salmonella typhimurium STM1875 yobA; homolog of Cu resistance protein CopC (51.7% evalue=3.E-28); copper resistance protein 2012941..2013327 Yersinia pseudotuberculosis IP 32953 2953772 YP_070188.1 CDS YPTB1661 NC_006155.1 2013330 2014214 D similar to Yersinia pestis YPO1785 copper resistance protein D (100% evalue=1.E-166); Escherichia coli ECs2550 resistance protein (40.5% evalue=9.E-53); copper resistance protein D 2013330..2014214 Yersinia pseudotuberculosis IP 32953 2953773 YP_070189.1 CDS yebY NC_006155.1 2014296 2014652 D similar to Yersinia pestis YPO1786 yebY; exported protein (99.1% evalue=2.E-61); Escherichia coli ECs2549 hypothetical protein (59.8% evalue=6.E-32); hypothetical protein 2014296..2014652 Yersinia pseudotuberculosis IP 32953 2957001 YP_070190.1 CDS YPTB1663 NC_006155.1 2015175 2015501 R similar to Yersinia pestis YPO1788 acyl carrier protein (100% evalue=3.E-59); Salmonella typhimurium STM2011 cytoplasmic protein (73.1% evalue=2.E-43); acyl carrier protein complement(2015175..2015501) Yersinia pseudotuberculosis IP 32953 2953774 YP_070191.1 CDS YPTB1664 NC_006155.1 2015495 2015953 R similar to Yersinia pestis YPO1789 membrane protein (100% evalue=1.E-83); Salmonella typhi STY2214 hypothetical protein (81.1% evalue=1.E-54); hypothetical protein complement(2015495..2015953) Yersinia pseudotuberculosis IP 32953 2953775 YP_070192.1 CDS flhB NC_006155.1 2016462 2017622 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Yersinia has 2 copies of flhB; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB 2016462..2017622 Yersinia pseudotuberculosis IP 32953 2955586 YP_070193.1 CDS flhA NC_006155.1 2017622 2019700 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2017622..2019700 Yersinia pseudotuberculosis IP 32953 2955584 YP_070194.1 CDS flhE NC_006155.1 2019700 2020122 D similar to Yersinia pestis YPO1792 flhE; flagellar protein FlhE precursor (99.2% evalue=5.E-74); Escherichia coli JW1867 flhE; FlhE protein (45.1% evalue=3.E-23); flagellar protein FlhE 2019700..2020122 Yersinia pseudotuberculosis IP 32953 2955590 YP_070195.1 CDS YPTB1668 NC_006155.1 2020732 2023689 D similar to Yersinia pestis YPO3944 invasin (38.7% evalue=1.E-136); invasin 2020732..2023689 Yersinia pseudotuberculosis IP 32953 2953776 YP_070196.1 CDS flgN NC_006155.1 2023869 2024309 R similar to Yersinia pestis YPO1796 flgN; flagella synthesis protein FlgN (99.3% evalue=1.E-77); Escherichia coli b1070 flgN; flagella synthesis protein flgN (44.2% evalue=5.E-22); flagellar synthesis protein FlgN complement(2023869..2024309) Yersinia pseudotuberculosis IP 32953 2955583 YP_070197.1 CDS flgM NC_006155.1 2024328 2024630 R regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM complement(2024328..2024630) Yersinia pseudotuberculosis IP 32953 2955582 YP_070198.1 CDS flgA NC_006155.1 2024781 2025479 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(2024781..2025479) Yersinia pseudotuberculosis IP 32953 2955558 YP_070199.1 CDS flgB NC_006155.1 2025718 2026131 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 2025718..2026131 Yersinia pseudotuberculosis IP 32953 2955560 YP_070200.1 CDS flgC NC_006155.1 2026137 2026541 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 2026137..2026541 Yersinia pseudotuberculosis IP 32953 2955562 YP_070201.1 CDS flgD NC_006155.1 2026556 2027242 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 2026556..2027242 Yersinia pseudotuberculosis IP 32953 2955564 YP_070202.1 CDS flgE NC_006155.1 2027444 2028730 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 2027444..2028730 Yersinia pseudotuberculosis IP 32953 2955566 YP_070203.1 CDS flgF NC_006155.1 2028752 2029507 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Yersinia contains two copies of this and other flagella genes; flagellar basal body rod protein FlgF 2028752..2029507 Yersinia pseudotuberculosis IP 32953 2955569 YP_070204.1 CDS flgG NC_006155.1 2029533 2030315 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 2029533..2030315 Yersinia pseudotuberculosis IP 32953 2955570 YP_070205.1 CDS flgH NC_006155.1 2030459 2031148 D part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 2030459..2031148 Yersinia pseudotuberculosis IP 32953 2955573 YP_070206.1 CDS flgI NC_006155.1 2031163 2032272 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 2031163..2032272 Yersinia pseudotuberculosis IP 32953 2955575 YP_070207.1 CDS flgJ NC_006155.1 2032272 2033216 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 2032272..2033216 Yersinia pseudotuberculosis IP 32953 2955577 YP_070208.1 CDS flgK NC_006155.1 2033944 2035608 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 2033944..2035608 Yersinia pseudotuberculosis IP 32953 2955579 YP_070209.2 CDS flgL NC_006155.1 2035714 2036727 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; flagellar hook-associated protein FlgL 2035714..2036727 Yersinia pseudotuberculosis IP 32953 2955581 YP_070210.1 CDS YPTB1683 NC_006155.1 2036756 2037733 R similar to Yersinia pestis YPO1810 transcriptional regulatory protein (99.6% evalue=0); Brucella melitensis BMEI0398 deoxyribonucleoside regulator / dihydroxyacetone kinase (41.5% evalue=6.E-67); transcriptional regulator complement(2036756..2037733) Yersinia pseudotuberculosis IP 32953 2953777 YP_070211.1 CDS YPTB1684 NC_006155.1 2037975 2040041 D similar to Yersinia pestis YPO1811 oxidoreductase (99.4% evalue=0); Mesorhizobium loti mll7289 probable oxidoreductase (48.6% evalue=0); short chain dehydrogenase 2037975..2040041 Yersinia pseudotuberculosis IP 32953 2953778 YP_070212.1 CDS YPTB1685 NC_006155.1 2040189 2041229 D similar to Yersinia pestis YPO1812 sugar transport system permease (97.7% evalue=0); Sinorhizobium meliloti SMb20315 sugar ABC transporter permease (59.7% evalue=1.E-104); sugar ABC transporter permease 2040189..2041229 Yersinia pseudotuberculosis IP 32953 2953779 YP_070213.1 CDS YPTB1686 NC_006155.1 2041272 2042267 D similar to Yersinia pestis YPO1813 sugar-binding periplasmic protein (100% evalue=0); Sinorhizobium meliloti SMb20316 ABC transporter periplasmic sugar-binding protein (61.1% evalue=1.E-116); sugar ABC transporter substrate-binding protein 2041272..2042267 Yersinia pseudotuberculosis IP 32953 2953780 YP_070214.1 CDS YPTB1687 NC_006155.1 2042333 2043910 D similar to Yersinia pestis YPO1814 sugar ABC transporter, ATP-binding protein (98.8% evalue=0); Sinorhizobium meliloti SMb20317 sugar ABC transporter ATP-binding protein (56.2% evalue=1.E-155); sugar ABC transporter ATP-binding protein 2042333..2043910 Yersinia pseudotuberculosis IP 32953 2953781 YP_070215.1 CDS YPTB1688 NC_006155.1 2043913 2044935 D similar to Yersinia pestis YPO1815 sugar ABC transporter, permease (99.6% evalue=1.E-170); Sinorhizobium meliloti SMb20318 sugar ABC transporter permease (64.9% evalue=1.E-113); sugar ABC transporter permease 2043913..2044935 Yersinia pseudotuberculosis IP 32953 2953782 YP_070216.1 CDS YPTB1689 NC_006155.1 2044984 2045943 D similar to Yersinia pestis YPO1816 sugar kinase (98.7% evalue=1.E-180); Escherichia coli JW1761 hypothetical protein (24.7% evalue=1.E-23); sugar kinase 2044984..2045943 Yersinia pseudotuberculosis IP 32953 2953783 YP_070217.1 CDS YPTB1690 NC_006155.1 2046009 2046608 R hypothetical protein complement(2046009..2046608) Yersinia pseudotuberculosis IP 32953 2953784 YP_070218.1 CDS fliR NC_006155.1 2047081 2047863 R FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR complement(2047081..2047863) Yersinia pseudotuberculosis IP 32953 2955619 YP_070219.1 CDS fliQ NC_006155.1 2047866 2048135 R with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ complement(2047866..2048135) Yersinia pseudotuberculosis IP 32953 2955618 YP_070220.2 CDS fliP NC_006155.1 2048241 2048981 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2048241..2048981) Yersinia pseudotuberculosis IP 32953 2955616 YP_070221.1 CDS fliO NC_006155.1 2049062 2049430 R similar to Yersinia pestis YPO1821 fliO, mopB; flagellar protein FliO (99.1% evalue=7.E-63); Salmonella typhimurium STM1978 fliO; flagellar biosynthesis (45.8% evalue=1.E-19); flagellar protein FliO complement(2049062..2049430) Yersinia pseudotuberculosis IP 32953 2955614 YP_070222.1 CDS fliN NC_006155.1 2049658 2050074 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN complement(2049658..2050074) Yersinia pseudotuberculosis IP 32953 2955612 YP_070223.1 CDS fliM NC_006155.1 2050071 2051072 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(2050071..2051072) Yersinia pseudotuberculosis IP 32953 2955611 YP_070224.1 CDS fliL NC_006155.1 2051078 2051548 R interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL complement(2051078..2051548) Yersinia pseudotuberculosis IP 32953 2955609 YP_070225.1 CDS fliK NC_006155.1 2051834 2053186 R similar to Yersinia pestis YPO1825 fliK; flagellar hook-length control protein FliK (99.3% evalue=0); Salmonella typhimurium STM1974 fliK; flagellar hook-length control protein (34.6% evalue=4.E-46); flagellar hook-length control protein FliK complement(2051834..2053186) Yersinia pseudotuberculosis IP 32953 2955608 YP_070226.1 CDS fliJ NC_006155.1 2053183 2053629 R rod/hook and filament chaperone; flagellar biosynthesis chaperone complement(2053183..2053629) Yersinia pseudotuberculosis IP 32953 2955607 YP_070227.1 CDS fliI NC_006155.1 2053705 2055105 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(2053705..2055105) Yersinia pseudotuberculosis IP 32953 2955606 YP_070228.1 CDS fliH NC_006155.1 2055105 2055821 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(2055105..2055821) Yersinia pseudotuberculosis IP 32953 2955604 YP_070229.1 CDS fliG NC_006155.1 2055814 2056806 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2055814..2056806) Yersinia pseudotuberculosis IP 32953 2955602 YP_070230.1 CDS fliF NC_006155.1 2056803 2058515 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2056803..2058515) Yersinia pseudotuberculosis IP 32953 2955600 YP_070231.1 CDS fliE NC_006155.1 2058868 2059179 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 2058868..2059179 Yersinia pseudotuberculosis IP 32953 2955598 YP_070232.1 CDS YPTB1705 NC_006155.1 2059345 2059512 D similar to Yersinia pestis YPO2123 phage minor tail protein (83.6% evalue=7.E-23); phage minor tail protein 2059345..2059512 Yersinia pseudotuberculosis IP 32953 2953785 YP_070233.1 CDS YPTB1706 NC_006155.1 2059537 2059842 D similar to Yersinia pestis YPO1832 hypothetical protein (99% evalue=2.E-53); Salmonella typhi STY1030 bacteriophage protein (70% evalue=3.E-18); hypothetical protein 2059537..2059842 Yersinia pseudotuberculosis IP 32953 2953786 YP_070234.1 CDS YPTB1708 NC_006155.1 2060514 2061125 R similar to Yersinia pestis YPO1834 DNA-3-methyladenine glycosidase (99.5% evalue=1.E-110); M. pulmonis MYPU_0950 ogt; methylated-DNA--protein-cysteine methyltransferase (39.5% evalue=3.E-38); DNA-3-methyladenine glycosidase complement(2060514..2061125) Yersinia pseudotuberculosis IP 32953 2953788 YP_070235.1 CDS YPTB1709 NC_006155.1 2061286 2064240 R similar to Vibrio cholerae VCA0895 chemotactic transducer-related protein (35.8% evalue=1.E-153); Sinorhizobium meliloti SMc00339 cyaA; adenylate cyclase 1 protein (22.3% evalue=4.E-12); chemotactic transducer-related protein complement(2061286..2064240) Yersinia pseudotuberculosis IP 32953 2953789 YP_070236.1 CDS YPTB1710 NC_006155.1 2064594 2065469 R similar to Yersinia pestis YPO1837 AraC-family transcriptional regulatory protein (100% evalue=1.E-166); Salmonella typhimurium STM1082 bacterial regulatory protein, AraC family (28% evalue=1.E-19); AraC family transcriptional regulator complement(2064594..2065469) Yersinia pseudotuberculosis IP 32953 2953790 YP_070237.1 CDS fliT NC_006155.1 2065770 2066132 R binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT complement(2065770..2066132) Yersinia pseudotuberculosis IP 32953 2955623 YP_070238.1 CDS fliS NC_006155.1 2066143 2066541 R flagellin specific chaperone; flagellar protein FliS complement(2066143..2066541) Yersinia pseudotuberculosis IP 32953 2955621 YP_070239.1 CDS fliD NC_006155.1 2066552 2067952 R involved in flagellin assembly; flagellar capping protein complement(2066552..2067952) Yersinia pseudotuberculosis IP 32953 2955596 YP_070240.1 CDS fliC NC_006155.1 2068249 2069358 D structural flagella protein; flagellin 2068249..2069358 Yersinia pseudotuberculosis IP 32953 2955594 YP_070241.1 CDS fliA NC_006155.1 2069705 2070427 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 2069705..2070427 Yersinia pseudotuberculosis IP 32953 2955591 YP_070242.1 CDS fliZ NC_006155.1 2070662 2071171 D expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 2070662..2071171 Yersinia pseudotuberculosis IP 32953 2955625 YP_070243.1 CDS YedO NC_006155.1 2071460 2072452 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2071460..2072452 Yersinia pseudotuberculosis IP 32953 2957004 YP_070244.1 CDS fliY NC_006155.1 2072576 2073376 D similar to Yersinia pestis YPO1846 fliY; cystine-binding periplasmic protein (100% evalue=1.E-147); Escherichia coli b1920 fliY; polar amino acid transport system substrate-binding protein (74% evalue=1.E-112); cystine transporter subunit 2072576..2073376 Yersinia pseudotuberculosis IP 32953 2955624 YP_070245.1 CDS yecS NC_006155.1 2073376 2074038 D similar to Yersinia pestis YPO1847 yecS; amino-acid ABC transporter (permease) (99% evalue=1.E-119); Escherichia coli Z3006 yecS; transport system permease (former yecC) (80.9% evalue=2.E-97); amino-acid ABC transporter permease 2073376..2074038 Yersinia pseudotuberculosis IP 32953 2957003 YP_070246.1 CDS yecC NC_006155.1 2074041 2074802 D similar to Yersinia pestis YPO1848 yecC; amino-acid ABC transporter (ATP-binding protein) (100% evalue=1.E-140); Salmonella typhimurium STM1951 yecC; ABC-type polar amino acid transport system, ATPase component (77.8% evalue=1.E-103); amino-acid ABC transporter ATP-binding protein YecC 2074041..2074802 Yersinia pseudotuberculosis IP 32953 2957002 YP_070247.1 CDS YPTB1721 NC_006155.1 2075094 2075465 R similar to Yersinia pestis YPO1849 conserved hypothetical protein (100% evalue=3.E-55); hypothetical protein complement(2075094..2075465) Yersinia pseudotuberculosis IP 32953 2953791 YP_070248.1 CDS YPTB1722 NC_006155.1 2075465 2075800 R similar to Yersinia pestis YPO1850 hypothetical protein (99% evalue=4.E-62); hypothetical protein complement(2075465..2075800) Yersinia pseudotuberculosis IP 32953 2953792 YP_070249.1 CDS putA NC_006155.1 2076296 2080267 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(2076296..2080267) Yersinia pseudotuberculosis IP 32953 2956380 YP_070250.1 CDS putP NC_006155.1 2080839 2082323 D similar to Yersinia pestis YPO1853 putP; proline permease (100% evalue=0); Salmonella typhimurium STM1125 putP; SSS family, major sodium/proline symporter (81.2% evalue=0); SSS family proline symporter 2080839..2082323 Yersinia pseudotuberculosis IP 32953 2956381 YP_070251.1 CDS YPTB1725 NC_006155.1 2082647 2083504 D similar to Yersinia pestis YPO1854 membrane protein (100% evalue=1.E-157); Escherichia coli ECs1263 cytochrome (76% evalue=1.E-121); oxidase dependent Fe+2 transporter 2082647..2083504 Yersinia pseudotuberculosis IP 32953 2953793 YP_070252.1 CDS YPTB1726 NC_006155.1 2083534 2084658 D similar to Yersinia pestis YPO1855 exported protein (98.9% evalue=0); Escherichia coli ECs1264 hypothetical protein (74.9% evalue=1.E-156); hypothetical protein 2083534..2084658 Yersinia pseudotuberculosis IP 32953 2953794 YP_070253.1 CDS YPTB1727 NC_006155.1 2084669 2085973 D similar to Yersinia pestis YPO1856 conserved hypothetical protein (99.7% evalue=0); Escherichia coli b1019 ycdB; hypothetical 46.8 kD protein in putP-phoH intergenic region precursor (ORF1) (72.1% evalue=1.E-174); hypothetical protein 2084669..2085973 Yersinia pseudotuberculosis IP 32953 2953795 YP_070254.1 CDS wrbA NC_006155.1 2086059 2086658 R stationary phase that binds TrpR repressor; TrpR binding protein WrbA complement(2086059..2086658) Yersinia pseudotuberculosis IP 32953 2956899 YP_070255.1 CDS YPTB1729 NC_006155.1 2087052 2088230 D similar to Yersinia pestis YPO1858 exported protein (100% evalue=0); H. influenzae HI0148 hypothetical protein HI0148 (46.4% evalue=3.E-96); N-acetylneuraminic acid mutarotase 2087052..2088230 Yersinia pseudotuberculosis IP 32953 2953796 YP_070256.1 CDS cycA NC_006155.1 2088356 2089780 R involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease complement(2088356..2089780) Yersinia pseudotuberculosis IP 32953 2955388 YP_070257.1 CDS ail NC_006155.1 2090895 2091446 D similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (45.3% evalue=5.E-38); attachment invasion locus protein 2090895..2091446 Yersinia pseudotuberculosis IP 32953 2955181 YP_070258.1 CDS YPTB1732 NC_006155.1 2091786 2092040 D similar to Yersinia pestis YPO1862 membrane protein (100% evalue=6.E-41); hypothetical protein 2091786..2092040 Yersinia pseudotuberculosis IP 32953 2953797 YP_070259.1 CDS ydgC NC_006155.1 2092068 2092412 R similar to Yersinia pestis YPO1863 ydgC, glpM; membrane protein (100% evalue=3.E-60); Salmonella typhimurium STM1476 ydgC; inner membrane protein (61.2% evalue=1.E-36); hypothetical protein complement(2092068..2092412) Yersinia pseudotuberculosis IP 32953 2956994 YP_070260.1 CDS YPTB1734 NC_006155.1 2092537 2092761 R similar to Yersinia pestis YPO1864 conserved hypothetical protein (100% evalue=9.E-35); Escherichia coli b1915 yecF; hypothetical 8.2 kD protein in uvrY-sdiA intergenic region (60.8% evalue=5.E-19); hypothetical protein complement(2092537..2092761) Yersinia pseudotuberculosis IP 32953 2953798 YP_070261.1 CDS uvrY NC_006155.1 2093424 2094080 D in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2093424..2094080 Yersinia pseudotuberculosis IP 32953 2956885 YP_070262.2 CDS uvrC NC_006155.1 2094052 2095905 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2094052..2095905 Yersinia pseudotuberculosis IP 32953 2956883 YP_070263.1 CDS pgsA NC_006155.1 2095964 2096512 D similar to Yersinia pestis YPO1867 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (100% evalue=1.E-103); Salmonella typhimurium STM1945 pgsA; phosphatidylglycerophosphate synthetase (76.7% evalue=1.E-78); phosphatidylglycerophosphate synthetase 2095964..2096512 Yersinia pseudotuberculosis IP 32953 2956246 YP_070264.1 CDS ogrK NC_006155.1 2097207 2097422 R in E. coli K-12 this is in prophage P2 remnant; DNA-binding transcriptional regulator complement(2097207..2097422) Yersinia pseudotuberculosis IP 32953 2956185 YP_070265.1 CDS YPTB1739 NC_006155.1 2097514 2098680 R similar to Salmonella typhi STY3702 regulator of late gene expression (52.9% evalue=1.E-107); Salmonella typhi STY2882 bacteriophage late gene regulator (52.9% evalue=1.E-107); D protein bacteriophage 186 and P2 complement(2097514..2098680) Yersinia pseudotuberculosis IP 32953 2953799 YP_070266.1 CDS YPTB1740 NC_006155.1 2098677 2099162 R similar to Salmonella typhi STY4602 phage tail protein (61% evalue=8.E-48); Salmonella typhi STY3701 phage tail protein (59% evalue=2.E-47); phage tail protein complement(2098677..2099162) Yersinia pseudotuberculosis IP 32953 2953800 YP_070267.1 CDS YPTB1741 NC_006155.1 2099162 2101588 R similar to Salmonella typhimurium STM2697 Fels-2 prophage:similar to orfG protein in phage 186 (34.2% evalue=1.E-100); Escherichia coli ECs2641 tail protein (35.5% evalue=1.E-101); bacteriophage P2 tail protein gpT complement(2099162..2101588) Yersinia pseudotuberculosis IP 32953 2953801 YP_070268.1 CDS YPTB1742 NC_006155.1 2101581 2101703 R similar to Salmonella typhi STY3699 hypothetical protein (66.6% evalue=4.E-07); Salmonella typhi STY2885 bacteriophage protein (66.6% evalue=4.E-07); phage protein complement(2101581..2101703) Yersinia pseudotuberculosis IP 32953 2953802 YP_070269.1 CDS YPTB1743 NC_006155.1 2101736 2102047 R similar to Salmonella typhi STY4605 phage tail protein (46.5% evalue=1.E-15); Ralstonia solanacearum RS03484 probable phage-related protein (50% evalue=1.E-15); tail protein gpE P2 bacteriophage complement(2101736..2102047) Yersinia pseudotuberculosis IP 32953 2953803 YP_070270.1 CDS YPTB1744 NC_006155.1 2102098 2102613 R similar to Salmonella typhi STY2887 probable major tail tube protein (59.4% evalue=1.E-54); Salmonella typhimurium STM2700 Fels-2 prophage: similar to genes in P2-like phages (60% evalue=4.E-55); tail tube protein FII (bacteriophage P2) complement(2102098..2102613) Yersinia pseudotuberculosis IP 32953 2953804 YP_070271.1 CDS YPTB1745 NC_006155.1 2102627 2103796 R similar to Salmonella typhi STY3696 probable major tail sheath protein (69.7% evalue=1.E-158); Salmonella typhi STY2888 bacteriophage major tail sheath protein (69.7% evalue=1.E-158); tail sheath protein (P2 and 186 bacteriophage) complement(2102627..2103796) Yersinia pseudotuberculosis IP 32953 2953805 YP_070272.1 CDS YPTB1746 NC_006155.1 2103924 2104406 R similar to Salmonella typhi STY3693 conserved hypothetical protein (39.1% evalue=2.E-08); Escherichia coli b2354 hypothetical protein (34.8% evalue=4.E-08); hypothetical protein complement(2103924..2104406) Yersinia pseudotuberculosis IP 32953 2953806 YP_070273.1 CDS YPTB1747 NC_006155.1 2104418 2105857 R similar to Salmonella typhi STY4611 probable phage tail fibre protein (71.6% evalue=9.E-71); Salmonella typhi STY3691 probable variable tail fibre protein (70.5% evalue=7.E-70); hypothetical protein complement(2104418..2105857) Yersinia pseudotuberculosis IP 32953 2953807 YP_070274.1 CDS YPTB1748 NC_006155.1 2105854 2106462 R similar to Salmonella typhi STY4612 phage tail protein (62.6% evalue=9.E-73); Salmonella typhi STY3690 phage tail protein (62.6% evalue=9.E-73); bacteriophage protein complement(2105854..2106462) Yersinia pseudotuberculosis IP 32953 2953808 YP_070275.1 CDS YPTB1749 NC_006155.1 2106455 2107363 R similar to Salmonella typhi STY3689 phage baseplate assembly protein (64.5% evalue=1.E-109); Salmonella typhimurium STM2708 Fels-2 prophage: similar to tail fiber protein (gpI) in phage P2 (64.2% evalue=1.E-108); bacteriophage protein complement(2106455..2107363) Yersinia pseudotuberculosis IP 32953 2953809 YP_070276.1 CDS YPTB1750 NC_006155.1 2107368 2107718 R similar to Salmonella typhi STY4614 phage baseplate assembly protein (63.8% evalue=3.E-33); Salmonella typhimurium STM2709 Fels-2 prophage: similar to gpJ, base plate of tail, in phage P2 (62.9% evalue=1.E-32); hypothetical protein complement(2107368..2107718) Yersinia pseudotuberculosis IP 32953 2953810 YP_070277.1 CDS YPTB1751 NC_006155.1 2107715 2108356 R similar to Salmonella typhi STY4615 phage baseplate assembly protein (46.6% evalue=6.E-46); Salmonella typhi STY3687 phage baseplate assembly protein (44.6% evalue=4.E-46); phage-related baseplate assembly protein complement(2107715..2108356) Yersinia pseudotuberculosis IP 32953 2953811 YP_070278.1 CDS YPTB1752 NC_006155.1 2108430 2108879 R similar to Salmonella typhi STY3686 phage tail protein (43.9% evalue=2.E-28); Salmonella typhimurium STM2711 Fels-2 prophage: similar to gpS for completion of tail, in phage P2 (44.8% evalue=2.E-28); prophage tail completion protein complement(2108430..2108879) Yersinia pseudotuberculosis IP 32953 2953812 YP_070279.1 CDS YPTB1753 NC_006155.1 2108876 2109331 R similar to Salmonella typhi STY3685 phage tail protein (41.9% evalue=3.E-24); Ralstonia solanacearum RS03499 probable tail completion-like protein (49.6% evalue=5.E-31); phage tail completion protein GpR complement(2108876..2109331) Yersinia pseudotuberculosis IP 32953 2953813 YP_070280.1 CDS YPTB1754 NC_006155.1 2109427 2109843 R similar to Salmonella typhi STY4618 regulatory protein (32.8% evalue=5.E-15); Salmonella typhimurium STM2714 Fels-2 prophage: similar to lysis protein (lysB) in phage P2 (34% evalue=2.E-14); hypothetical protein complement(2109427..2109843) Yersinia pseudotuberculosis IP 32953 2953814 YP_070281.1 CDS YPTB1755 NC_006155.1 2109845 2110351 R similar to Salmonella typhi STY4620 nucD2; lysozyme (61.5% evalue=4.E-50); Salmonella typhimurium STM2715 Fels-2 prophage: probable prophage lysozyme (62.4% evalue=7.E-54); phage lysozyme complement(2109845..2110351) Yersinia pseudotuberculosis IP 32953 2953815 YP_070282.1 CDS YPTB1756 NC_006155.1 2110335 2110556 R similar to Salmonella typhi STY3681 nucE; possible secretory protein (33.8% evalue=1.E-07); prophage Hp1 family holin complement(2110335..2110556) Yersinia pseudotuberculosis IP 32953 2953816 YP_070283.1 CDS YPTB1757 NC_006155.1 2110547 2110750 R similar to Salmonella typhi STY4622 phage tail protein (64.1% evalue=1.E-19); Salmonella typhimurium STM2717 Fels-2 prophage: similar to gpX in phage P2 (64.1% evalue=2.E-19); phage-related tail protein complement(2110547..2110750) Yersinia pseudotuberculosis IP 32953 2953817 YP_070284.1 CDS YPTB1758 NC_006155.1 2110750 2111223 R similar to Salmonella typhi STY3679 capsid completion protein (44.6% evalue=4.E-29); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (44% evalue=1.E-28); phage head completion protein GpL complement(2110750..2111223) Yersinia pseudotuberculosis IP 32953 2953818 YP_070285.1 CDS YPTB1759 NC_006155.1 2111323 2111982 R similar to Salmonella typhi STY4624 phage terminase (48.8% evalue=3.E-48); Ralstonia solanacearum RS03505 probable bacteriophage protein (52.4% evalue=1.E-57); prophage small terminase subunit complement(2111323..2111982) Yersinia pseudotuberculosis IP 32953 2953819 YP_070286.1 CDS YPTB1760 NC_006155.1 2111986 2113224 R Bacteriophage PhiD266; similar to Salmonella typhi STY4625 major capsid protein (58.4% evalue=1.E-113); Salmonella typhimurium STM2720 Fels-2 prophage: similar to gpN, major capsid, in phage P2 (56.9% evalue=1.E-113); major capsid protein complement(2111986..2113224) Yersinia pseudotuberculosis IP 32953 2953820 YP_070287.1 CDS YPTB1761 NC_006155.1 2113301 2114155 R similar to Salmonella typhi STY3676 capsid scaffolding protein (50.8% evalue=2.E-68); Salmonella typhimurium STM2721 Fels-2 prophage: similar to gpO, capsid scaffold, in phage P2 (50.8% evalue=3.E-67); V protein bacteriophage 186 complement(2113301..2114155) Yersinia pseudotuberculosis IP 32953 2953821 YP_070288.1 CDS YPTB1762 NC_006155.1 2114304 2116076 D similar to Salmonella typhi STY4627 probable terminase subunit (68.6% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (68.6% evalue=0); phage terminase subunit GpP 2114304..2116076 Yersinia pseudotuberculosis IP 32953 2953822 YP_070289.1 CDS YPTB1763 NC_006155.1 2116073 2116837 D similar to Salmonella typhi STY3675 terminase, ATPase subunit (38.3% evalue=7.E-40); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (38.3% evalue=7.E-40); hypothetical protein 2116073..2116837 Yersinia pseudotuberculosis IP 32953 2953823 YP_070290.1 CDS YPTB1764 NC_006155.1 2116834 2117871 D similar to Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (70.4% evalue=1.E-134); Ralstonia solanacearum RS03510 probable bacteriophage protein (64.8% evalue=1.E-133); capsid portal protein 2116834..2117871 Yersinia pseudotuberculosis IP 32953 2953824 YP_070291.1 CDS YPTB1765 NC_006155.1 2118623 2118982 R hypothetical protein complement(2118623..2118982) Yersinia pseudotuberculosis IP 32953 2953825 YP_070292.1 CDS YPTB1766 NC_006155.1 2119005 2121287 R similar to Salmonella typhi STY3668 possible endonuclease (34.4% evalue=1.E-63); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (32.8% evalue=2.E-63); phage P2 replication protein complement(2119005..2121287) Yersinia pseudotuberculosis IP 32953 2953826 YP_070293.1 CDS YPTB1767 NC_006155.1 2121274 2121546 R hypothetical protein complement(2121274..2121546) Yersinia pseudotuberculosis IP 32953 2953827 YP_070294.1 CDS YPTB1768 NC_006155.1 2121612 2121923 R gpB bacteriophage P2 complement(2121612..2121923) Yersinia pseudotuberculosis IP 32953 2953828 YP_070295.1 CDS YPTB1769 NC_006155.1 2122130 2122639 R similar to Salmonella typhi STY3662 cII; regulatory protein cII (52.9% evalue=2.E-48); Salmonella typhimurium STM2736 Fels-2 prophage: similar to retron in E coli and to protein cII of phages (51.7% evalue=4.E-48); regulatory protein CII bacteriophage 186 complement(2122130..2122639) Yersinia pseudotuberculosis IP 32953 2953829 YP_070296.1 CDS YPTB1770 NC_006155.1 2122694 2122891 R similar to Escherichia coli ECs2622 DNA-binding protein (48.2% evalue=2.E-09); Escherichia coli Z2970 coxT; regulator for prophage CP-933T (48.2% evalue=2.E-09); prophage regulator complement(2122694..2122891) Yersinia pseudotuberculosis IP 32953 2953830 YP_070297.1 CDS YPTB1771 NC_006155.1 2122962 2123573 D similar to Salmonella typhi STY4644 cI; phage repressor protein cI (35.4% evalue=2.E-22); Salmonella typhi STY3660 cI; repressor protein (34% evalue=1.E-24); CI repressor of phage 186 and others 2122962..2123573 Yersinia pseudotuberculosis IP 32953 2953831 YP_070298.1 CDS YPTB1772 NC_006155.1 2123601 2124872 D similar to Sulfolobus tokodaii ST2108 hypothetical purine NTPase (21.9% evalue=6.E-07); Salmonella typhimurium STM2746 Excinuclease ATPase subunit (44.9% evalue=8.E-97); hypothetical protein 2123601..2124872 Yersinia pseudotuberculosis IP 32953 2953832 YP_070299.1 CDS YPTB1773 NC_006155.1 2124872 2125750 D similar to Salmonella typhimurium STM2747 cytoplasmic protein (41.8% evalue=9.E-64); hypothetical protein 2124872..2125750 Yersinia pseudotuberculosis IP 32953 2953833 YP_070300.1 CDS YPTB1774 NC_006155.1 2125870 2126925 D similar to Escherichia coli ECs2617 integrase (57.9% evalue=1.E-110); Escherichia coli Z2966 intT; integrase for prophage CP-933T (57.9% evalue=1.E-110); integrase 2125870..2126925 Yersinia pseudotuberculosis IP 32953 2953834 YP_070301.1 CDS YPTB1775 NC_006155.1 2126922 2127968 D hypothetical protein 2126922..2127968 Yersinia pseudotuberculosis IP 32953 2953835 YP_070302.1 CDS YPTB1776 NC_006155.1 2128303 2129325 R similar to Escherichia coli ECs2773 integrase (46.8% evalue=7.E-79); Escherichia coli Z3130 intU; integrase for prophage CP-933U (46.8% evalue=7.E-79); integrase complement(2128303..2129325) Yersinia pseudotuberculosis IP 32953 2953836 YP_070303.1 CDS YPTB1777 NC_006155.1 2129645 2130148 R hypothetical protein complement(2129645..2130148) Yersinia pseudotuberculosis IP 32953 2953837 YP_070304.1 CDS YPTB1778 NC_006155.1 2130242 2130580 R hypothetical protein complement(2130242..2130580) Yersinia pseudotuberculosis IP 32953 2953838 YP_070305.1 CDS YPTB1779 NC_006155.1 2130712 2131575 R hypothetical protein complement(2130712..2131575) Yersinia pseudotuberculosis IP 32953 2953839 YP_070306.1 CDS YPTB1780 NC_006155.1 2131934 2132170 R hypothetical protein complement(2131934..2132170) Yersinia pseudotuberculosis IP 32953 2953840 YP_070307.1 CDS YPTB1781 NC_006155.1 2132407 2132835 R hypothetical protein complement(2132407..2132835) Yersinia pseudotuberculosis IP 32953 2953841 YP_070308.1 CDS YPTB1782 NC_006155.1 2132832 2133971 R hypothetical protein complement(2132832..2133971) Yersinia pseudotuberculosis IP 32953 2953842 YP_070309.1 CDS YPTB1783 NC_006155.1 2134016 2135620 R similar to Xylella fastidiosa XF1647 hypothetical protein (36.3% evalue=2.E-73); hypothetical protein complement(2134016..2135620) Yersinia pseudotuberculosis IP 32953 2953843 YP_070310.1 CDS YPTB1784 NC_006155.1 2135607 2136449 R similar to Xylella fastidiosa XF1648 hypothetical protein (46% evalue=4.E-55); hypothetical protein complement(2135607..2136449) Yersinia pseudotuberculosis IP 32953 2953844 YP_070311.1 CDS YPTB1785 NC_006155.1 2136750 2137088 R hypothetical protein complement(2136750..2137088) Yersinia pseudotuberculosis IP 32953 2953845 YP_070312.1 CDS YPTB1786 NC_006155.1 2137092 2137598 R hypothetical protein complement(2137092..2137598) Yersinia pseudotuberculosis IP 32953 2953846 YP_070313.1 CDS YPTB1787 NC_006155.1 2138463 2138732 R hypothetical protein complement(2138463..2138732) Yersinia pseudotuberculosis IP 32953 2953847 YP_070314.1 CDS YPTB1788 NC_006155.1 2138817 2139062 R hypothetical protein complement(2138817..2139062) Yersinia pseudotuberculosis IP 32953 2953848 YP_070315.1 CDS YPTB1789 NC_006155.1 2139340 2139957 R hypothetical protein complement(2139340..2139957) Yersinia pseudotuberculosis IP 32953 2953849 YP_070316.1 CDS YPTB1790 NC_006155.1 2139968 2140654 R similar to Yersinia pestis YPO1233 prophage repressor protein (46.9% evalue=2.E-49); Escherichia coli ECs0274 repressor protein CI (36.2% evalue=4.E-30); prophage repressor protein complement(2139968..2140654) Yersinia pseudotuberculosis IP 32953 2953850 YP_070317.1 CDS YPTB1791 NC_006155.1 2140734 2141024 D hypothetical protein 2140734..2141024 Yersinia pseudotuberculosis IP 32953 2953851 YP_070318.1 CDS YPTB1792 NC_006155.1 2141042 2141404 D hypothetical protein 2141042..2141404 Yersinia pseudotuberculosis IP 32953 2953852 YP_070319.1 CDS YPTB1793 NC_006155.1 2141589 2142434 D similar to Anabaena all7134 hypothetical protein (26.8% evalue=2.E-08); hypothetical protein 2141589..2142434 Yersinia pseudotuberculosis IP 32953 2953853 YP_070320.1 CDS YPTB1794 NC_006155.1 2142438 2143214 D hypothetical protein 2142438..2143214 Yersinia pseudotuberculosis IP 32953 2953854 YP_070321.1 CDS rdgC NC_006155.1 2143218 2144354 D Required for efficient pilin antigenic variation; recombination associated protein 2143218..2144354 Yersinia pseudotuberculosis IP 32953 2956410 YP_070322.1 CDS YPTB1796 NC_006155.1 2144354 2144701 D hypothetical protein 2144354..2144701 Yersinia pseudotuberculosis IP 32953 2953855 YP_070323.1 CDS YPTB1797 NC_006155.1 2144698 2145624 D similar to Xylella fastidiosa XF0641 DNA methyltransferase (32% evalue=6.E-36); Caulobacter crescentus CC0378 modification methylase CcrMI (27.6% evalue=4.E-17); DNA methyltransferase 2144698..2145624 Yersinia pseudotuberculosis IP 32953 2953856 YP_070324.1 CDS yfdM NC_006155.1 2145621 2146496 D similar to Escherichia coli b2356 yfdM; hypothetical protein (61.3% evalue=1.E-28); Escherichia coli JW2352 yfdM; Hypothetical protein (61.3% evalue=1.E-28); hypothetical protein 2145621..2146496 Yersinia pseudotuberculosis IP 32953 2957017 YP_070325.1 CDS YPTB1799 NC_006155.1 2146493 2148238 D similar to Mesorhizobium loti mlr8517 modification methylase (33.5% evalue=1.E-81); modification methylase 2146493..2148238 Yersinia pseudotuberculosis IP 32953 2953857 YP_070326.1 CDS YPTB1800 NC_006155.1 2148235 2148882 D similar to Escherichia coli ECs1956 hypothetical protein (31.8% evalue=2.E-16); Escherichia coli Z2385 unknown protein encoded within prophage CP-933R (31.8% evalue=2.E-16); hypothetical protein 2148235..2148882 Yersinia pseudotuberculosis IP 32953 2953858 YP_070327.1 CDS YPTB1801 NC_006155.1 2149276 2150211 D hypothetical protein 2149276..2150211 Yersinia pseudotuberculosis IP 32953 2953859 YP_070328.1 CDS YPTB1802 NC_006155.1 2150208 2150666 D hypothetical protein 2150208..2150666 Yersinia pseudotuberculosis IP 32953 2953860 YP_070329.1 CDS YPTB1803 NC_006155.1 2150978 2151787 D hypothetical protein 2150978..2151787 Yersinia pseudotuberculosis IP 32953 2953861 YP_070330.1 CDS YPTB1804 NC_006155.1 2151960 2152172 D similar to Escherichia coli ECs2969 holin protein (65.2% evalue=5.E-22); Escherichia coli Z1468 lysis protein S of bacteriophage BP-933W (65.2% evalue=5.E-22); holin protein 2151960..2152172 Yersinia pseudotuberculosis IP 32953 2953862 YP_070331.1 CDS YPTB1805 NC_006155.1 2152172 2152660 D similar to Escherichia coli ECs0819 probable endolysin (lysis protein) (lysozyme) (56.5% evalue=2.E-46); Escherichia coli Z0960 lysozyme protein R of prophage CP-933K (56.5% evalue=2.E-46); endolysin 2152172..2152660 Yersinia pseudotuberculosis IP 32953 2953863 YP_070332.1 CDS YPTB1806 NC_006155.1 2152792 2153310 D hypothetical protein 2152792..2153310 Yersinia pseudotuberculosis IP 32953 2953864 YP_070333.1 CDS YPTB1807 NC_006155.1 2153528 2153968 D hypothetical protein 2153528..2153968 Yersinia pseudotuberculosis IP 32953 2953865 YP_070334.1 CDS YPTB1808 NC_006155.1 2154075 2155097 D similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase IS100 2154075..2155097 Yersinia pseudotuberculosis IP 32953 2953866 YP_070335.1 CDS YPTB1809 NC_006155.1 2155097 2155876 D similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 2155097..2155876 Yersinia pseudotuberculosis IP 32953 2953867 YP_070336.1 CDS YPTB1810 NC_006155.1 2155994 2156851 D similar to Escherichia coli ECs1219 small subunit terminase (39.4% evalue=1.E-47); Escherichia coli Z1475 terminase small subunit of bacteriophage BP-933W (39.4% evalue=1.E-47); small subunit bacteriophage terminase 2155994..2156851 Yersinia pseudotuberculosis IP 32953 2953868 YP_070337.1 CDS YPTB1811 NC_006155.1 2156848 2158554 D similar to Escherichia coli ECs1220 terminase large subunit (70.5% evalue=0); Escherichia coli Z1476 partial terminase large subunit of bacteriophage BP-933W (70.5% evalue=0); bacteriophage terminase large subunit 2156848..2158554 Yersinia pseudotuberculosis IP 32953 2953869 YP_070338.1 CDS YPTB1812 NC_006155.1 2158554 2160674 D similar to Escherichia coli ECs1221 portal protein (68.8% evalue=0); Escherichia coli Z1477 portal protein of bacteriophage BP-933W (68.8% evalue=0); phage portal protein 2158554..2160674 Yersinia pseudotuberculosis IP 32953 2953870 YP_070339.1 CDS YPTB1813 NC_006155.1 2160944 2161993 D similar to Escherichia coli ECs1222 hypothetical protein (41.8% evalue=3.E-68); Escherichia coli Z1478 unknown protein encoded by bacteriophage BP-933W (41.8% evalue=3.E-68); phage l protein 2160944..2161993 Yersinia pseudotuberculosis IP 32953 2953871 YP_070340.1 CDS YPTB1814 NC_006155.1 2162053 2163276 D similar to Escherichia coli ECs1223 hypothetical protein (72.8% evalue=1.E-174); Escherichia coli Z1479 unknown protein encoded by bacteriophage BP-933W (72.8% evalue=1.E-174); hypothetical protein 2162053..2163276 Yersinia pseudotuberculosis IP 32953 2953872 YP_070341.1 CDS YPTB1815 NC_006155.1 2163354 2163737 D similar to Escherichia coli ECs1224 hypothetical protein (40% evalue=1.E-16); Escherichia coli Z1480 unknown protein encoded by bacteriophage BP-933W (40% evalue=1.E-16); hypothetical protein 2163354..2163737 Yersinia pseudotuberculosis IP 32953 2953873 YP_070342.1 CDS YPTB1816 NC_006155.1 2163803 2164255 D similar to Escherichia coli ECs1225 hypothetical protein (52.7% evalue=3.E-35); Escherichia coli Z1481 unknown protein encoded by bacteriophage BP-933W (52.7% evalue=3.E-35); hypothetical protein 2163803..2164255 Yersinia pseudotuberculosis IP 32953 2953874 YP_070343.1 CDS YPTB1817 NC_006155.1 2164258 2164854 D similar to Escherichia coli ECs1226 hypothetical protein (37.8% evalue=1.E-30); hypothetical protein 2164258..2164854 Yersinia pseudotuberculosis IP 32953 2953875 YP_070344.1 CDS YPTB1818 NC_006155.1 2164854 2165507 D similar to Escherichia coli ECs1227 hypothetical protein (58.7% evalue=6.E-69); Escherichia coli Z1482 unknown protein encoded by bacteriophage BP-933W (58.7% evalue=6.E-69); hypothetical protein 2164854..2165507 Yersinia pseudotuberculosis IP 32953 2953876 YP_070345.1 CDS YPTB1819 NC_006155.1 2165504 2167639 D similar to Yersinia pestis YPO2133 hypothetical phage protein (85.9% evalue=9.E-62); hypothetical protein 2165504..2167639 Yersinia pseudotuberculosis IP 32953 2953877 YP_070346.1 CDS YPTB1820 NC_006155.1 2167650 2168114 D similar to Yersinia pestis YPO2134 phage tail fiber assembly protein (86.3% evalue=5.E-67); Escherichia coli ECs1651 tail fiber assembly protein (31.8% evalue=6.E-10); phage tail fiber assembly protein 2167650..2168114 Yersinia pseudotuberculosis IP 32953 2953878 YP_070347.1 CDS YPTB1821 NC_006155.1 2168127 2168453 R similar to Yersinia pestis YPO1788 acyl carrier protein (70.3% evalue=9.E-40); Salmonella typhimurium STM2011 cytoplasmic protein (64.8% evalue=2.E-37); acyl carrier protein complement(2168127..2168453) Yersinia pseudotuberculosis IP 32953 2953879 YP_070348.1 CDS YPTB1822 NC_006155.1 2168447 2168911 R similar to Yersinia pestis YPO1789 membrane protein (76.6% evalue=2.E-62); Salmonella typhi STY2214 hypothetical protein (74% evalue=2.E-50); hypothetical protein complement(2168447..2168911) Yersinia pseudotuberculosis IP 32953 2953880 YP_070349.1 CDS YPTB1823 NC_006155.1 2169143 2170771 D similar to Escherichia coli ECs1232 hypothetical protein (56.1% evalue=1.E-176); Escherichia coli Z1486 unknown protein encoded by bacteriophage BP-933W (56.1% evalue=1.E-176); hypothetical protein 2169143..2170771 Yersinia pseudotuberculosis IP 32953 2953881 YP_070350.1 CDS YPTB1824 NC_006155.1 2170768 2171874 D similar to Escherichia coli ECs1233 tail tip fiber protein (47.9% evalue=1.E-101); Escherichia coli Z1487 unknown protein encoded by bacteriophage BP-933W (49.7% evalue=1.E-104); hypothetical protein 2170768..2171874 Yersinia pseudotuberculosis IP 32953 2953882 YP_070351.1 CDS YPTB1825 NC_006155.1 2171941 2172972 D similar to Yersinia pestis YPO2132 hypothetical phage protein (26.9% evalue=1.E-07); hypothetical protein 2171941..2172972 Yersinia pseudotuberculosis IP 32953 2953883 YP_070352.1 CDS YPTB1826 NC_006155.1 2172947 2173321 D similar to Escherichia coli ECs1237 hypothetical protein (53.8% evalue=5.E-31); Escherichia coli Z1490 unknown protein encoded by bacteriophage BP-933W (53.8% evalue=5.E-31); hypothetical protein 2172947..2173321 Yersinia pseudotuberculosis IP 32953 2953884 YP_070353.1 CDS YPTB1827 NC_006155.1 2173329 2173934 D similar to Escherichia coli ECs1238 hypothetical protein (53% evalue=2.E-51); Escherichia coli Z1491 unknown protein encoded by bacteriophage BP-933W (53% evalue=2.E-51); hypothetical protein 2173329..2173934 Yersinia pseudotuberculosis IP 32953 2953885 YP_070354.1 CDS YPTB1828 NC_006155.1 2173950 2174333 D similar to Escherichia coli ECs1239 hypothetical protein (58.4% evalue=1.E-33); Escherichia coli Z1492 unknown protein encoded by bacteriophage BP-933W (58.4% evalue=1.E-33); hypothetical protein 2173950..2174333 Yersinia pseudotuberculosis IP 32953 2953886 YP_070355.1 CDS YPTB1829 NC_006155.1 2174333 2174572 D similar to Escherichia coli ECs1240 hypothetical protein (46.9% evalue=4.E-15); Escherichia coli Z1493 unknown protein encoded by bacteriophage BP-933W (46.9% evalue=4.E-15); hypothetical protein 2174333..2174572 Yersinia pseudotuberculosis IP 32953 2953887 YP_070356.1 CDS YPTB1830 NC_006155.1 2174583 2175974 D similar to Escherichia coli ECs1241 hypothetical protein (28.4% evalue=6.E-40); Escherichia coli Z1494 unknown protein encoded by bacteriophage BP-933W (28.4% evalue=6.E-40); hypothetical protein 2174583..2175974 Yersinia pseudotuberculosis IP 32953 2953888 YP_070357.1 CDS YPTB1831 NC_006155.1 2176308 2182709 D similar to Escherichia coli ECs1242 hypothetical protein (40.4% evalue=0); hypothetical protein 2176308..2182709 Yersinia pseudotuberculosis IP 32953 2953889 YP_070358.1 CDS YPTB1832 NC_006155.1 2182663 2184330 D hypothetical protein 2182663..2184330 Yersinia pseudotuberculosis IP 32953 2953890 YP_070359.1 CDS YPTB1833 NC_006155.1 2184581 2184985 R hypothetical protein complement(2184581..2184985) Yersinia pseudotuberculosis IP 32953 2953891 YP_070360.1 CDS ogrK NC_006155.1 2185864 2186037 R similar to Salmonella typhi STY3703 positive regulator of late gene transcription (66% evalue=6.E-16); Escherichia coli JW2067 ogrK; Ogr protein (62.5% evalue=6.E-16); prophage p2 Ogr protein complement(2185864..2186037) Yersinia pseudotuberculosis IP 32953 2956186 YP_070361.1 CDS YPTB1835 NC_006155.1 2186112 2187206 R similar to Salmonella typhi STY3702 regulator of late gene expression (65.1% evalue=1.E-137); Salmonella typhi STY2882 bacteriophage late gene regulator (65.1% evalue=1.E-137); bacteriophage P2 GPD protein complement(2186112..2187206) Yersinia pseudotuberculosis IP 32953 2953892 YP_070362.1 CDS YPTB1836 NC_006155.1 2187203 2187667 R similar to Salmonella typhi STY4602 phage tail protein (58.7% evalue=3.E-49); Salmonella typhimurium STM2696 Fels-2 prophage: similar to genes in phage phiCTX (58.7% evalue=2.E-49); bacteriophage P2 tail protein complement(2187203..2187667) Yersinia pseudotuberculosis IP 32953 2953893 YP_070363.1 CDS YPTB1837 NC_006155.1 2187679 2190594 R similar to Salmonella typhi STY3700 hypothetical protein (30.2% evalue=1.E-114); Salmonella typhi STY2884 bacteriophage tail protein (30.2% evalue=1.E-114); tail fiber component T of bacteriophage P2 complement(2187679..2190594) Yersinia pseudotuberculosis IP 32953 2953894 YP_070364.1 CDS YPTB1838 NC_006155.1 2190587 2190709 R similar to Salmonella typhi STY3699 hypothetical protein (64.1% evalue=1.E-08); Salmonella typhi STY2885 bacteriophage protein (64.1% evalue=1.E-08); phage protein complement(2190587..2190709) Yersinia pseudotuberculosis IP 32953 2953895 YP_070365.1 CDS YPTB1839 NC_006155.1 2190721 2191068 R similar to Salmonella typhi STY4605 phage tail protein (50% evalue=2.E-20); Salmonella typhimurium STM2699 Fels-2 prophage: similar to genes in P2-like phages (51.6% evalue=3.E-20); hypothetical protein complement(2190721..2191068) Yersinia pseudotuberculosis IP 32953 2953896 YP_070366.1 CDS YPTB1840 NC_006155.1 2191122 2191637 R similar to Salmonella typhi STY2887 probable major tail tube protein (60.2% evalue=5.E-58); Salmonella typhimurium STM2700 Fels-2 prophage: similar to genes in P2-like phages (61.4% evalue=2.E-58); P2 tail tube protein complement(2191122..2191637) Yersinia pseudotuberculosis IP 32953 2953897 YP_070367.1 CDS YPTB1841 NC_006155.1 2191649 2192824 R similar to Salmonella typhi STY3696 probable major tail sheath protein (78.9% evalue=1.E-180); Salmonella typhi STY2888 bacteriophage major tail sheath protein (78.9% evalue=1.E-180); bacteriophage P2 tail sheath protein complement(2191649..2192824) Yersinia pseudotuberculosis IP 32953 2953898 YP_070368.1 CDS YPTB1842 NC_006155.1 2192958 2193437 R similar to Salmonella typhi STY3693 conserved hypothetical protein (39.1% evalue=2.E-08); Escherichia coli b2354 hypothetical protein (34.8% evalue=4.E-08); hypothetical protein complement(2192958..2193437) Yersinia pseudotuberculosis IP 32953 2953899 YP_070369.1 CDS YPTB1843 NC_006155.1 2193449 2194888 R similar to Salmonella typhi STY4611 probable phage tail fibre protein (73.3% evalue=2.E-72); Salmonella typhimurium STM2706 Fels-2 prophage: similar to tail fiber protein in phage P2 (73.8% evalue=9.E-73); hypothetical protein complement(2193449..2194888) Yersinia pseudotuberculosis IP 32953 2953900 YP_070370.1 CDS YPTB1844 NC_006155.1 2194885 2195493 R similar to Salmonella typhi STY4612 phage tail protein (59.8% evalue=3.E-69); Salmonella typhi STY3690 phage tail protein (59.8% evalue=3.E-69); bacteriophage P2 protein complement(2194885..2195493) Yersinia pseudotuberculosis IP 32953 2953901 YP_070371.1 CDS YPTB1845 NC_006155.1 2195486 2196394 R similar to Salmonella typhi STY4613 probable phage baseplate assembly protein (66.8% evalue=1.E-111); Salmonella typhi STY3689 phage baseplate assembly protein (67.5% evalue=1.E-113); bacteriophage P2-like protein complement(2195486..2196394) Yersinia pseudotuberculosis IP 32953 2953902 YP_070372.1 CDS YPTB1846 NC_006155.1 2196397 2196750 R similar to Yersinia pestis YPO1880 phage-related protein (95% evalue=2.E-38); Salmonella typhi STY3688 phage baseplate assembly protein (61.2% evalue=1.E-32); hypothetical protein complement(2196397..2196750) Yersinia pseudotuberculosis IP 32953 2953903 YP_070373.1 CDS YPTB1847 NC_006155.1 2196747 2197382 R similar to Salmonella typhi STY4615 phage baseplate assembly protein (45.9% evalue=1.E-43); Salmonella typhi STY3687 phage baseplate assembly protein (46.4% evalue=6.E-44); phage baseplate assembly protein V complement(2196747..2197382) Yersinia pseudotuberculosis IP 32953 2953904 YP_070374.1 CDS YPTB1848 NC_006155.1 2197713 2198429 R downstream intergenic space has region identical to intergenic region downstream of IS285 in Yersinia pestis; hypothetical protein complement(2197713..2198429) Yersinia pseudotuberculosis IP 32953 2953905 YP_070375.1 CDS YPTB1849 NC_006155.1 2198746 2199192 R similar to Salmonella typhi STY3686 phage tail protein (52% evalue=1.E-38); Salmonella typhimurium STM2711 Fels-2 prophage: similar to gpS for completion of tail, in phage P2 (49.6% evalue=3.E-37); O protein complement(2198746..2199192) Yersinia pseudotuberculosis IP 32953 2953906 YP_070376.1 CDS YPTB1850 NC_006155.1 2199189 2199656 R similar to Salmonella typhimurium STM2712 Fels-2 prophage: similar to gpR for completion of tail, in phage P2 (52.5% evalue=4.E-35); Ralstonia solanacearum RS03499 probable tail completion-like protein (53% evalue=1.E-35); P2 phage tail completion protein R complement(2199189..2199656) Yersinia pseudotuberculosis IP 32953 2953907 YP_070377.1 CDS YPTB1851 NC_006155.1 2199755 2200180 R similar to Salmonella typhi STY3684 regulatory protein (49.2% evalue=1.E-26); Salmonella typhimurium STM2714 Fels-2 prophage: similar to lysis protein (lysB) in phage P2 (47.7% evalue=4.E-25); hypothetical protein complement(2199755..2200180) Yersinia pseudotuberculosis IP 32953 2953908 YP_070378.1 CDS YPTB1852 NC_006155.1 2200185 2200580 R similar to Agrobacterium tumefaciens Atu0462 endolysin (56.4% evalue=3.E-38); Agrobacterium tumefaciens AGR_C_820 gp19 (56.4% evalue=3.E-38); bacteriophage P7-like protein complement(2200185..2200580) Yersinia pseudotuberculosis IP 32953 2953909 YP_070379.1 CDS YPTB1853 NC_006155.1 2200567 2200953 R hypothetical protein complement(2200567..2200953) Yersinia pseudotuberculosis IP 32953 2953910 YP_070380.1 CDS YPTB1854 NC_006155.1 2200983 2201186 R similar to Salmonella typhi STY4622 phage tail protein (70.1% evalue=2.E-24); Salmonella typhimurium STM2717 Fels-2 prophage: similar to gpX in phage P2 (70.1% evalue=2.E-24); WPhiphage-related tail protein complement(2200983..2201186) Yersinia pseudotuberculosis IP 32953 2953911 YP_070381.1 CDS YPTB1855 NC_006155.1 2201186 2201677 R similar to Salmonella typhi STY3679 capsid completion protein (46.8% evalue=3.E-31); Salmonella typhimurium STM2718 Fels-2 prophage: similar to gpQ in phage 186 (46.2% evalue=2.E-30); orf4 of phage P2 (gene L) complement(2201186..2201677) Yersinia pseudotuberculosis IP 32953 2953912 YP_070382.1 CDS YPTB1856 NC_006155.1 2201911 2202564 R similar to Salmonella typhi STY3678 terminase, endonuclease subunit (38.9% evalue=6.E-37); Ralstonia solanacearum RS03505 probable bacteriophage protein (38.4% evalue=6.E-41); R protein bacteriophage 186 gb|AAC34151.1| complement(2201911..2202564) Yersinia pseudotuberculosis IP 32953 2953913 YP_070383.1 CDS YPTB1857 NC_006155.1 2202571 2203626 R Bacteriophage PhiD5; similar to Salmonella typhi STY4625 major capsid protein (62.4% evalue=1.E-124); Salmonella typhi STY3677 major capsid protein (63% evalue=1.E-124); major capsid protein complement(2202571..2203626) Yersinia pseudotuberculosis IP 32953 2953914 YP_070384.1 CDS YPTB1858 NC_006155.1 2203663 2204478 R similar to Salmonella typhi STY4626 capsid protein (59.5% evalue=2.E-82); Salmonella typhi STY3676 capsid scaffolding protein (61.8% evalue=5.E-85); V protein phage 186 complement(2203663..2204478) Yersinia pseudotuberculosis IP 32953 2953915 YP_070385.1 CDS YPTB1859 NC_006155.1 2204649 2206412 D similar to Salmonella typhi STY4627 probable terminase subunit (63.8% evalue=0); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (63.7% evalue=0); gpP phage P2 terminase 2204649..2206412 Yersinia pseudotuberculosis IP 32953 2953916 YP_070386.1 CDS YPTB1860 NC_006155.1 2206460 2207452 D similar to Salmonella typhi STY4628 probable capsid portal protein (65.9% evalue=1.E-130); Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (67.2% evalue=1.E-132); capsid portal protein 2206460..2207452 Yersinia pseudotuberculosis IP 32953 2953917 YP_070387.1 CDS YPTB1861 NC_006155.1 2208134 2208478 R bacteriophage protein gp46 complement(2208134..2208478) Yersinia pseudotuberculosis IP 32953 2953918 YP_070388.1 CDS YPTB1862 NC_006155.1 2208686 2211241 R similar to Salmonella typhi STY3668 possible endonuclease (35.8% evalue=1.E-129); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (36.9% evalue=1.E-130); phage replication protein complement(2208686..2211241) Yersinia pseudotuberculosis IP 32953 2953919 YP_070389.1 CDS dam NC_006155.1 2211330 2212148 R similar to Salmonella typhi STY4636 DNA adenine methylase (54% evalue=2.E-74); Salmonella typhi STY3667 DNA adenine methylase (55% evalue=5.E-76); DNA adenine methylase complement(2211330..2212148) Yersinia pseudotuberculosis IP 32953 2955424 YP_070390.1 CDS YPTB1864 NC_006155.1 2212145 2212798 R similar to Salmonella typhi STY4637 exonuclease (54.4% evalue=3.E-45); C. muridarum TC0532 DNA polymerase III, epsilon subunit, (30.8% evalue=4.E-10); Orf81 bacteriophage 186 complement(2212145..2212798) Yersinia pseudotuberculosis IP 32953 2953920 YP_070391.1 CDS YPTB1865 NC_006155.1 2212855 2213622 R hypothetical protein complement(2212855..2213622) Yersinia pseudotuberculosis IP 32953 2953921 YP_070392.1 CDS YPTB1866 NC_006155.1 2213705 2214013 R hypothetical protein complement(2213705..2214013) Yersinia pseudotuberculosis IP 32953 2953922 YP_070393.1 CDS YPTB1867 NC_006155.1 2214041 2214301 R hypothetical protein complement(2214041..2214301) Yersinia pseudotuberculosis IP 32953 2953923 YP_070394.1 CDS YPTB1868 NC_006155.1 2214443 2214757 R hypothetical protein complement(2214443..2214757) Yersinia pseudotuberculosis IP 32953 2953924 YP_070395.1 CDS YPTB1869 NC_006155.1 2214972 2215175 R similar to Escherichia coli ECs2622 DNA-binding protein (64.1% evalue=7.E-17); Escherichia coli Z2970 coxT; regulator for prophage CP-933T (64.1% evalue=7.E-17); DNA-binding protein complement(2214972..2215175) Yersinia pseudotuberculosis IP 32953 2953925 YP_070396.1 CDS YPTB1870 NC_006155.1 2215440 2215808 D similar to Escherichia coli ECs2620 transcriptional regulator (41.5% evalue=1.E-12); Escherichia coli Z2969 unknown protein encoded by prophage CP-933T (41.5% evalue=1.E-12); prophage transcriptional regulator 2215440..2215808 Yersinia pseudotuberculosis IP 32953 2953926 YP_070397.1 CDS USO1 NC_006155.1 2215829 2217526 D similar to Saccharomyces cerevisiae YDL058W USO1, INT1; intracellular protein transport protein (21.3% evalue=1.E-11); A. thalianan At3g28770 T19N8.6; hypothetical protein (19.6% evalue=1.E-08); hypothetical protein 2215829..2217526 Yersinia pseudotuberculosis IP 32953 2956877 YP_070398.1 CDS YPTB1872 NC_006155.1 2217547 2217966 D similar to Escherichia coli ECs2617 integrase (58.5% evalue=3.E-34); Escherichia coli Z2966 intT; integrase for prophage CP-933T (58.5% evalue=3.E-34); bacteriophage integrase 2217547..2217966 Yersinia pseudotuberculosis IP 32953 2953927 YP_070399.1 CDS YPTB1873 NC_006155.1 2218035 2218415 D hypothetical protein 2218035..2218415 Yersinia pseudotuberculosis IP 32953 2953928 YP_070400.1 CDS YPTB1874 NC_006155.1 2218415 2218747 D similar to Escherichia coli ECs2617 integrase (63.8% evalue=2.E-34); Escherichia coli Z2966 intT; integrase for prophage CP-933T (63.8% evalue=2.E-34); bacteriophage integrase 2218415..2218747 Yersinia pseudotuberculosis IP 32953 2953929 YP_070401.1 CDS YPTB1875 NC_006155.1 2219041 2219418 D similar to Escherichia coli ECs2617 integrase (72.5% evalue=2.E-46); Escherichia coli Z2966 intT; integrase for prophage CP-933T (72.5% evalue=2.E-46); prophage integrase 2219041..2219418 Yersinia pseudotuberculosis IP 32953 2953930 YP_070402.1 CDS YPTB1879 NC_006155.1 2221109 2221255 D similar to Yersinia pestis YPO1870 hypothetical protein, 100% identical; hypothetical protein 2221109..2221255 Yersinia pseudotuberculosis IP 32953 2953933 YP_070403.1 CDS YPTB1880 NC_006155.1 2222076 2222318 R similar to Yersinia pestis YPO1871 hypothetical protein (64.5% evalue=8.E-20); M. musculus 14659 Glrp1, GRP-1; glutamine repeat protein 1 (64.1% evalue=3.E-10); hypothetical protein complement(2222076..2222318) Yersinia pseudotuberculosis IP 32953 2953934 YP_070404.1 CDS YPTB1881 NC_006155.1 2222344 2222688 R similar to Yersinia pestis YPO1872 hypothetical protein, 99% identical; hypothetical protein complement(2222344..2222688) Yersinia pseudotuberculosis IP 32953 2953935 YP_070405.1 CDS tnpA NC_006155.1 2222908 2223867 R similar to Yersinia pestis YPO1873 tnpA; transposase (98.1% evalue=0); Mycobacterium tuberculosis_CDC1551MT3534 IS1540, transposase (38.5% evalue=1.E-46); transposase complement(2222908..2223867) Yersinia pseudotuberculosis IP 32953 2956716 YP_070406.1 CDS YPTB1883 NC_006155.1 2223939 2224358 R similar to Yersinia pestis YPO1874 conserved hypothetical protein (100% evalue=3.E-74); hypothetical protein complement(2223939..2224358) Yersinia pseudotuberculosis IP 32953 2953936 YP_070407.1 CDS YPTB1884 NC_006155.1 2225288 2226646 D similar to Bacillus subtilis BG11115 yxaM, s14MR; similar to antibiotic resistance protein (26.6% evalue=4.E-18); B. burgdorferiBBI26 multidrug-efflux transporter (23.8% evalue=1.E-18); MFS superfamliy multidrug-efflux transporter 2225288..2226646 Yersinia pseudotuberculosis IP 32953 2953937 YP_070408.1 CDS YPTB1885 NC_006155.1 2226643 2228376 D similar to Lactococcus lactis L130150 yjdA; hypothetical protein (27.3% evalue=3.E-16); Agrobacterium tumefaciens AGR_C_1920 biotin synthesis protein BioC (32.9% evalue=1.E-14); thiazole biosynthesis adenylyltransferase ThiF 2226643..2228376 Yersinia pseudotuberculosis IP 32953 2953938 YP_070409.1 CDS YPTB1886 NC_006155.1 2228366 2229091 D similar to Helicobacter pylori_J99jhp0993 (34.4% evalue=5.E-27); C. jejuni Cj0590 hypothetical protein Cj0590 (32.6% evalue=1.E-31); hypothetical protein 2228366..2229091 Yersinia pseudotuberculosis IP 32953 2953939 YP_070410.1 CDS YPTB1887 NC_006155.1 2229079 2229933 D hypothetical protein 2229079..2229933 Yersinia pseudotuberculosis IP 32953 2953940 YP_070411.1 CDS YPTB1888 NC_006155.1 2229918 2230730 D similar to Pasteurella multocida PM1158 hypothetical HI0095 (28.2% evalue=4.E-13); B. halodurans BH0821 unknown conserved protein (30.3% evalue=2.E-10); hypothetical protein 2229918..2230730 Yersinia pseudotuberculosis IP 32953 2953941 YP_070412.1 CDS lysA NC_006155.1 2230727 2231893 D similar to Methanothermobacter thermautotrophicus MTH1335 diaminopimelate decarboxylase (25.5% evalue=2.E-24); A. fulgidus AF0800 lysA; diaminopimelate decarboxylase (28% evalue=2.E-24); diaminopimelate decarboxylase 2230727..2231893 Yersinia pseudotuberculosis IP 32953 2955975 YP_070413.1 CDS yjcK NC_006155.1 2231868 2232425 D similar to Bacillus subtilis BG13164 yjcK; similar to ribosomal-protein-alanine N-acetyltransferase (33.3% evalue=2.E-11); Brucella melitensis BMEI1452 ribosomal-protein-alanine acetyltransferase (30.2% evalue=7.E-10); ribosomal-protein-alanine acetyltransferase 2231868..2232425 Yersinia pseudotuberculosis IP 32953 2957084 YP_070414.1 CDS YPTB1891 NC_006155.1 2232455 2232757 R similar to Yersinia pestis YPCD1.63 transposase (90.9% evalue=5.E-16); Vibrio cholerae VC0817 transposase, (77.5% evalue=2.E-21); hypothetical protein complement(2232455..2232757) Yersinia pseudotuberculosis IP 32953 2953942 YP_070415.1 CDS tnpA NC_006155.1 2233095 2234054 R similar to Yersinia pestis YPO1873 tnpA; transposase (99% evalue=0); Mycobacterium tuberculosis_CDC1551MT3534 IS1540, transposase (38.8% evalue=1.E-47); transposase complement(2233095..2234054) Yersinia pseudotuberculosis IP 32953 2956717 YP_070416.1 CDS YPTB1895 NC_006155.1 2234943 2235197 R similar to Yersinia pestis YPO1876 hypothetical protein, 96% identical; hypothetical protein complement(2234943..2235197) Yersinia pseudotuberculosis IP 32953 2953945 YP_070417.1 CDS YPTB1896 NC_006155.1 2235202 2235507 R similar to Yersinia pestis YPO1877 hypothetical protein (99% evalue=5.E-57); Ralstonia solanacearum RS00212 hypothetical protein (52.5% evalue=2.E-17); hypothetical protein complement(2235202..2235507) Yersinia pseudotuberculosis IP 32953 2953946 YP_070418.1 CDS YPTB1897 NC_006155.1 2235504 2235719 R similar to Yersinia pestis YPO1878 hypothetical protein, 100% identical; hypothetical protein complement(2235504..2235719) Yersinia pseudotuberculosis IP 32953 2953947 YP_070419.1 CDS YPTB1898 NC_006155.1 2236154 2236441 R similar to Yersinia pestis YPO1879 hypothetical protein (98.9% evalue=3.E-52); hypothetical protein complement(2236154..2236441) Yersinia pseudotuberculosis IP 32953 2953948 YP_070420.1 CDS YPTB1899 NC_006155.1 2236458 2236757 R similar to Yersinia pestis YPO1880 phage-related protein (100% evalue=1.E-52); Salmonella typhi STY3688 phage baseplate assembly protein (71% evalue=2.E-26); hypothetical protein complement(2236458..2236757) Yersinia pseudotuberculosis IP 32953 2953949 YP_070421.1 CDS YPTB1900 NC_006155.1 2236754 2237113 R similar to Yersinia pestis YPO1881 phage-related protein (98.3% evalue=5.E-63); Salmonella typhi STY3687 phage baseplate assembly protein (54.1% evalue=2.E-18); hypothetical protein complement(2236754..2237113) Yersinia pseudotuberculosis IP 32953 2953950 YP_070422.1 CDS YPTB1901 NC_006155.1 2237144 2237416 D similar to Xylella fastidiosa XF1562 conserved hypothetical protein (52.9% evalue=5.E-17); Neisseria meningitidis NMB1118 conserved hypothetical protein (48.2% evalue=7.E-16); hypothetical protein 2237144..2237416 Yersinia pseudotuberculosis IP 32953 2953951 YP_070423.1 CDS YPTB1902 NC_006155.1 2237424 2237687 D similar to Yersinia pestis YPO1882 conserved hypothetical protein (100% evalue=1.E-46); Sinorhizobium meliloti SMc04432 hypothetical protein (46.8% evalue=2.E-12); hypothetical protein 2237424..2237687 Yersinia pseudotuberculosis IP 32953 2953952 YP_070424.1 CDS YPTB1905 NC_006155.1 2239737 2240075 D similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (91.9% evalue=2.E-57); transposase (IS285) 2239737..2240075 Yersinia pseudotuberculosis IP 32953 2953955 YP_070425.1 CDS YPTB1906 NC_006155.1 2240493 2241062 R similar to Yersinia pestis YPO1886 exported protein (100% evalue=1.E-103); hypothetical protein complement(2240493..2241062) Yersinia pseudotuberculosis IP 32953 2953956 YP_070426.1 CDS YPTB1907 NC_006155.1 2241074 2241508 R similar to Yersinia pestis YPO1887 hypothetical protein (98.6% evalue=5.E-77); hypothetical protein complement(2241074..2241508) Yersinia pseudotuberculosis IP 32953 2953957 YP_070427.1 CDS YPTB1910 NC_006155.1 2242477 2243274 D similar to Yersinia pestis YPO1890 GntR-family transcriptional regulatory protein (100% evalue=1.E-151); Caulobacter crescentus CC0445 transcriptional regulator, GntR family (41.2% evalue=2.E-48); GntR family transcriptional regulator 2242477..2243274 Yersinia pseudotuberculosis IP 32953 2953960 YP_070428.1 CDS YPTB1911 NC_006155.1 2243244 2243534 R similar to Yersinia pestis YPO1891 hypothetical protein, 100% identical.; hypothetical protein complement(2243244..2243534) Yersinia pseudotuberculosis IP 32953 2953961 YP_070429.1 CDS YPTB1912 NC_006155.1 2243942 2244955 D similar to Yersinia pestis YPO1892 oxidoreductase (99.7% evalue=0); Listeria monocytogenes lmo2800 similar to dehydrogenase (37.4% evalue=3.E-60); oxidoreductase 2243942..2244955 Yersinia pseudotuberculosis IP 32953 2953962 YP_070430.1 CDS YPTB1913 NC_006155.1 2244985 2246253 D similar to Yersinia pestis YPO1893 exported solute-binding protein (99.5% evalue=0); Agrobacterium tumefaciens AGR_L_841 smoE; periplasmic sorbitol-binding protein (30.9% evalue=2.E-43); sorbitol ABC transporter substrate-binding protein 2244985..2246253 Yersinia pseudotuberculosis IP 32953 2953963 YP_070431.1 CDS YPTB1914 NC_006155.1 2246320 2247180 D similar to Yersinia pestis YPO1894 binding-protein-dependent transport system, inner membrane component (100% evalue=1.E-160); Agrobacterium tumefaciens Atu2506 ABC transporter, membrane spanning protein [sugar] (40.6% evalue=1.E-59); sugar (sorbitol/trehalose/maltose) ABC transporter permease 2246320..2247180 Yersinia pseudotuberculosis IP 32953 2953964 YP_070432.1 CDS YPTB1915 NC_006155.1 2247173 2248000 D similar to Yersinia pestis YPO1895 binding-protein-dependent transport system, inner membrane component (100% evalue=1.E-154); Pseudomonas aeruginosa PA2340 multiple sugar transport system permease (40.6% evalue=1.E-51); sugar (sorbitol/trehalose/maltose) ABC transporter permease 2247173..2248000 Yersinia pseudotuberculosis IP 32953 2953965 YP_070433.1 CDS YPTB1916 NC_006155.1 2248025 2249167 D similar to Yersinia pestis YPO1896 binding-protein-dependent transport system, ATP-binding component (99.6% evalue=1.E-153); Vibrio cholerae VCA0946 maltose transport system ATP-binding protein (52.3% evalue=1.E-102); sugar ABC transporter ATP-binding protein 2248025..2249167 Yersinia pseudotuberculosis IP 32953 2953966 YP_070434.1 CDS YPTB1917 NC_006155.1 2249850 2250590 R similar to Yersinia pestis YPO1918 probable pili assembly chaperone (100% evalue=1.E-139); Escherichia coli Z1534 chaperone (44.6% evalue=6.E-46); pili assembly chaperone complement(2249850..2250590) Yersinia pseudotuberculosis IP 32953 2953967 YP_070435.1 CDS YPTB1918 NC_006155.1 2250587 2251936 R similar to Yersinia pestis YPO1919 exported protein (100% evalue=0); Escherichia coli Z1535 hypothetical protein (34.5% evalue=1.E-59); hypothetical protein complement(2250587..2251936) Yersinia pseudotuberculosis IP 32953 2953968 YP_070436.1 CDS YPTB1919 NC_006155.1 2251952 2254543 R similar to Yersinia pestis YPO1920 probable fimbrial usher protein (99.7% evalue=0); Escherichia coli Z1536 usher protein (44.6% evalue=0); outer membrane fimbrial usher porin complement(2251952..2254543) Yersinia pseudotuberculosis IP 32953 2953969 YP_070437.1 CDS YPTB1920 NC_006155.1 2254592 2255323 R similar to Yersinia pestis YPO1921 probable pili assembly chaperone (88% evalue=1.E-112); Escherichia coli Z1537 chaperone (41.3% evalue=3.E-47); pili assembly chaperone complement(2254592..2255323) Yersinia pseudotuberculosis IP 32953 2953970 YP_070438.1 CDS YPTB1921 NC_006155.1 2255416 2255946 R similar to Yersinia pestis YPO1922 fimbrial protein (100% evalue=7.E-94); Salmonella typhimurium STM0340 stbA; fimbriae; major subunit (46.3% evalue=8.E-34); fimbrial protein complement(2255416..2255946) Yersinia pseudotuberculosis IP 32953 2953971 YP_070439.1 CDS YPTB1922 NC_006155.1 2256327 2260355 R similar to Pseudomonas aeruginosa PA3946 probable two-component sensor (27.6% evalue=1.E-120); Pseudomonas aeruginosa PA3044 probable two-component sensor (36.5% evalue=1.E-89); two-component sensor complement(2256327..2260355) Yersinia pseudotuberculosis IP 32953 2953972 YP_070440.1 CDS YPTB1923 NC_006155.1 2260330 2260962 R similar to Yersinia pestis YPO1925 two-component response regulator (100% evalue=1.E-112); Salmonella typhimurium STM0549 fimZ; fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) (47.3% evalue=5.E-50); two-component response regulator complement(2260330..2260962) Yersinia pseudotuberculosis IP 32953 2953973 YP_070441.1 CDS YPTB1924 NC_006155.1 2261789 2263111 R similar to Yersinia pestis YPO1926 4-hydroxybutyrate coenzyme A transferase (99.5% evalue=0); Salmonella typhimurium STM3118 acetyl-CoA hydrolase (76.1% evalue=0); 4-hydroxybutyrate CoA-transferase complement(2261789..2263111) Yersinia pseudotuberculosis IP 32953 2953974 YP_070442.1 CDS YPTB1925 NC_006155.1 2263134 2263676 R similar to Yersinia pestis YPO1927 transcription regulatory protein (100% evalue=1.E-101); Salmonella typhimurium STM3119 monoamine oxidase (87.4% evalue=3.E-83); transcription regulatory protein complement(2263134..2263676) Yersinia pseudotuberculosis IP 32953 2953975 YP_070443.1 CDS YPTB1926 NC_006155.1 2263726 2264568 R similar to Yersinia pestis YPO1928 citrate lyase beta chain (100% evalue=1.E-152); Salmonella typhimurium STM3120 transcriptional regulator, LysR family (72.3% evalue=1.E-109); citrate lyase subunit beta complement(2263726..2264568) Yersinia pseudotuberculosis IP 32953 2953976 YP_070444.1 CDS YPTB1927 NC_006155.1 2264657 2265541 D similar to Yersinia pestis YPO1929 probable LysR-family transcriptional regulator (99.6% evalue=1.E-159); Salmonella typhimurium STM3121 transcriptional regulator, LysR family (78.6% evalue=1.E-123); LysR family transcriptional regulator 2264657..2265541 Yersinia pseudotuberculosis IP 32953 2953977 YP_070445.1 CDS YPTB1928 NC_006155.1 2265616 2266089 R similar to Yersinia pestis YPO1930 lipoprotein (98.7% evalue=1.E-89); lipoprotein complement(2265616..2266089) Yersinia pseudotuberculosis IP 32953 2953978 YP_070446.1 CDS YPTB1929 NC_006155.1 2266114 2266674 R similar to Yersinia pestis YPO1931 hypothetical protein (98.9% evalue=1.E-104); hypothetical protein complement(2266114..2266674) Yersinia pseudotuberculosis IP 32953 2953979 YP_070447.1 CDS YPTB1930 NC_006155.1 2266894 2268123 R similar to Yersinia pestis YPO1932 sugar transporter (100% evalue=0); Pseudomonas aeruginosa PA2114 probable MFS transporter (55.7% evalue=1.E-131); MFS aromatic acid symporter complement(2266894..2268123) Yersinia pseudotuberculosis IP 32953 2953980 YP_070448.1 CDS YPTB1931 NC_006155.1 2268189 2269058 R similar to Yersinia pestis YPO1933 dicarboxylic acid hydrolase (99.6% evalue=1.E-171); Ralstonia solanacearum RS05190 probable hydrolase transmembrane protein (33.5% evalue=3.E-36); dicarboxylic acid hydrolase complement(2268189..2269058) Yersinia pseudotuberculosis IP 32953 2953981 YP_070449.1 CDS YPTB1932 NC_006155.1 2269170 2270132 D similar to Yersinia pestis YPO1934 LysR-family transcriptional regulatory protein (100% evalue=0); Sinorhizobium meliloti SMa0498 LysR-type regulator (26.4% evalue=7.E-20); LysR family transcriptional regulator 2269170..2270132 Yersinia pseudotuberculosis IP 32953 2953982 YP_070450.1 CDS YPTB1933 NC_006155.1 2270437 2271036 R Part of the NQR complex which has six subunits NqrA, NqrB, NqrC, NqrD, NqrE and NqrF. NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Na(+)-translocating NADH-quinone reductase subunit E complement(2270437..2271036) Yersinia pseudotuberculosis IP 32953 2953983 YP_070451.1 CDS YPTB1934 NC_006155.1 2271388 2272548 D similar to Yersinia pestis YPO1936 aminotransferase (100% evalue=0); Pseudomonas aeruginosa PA1654 probable aminotransferase (49.8% evalue=1.E-100); aminotransferase 2271388..2272548 Yersinia pseudotuberculosis IP 32953 2953984 YP_070452.1 CDS ansP NC_006155.1 2272744 2274273 R similar to Yersinia pestis YPO1937 ansP; L-asparagine permease (100% evalue=0); Salmonella typhimurium STM1584 ansP; APC family, L-asparagine transport protein (79.5% evalue=0); APC family L-asparagine permease complement(2272744..2274273) Yersinia pseudotuberculosis IP 32953 2955197 YP_070453.1 CDS YPTB1936 NC_006155.1 2275038 2275808 R similar to Yersinia pestis YPO1938 probable deoR-family transcriptional regulatory protein (99.6% evalue=1.E-138); Escherichia coli JW2705 ygbI; Hypothetical transcriptional regulator (61.9% evalue=3.E-82); DeoR family transcriptional regulator complement(2275038..2275808) Yersinia pseudotuberculosis IP 32953 2953985 YP_070454.1 CDS YPTB1937 NC_006155.1 2277019 2278026 D catalyzes the formation of glutamate from glutamine; glutaminase 2277019..2278026 Yersinia pseudotuberculosis IP 32953 2953986 YP_070455.1 CDS YPTB1938 NC_006155.1 2278137 2279777 D similar to Yersinia pestis YPO1940 membrane protein (100% evalue=0); Sinorhizobium meliloti SMa0185 possible transmembrane-transport protein (25.5% evalue=3.E-28); MFS superfamily multidrug efflux transporter 2278137..2279777 Yersinia pseudotuberculosis IP 32953 2953987 YP_070456.1 CDS YPTB1939 NC_006155.1 2280377 2282296 D similar to Yersinia pestis YPO1941 membrane protein (99.8% evalue=0); Pasteurella multocida PM0453 hypothetical Yersinia pestis (64.2% evalue=0); high-affinity Fe2+/Pb2+ permease 2280377..2282296 Yersinia pseudotuberculosis IP 32953 2953988 YP_070457.1 CDS YPTB1940 NC_006155.1 2282500 2283027 D similar to Yersinia pestis YPO1942 exported protein (100% evalue=1.E-100); Pasteurella multocida PM0452 hypothetical Yersinia pestis (81.5% evalue=1.E-84); hypothetical protein 2282500..2283027 Yersinia pseudotuberculosis IP 32953 2953989 YP_070458.1 CDS YPTB1941 NC_006155.1 2283328 2284737 D similar to Yersinia pestis YPO1943 membrane protein (100% evalue=0); Pasteurella multocida PM0451 hypothetical Yersinia pestis (49.2% evalue=1.E-122); hypothetical protein 2283328..2284737 Yersinia pseudotuberculosis IP 32953 2953990 YP_070459.1 CDS YPTB1942 NC_006155.1 2284740 2286032 D similar to Yersinia pestis YPO1944 membrane protein (100% evalue=0); Pasteurella multocida PM0450 hypothetical ABC transporter (67.5% evalue=1.E-162); ABC transporter permease 2284740..2286032 Yersinia pseudotuberculosis IP 32953 2953991 YP_070460.1 CDS YPTB1943 NC_006155.1 2286022 2287203 D similar to Yersinia pestis YPO1945 membrane protein (98.4% evalue=0); Pasteurella multocida PM0449 hypothetical Yersinia pestis (67.3% evalue=1.E-139); ABC transporter permease 2286022..2287203 Yersinia pseudotuberculosis IP 32953 2953992 YP_070461.1 CDS YPTB1944 NC_006155.1 2287207 2287920 D similar to Yersinia pestis YPO1946 ABC transporter, ATP-binding protein (99.5% evalue=1.E-132); Pasteurella multocida PM0448 hypothetical Yersinia pestis (77.6% evalue=3.E-94); ABC transporter ATP-binding protein 2287207..2287920 Yersinia pseudotuberculosis IP 32953 2953993 YP_070462.1 CDS YPTB1945 NC_006155.1 2287877 2288407 D similar to Yersinia pestis YPO1947 thioredoxin (100% evalue=3.E-91); Pasteurella multocida PM0447 resA; cytochrome c biogenesis protein, (38.7% evalue=3.E-30); thioredoxin 2287877..2288407 Yersinia pseudotuberculosis IP 32953 2953994 YP_070463.1 CDS YPTB1946 NC_006155.1 2288404 2288718 D similar to Yersinia pestis YPO1948 cytochrome (100% evalue=8.E-54); Pasteurella multocida PM0446 cytochrome c-553 homolog (40.2% evalue=5.E-14); cytochrome 2288404..2288718 Yersinia pseudotuberculosis IP 32953 2953995 YP_070464.1 CDS tehB NC_006155.1 2288891 2289778 D with TehA confers resistance to tellurite; tellurite resistance protein TehB 2288891..2289778 Yersinia pseudotuberculosis IP 32953 2956675 YP_070465.1 CDS YPTB1948 NC_006155.1 2289919 2291136 D similar to Yersinia pestis YPO1950 peptidase (99.5% evalue=0); Agrobacterium tumefaciens AGR_L_3328 hypothetical protein (32.7% evalue=3.E-45); endopeptidase 2289919..2291136 Yersinia pseudotuberculosis IP 32953 2953996 YP_070466.1 CDS hmsH NC_006155.1 2291805 2294273 D in Yersinia this protein is important for biofilm formation and hemin adsorption; hypothetical protein 2291805..2294273 Yersinia pseudotuberculosis IP 32953 2955806 YP_070467.1 CDS hmsF NC_006155.1 2294286 2296307 D in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; outer membrane N-deacetylase 2294286..2296307 Yersinia pseudotuberculosis IP 32953 2955805 YP_070468.2 CDS hmsR NC_006155.1 2296297 2297631 D predicted polysaccharide polymerase involved in biofilm formation; in Escherichia coli the related protein PgaC is required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 2296297..2297631 Yersinia pseudotuberculosis IP 32953 2955807 YP_070469.1 CDS hmsS NC_006155.1 2297628 2298095 D in Yersinia this gene is involved in biofilm formation and hemin adsorption; hemin storage system protein 2297628..2298095 Yersinia pseudotuberculosis IP 32953 2955808 YP_070470.1 CDS YPTB1953 NC_006155.1 2298444 2299343 D similar to Yersinia pestis YPO1955 acetyltransferase (99.6% evalue=0); Brucella melitensis BMEII0002 ribosomal-protein-serine acetyltransferase (44% evalue=5.E-52); acetyltransferase 2298444..2299343 Yersinia pseudotuberculosis IP 32953 2953997 YP_070471.1 CDS YPTB1954 NC_006155.1 2299782 2300060 D similar to Yersinia pestis YPO1956 hypothetical protein (100% evalue=4.E-48); hypothetical protein 2299782..2300060 Yersinia pseudotuberculosis IP 32953 2953998 YP_070472.1 CDS phoH NC_006155.1 2300120 2300908 D similar to Yersinia pestis YPO1957 phoH, psiH; phosphate starvation-inducible protein (100% evalue=1.E-144); Salmonella typhimurium STM1126 phoH; PhoB-dependent, ATP-binding pho regulon component (89.6% evalue=1.E-133); hypothetical protein 2300120..2300908 Yersinia pseudotuberculosis IP 32953 2956267 YP_070473.1 CDS chaA NC_006155.1 2301011 2302111 R similar to Yersinia pestis YPO1958 chaA; calcium/proton antiporter (100% evalue=0); Salmonella typhimurium STM1771 chaA; CaCA family, sodium-calcium/proton antiporter (79.7% evalue=1.E-155); calcium/sodium:proton antiporter complement(2301011..2302111) Yersinia pseudotuberculosis IP 32953 2955322 YP_070474.1 CDS narX NC_006155.1 2302678 2304459 R similar to Yersinia pestis YPO1959 narX, narR; nitrate/nitrite sensor protein (99.8% evalue=0); Escherichia coli ECs1727 nitrate/nitrite sensor protein NarX (47.8% evalue=1.E-150); nitrate/nitrite sensor protein NarX complement(2302678..2304459) Yersinia pseudotuberculosis IP 32953 2956132 YP_070475.1 CDS YPTB1958 NC_006155.1 2304769 2306190 D similar to Yersinia pestis YPO1960 GntR-family regulatory protein (100% evalue=0); Escherichia coli JW1434 yjiR; Hypothetical protein (56.7% evalue=1.E-155); GntR family transcriptional regulator 2304769..2306190 Yersinia pseudotuberculosis IP 32953 2953999 YP_070476.1 CDS argD NC_006155.1 2306851 2308095 D catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase 2306851..2308095 Yersinia pseudotuberculosis IP 32953 2955253 YP_070477.1 CDS astA NC_006155.1 2308125 2309177 D similar to Yersinia pestis YPO1963 astA; arginine N-succinyltransferase (99.7% evalue=0); Escherichia coli ECs2453 arginine N-succinyltransferase (63.4% evalue=1.E-121); arginine succinyltransferase 2308125..2309177 Yersinia pseudotuberculosis IP 32953 2955251 YP_070478.1 CDS astD NC_006155.1 2309174 2310691 D a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 2309174..2310691 Yersinia pseudotuberculosis IP 32953 2955254 YP_070479.1 CDS astB NC_006155.1 2310715 2312058 D catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2310715..2312058 Yersinia pseudotuberculosis IP 32953 2955252 YP_070480.1 CDS astE NC_006155.1 2312116 2313111 D catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2312116..2313111 Yersinia pseudotuberculosis IP 32953 2955255 YP_070481.1 CDS ompC2 NC_006155.1 2313838 2314920 D similar to Yersinia pestis YPO1411 outer membrane porin C protein (59.8% evalue=1.E-116); outer membrane protein OmpC 2313838..2314920 Yersinia pseudotuberculosis IP 32953 2956189 YP_070482.1 CDS hutG NC_006155.1 2315515 2316321 R similar to Yersinia pestis YPO1971 hutG; N-formylglutamate amidohydrolase (99.6% evalue=1.E-155); Pseudomonas aeruginosa PA5091 hutG; N-formylglutamate amidohydrolase (60.2% evalue=4.E-91); N-formylglutamate amidohydrolase complement(2315515..2316321) Yersinia pseudotuberculosis IP 32953 2955852 YP_070483.1 CDS hutI NC_006155.1 2316318 2317538 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2316318..2317538) Yersinia pseudotuberculosis IP 32953 2955854 YP_070484.1 CDS hutC NC_006155.1 2317742 2318509 R similar to Yersinia pestis YPO1973 hutC; GntR-family transcriptional regulatory protein (99.2% evalue=1.E-143); Pseudomonas aeruginosa PA5105 hutC; histidine utilization repressor HutC (64% evalue=2.E-87); GntR family transcriptional regulator complement(2317742..2318509) Yersinia pseudotuberculosis IP 32953 2955851 YP_070485.1 CDS YPTB1968 NC_006155.1 2318657 2320027 D catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2318657..2320027 Yersinia pseudotuberculosis IP 32953 2954000 YP_070486.1 CDS YPTB1969 NC_006155.1 2320027 2320599 D similar to Yersinia pestis YPO1975 conserved hypothetical protein (98.9% evalue=1.E-110); Escherichia coli Z2774 hypothetical protein (37.4% evalue=1.E-23); hypothetical protein 2320027..2320599 Yersinia pseudotuberculosis IP 32953 2954001 YP_070487.1 CDS YPTB1970 NC_006155.1 2320777 2322774 R similar to Yersinia pestis YPO1976 hypothetical protein (98% evalue=0); hypothetical protein complement(2320777..2322774) Yersinia pseudotuberculosis IP 32953 2954002 YP_070488.1 CDS YPTB1971 NC_006155.1 2323411 2324418 D similar to Neisseria meningitidis NMB1916 3-oxoacyl-(acyl-carrier-protein) synthase III (30% evalue=8.E-38); Agrobacterium tumefaciens AGR_C_2178 3-oxoacyl-[acyl-carrier-protein] synthase III (31% evalue=1.E-37); 3-oxoacyl-ACP synthase 2323411..2324418 Yersinia pseudotuberculosis IP 32953 2954003 YP_070489.1 CDS YPTB1972 NC_006155.1 2324432 2325448 D similar to Yersinia pestis YPO1979 dehydrogenase (99.7% evalue=0); dehydrogenase 2324432..2325448 Yersinia pseudotuberculosis IP 32953 2954004 YP_070490.1 CDS YPTB1973 NC_006155.1 2325441 2326247 D similar to Yersinia pestis YPO1980 conserved hypothetical protein (98.5% evalue=1.E-156); Xylella fastidiosa XF1361 conserved hypothetical protein (24.5% evalue=3.E-09); hypothetical protein 2325441..2326247 Yersinia pseudotuberculosis IP 32953 2954005 YP_070491.1 CDS YPTB1974 NC_006155.1 2326244 2327530 D similar to Yersinia pestis YPO1981 coenzyme synthetase (99% evalue=0); Vibrio cholerae VC0924 capK protein, (33.3% evalue=2.E-10); coenzyme synthetase 2326244..2327530 Yersinia pseudotuberculosis IP 32953 2954006 YP_070492.1 CDS YPTB1975 NC_006155.1 2327715 2328626 D similar to Yersinia pestis YPO1982 dehydrogenase (99.3% evalue=1.E-172); Pseudomonas aeruginosa PA4361 probable oxidoreductase (29.3% evalue=5.E-25); dehydrogenase 2327715..2328626 Yersinia pseudotuberculosis IP 32953 2954007 YP_070493.1 CDS YPTB1976 NC_006155.1 2328626 2329780 D similar to Yersinia pestis YPO1983 glycosyl transferase (99.7% evalue=0); H. sapiens 7357 UGCG, GCS; UDP-glucose ceramide glucosyltransferase (21.7% evalue=3.E-11); glycosyl transferase family protein 2328626..2329780 Yersinia pseudotuberculosis IP 32953 2954008 YP_070494.1 CDS YPTB1977 NC_006155.1 2329777 2330361 D similar to Yersinia pestis YPO1984 hypothetical protein (100% evalue=1.E-110); hypothetical protein 2329777..2330361 Yersinia pseudotuberculosis IP 32953 2954009 YP_070495.1 CDS YPTB1978 NC_006155.1 2330358 2331545 D similar to Yersinia pestis YPO1985 glycosyl transferase (99.7% evalue=0); glycosyl transferase family protein 2330358..2331545 Yersinia pseudotuberculosis IP 32953 2954010 YP_070496.1 CDS YPTB1979 NC_006155.1 2331706 2332170 R similar to Yersinia pestis YPO1986 exported protein (99.3% evalue=4.E-84); hypothetical protein complement(2331706..2332170) Yersinia pseudotuberculosis IP 32953 2954011 YP_070497.1 CDS YPTB1980 NC_006155.1 2332340 2334058 R similar to Yersinia pestis YPO1987 hypothetical protein (99.6% evalue=0); Salmonella typhimurium STM2008 periplasmic protein (46% evalue=1.E-150); hypothetical protein complement(2332340..2334058) Yersinia pseudotuberculosis IP 32953 2954012 YP_070498.1 CDS YPTB1981 NC_006155.1 2334122 2336284 R similar to Yersinia pestis YPO1989 exported protein (98.8% evalue=0); Salmonella typhimurium STM2007 TPR repeat protein (55.8% evalue=0); hypothetical protein complement(2334122..2336284) Yersinia pseudotuberculosis IP 32953 2954013 YP_070499.1 CDS YPTB1982 NC_006155.1 2336862 2338973 D similar to Yersinia pestis YPO1990 membrane protein (99.4% evalue=0); Salmonella typhimurium STM2135 inner membrane protein (36.4% evalue=1.E-127); hypothetical protein 2336862..2338973 Yersinia pseudotuberculosis IP 32953 2954014 YP_070500.1 CDS YPTB1983 NC_006155.1 2339220 2339858 D similar to Yersinia pestis YPO1991 sugar-phosphate isomerase (100% evalue=1.E-119); Salmonella typhimurium STM1933 ribose 5-phosphate isomerase (88.6% evalue=1.E-105); hypothetical protein 2339220..2339858 Yersinia pseudotuberculosis IP 32953 2954015 YP_070501.1 CDS YPTB1984 NC_006155.1 2339993 2340652 R similar to Yersinia pestis YPO1992 conserved hypothetical protein (100% evalue=1.E-128); Escherichia coli Z1925 unknown protein encoded by prophage CP-933X (60% evalue=1.E-73); hypothetical protein complement(2339993..2340652) Yersinia pseudotuberculosis IP 32953 2954016 YP_070502.1 CDS YPTB1985 NC_006155.1 2340757 2341437 R similar to Yersinia pestis YPO1993 dehydrogenase (99.5% evalue=1.E-125); Halobacterium VNG0115G yusZ1; oxidoreductase (32.1% evalue=6.E-24); dehydrogenase complement(2340757..2341437) Yersinia pseudotuberculosis IP 32953 2954017 YP_070503.1 CDS YPTB1986 NC_006155.1 2341778 2342728 R similar to Yersinia pestis YPO1995 hypothetical protein (37.5% evalue=6.E-43); hypothetical protein complement(2341778..2342728) Yersinia pseudotuberculosis IP 32953 2954018 YP_070504.1 CDS YPTB1987 NC_006155.1 2342715 2343647 R similar to Yersinia pestis YPO1995 hypothetical protein (100% evalue=1.E-177); hypothetical protein complement(2342715..2343647) Yersinia pseudotuberculosis IP 32953 2954019 YP_070505.1 CDS YPTB1988 NC_006155.1 2343653 2344558 R similar to Yersinia pestis YPO1996 hypothetical protein (100% evalue=1.E-167); hypothetical protein complement(2343653..2344558) Yersinia pseudotuberculosis IP 32953 2954020 YP_070506.1 CDS YPTB1989 NC_006155.1 2345338 2346411 R similar to Yersinia pestis YPO1997 exported protein (99.4% evalue=0); hypothetical protein complement(2345338..2346411) Yersinia pseudotuberculosis IP 32953 2954021 YP_070507.1 CDS YPTB1990 NC_006155.1 2346624 2347094 R similar to Yersinia pestis YPO1998 exported protein (100% evalue=6.E-87); Sinorhizobium meliloti SMc01911 conserved hypothetical protein (57.7% evalue=1.E-40); hypothetical protein complement(2346624..2347094) Yersinia pseudotuberculosis IP 32953 2954022 YP_070508.1 CDS YPTB1991 NC_006155.1 2347149 2347571 R similar to Yersinia pestis YPO1999 decarboxylase (99.2% evalue=4.E-73); Ralstonia solanacearum RS03072 probable 4-carboxymuconolactone decarboxylase (54.6% evalue=2.E-25); decarboxylase complement(2347149..2347571) Yersinia pseudotuberculosis IP 32953 2954023 YP_070509.1 CDS YPTB1992 NC_006155.1 2347848 2349239 R similar to Yersinia pestis YPO2000 two-component system sensor protein (99.5% evalue=0); Pseudomonas aeruginosa PA1438 probable two-component sensor (42.3% evalue=2.E-91); two-component system sensor protein complement(2347848..2349239) Yersinia pseudotuberculosis IP 32953 2954024 YP_070510.1 CDS copR NC_006155.1 2349245 2349937 R similar to Yersinia pestis YPO2001 copR; transcriptional activator (99.5% evalue=1.E-124); Pseudomonas aeruginosa PA1437 probable two-component response regulator (66% evalue=3.E-76); transcriptional activator complement(2349245..2349937) Yersinia pseudotuberculosis IP 32953 2955349 YP_070511.1 CDS YPTB1994 NC_006155.1 2350202 2351293 D similar to Yersinia pestis YPO2002 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs1909 hypothetical protein (36.9% evalue=8.E-50); hypothetical protein 2350202..2351293 Yersinia pseudotuberculosis IP 32953 2954025 YP_070512.1 CDS YPTB1995 NC_006155.1 2351484 2352149 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 2351484..2352149 Yersinia pseudotuberculosis IP 32953 2954026 YP_070513.1 CDS YPTB1996 NC_006155.1 2352164 2352859 D similar to Yersinia pestis YPO2004 membrane protein (99.5% evalue=1.E-132); Pasteurella multocida PM1936 unknown (53.1% evalue=6.E-66); hypothetical protein 2352164..2352859 Yersinia pseudotuberculosis IP 32953 2954027 YP_070514.1 CDS YPTB1997 NC_006155.1 2353066 2353908 R similar to Yersinia pestis YPO2005 exported protein (98.9% evalue=1.E-166); hypothetical protein complement(2353066..2353908) Yersinia pseudotuberculosis IP 32953 2954028 YP_070515.1 CDS ychF NC_006155.1 2354015 2355106 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2354015..2355106) Yersinia pseudotuberculosis IP 32953 2956984 YP_070516.1 CDS pth NC_006155.1 2355271 2355861 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2355271..2355861) Yersinia pseudotuberculosis IP 32953 2956357 YP_070517.1 CDS YPTB2000 NC_006155.1 2356223 2356495 D YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2356223..2356495 Yersinia pseudotuberculosis IP 32953 2954029 YP_070518.1 CDS prsA NC_006155.1 2356697 2357644 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(2356697..2357644) Yersinia pseudotuberculosis IP 32953 2956331 YP_070519.1 CDS ipk NC_006155.1 2357985 2358884 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(2357985..2358884) Yersinia pseudotuberculosis IP 32953 2955894 YP_070520.1 CDS lolB NC_006155.1 2358886 2359509 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; molecular chaperone LolB complement(2358886..2359509) Yersinia pseudotuberculosis IP 32953 2954030 YP_070521.2 CDS hemA NC_006155.1 2359815 2361077 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2359815..2361077 Yersinia pseudotuberculosis IP 32953 2955773 YP_070522.1 CDS prfA NC_006155.1 2361110 2362192 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2361110..2362192 Yersinia pseudotuberculosis IP 32953 2956316 YP_070523.1 CDS YPTB2006 NC_006155.1 2362192 2363022 D HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2362192..2363022 Yersinia pseudotuberculosis IP 32953 2954031 YP_070524.1 CDS YPTB2007 NC_006155.1 2363086 2363487 D similar to Yersinia pestis YPO2019 membrane protein (100% evalue=2.E-73); Salmonella typhimurium STM1774 sirC; Regulation of invasion genes (55.8% evalue=4.E-32); hypothetical protein 2363086..2363487 Yersinia pseudotuberculosis IP 32953 2954032 YP_070525.1 CDS YPTB2008 NC_006155.1 2363484 2364293 D similar to Yersinia pestis YPO2020 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM1773 ychA; transcriptional regulator (63.9% evalue=5.E-98); transcriptional regulator 2363484..2364293 Yersinia pseudotuberculosis IP 32953 2954033 YP_070526.1 CDS kdsA NC_006155.1 2364389 2365243 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2364389..2365243 Yersinia pseudotuberculosis IP 32953 2955918 YP_070527.1 CDS tnp NC_006155.1 2365741 2366199 D similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase for the IS1541 insertion element 2365741..2366199 Yersinia pseudotuberculosis IP 32953 2956712 YP_070528.1 CDS ychM NC_006155.1 2366323 2368020 R role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM complement(2366323..2368020) Yersinia pseudotuberculosis IP 32953 2956985 YP_070529.1 CDS YPTB2012 NC_006155.1 2369079 2369954 R similar to Yersinia pestis YPO3232 exported protein (45.7% evalue=3.E-63); hypothetical protein complement(2369079..2369954) Yersinia pseudotuberculosis IP 32953 2954034 YP_070530.1 CDS YPTB2013 NC_006155.1 2370255 2371337 R similar to Yersinia pestis YPO2029 exported protein (99.7% evalue=0); Agrobacterium tumefaciens Atu4568 ABC transporter, substrate binding protein (23% evalue=2.E-13); ABC transporter substrate-binding protein complement(2370255..2371337) Yersinia pseudotuberculosis IP 32953 2954035 YP_070531.1 CDS YPTB2014 NC_006155.1 2371357 2372193 R similar to Yersinia pestis YPO2030 binding-protein-dependent transport system membrane protein (99.2% evalue=1.E-154); Agrobacterium tumefaciens Atu4571 ABC transporter, membrane spanning protein (34.9% evalue=5.E-39); ABC transporter permease complement(2371357..2372193) Yersinia pseudotuberculosis IP 32953 2954036 YP_070532.1 CDS YPTB2015 NC_006155.1 2372190 2373056 R similar to Yersinia pestis YPO2031 binding-protein-dependent transport system membrane protein (100% evalue=1.E-160); Agrobacterium tumefaciens Atu4570 ABC transporter, membrane spanning protein (27.2% evalue=1.E-26); ABC transporter permease complement(2372190..2373056) Yersinia pseudotuberculosis IP 32953 2954037 YP_070533.1 CDS YPTB2016 NC_006155.1 2373053 2374105 R similar to Mesorhizobium loti mll6255 ABC transporter ATP-binding component (44.5% evalue=2.E-68); Agrobacterium tumefaciens Atu4569 ABC transporter, nucleotide binding/ATPase (45.4% evalue=8.E-68); ABC transporter ATP-binding protein complement(2373053..2374105) Yersinia pseudotuberculosis IP 32953 2954038 YP_070534.1 CDS YPTB2017 NC_006155.1 2374304 2375134 D similar to Yersinia pestis YPO2035 hypothetical protein (99.6% evalue=1.E-160); Agrobacterium tumefaciens Atu6144 accF; agrocinopine phosphodiesterase (31.5% evalue=1.E-24); hypothetical protein 2374304..2375134 Yersinia pseudotuberculosis IP 32953 2954039 YP_070535.1 CDS YPTB2018 NC_006155.1 2375106 2376260 D similar to Yersinia pestis YPO2036 transcriptional regulatory protein (100% evalue=0); Agrobacterium tumefaciens AGR_L_592 hypothetical 41.6 KD protein Y4FQ (31.3% evalue=2.E-43); transcriptional regulator 2375106..2376260 Yersinia pseudotuberculosis IP 32953 2954040 YP_070536.1 CDS YPTB2019 NC_006155.1 2376895 2377632 D similar to Yersinia pestis YPO2037 conserved hypothetical protein (100% evalue=1.E-142); Salmonella typhimurium STM1136 ycdX; Histidinol phosphatase and related hydrolases of the PHP family (77.5% evalue=1.E-112); hydrolase 2376895..2377632 Yersinia pseudotuberculosis IP 32953 2954041 YP_070537.1 CDS YPTB2020 NC_006155.1 2377669 2378229 D similar to Yersinia pestis YPO2038 conserved hypothetical protein (100% evalue=1.E-106); Escherichia coli JW1018 ycdY; Hypothetical protein (65.9% evalue=8.E-68); hypothetical protein 2377669..2378229 Yersinia pseudotuberculosis IP 32953 2954042 YP_070538.1 CDS YPTB2021 NC_006155.1 2378526 2379089 R similar to Yersinia pestis YPO2039 lipoprotein (100% evalue=1.E-102); Salmonella typhimurium STM1164 yceB; outer membrane lipoprotein (65.7% evalue=7.E-66); hypothetical protein complement(2378526..2379089) Yersinia pseudotuberculosis IP 32953 2954043 YP_070539.1 CDS yceL NC_006155.1 2379514 2380719 R Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH complement(2379514..2380719) Yersinia pseudotuberculosis IP 32953 2956979 YP_070540.1 CDS rimJ NC_006155.1 2381013 2381597 D similar to Yersinia pestis YPO2041 rimJ; ribosomal-protein-alanine acetyltransferase (100% evalue=1.E-114); Salmonella typhimurium STM1167 rimJ; acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 (77.3% evalue=2.E-88); ribosomal-protein-S5-alanine N-acetyltransferase 2381013..2381597 Yersinia pseudotuberculosis IP 32953 2956457 YP_070541.1 CDS YPTB2024 NC_006155.1 2381605 2382306 D similar to Yersinia pestis YPO2042 oxidoreductase (100% evalue=1.E-128); Escherichia coli JW1054 yceH; Hypothetical protein (60.8% evalue=2.E-69); hypothetical protein 2381605..2382306 Yersinia pseudotuberculosis IP 32953 2954044 YP_070542.1 CDS YPTB2025 NC_006155.1 2382317 2383228 D similar to Yersinia pestis YPO2042 oxidoreductase (99.6% evalue=1.E-173); Escherichia coli b1068 mviM; virulence factor mviM homolog (63% evalue=1.E-108); oxidoreductase 2382317..2383228 Yersinia pseudotuberculosis IP 32953 2954045 YP_070543.1 CDS mviN NC_006155.1 2383495 2385030 D similar to Yersinia pestis YPO2043 mviN; membrane protein (99.8% evalue=0); Escherichia coli JW1056 mviN; Virulence factor MviN homolog (85.2% evalue=0); virulence factor MviN 2383495..2385030 Yersinia pseudotuberculosis IP 32953 2956112 YP_070544.1 CDS HlyB NC_006155.1 2385477 2387138 D similar to Yersinia pestis YPO3720 shlB, hpmB; hemolysin activator protein (41.3% evalue=1.E-129); hemolysin activator protein HlyB 2385477..2387138 Yersinia pseudotuberculosis IP 32953 2955803 YP_070545.1 CDS HlyA NC_006155.1 2387168 2392063 D similar to Yersinia pestis YPO3721 hemolysin (30.4% evalue=0); hemolysin HlyA 2387168..2392063 Yersinia pseudotuberculosis IP 32953 2955802 YP_070546.1 CDS argS NC_006155.1 2392130 2393860 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2392130..2393860) Yersinia pseudotuberculosis IP 32953 2955220 YP_070547.1 CDS YPTB2030 NC_006155.1 2394413 2394988 D similar to Yersinia pestis YPO2047 conserved hypothetical protein (99.4% evalue=1.E-111); Escherichia coli b1875 yecM; hypothetical 21.4 kD protein in cutC-argS intergenic region (58.2% evalue=2.E-58); hypothetical protein 2394413..2394988 Yersinia pseudotuberculosis IP 32953 2954046 YP_070548.1 CDS cutC NC_006155.1 2395220 2395984 D similar to Yersinia pestis YPO2048 cutC; copper homeostasis protein (99.6% evalue=1.E-143); Escherichia coli JW1863 cutC; Copper homeostasis protein (56.5% evalue=3.E-78); copper homeostasis protein CutC 2395220..2395984 Yersinia pseudotuberculosis IP 32953 2955379 YP_070549.1 CDS YPTB2032 NC_006155.1 2396177 2397148 R similar to Yersinia pestis YPO2049 conserved hypothetical protein (99.3% evalue=0); Salmonella typhi STY2114 conserved hypothetical protein (78.9% evalue=1.E-151); hypothetical protein complement(2396177..2397148) Yersinia pseudotuberculosis IP 32953 2954047 YP_070550.1 CDS YPTB2033 NC_006155.1 2397145 2397948 R similar to Yersinia pestis YPO2050 conserved hypothetical protein (100% evalue=1.E-152); Salmonella typhimurium STM1905 yecO; SAM-dependent methyltransferases (85.1% evalue=1.E-118); hypothetical protein complement(2397145..2397948) Yersinia pseudotuberculosis IP 32953 2954048 YP_070551.1 CDS YPTB2034 NC_006155.1 2398139 2398534 R similar to Yersinia pestis YPO2051 membrane protein (100% evalue=5.E-71); Escherichia coli ECs2579 hypothetical protein (70.5% evalue=1.E-53); hypothetical protein complement(2398139..2398534) Yersinia pseudotuberculosis IP 32953 2954049 YP_070552.1 CDS YPTB2035 NC_006155.1 2398714 2399529 R similar to Yersinia pestis YPO2052 conserved hypothetical protein (99.2% evalue=1.E-163); Salmonella typhi STY2111 yecE; conserved hypothetical protein (62.3% evalue=1.E-100); hypothetical protein complement(2398714..2399529) Yersinia pseudotuberculosis IP 32953 2954050 YP_070553.1 CDS aspS NC_006155.1 2400515 2402311 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2400515..2402311 Yersinia pseudotuberculosis IP 32953 2955249 YP_070554.1 CDS ntpA NC_006155.1 2402311 2402754 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2402311..2402754 Yersinia pseudotuberculosis IP 32953 2956165 YP_070555.1 CDS YPTB2038 NC_006155.1 2402812 2403555 D similar to Yersinia pestis YPO2055 conserved hypothetical protein (100% evalue=1.E-137); Salmonella typhimurium STM1899 yebC; cytoplasmic protein (85% evalue=1.E-120); hypothetical protein 2402812..2403555 Yersinia pseudotuberculosis IP 32953 2954051 YP_070556.1 CDS ruvC NC_006155.1 2403764 2404285 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2403764..2404285 Yersinia pseudotuberculosis IP 32953 2956564 YP_070557.2 CDS ruvA NC_006155.1 2404592 2405206 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2404592..2405206 Yersinia pseudotuberculosis IP 32953 2956562 YP_070558.1 CDS ruvB NC_006155.1 2405368 2406372 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2405368..2406372 Yersinia pseudotuberculosis IP 32953 2956563 YP_070559.1 CDS znuB NC_006155.1 2406427 2407212 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein complement(2406427..2407212) Yersinia pseudotuberculosis IP 32953 2957127 YP_070560.2 CDS znuC NC_006155.1 2407209 2407967 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase complement(2407209..2407967) Yersinia pseudotuberculosis IP 32953 2957128 YP_070561.1 CDS znuA NC_006155.1 2408043 2408999 D involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 2408043..2408999 Yersinia pseudotuberculosis IP 32953 2957126 YP_070562.1 CDS YPTB2045 NC_006155.1 2409020 2410336 D similar to Yersinia pestis YPO2062 M23/M37 peptidase-family protein (100% evalue=0); Salmonella typhimurium STM1890 yebA; Peptidase (74.7% evalue=0); hypothetical protein 2409020..2410336 Yersinia pseudotuberculosis IP 32953 2954052 YP_070563.1 CDS msbB NC_006155.1 2410603 2411565 D Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2410603..2411565 Yersinia pseudotuberculosis IP 32953 2956084 YP_070564.1 CDS pykA NC_006155.1 2411905 2413347 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2411905..2413347) Yersinia pseudotuberculosis IP 32953 2956382 YP_070565.1 CDS hexR NC_006155.1 2413709 2414578 R Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR complement(2413709..2414578) Yersinia pseudotuberculosis IP 32953 2955785 YP_070566.2 CDS zwf NC_006155.1 2414940 2416415 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2414940..2416415 Yersinia pseudotuberculosis IP 32953 2957129 YP_070567.1 CDS eda NC_006155.1 2416657 2417298 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2416657..2417298 Yersinia pseudotuberculosis IP 32953 2955495 YP_070568.1 CDS YPTB2051 NC_006155.1 2417992 2418456 D similar to Yersinia pestis YPO2068 integral membrane protein (98% evalue=2.E-81); Salmonella typhi STY1585 conserved membrane protein (66.6% evalue=2.E-35); DMT superfamily drug efflux pump 2417992..2418456 Yersinia pseudotuberculosis IP 32953 2954053 YP_070569.1 CDS YPTB2052 NC_006155.1 2418443 2418772 D with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtI 2418443..2418772 Yersinia pseudotuberculosis IP 32953 2954054 YP_070570.1 CDS YPTB2053 NC_006155.1 2418938 2419282 R similar to Yersinia pestis YPO2070 conserved hypothetical protein (100% evalue=5.E-61); Escherichia coli ECs2518 hypothetical protein (72.8% evalue=5.E-43); hypothetical protein complement(2418938..2419282) Yersinia pseudotuberculosis IP 32953 2954055 YP_070571.1 CDS YPTB2054 NC_006155.1 2419413 2421317 D similar to Yersinia pestis YPO2071 DEAD box family helicase (99.6% evalue=0); Escherichia coli ECs2517 enzyme (79.9% evalue=0); DEAD/DEAH box helicase 2419413..2421317 Yersinia pseudotuberculosis IP 32953 2954056 YP_070572.1 CDS YPTB2055 NC_006155.1 2421389 2422087 D similar to Yersinia pestis YPO2072 conserved hypothetical protein (99.5% evalue=1.E-130); Salmonella typhimurium STM1820 yeaZ; molecular chaperone (74.6% evalue=3.E-95); hypothetical protein 2421389..2422087 Yersinia pseudotuberculosis IP 32953 2954057 YP_070573.1 CDS YPTB2056 NC_006155.1 2422224 2422829 D similar to Yersinia pestis YPO2073 lipoprotein (100% evalue=1.E-115); Escherichia coli ECs2515 outer membrane protein (63.7% evalue=5.E-63); lipoprotein 2422224..2422829 Yersinia pseudotuberculosis IP 32953 2954058 YP_070574.1 CDS fadD NC_006155.1 2423483 2425171 D Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2423483..2425171 Yersinia pseudotuberculosis IP 32953 2955523 YP_070575.1 CDS rnd NC_006155.1 2425331 2426452 D similar to Yersinia pestis YPO2075 rnd; ribonuclease D (99.7% evalue=0); Escherichia coli JW1793 rnd; ribonuclease D (67.8% evalue=1.E-148); ribonuclease D 2425331..2426452 Yersinia pseudotuberculosis IP 32953 2956468 YP_070576.1 CDS minE NC_006155.1 2426689 2426958 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(2426689..2426958) Yersinia pseudotuberculosis IP 32953 2956046 YP_070577.1 CDS minD NC_006155.1 2426962 2427774 R ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD complement(2426962..2427774) Yersinia pseudotuberculosis IP 32953 2956045 YP_070578.1 CDS minC NC_006155.1 2427799 2428485 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(2427799..2428485) Yersinia pseudotuberculosis IP 32953 2956044 YP_070579.1 CDS YPTB2062 NC_006155.1 2429206 2429478 D similar to Yersinia pestis YPO2080 conserved hypothetical protein (100% evalue=5.E-46); Escherichia coli Z1941 ycgL; orf, hypothetical protein (71.7% evalue=5.E-31); hypothetical protein 2429206..2429478 Yersinia pseudotuberculosis IP 32953 2954059 YP_070580.1 CDS YPTB2063 NC_006155.1 2429619 2430704 D similar to Yersinia pestis YPO2081 lipoprotein (99.7% evalue=0); Vibrio cholerae VC1956 lytic murein transglycosylase, (48.6% evalue=4.E-83); lipoprotein 2429619..2430704 Yersinia pseudotuberculosis IP 32953 2954060 YP_070581.1 CDS YPTB2064 NC_006155.1 2430775 2431431 D similar to Yersinia pestis YPO2082 fumarylacetoacetate hydrolase family protein (100% evalue=1.E-122); Salmonella typhimurium STM1812 ycgM; Fumarylacetoacetate (FAA) hydrolase family (72.6% evalue=6.E-92); hypothetical protein 2430775..2431431 Yersinia pseudotuberculosis IP 32953 2954061 YP_070582.1 CDS YPTB2065 NC_006155.1 2431534 2431980 D similar to Yersinia pestis YPO2083 conserved hypothetical protein (100% evalue=1.E-88); Escherichia coli b1181 ycgN; hypothetical 18.6 kD protein in minC-shea intergenic region (85.1% evalue=2.E-75); hypothetical protein 2431534..2431980 Yersinia pseudotuberculosis IP 32953 2954062 YP_070583.1 CDS YPTB2066 NC_006155.1 2432081 2433253 R similar to Yersinia pestis YPO2137 conserved hypothetical phage protein (99.7% evalue=0); Staphylococcus aureus_N315 SA2061 hypothetical protein (21.4% evalue=7.E-09); hypothetical protein complement(2432081..2433253) Yersinia pseudotuberculosis IP 32953 2954063 YP_070584.1 CDS YPTB2067 NC_006155.1 2433257 2434456 R similar to Yersinia pestis YPO2138 aminotransferase (98.7% evalue=0); Salmonella typhimurium STM2543 nifS; aminotransferase class-V (50.7% evalue=1.E-101); aminotransferase complement(2433257..2434456) Yersinia pseudotuberculosis IP 32953 2954064 YP_070585.1 CDS YPTB2068 NC_006155.1 2434473 2435213 R similar to Yersinia pestis YPO2139 hypothetical phage protein (100% evalue=1.E-136); hypothetical protein complement(2434473..2435213) Yersinia pseudotuberculosis IP 32953 2954065 YP_070586.1 CDS YPTB2069 NC_006155.1 2436305 2436661 D similar to Yersinia pestis YPO2140 hypothetical phage protein (100% evalue=1.E-59); hypothetical protein 2436305..2436661 Yersinia pseudotuberculosis IP 32953 2954066 YP_070587.1 CDS dsbB NC_006155.1 2437078 2437608 R disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B complement(2437078..2437608) Yersinia pseudotuberculosis IP 32953 2955487 YP_070588.1 CDS nhaB NC_006155.1 2437844 2439418 R involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter complement(2437844..2439418) Yersinia pseudotuberculosis IP 32953 2956138 YP_070589.1 CDS fadR NC_006155.1 2439662 2440381 D Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2439662..2440381 Yersinia pseudotuberculosis IP 32953 2955528 YP_070590.1 CDS YPTB2073 NC_006155.1 2440599 2442134 R similar to Yersinia pestis YPO2145 conserved hypothetical protein (99.8% evalue=0); Escherichia coli JW1177 ycgB; Hypothetical protein (84.8% evalue=0); SpoVR family protein complement(2440599..2442134) Yersinia pseudotuberculosis IP 32953 2954067 YP_070591.1 CDS dadA NC_006155.1 2442598 2443902 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2442598..2443902 Yersinia pseudotuberculosis IP 32953 2955422 YP_070592.1 CDS YPTB2075 NC_006155.1 2443931 2445124 R similar to Yersinia pestis YPO2148 multidrug resistance protein (97.6% evalue=0); Vibrio cholerae VC0069 multidrug resistance protein, (36.3% evalue=6.E-59); MFS multidrug efflux antiporter complement(2443931..2445124) Yersinia pseudotuberculosis IP 32953 2954068 YP_070593.1 CDS YPTB2076 NC_006155.1 2445389 2446258 R similar to Yersinia pestis YPO2149 conserved hypothetical protein (99.6% evalue=1.E-170); Salmonella typhimurium STM0951 cytoplasmic protein (68.5% evalue=1.E-118); hypothetical protein complement(2445389..2446258) Yersinia pseudotuberculosis IP 32953 2954069 YP_070594.1 CDS YPTB2077 NC_006155.1 2446456 2447361 D similar to Yersinia pestis YPO2150 LysR-family transcriptional regulatory protein (100% evalue=1.E-169); Salmonella typhimurium STM0952 transcriptional regulator, lysR family (57% evalue=3.E-94); LysR family transcriptional regulator 2446456..2447361 Yersinia pseudotuberculosis IP 32953 2954070 YP_070595.1 CDS YPTB2078 NC_006155.1 2447396 2448514 R similar to Yersinia pestis YPO2151 membrane protein (99.7% evalue=0); Mesorhizobium loti mll2462 hypothetical protein (52.4% evalue=1.E-101); DMT superfamliy Ni++ efflux protein complement(2447396..2448514) Yersinia pseudotuberculosis IP 32953 2954071 YP_070596.1 CDS YPTB2079 NC_006155.1 2448622 2449896 R similar to Yersinia pestis YPO2152 conserved hypothetical protein (100% evalue=0); Escherichia coli JW1773 yeaH; Hypothetical protein (86.6% evalue=0); hypothetical protein complement(2448622..2449896) Yersinia pseudotuberculosis IP 32953 2954072 YP_070597.1 CDS YPTB2080 NC_006155.1 2450046 2451980 R similar to Yersinia pestis YPO2153 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM1285 yeaG; Ser protein kinase (94.8% evalue=0); hypothetical protein complement(2450046..2451980) Yersinia pseudotuberculosis IP 32953 2954073 YP_070598.1 CDS YPTB2081 NC_006155.1 2452403 2453173 D similar to Yersinia pestis YPO2155 exported protein (99.6% evalue=1.E-151); Salmonella typhimurium STM1286 mipA; scaffolding protein for murein-synthesizing holoenzyme (57.8% evalue=2.E-81); hypothetical protein 2452403..2453173 Yersinia pseudotuberculosis IP 32953 2954074 YP_070599.1 CDS YPTB2082 NC_006155.1 2453246 2454121 R similar to Yersinia pestis YPO2156 conserved hypothetical protein (100% evalue=1.E-170); Salmonella typhimurium STM1289 yeaD; enzymes related to aldose 1-epimerase (58.4% evalue=1.E-102); hypothetical protein complement(2453246..2454121) Yersinia pseudotuberculosis IP 32953 2954075 YP_070600.1 CDS gapA NC_006155.1 2454445 2455440 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(2454445..2455440) Yersinia pseudotuberculosis IP 32953 2955676 YP_070601.1 CDS YPTB2084 NC_006155.1 2455788 2456201 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2455788..2456201 Yersinia pseudotuberculosis IP 32953 2954076 YP_070602.1 CDS YPTB2085 NC_006155.1 2456272 2456544 D similar to Yersinia pestis YPO2159 conserved hypothetical protein (100% evalue=1.E-45); Salmonella typhi STY1823 conserved hypothetical protein (73.4% evalue=6.E-29); hypothetical protein 2456272..2456544 Yersinia pseudotuberculosis IP 32953 2954077 YP_070603.1 CDS pncA NC_006155.1 2456678 2457325 R catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase complement(2456678..2457325) Yersinia pseudotuberculosis IP 32953 2956288 YP_070604.1 CDS ansA NC_006155.1 2457340 2458356 R converts asparagine to aspartate and ammonia; asparaginase complement(2457340..2458356) Yersinia pseudotuberculosis IP 32953 2955195 YP_070605.1 CDS sppA NC_006155.1 2458473 2460323 R SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 complement(2458473..2460323) Yersinia pseudotuberculosis IP 32953 2956630 YP_070606.1 CDS YPTB2089 NC_006155.1 2460486 2461037 D similar to Yersinia pestis YPO2163 nitroreductase (100% evalue=1.E-103); Salmonella typhimurium STM1296 ydjA; oxidoreductase (66.1% evalue=2.E-65); hypothetical protein 2460486..2461037 Yersinia pseudotuberculosis IP 32953 2954078 YP_070607.1 CDS selD NC_006155.1 2461262 2462308 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 2461262..2462308 Yersinia pseudotuberculosis IP 32953 2956591 YP_070608.1 CDS topB NC_006155.1 2462367 2464295 D decatenates replicating daughter chromosomes; DNA topoisomerase III 2462367..2464295 Yersinia pseudotuberculosis IP 32953 2956725 YP_070609.1 CDS YPTB2092 NC_006155.1 2464292 2464582 D similar to Yersinia pestis YPO2166 exported protein (100% evalue=6.E-52); Salmonella typhi STY1814 exported protein (45.2% evalue=3.E-18); hypothetical protein 2464292..2464582 Yersinia pseudotuberculosis IP 32953 2954079 YP_070610.1 CDS nudG NC_006155.1 2464595 2464981 R similar to Yersinia pestis YPO2167 nudG; pyrophosphohydrolase (100% evalue=1.E-70); Escherichia coli JW1748 hypothetical protein (65.3% evalue=4.E-40); pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase complement(2464595..2464981) Yersinia pseudotuberculosis IP 32953 2956166 YP_070611.1 CDS xthA NC_006155.1 2465079 2465885 R removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III complement(2465079..2465885) Yersinia pseudotuberculosis IP 32953 2956911 YP_070612.1 CDS YPTB2095 NC_006155.1 2466695 2467555 D similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (25.5% evalue=2.E-11); LysR family transcriptional regulator 2466695..2467555 Yersinia pseudotuberculosis IP 32953 2954080 YP_070613.1 CDS YPTB2096 NC_006155.1 2467797 2469005 D similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 2467797..2469005 Yersinia pseudotuberculosis IP 32953 2954081 YP_070614.1 CDS purU NC_006155.1 2469767 2470615 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(2469767..2470615) Yersinia pseudotuberculosis IP 32953 2956379 YP_070615.1 CDS YPTB2098 NC_006155.1 2470699 2471163 R similar to Yersinia pestis YPO2172 conserved hypothetical protein (98.7% evalue=2.E-92); Escherichia coli Z2009 ychJ; orf, hypothetical protein (53.2% evalue=2.E-43); hypothetical protein complement(2470699..2471163) Yersinia pseudotuberculosis IP 32953 2954082 YP_070616.1 CDS YPTB2099 NC_006155.1 2472497 2473513 D similar to Yersinia pestis YPO2173 probable response regulator (99.7% evalue=0); Escherichia coli Z2011 hnr; Hnr protein (64.6% evalue=1.E-126); response regulator of RpoS 2472497..2473513 Yersinia pseudotuberculosis IP 32953 2954083 YP_070617.1 CDS YPTB2100 NC_006155.1 2473820 2475166 D similar to Yersinia pestis YPO2174 nucleotide sugar dehydrogenase (100% evalue=0); Mesorhizobium loti mlr5265 UDP-glucose dehydrogenase (66.7% evalue=1.E-169); nucleotide sugar dehydrogenase 2473820..2475166 Yersinia pseudotuberculosis IP 32953 2954084 YP_070618.1 CDS hns NC_006155.1 2475601 2476008 R similar to Yersinia pestis YPO2175 hns, hnsA, drdX, osmZ, bglY, msyA, cur, pilG, topS; DNA-binding protein Hns (97.7% evalue=7.E-67); Salmonella typhi STY1299 hns; DNA-binding protein (histone-like protein Hlp-II) (86.6% evalue=6.E-61); global DNA-binding transcriptional dual regulator H-NS complement(2475601..2476008) Yersinia pseudotuberculosis IP 32953 2955815 YP_070619.1 CDS tdk NC_006155.1 2476758 2477348 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2476758..2477348 Yersinia pseudotuberculosis IP 32953 2956674 YP_070620.1 CDS adhE NC_006155.1 2478099 2480774 R similar to Yersinia pestis YPO2180 adhE, ana; aldehyde-alcohol dehydrogenase (100% evalue=0); Escherichia coli JW1228 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase (90.6% evalue=0); bifunctional acetaldehyde-CoA/alcohol dehydrogenase complement(2478099..2480774) Yersinia pseudotuberculosis IP 32953 2955174 YP_070621.1 CDS YPTB2104 NC_006155.1 2481630 2482274 D similar to Yersinia pestis YPO2181 membrane protein (99% evalue=1.E-114); Salmonella typhimurium STM1748 ychE; integral membrane proteins of the MarC family (84.4% evalue=9.E-96); hypothetical protein 2481630..2482274 Yersinia pseudotuberculosis IP 32953 2954085 YP_070622.1 CDS oppA NC_006155.1 2483112 2484749 D similar to Yersinia pestis YPO2182 oppA; periplasmic oligopeptide-binding protein precursor (100% evalue=0); Salmonella typhimurium STM1746 oppA; ABC superfamily (periplasm), oligopeptide transport protein with chaperone properties (78.4% evalue=0); oligopeptide-ABC transporter substrate-binding protein oppA 2483112..2484749 Yersinia pseudotuberculosis IP 32953 2956195 YP_070623.1 CDS oppB NC_006155.1 2484836 2485756 D similar to Yersinia pestis YPO2183 oppB; oligopeptide transport system permease (100% evalue=1.E-171); Escherichia coli ECs1744 oligopeptide transport permease (92.4% evalue=1.E-158); oligopeptide transporter permease 2484836..2485756 Yersinia pseudotuberculosis IP 32953 2956196 YP_070624.1 CDS oppC NC_006155.1 2485775 2486680 D similar to Yersinia pestis YPO2184 oppC; oligopeptide transport system permease (100% evalue=1.E-166); Escherichia coli ECs1745 oligopeptide transport system permease OppC (92.3% evalue=1.E-156); oligopeptide ABC transporter permease OppC 2485775..2486680 Yersinia pseudotuberculosis IP 32953 2956197 YP_070625.1 CDS oppD NC_006155.1 2486692 2487693 D similar to Yersinia pestis YPO2185 oppD; oligopeptide transport ATP-binding protein (100% evalue=0); Escherichia coli ECs1746 oligopeptide ABC transport system ATP-binding protein OppD (87.6% evalue=1.E-162); oligopeptide ABC transporter ATP-binding protein 2486692..2487693 Yersinia pseudotuberculosis IP 32953 2956198 YP_070626.1 CDS oppF NC_006155.1 2487690 2488691 D similar to Yersinia pestis YPO2186 oppF; oligopeptide transport ATP-binding protein (100% evalue=0); Escherichia coli ECs1747 oligopeptide ABC transport system ATP-binding protein OppF (90.7% evalue=1.E-175); oligopeptide ABC transporter ATP-binding protein OppF 2487690..2488691 Yersinia pseudotuberculosis IP 32953 2956199 YP_070627.1 CDS YPTB2110 NC_006155.1 2489775 2490098 R highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein complement(2489775..2490098) Yersinia pseudotuberculosis IP 32953 2954086 YP_070628.1 CDS cls NC_006155.1 2490263 2491723 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(2490263..2491723) Yersinia pseudotuberculosis IP 32953 2955341 YP_070629.1 CDS YPTB2112 NC_006155.1 2491792 2492040 R similar to Yersinia pestis YPO2189 hypothetical protein, 100% identical; hypothetical protein complement(2491792..2492040) Yersinia pseudotuberculosis IP 32953 2954087 YP_070630.1 CDS YPTB2113 NC_006155.1 2492783 2493322 D similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (44.9% evalue=9.E-39); attachment invasion locus protein 2492783..2493322 Yersinia pseudotuberculosis IP 32953 2954088 YP_070631.1 CDS YPTB2114 NC_006155.1 2493542 2493805 D similar to Yersinia pestis YPO2191 hypothetical protein (100% evalue=8.E-47); hypothetical protein 2493542..2493805 Yersinia pseudotuberculosis IP 32953 2954089 YP_070632.1 CDS YPTB2115 NC_006155.1 2493836 2494165 R similar to Mesorhizobium loti msl7161 hypothetical protein (53.4% evalue=2.E-13); C. jejuni Cj1164c hypothetical protein Cj1164c (49.4% evalue=9.E-16); hypothetical protein complement(2493836..2494165) Yersinia pseudotuberculosis IP 32953 2954090 YP_070633.1 CDS YPTB2116 NC_006155.1 2494403 2494699 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein complement(2494403..2494699) Yersinia pseudotuberculosis IP 32953 2954091 YP_070634.1 CDS tonB NC_006155.1 2495000 2495746 D membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transporter 2495000..2495746 Yersinia pseudotuberculosis IP 32953 2956723 YP_070635.1 CDS YPTB2118 NC_006155.1 2495815 2496264 R YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase complement(2495815..2496264) Yersinia pseudotuberculosis IP 32953 2954092 YP_070636.1 CDS ispZ NC_006155.1 2496344 2496886 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(2496344..2496886) Yersinia pseudotuberculosis IP 32953 2955902 YP_070637.1 CDS YPTB2120 NC_006155.1 2497117 2498856 D similar to Vibrio cholerae VCA0103 sulfate permease family protein (57.4% evalue=1.E-180); Pseudomonas aeruginosa PA1647 probable sulfate transporter (42.6% evalue=1.E-114); sulfate permease family protein 2497117..2498856 Yersinia pseudotuberculosis IP 32953 2954093 YP_070638.1 CDS YPTB2121 NC_006155.1 2498977 2499747 R similar to Yersinia pestis YPO2199 membrane protein (100% evalue=1.E-131); Salmonella typhimurium STM1734 yciC; inner membrane protein (50.6% evalue=1.E-68); hypothetical protein complement(2498977..2499747) Yersinia pseudotuberculosis IP 32953 2954094 YP_070639.1 CDS YPTB2122 NC_006155.1 2499909 2500124 D similar to Yersinia pestis YPO2200 hypothetical protein, 100% identical; hypothetical protein 2499909..2500124 Yersinia pseudotuberculosis IP 32953 2954095 YP_070640.1 CDS ompW NC_006155.1 2500233 2500868 D receptor for colicin S4; outer membrane protein W 2500233..2500868 Yersinia pseudotuberculosis IP 32953 2956192 YP_070641.1 CDS YPTB2124 NC_006155.1 2501015 2501329 R similar to Yersinia pestis YPO2202 lipoprotein (100% evalue=1.E-51); lipoprotein complement(2501015..2501329) Yersinia pseudotuberculosis IP 32953 2954096 YP_070642.1 CDS trpA NC_006155.1 2501672 2502478 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2501672..2502478) Yersinia pseudotuberculosis IP 32953 2956825 YP_070643.1 CDS trpB NC_006155.1 2502478 2503668 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2502478..2503668) Yersinia pseudotuberculosis IP 32953 2956826 YP_070644.1 CDS trpC NC_006155.1 2503803 2505230 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(2503803..2505230) Yersinia pseudotuberculosis IP 32953 2956827 YP_070645.1 CDS trpD NC_006155.1 2505234 2506232 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(2505234..2506232) Yersinia pseudotuberculosis IP 32953 2956828 YP_070646.1 CDS trpG NC_006155.1 2506247 2506825 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(2506247..2506825) Yersinia pseudotuberculosis IP 32953 2956830 YP_070647.1 CDS trpE NC_006155.1 2506825 2508390 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(2506825..2508390) Yersinia pseudotuberculosis IP 32953 2956829 YP_070649.1 CDS YPTB2132 NC_006155.1 2508597 2508725 R similar to Yersinia pestis YPO2210 hypothetical protein, 98% identical.; hypothetical protein complement(2508597..2508725) Yersinia pseudotuberculosis IP 32953 2954098 YP_070650.1 CDS trpH NC_006155.1 2508842 2509741 D similar to Yersinia pestis YPO2211 trpH; conserved hypothetical protein (100% evalue=1.E-173); Escherichia coli ECs1838 enzymes (72.9% evalue=1.E-113); hypothetical protein 2508842..2509741 Yersinia pseudotuberculosis IP 32953 2956831 YP_070651.1 CDS YPTB2134 NC_006155.1 2509758 2510378 D similar to Yersinia pestis YPO2212 conserved hypothetical protein (100% evalue=1.E-117); Salmonella typhi STY1330 conserved hypothetical protein (82.4% evalue=1.E-97); hypothetical protein 2509758..2510378 Yersinia pseudotuberculosis IP 32953 2954099 YP_070652.1 CDS YPTB2135 NC_006155.1 2510708 2511742 D catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2510708..2511742 Yersinia pseudotuberculosis IP 32953 2954100 YP_070653.1 CDS btuR NC_006155.1 2511865 2512455 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(2511865..2512455) Yersinia pseudotuberculosis IP 32953 2955301 YP_070654.1 CDS YPTB2137 NC_006155.1 2512472 2513233 R similar to Yersinia pestis YPO2215 short chain dehydrogenase (100% evalue=1.E-140); Salmonella typhi STY1333 hypothetical oxidoreductase (75% evalue=1.E-105); short chain dehydrogenase complement(2512472..2513233) Yersinia pseudotuberculosis IP 32953 2954101 YP_070655.1 CDS sohB NC_006155.1 2513405 2514451 D SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2513405..2514451 Yersinia pseudotuberculosis IP 32953 2956621 YP_070656.1 CDS YPTB2139 NC_006155.1 2514570 2514821 R similar to Yersinia pestis YPO2217 conserved hypothetical protein (100% evalue=4.E-43); Escherichia coli ECs1845 hypothetical protein (68.6% evalue=5.E-27); hypothetical protein complement(2514570..2514821) Yersinia pseudotuberculosis IP 32953 2954102 YP_070657.1 CDS topA NC_006155.1 2515240 2517855 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2515240..2517855 Yersinia pseudotuberculosis IP 32953 2956724 YP_070658.1 CDS cysB NC_006155.1 2518252 2519226 D LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2518252..2519226 Yersinia pseudotuberculosis IP 32953 2955399 YP_070659.1 CDS YPTB2142 NC_006155.1 2519562 2520419 D similar to Yersinia pestis YPO2220 hypothetical protein (99.2% evalue=1.E-165); hypothetical protein 2519562..2520419 Yersinia pseudotuberculosis IP 32953 2954103 YP_070660.1 CDS acnA NC_006155.1 2520783 2523455 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2520783..2523455 Yersinia pseudotuberculosis IP 32953 2955165 YP_070661.1 CDS ribA NC_006155.1 2523619 2524209 R catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II complement(2523619..2524209) Yersinia pseudotuberculosis IP 32953 2956450 YP_070662.1 CDS pgpB NC_006155.1 2524715 2525476 D similar to Yersinia pestis YPO2223 pgpB; phosphatidylglycerophosphatase B (100% evalue=1.E-149); Salmonella typhimurium STM1710 pgpB; phosphatidylglycerophosphatase B (58.1% evalue=4.E-86); phosphatidylglycerophosphatase B 2524715..2525476 Yersinia pseudotuberculosis IP 32953 2956245 YP_070663.1 CDS YPTB2146 NC_006155.1 2525657 2525968 D similar to Yersinia pestis YPO2224 membrane protein (99% evalue=3.E-50); Escherichia coli JW1271 yciS, yciM; Hypothetical protein (67.6% evalue=9.E-34); hypothetical protein 2525657..2525968 Yersinia pseudotuberculosis IP 32953 2954104 YP_070664.1 CDS YPTB2147 NC_006155.1 2525975 2527144 D similar to Yersinia pestis YPO2225 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM1708 yciM; N-acetylglucosaminyl transferase (78.9% evalue=0); hypothetical protein 2525975..2527144 Yersinia pseudotuberculosis IP 32953 2954105 YP_070665.1 CDS YPTB2148 NC_006155.1 2527266 2527568 R similar to Yersinia pestis YPO2226 hypothetical protein (100% evalue=1.E-48); hypothetical protein complement(2527266..2527568) Yersinia pseudotuberculosis IP 32953 2954106 YP_070666.1 CDS pyrF NC_006155.1 2528035 2528772 D OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2528035..2528772 Yersinia pseudotuberculosis IP 32953 2956388 YP_070667.1 CDS YPTB2150 NC_006155.1 2528772 2529098 D involved in start site selection during the initiation of translation; translation initiation factor Sui1 2528772..2529098 Yersinia pseudotuberculosis IP 32953 2954107 YP_070668.1 CDS osmB NC_006155.1 2529354 2529569 R similar to Yersinia pestis YPO2229 osmB; osmotically inducible lipoprotein B precursor (100% evalue=9.E-33); Salmonella typhi STY1346 osmB; osmotically inducible lipoprotein B precursor (79.1% evalue=2.E-25); lipoprotein complement(2529354..2529569) Yersinia pseudotuberculosis IP 32953 2956200 YP_070669.1 CDS araD NC_006155.1 2530049 2530744 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2530049..2530744 Yersinia pseudotuberculosis IP 32953 2955206 YP_070670.1 CDS YPTB2153 NC_006155.1 2530773 2531021 R similar to Yersinia pestis YPO2231 hypothetical protein (100% evalue=6.E-42); Caulobacter crescentus CC0773 hypothetical protein (39.5% evalue=2.E-12); hypothetical protein complement(2530773..2531021) Yersinia pseudotuberculosis IP 32953 2954108 YP_070671.1 CDS mipB NC_006155.1 2531355 2532020 D similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 2531355..2532020 Yersinia pseudotuberculosis IP 32953 2956047 YP_070672.1 CDS YPTB2155 NC_006155.1 2532137 2532442 R similar to Yersinia pestis YPO2233 conserved hypothetical protein (99% evalue=2.E-57); Escherichia coli JW0591 ybdD; Hypothetical protein (ORF2) (54% evalue=2.E-09); hypothetical protein complement(2532137..2532442) Yersinia pseudotuberculosis IP 32953 2954109 YP_070673.1 CDS cstA NC_006155.1 2532435 2534501 R similar to Yersinia pestis YPO2234 cstA; carbon starvation protein A (99.7% evalue=0); Ralstonia solanacearum RS01844 cstA, RSc0022; probable carbon starvation A transmembrane protein (64.4% evalue=0); carbon starvation protein A complement(2532435..2534501) Yersinia pseudotuberculosis IP 32953 2955377 YP_070674.1 CDS rnb NC_006155.1 2534851 2536785 R Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II complement(2534851..2536785) Yersinia pseudotuberculosis IP 32953 2956466 YP_070675.1 CDS YPTB2158 NC_006155.1 2537434 2538744 D similar to Yersinia pestis YPO2237 integral membrane protein (99.7% evalue=0); Ralstonia solanacearum RS01194 probable permease transmembrane protein (60.2% evalue=1.E-155); major facilitator superfamily tartrate transporter 2537434..2538744 Yersinia pseudotuberculosis IP 32953 2954110 YP_070676.1 CDS YPTB2159 NC_006155.1 2538824 2539822 D similar to Yersinia pestis YPO2238 conserved hypothetical protein (99.3% evalue=0); Brucella melitensis BMEII1094 4-hydroxybutyrate dehydrogenase (48.8% evalue=2.E-80); hypothetical protein 2538824..2539822 Yersinia pseudotuberculosis IP 32953 2954111 YP_070677.1 CDS nth NC_006155.1 2539989 2540630 R DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; endonuclease III complement(2539989..2540630) Yersinia pseudotuberculosis IP 32953 2956162 YP_070678.1 CDS YPTB2161 NC_006155.1 2540627 2541328 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE complement(2540627..2541328) Yersinia pseudotuberculosis IP 32953 2954112 YP_070679.1 CDS YPTB2162 NC_006155.1 2541325 2541954 R part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG complement(2541325..2541954) Yersinia pseudotuberculosis IP 32953 2954113 YP_070680.1 CDS rnfD NC_006155.1 2541964 2543019 R RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD complement(2541964..2543019) Yersinia pseudotuberculosis IP 32953 2954114 YP_070681.1 CDS YPTB2164 NC_006155.1 2543547 2544440 D similar to Yersinia pestis YPO2243 AraC-family transcriptional regulatory protein (99.6% evalue=1.E-170); AraC family transcriptional regulator 2543547..2544440 Yersinia pseudotuberculosis IP 32953 2954115 YP_070682.1 CDS YPTB2165 NC_006155.1 2544545 2546524 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC complement(2544545..2546524) Yersinia pseudotuberculosis IP 32953 2954116 YP_070683.1 CDS YPTB2166 NC_006155.1 2546517 2547140 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB complement(2546517..2547140) Yersinia pseudotuberculosis IP 32953 2954117 YP_070684.1 CDS YPTB2167 NC_006155.1 2547140 2547721 R similar to Yersinia pestis YPO2246 membrane protein (100% evalue=1.E-102); Escherichia coli JW1619 ydgQ; Hypothetical protein (88.5% evalue=7.E-93); Na(+)-translocating NADH-quinone reductase subunit E complement(2547140..2547721) Yersinia pseudotuberculosis IP 32953 2954118 YP_070685.1 CDS YPTB2168 NC_006155.1 2547849 2548292 R similar to Yersinia pestis YPO2247 membrane protein (100% evalue=3.E-80); Salmonella typhimurium STM1460 ydgK; inner membrane protein (56.2% evalue=2.E-37); hypothetical protein complement(2547849..2548292) Yersinia pseudotuberculosis IP 32953 2954119 YP_070686.1 CDS YPTB2169 NC_006155.1 2548767 2550914 D similar to Xylella fastidiosa XF2397 toxin secretion ABC transporter ATP-binding protein (44.7% evalue=1.E-155); Vibrio cholerae VC1448 RTX toxin transporter (49.6% evalue=0); toxin ABC transporter ATP-binding/permease 2548767..2550914 Yersinia pseudotuberculosis IP 32953 2954120 YP_070687.1 CDS YPTB2170 NC_006155.1 2550979 2552349 D similar to Xylella fastidiosa XF2398 hemolysin secretion protein D (39.2% evalue=2.E-80); Vibrio cholerae VC1447 RTX toxin transporter (39.3% evalue=2.E-85); RTX toxin ABC transporter 2550979..2552349 Yersinia pseudotuberculosis IP 32953 2954121 YP_070688.1 CDS YPTB2171 NC_006155.1 2552351 2554489 D similar to Yersinia pestis YPO2252 toxin transport protein (99.4% evalue=0); Vibrio cholerae VC1446 toxin secretion transporter, (52.2% evalue=0); toxin ABC transporter ATP-binding/permease 2552351..2554489 Yersinia pseudotuberculosis IP 32953 2954122 YP_070689.1 CDS araA NC_006155.1 2554731 2556233 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(2554731..2556233) Yersinia pseudotuberculosis IP 32953 2955202 YP_070690.1 CDS araB NC_006155.1 2556317 2558020 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(2556317..2558020) Yersinia pseudotuberculosis IP 32953 2955203 YP_070691.1 CDS araF NC_006155.1 2558427 2559410 D similar to Yersinia pestis YPO2255 araF; L-arabinose-binding periplasmic protein precursor (99.6% evalue=0); Escherichia coli b1901 araF; L-arabinose transport system substrate-binding protein (87.4% evalue=1.E-163); L-arabinose-ABC transporter substrate-binding protein araF 2558427..2559410 Yersinia pseudotuberculosis IP 32953 2955207 YP_070692.2 CDS araG NC_006155.1 2559508 2561079 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2559508..2561079 Yersinia pseudotuberculosis IP 32953 2955208 YP_070693.1 CDS araH NC_006155.1 2561097 2562146 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2561097..2562146 Yersinia pseudotuberculosis IP 32953 2955209 YP_070694.1 CDS araC NC_006155.1 2562367 2563299 D positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 2562367..2563299 Yersinia pseudotuberculosis IP 32953 2955204 YP_070695.1 CDS YPTB2178 NC_006155.1 2563427 2564476 D similar to Yersinia pestis YPO2259 oxidoreductase (100% evalue=0); Salmonella typhi STY1660 oxidoreductase (72.5% evalue=1.E-147); oxidoreductase 2563427..2564476 Yersinia pseudotuberculosis IP 32953 2954123 YP_070696.1 CDS YPTB2179 NC_006155.1 2564670 2565698 D similar to Yersinia pestis YPO2260 membrane protein (99.4% evalue=0); Escherichia coli Z3675 yfeH; cytochrome oxidase (65% evalue=1.E-112); hypothetical protein 2564670..2565698 Yersinia pseudotuberculosis IP 32953 2954124 YP_070697.1 CDS add NC_006155.1 2565873 2566877 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(2565873..2566877) Yersinia pseudotuberculosis IP 32953 2955173 YP_070698.1 CDS YPTB2181 NC_006155.1 2567266 2568522 D hypothetical protein 2567266..2568522 Yersinia pseudotuberculosis IP 32953 2954125 YP_070699.1 CDS YPTB2182 NC_006155.1 2568695 2569624 R similar to Pasteurella multocida PM0373 unknown (54.9% evalue=4.E-86); Listeria monocytogenes lmo0737 lmo0737 (34.1% evalue=8.E-36); hypothetical protein complement(2568695..2569624) Yersinia pseudotuberculosis IP 32953 2954126 YP_070700.1 CDS YPTB2183 NC_006155.1 2569923 2570747 D similar to Pseudomonas aeruginosa PA3757 probable transcriptional regulator (38.3% evalue=3.E-34); D. radiodurans DRA0211 transcriptional regulator, GntR family (34.9% evalue=1.E-28); transcriptional regulator 2569923..2570747 Yersinia pseudotuberculosis IP 32953 2954127 YP_070701.1 CDS YPTB2184 NC_006155.1 2571015 2572559 R similar to Yersinia pestis YPO2262 exported protein (99.8% evalue=0); Salmonella typhimurium STM1466 ydgA; periplasmic protein (43.2% evalue=1.E-111); hypothetical protein complement(2571015..2572559) Yersinia pseudotuberculosis IP 32953 2954128 YP_070702.1 CDS manA NC_006155.1 2572799 2573974 R similar to Yersinia pestis YPO2263 manA, pmi; mannose-6-phosphate isomerase (99.2% evalue=0); Escherichia coli ECs2319 mannose-6-phosphate isomerase (71.4% evalue=1.E-156); mannose-6-phosphate isomerase complement(2572799..2573974) Yersinia pseudotuberculosis IP 32953 2955993 YP_070703.1 CDS fumC NC_006155.1 2574258 2575655 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2574258..2575655 Yersinia pseudotuberculosis IP 32953 2955665 YP_070704.1 CDS tus NC_006155.1 2575735 2576670 R binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein complement(2575735..2576670) Yersinia pseudotuberculosis IP 32953 2956844 YP_070705.1 CDS YPTB2188 NC_006155.1 2576875 2578173 R similar to Yersinia pestis YPO2266 membrane protein (99.1% evalue=0); Escherichia coli JW1588 ynfM; Hypothetical transcriptional regulator (69.3% evalue=1.E-160); MFS multidrug efflux pump complement(2576875..2578173) Yersinia pseudotuberculosis IP 32953 2954129 YP_070706.1 CDS ynfL NC_006155.1 2578402 2579316 D similar to Escherichia coli b1595 ynfL; hypothetical transcriptional regulator in MLC-asr intergenic region (59.5% evalue=5.E-92); Escherichia coli JW1587 ynfL; Hypothetical transcriptional regulator (59.5% evalue=5.E-92); hypothetical protein 2578402..2579316 Yersinia pseudotuberculosis IP 32953 2957099 YP_070707.1 CDS mlc NC_006155.1 2579495 2580712 D similar to Yersinia pestis YPO2268 mlc; ROK family transcriptional regulatory protein (99.5% evalue=0); Escherichia coli JW1586 mlc; Grobal represser of PTS system, Making large colonies protein (73.6% evalue=1.E-171); ROK family transcriptional regulatory protein 2579495..2580712 Yersinia pseudotuberculosis IP 32953 2956049 YP_070708.1 CDS bioD NC_006155.1 2580936 2581604 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2580936..2581604 Yersinia pseudotuberculosis IP 32953 2955289 YP_070709.2 CDS YPTB2192 NC_006155.1 2581709 2582953 R similar to Yersinia pestis YPO2270 membrane protein (99.7% evalue=0); Salmonella typhimurium STM1490 chloride channel protein (63.9% evalue=1.E-146); voltage-gated ClC-type chloride channel ClcB complement(2581709..2582953) Yersinia pseudotuberculosis IP 32953 2954130 YP_070710.1 CDS YPTB2193 NC_006155.1 2583135 2583380 R similar to Escherichia coli ECs2292 hypothetical protein (56.7% evalue=2.E-18); Escherichia coli Z2573 hypothetical protein (56.7% evalue=2.E-18); hypothetical protein complement(2583135..2583380) Yersinia pseudotuberculosis IP 32953 2954131 YP_070711.1 CDS YPTB2194 NC_006155.1 2583594 2583968 R similar to Salmonella typhi STY1560 secreted protein (41.5% evalue=4.E-21); Salmonella typhimurium STM1503 ynfB; periplasmic protein (41.5% evalue=4.E-21); hypothetical protein complement(2583594..2583968) Yersinia pseudotuberculosis IP 32953 2954132 YP_070712.1 CDS ydfG NC_006155.1 2584195 2584944 R NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase complement(2584195..2584944) Yersinia pseudotuberculosis IP 32953 2956993 YP_070713.1 CDS YPTB2196 NC_006155.1 2585058 2586860 R similar to Ralstonia solanacearum RS00474 probable transcription regulator protein (36.4% evalue=2.E-82); Pseudomonas aeruginosa PA4021 probable transcriptional regulator (35.2% evalue=1.E-78); transcriptional regulator complement(2585058..2586860) Yersinia pseudotuberculosis IP 32953 2954133 YP_070714.1 CDS YPTB2197 NC_006155.1 2587156 2588676 D similar to Pseudomonas aeruginosa PA4022 probable aldehyde dehydrogenase (79.2% evalue=0); Pseudomonas aeruginosa PA1984 probable aldehyde dehydrogenase (78.6% evalue=0); aldehyde dehydrogenase 2587156..2588676 Yersinia pseudotuberculosis IP 32953 2954134 YP_070715.1 CDS YPTB2198 NC_006155.1 2588957 2590555 R hypothetical protein complement(2588957..2590555) Yersinia pseudotuberculosis IP 32953 2954135 YP_070716.1 CDS YPTB2199 NC_006155.1 2591079 2592002 D similar to Salmonella typhi STY2000 membrane protein (77.5% evalue=1.E-127); Salmonella typhimurium STM1862 pagO; PhoPQ-activated gene; predicted integral membrane protein (76.8% evalue=1.E-126); DMT superfamily metabolite efflux pump 2591079..2592002 Yersinia pseudotuberculosis IP 32953 2954136 YP_070717.1 CDS YPTB2200 NC_006155.1 2592808 2593986 R similar to Salmonella typhi STY1507 aminotransferase (63.8% evalue=1.E-145); Salmonella typhimurium STM1557 aminotransferase (63.3% evalue=1.E-148); aminotransferase complement(2592808..2593986) Yersinia pseudotuberculosis IP 32953 2954137 YP_070718.1 CDS YPTB2203 NC_006155.1 2595480 2595950 R similar to Yersinia pestis YPO2284 hypothetical protein (99.3% evalue=6.E-91); hypothetical protein complement(2595480..2595950) Yersinia pseudotuberculosis IP 32953 2954140 YP_070719.1 CDS YPTB2204 NC_006155.1 2596094 2597044 R similar to Yersinia pestis YPO2285 ribose-binding periplasmic protein (partial) (99.5% evalue=1.E-113); Brucella melitensis BMEII0435 D-ribose-binding periplasmic protein precursor (80.6% evalue=1.E-122); ribose/sugar-ABC transporter substrate-binding protein complement(2596094..2597044) Yersinia pseudotuberculosis IP 32953 2954141 YP_070720.1 CDS YPTB2205 NC_006155.1 2597263 2598324 R similar to Mesorhizobium loti mll7011 ribose ABC transporter, permease (50.3% evalue=3.E-85); Brucella melitensis BMEII0433 ribose transport system permease RbsC (77.4% evalue=1.E-148); sugar/ribose ABC transporter permease complement(2597263..2598324) Yersinia pseudotuberculosis IP 32953 2954142 YP_070721.1 CDS YPTB2206 NC_006155.1 2598351 2599889 R similar to Mesorhizobium loti mll7012 ribose ABC transporter, ATP-binding protein (48.1% evalue=1.E-127); Brucella melitensis BMEII0432 ribose transport ATP-binding protein RbsA (73.2% evalue=0); sugar ABC transporter ATPase complement(2598351..2599889) Yersinia pseudotuberculosis IP 32953 2954143 YP_070722.1 CDS YPTB2207 NC_006155.1 2599886 2600539 R similar to Sinorhizobium meliloti SMb20350 hypothetical protein (30.4% evalue=7.E-13); Brucella melitensis BMEII0431 hypothetical protein (55.3% evalue=2.E-33); hypothetical protein complement(2599886..2600539) Yersinia pseudotuberculosis IP 32953 2954144 YP_070723.1 CDS YPTB2208 NC_006155.1 2601294 2602325 D similar to Yersinia pestis YPO2286 conserved hypothetical protein (99.7% evalue=0); Clostridium acetobutylicum CAC0106 ABC-type probable sulfate transporter, periplasmic binding protein (24.8% evalue=2.E-14); taurine/sulfonate ABC transporter perplasmic-binding protein 2601294..2602325 Yersinia pseudotuberculosis IP 32953 2954145 YP_070724.1 CDS YPTB2209 NC_006155.1 2602329 2603150 D similar to Yersinia pestis YPO2287 transport system permease (100% evalue=1.E-158); Bacillus subtilis BG10657 ssuC, ygaM, yzeB; aliphatic sulfonates transport system permease (36.5% evalue=4.E-45); taurine/sulfonate ABC transporter permease 2602329..2603150 Yersinia pseudotuberculosis IP 32953 2954146 YP_070725.1 CDS tauB NC_006155.1 2603160 2603978 D similar to Mesorhizobium loti mll1253 ATP-binding protein of ABC transporter (45.1% evalue=3.E-62); Methanocaldococcus jannaschii MJ0412 tauB; taurine transport system ATP-binding protein (48.3% evalue=1.E-65); taurine/sulfonates ABC transporter ATP-binding protein 2603160..2603978 Yersinia pseudotuberculosis IP 32953 2956667 YP_070726.1 CDS amn NC_006155.1 2604403 2605893 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(2604403..2605893) Yersinia pseudotuberculosis IP 32953 2955188 YP_070727.1 CDS YPTB2212 NC_006155.1 2606099 2607547 D similar to Yersinia pestis YPO2289 virulence factor (97.6% evalue=0); Salmonella typhimurium STM1593 srfA; ssrAB activated gene (37.8% evalue=4.E-85); virulence factor 2606099..2607547 Yersinia pseudotuberculosis IP 32953 2954147 YP_070728.1 CDS YPTB2213 NC_006155.1 2607552 2610605 D similar to Yersinia pestis YPO2290 virulence factor (99.1% evalue=0); Salmonella typhimurium STM1594 srfB; ssrAB activated gene (56.8% evalue=0); virulence factor 2607552..2610605 Yersinia pseudotuberculosis IP 32953 2954148 YP_070729.1 CDS YPTB2214 NC_006155.1 2610602 2613142 D similar to Yersinia pestis YPO2291 virulence factor (98.5% evalue=0); Pasteurella multocida PM1820 unknown (39.5% evalue=3.E-84); virulence factor 2610602..2613142 Yersinia pseudotuberculosis IP 32953 2954149 YP_070730.1 CDS YPTB2215 NC_006155.1 2613311 2614105 R similar to Yersinia pestis YPO2292 lipoprotein (98.8% evalue=1.E-146); Salmonella typhimurium STM3036 inner membrane protein (45.1% evalue=5.E-61); lipoprotein complement(2613311..2614105) Yersinia pseudotuberculosis IP 32953 2954150 YP_070731.1 CDS ilvB NC_006155.1 2614891 2616558 D catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase catalytic subunit 2614891..2616558 Yersinia pseudotuberculosis IP 32953 2955871 YP_070732.1 CDS ilvN NC_006155.1 2616560 2616907 D with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 2616560..2616907 Yersinia pseudotuberculosis IP 32953 2955879 YP_070733.1 CDS YPTB2218 NC_006155.1 2616974 2617648 R manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase complement(2616974..2617648) Yersinia pseudotuberculosis IP 32953 2954151 YP_070734.1 CDS YPTB2219 NC_006155.1 2617779 2620175 R similar to Yersinia pestis YPO2297 membrane protein (99% evalue=0); hypothetical protein complement(2617779..2620175) Yersinia pseudotuberculosis IP 32953 2954152 YP_070735.1 CDS phoA NC_006155.1 2620721 2622166 R similar to Yersinia pestis YPO2298 phoA; alkaline phosphatase precursor (100% evalue=0); Escherichia coli Z0479 phoA; alkaline phosphatase (74.3% evalue=0); alkaline phosphatase complement(2620721..2622166) Yersinia pseudotuberculosis IP 32953 2956265 YP_070736.1 CDS ogt NC_006155.1 2622424 2622942 D similar to Yersinia pestis YPO2299 ogt; methylated-DNA--protein-cysteine methyltransferase (100% evalue=1.E-97); Escherichia coli Z2432 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase (59.1% evalue=5.E-55); methylated-DNA--protein-cysteine methyltransferase 2622424..2622942 Yersinia pseudotuberculosis IP 32953 2956187 YP_070737.1 CDS fnr NC_006155.1 2623015 2623767 D Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2623015..2623767 Yersinia pseudotuberculosis IP 32953 2955628 YP_070738.1 CDS YPTB2223 NC_006155.1 2623902 2624858 D with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2623902..2624858 Yersinia pseudotuberculosis IP 32953 2954153 YP_070739.1 CDS pntB NC_006155.1 2625134 2626528 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(2625134..2626528) Yersinia pseudotuberculosis IP 32953 2956292 YP_070740.1 CDS pntA NC_006155.1 2626601 2628127 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(2626601..2628127) Yersinia pseudotuberculosis IP 32953 2956291 YP_070741.1 CDS YPTB2226 NC_006155.1 2628248 2628451 R similar to Yersinia pestis YPO2304 hypothetical protein, 99% identical.; hypothetical protein complement(2628248..2628451) Yersinia pseudotuberculosis IP 32953 2954154 YP_070742.1 CDS YPTB2227 NC_006155.1 2628657 2629610 D similar to Yersinia pestis YPO2305 exported protein (100% evalue=1.E-178); Escherichia coli Z2603 hypothetical protein (70.3% evalue=1.E-124); hypothetical protein 2628657..2629610 Yersinia pseudotuberculosis IP 32953 2954155 YP_070743.1 CDS YPTB2228 NC_006155.1 2629880 2631271 D similar to Yersinia pestis YPO2306 amino acid antiporter (99.7% evalue=0); Escherichia coli JW1597 arcD; arginine/ornithine antiporter (74.8% evalue=0); APC family arginine/ornithine antiporter 2629880..2631271 Yersinia pseudotuberculosis IP 32953 2954156 YP_070744.1 CDS YPTB2229 NC_006155.1 2631295 2631711 R similar to Yersinia pestis YPO2307 conserved hypothetical protein (100% evalue=5.E-74); Vibrio cholerae VC1189 hypothetical protein (41.7% evalue=2.E-21); hypothetical protein complement(2631295..2631711) Yersinia pseudotuberculosis IP 32953 2954157 YP_070745.1 CDS rstA NC_006155.1 2632008 2632754 D response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2632008..2632754 Yersinia pseudotuberculosis IP 32953 2956558 YP_070746.1 CDS rstB NC_006155.1 2632754 2634058 D similar to Yersinia pestis YPO2309 rstB, uspT; two-component regulatory system, sensor kinase (99.2% evalue=0); Salmonella typhimurium STM1471 rstB; sensory histidine kinase in two-component regulatory system with RstA (70% evalue=1.E-171); sensor protein RstB 2632754..2634058 Yersinia pseudotuberculosis IP 32953 2956559 YP_070747.1 CDS YPTB2232 NC_006155.1 2634136 2635635 D similar to Yersinia pestis YPO2310 carboxypeptidase (99.3% evalue=0); Vibrio cholerae VC1414 thermostable carboxypeptidase 1 (55.8% evalue=1.E-159); carboxypeptidase 2634136..2635635 Yersinia pseudotuberculosis IP 32953 2954158 YP_070748.1 CDS YPTB2233 NC_006155.1 2636474 2639458 D similar to Yersinia pestis YPO2380 sepC; insecticial toxin (72.3% evalue=0); insecticidal toxin complex 2636474..2639458 Yersinia pseudotuberculosis IP 32953 2954159 YP_070749.1 CDS YPTB2234 NC_006155.1 2640100 2640678 R similar to Yersinia pestis YPO2315 exported protein (100% evalue=1.E-108); Salmonella typhi STY1194 exported protein (80.1% evalue=5.E-87); hypothetical protein complement(2640100..2640678) Yersinia pseudotuberculosis IP 32953 2954160 YP_070750.1 CDS YPTB2235 NC_006155.1 2640704 2641258 R similar to Yersinia pestis YPO2316 membrane protein (100% evalue=1.E-104); Salmonella typhimurium STM1158 inner membrane protein (62.6% evalue=4.E-68); hypothetical protein complement(2640704..2641258) Yersinia pseudotuberculosis IP 32953 2954161 YP_070751.1 CDS YPTB2236 NC_006155.1 2641653 2641865 D similar to Yersinia pestis YPO2317 hypothetical protein, 100% identical.; hypothetical protein 2641653..2641865 Yersinia pseudotuberculosis IP 32953 2954162 YP_070752.1 CDS YPTB2237 NC_006155.1 2641862 2642158 D similar to Yersinia pestis YPO2318 acid shock protein, 93% identical; acid shock protein 2641862..2642158 Yersinia pseudotuberculosis IP 32953 2954163 YP_070753.1 CDS YPTB2238 NC_006155.1 2642492 2643334 D similar to Yersinia pestis YPO2319 pepetidase (98.5% evalue=1.E-156); Escherichia coli JW1590 hypothetical protein (61.8% evalue=1.E-87); pepetidase 2642492..2643334 Yersinia pseudotuberculosis IP 32953 2954164 YP_070754.1 CDS YPTB2239 NC_006155.1 2643390 2643713 R similar to Yersinia pestis YPO3485 transcriptional regulatory protein (38.6% evalue=5.E-08); DNA-binding phage-related protein complement(2643390..2643713) Yersinia pseudotuberculosis IP 32953 2954165 YP_070755.1 CDS YPTB2240 NC_006155.1 2643710 2644081 R similar to Yersinia pestis YPO2321 phage protein (99% evalue=1.E-53); hypothetical protein complement(2643710..2644081) Yersinia pseudotuberculosis IP 32953 2954166 YP_070756.2 CDS hrpA NC_006155.1 2644378 2648220 R involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA complement(2644378..2648220) Yersinia pseudotuberculosis IP 32953 2955835 YP_070757.1 CDS acpD NC_006155.1 2648710 2649315 D FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2648710..2649315 Yersinia pseudotuberculosis IP 32953 2955167 YP_070758.1 CDS YPTB2243 NC_006155.1 2649436 2650392 R similar to Yersinia pestis YPO2324 transcriptional regulatory protein (100% evalue=0); Ralstonia solanacearum RS01477 dalR, RSc2127; transcriptional regulator (repressor) transcription regulator protein (53.3% evalue=3.E-90); transcriptional regulator complement(2649436..2650392) Yersinia pseudotuberculosis IP 32953 2954167 YP_070759.1 CDS dalD NC_006155.1 2650602 2651993 D similar to Yersinia pestis YPO2325 dalD; D-arabinitol 4-dehydrogenase (99.5% evalue=0); Ralstonia solanacearum RS01475 dalD, RSc2129; D-arabinitol dehydrogenase oxidoreductase (59.3% evalue=1.E-153); mannitol dehydrogenase 2650602..2651993 Yersinia pseudotuberculosis IP 32953 2955423 YP_070760.1 CDS YPTB2245 NC_006155.1 2652175 2652546 R similar to Yersinia pestis YPO2326 exported protein (100% evalue=9.E-65); Salmonella typhimurium STM1644 ydbL; periplasmic protein (60% evalue=6.E-27); hypothetical protein complement(2652175..2652546) Yersinia pseudotuberculosis IP 32953 2954168 YP_070761.1 CDS YPTB2246 NC_006155.1 2652556 2652750 R similar to Yersinia pestis YPO2327 lipoprotein (98.3% evalue=3.E-27); Salmonella typhi STY1424 lipoprotein (68.5% evalue=1.E-13); lipoprotein complement(2652556..2652750) Yersinia pseudotuberculosis IP 32953 2954169 YP_070762.1 CDS YPTB2247 NC_006155.1 2652747 2655443 R similar to Yersinia pestis YPO2328 membrane protein (99.7% evalue=0); Escherichia coli b1381 ydbH; hypothetical 96.8 kD protein in ldhA-tynA intergenic region (46.5% evalue=0); hypothetical protein complement(2652747..2655443) Yersinia pseudotuberculosis IP 32953 2954170 YP_070763.1 CDS ldhA NC_006155.1 2655709 2656701 D Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 2655709..2656701 Yersinia pseudotuberculosis IP 32953 2955935 YP_070764.1 CDS hslJ NC_006155.1 2656771 2657223 D similar to Yersinia pestis YPO2330 hslJ; heat shock protein (100% evalue=3.E-84); Escherichia coli Z2330 hslJ; heat shock protein hslJ (44.7% evalue=1.E-27); heat-inducible protein 2656771..2657223 Yersinia pseudotuberculosis IP 32953 2955839 YP_070765.1 CDS YPTB2250 NC_006155.1 2657281 2657694 R similar to Yersinia pestis YPO2331 lipoprotein (99.1% evalue=5.E-61); Escherichia coli JW1373 ydbJ; Hypothetical protein (56.2% evalue=5.E-10); lipoprotein complement(2657281..2657694) Yersinia pseudotuberculosis IP 32953 2954171 YP_070766.1 CDS mgtC2 NC_006155.1 2657907 2658566 D inner membrane protein involved in cell density-dependent acid resistance; part of the acid fitness island (AFI) of E. coli; Mg(2+) transport ATPase 2657907..2658566 Yersinia pseudotuberculosis IP 32953 2956039 YP_070767.1 CDS qacE NC_006155.1 2658626 2658964 R similar to Yersinia pestis YPO2333 qacE; quaternary ammonium compound-resistance protein (100% evalue=1.E-56); Brucella melitensis BMEI1045 quateRNAry ammonium compound-resistance protein qacE (55.4% evalue=3.E-30); DMT superfamily multiple drug efflux pump complement(2658626..2658964) Yersinia pseudotuberculosis IP 32953 2956394 YP_070768.1 CDS nifJ NC_006155.1 2659437 2662970 D similar to Yersinia pestis YPO2334 nifJ; pyruvate-flavodoxin oxidoreductase (99.9% evalue=0); Escherichia coli b1378 ydbK; pyruvate ferredoxin oxidoreductase (80.5% evalue=0); pyruvate-flavodoxin oxidoreductase 2659437..2662970 Yersinia pseudotuberculosis IP 32953 2956140 YP_070769.1 CDS YPTB2254 NC_006155.1 2663245 2664186 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2663245..2664186 Yersinia pseudotuberculosis IP 32953 2954172 YP_070770.1 CDS YPTB2255 NC_006155.1 2664457 2665461 D similar to Yersinia pestis YPO2336 exported protein (100% evalue=0); Mycobacterium tuberculosis_CDC1551MT2559 carboxylesterase family protein (35.5% evalue=8.E-27); hypothetical protein 2664457..2665461 Yersinia pseudotuberculosis IP 32953 2954173 YP_070771.1 CDS YPTB2256 NC_006155.1 2665773 2666612 D similar to Yersinia pestis YPO2337 regulatory protein (99.2% evalue=1.E-163); regulatory protein 2665773..2666612 Yersinia pseudotuberculosis IP 32953 2954174 YP_070772.1 CDS zntB NC_006155.1 2666986 2667969 R similar to Yersinia pestis YPO2338 CorA-like Mg2+ transporter protein (99.6% evalue=0); Escherichia coli JW1336 hypothetical protein (64.8% evalue=1.E-125); Citation: Worlock and Smith (2002) J. Bacteriol. 184:4369-4373; zinc transporter complement(2666986..2667969) Yersinia pseudotuberculosis IP 32953 2957125 YP_070773.1 CDS mppA NC_006155.1 2668212 2669828 R similar to Yersinia pestis YPO2339 mppA; periplasmic murein peptide-binding protein (100% evalue=0); Escherichia coli b1329 oligopeptide transport system substrate-binding protein (70.5% evalue=0); murein peptide-ABC transporter substrate-binding protein complement(2668212..2669828) Yersinia pseudotuberculosis IP 32953 2956073 YP_070774.1 CDS YPTB2259 NC_006155.1 2670206 2670976 D similar to Yersinia pestis YPO2340 conserved hypothetical protein (99.6% evalue=1.E-145); Escherichia coli b1326 ycjI; hypothetical 28.8 kD protein in tpx-fnr itergenic region (70.5% evalue=6.E-92); murein peptide amidase A 2670206..2670976 Yersinia pseudotuberculosis IP 32953 2954175 YP_070775.1 CDS YPTB2260 NC_006155.1 2671018 2671992 R similar to Yersinia pestis YPO2341 mandelate racemase / muconate lactonizing protein (100% evalue=0); Salmonella typhimurium STM1681 ycjG; chloromuconate cycloisomerase (muconate cycloisomerase) (68.2% evalue=1.E-123); mandelate racemase complement(2671018..2671992) Yersinia pseudotuberculosis IP 32953 2954176 YP_070776.1 CDS tpx NC_006155.1 2672155 2672658 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2672155..2672658 Yersinia pseudotuberculosis IP 32953 2956727 YP_070777.1 CDS tyrR NC_006155.1 2672822 2674399 R regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR complement(2672822..2674399) Yersinia pseudotuberculosis IP 32953 2956848 YP_070778.1 CDS YPTB2263 NC_006155.1 2674736 2675182 D similar to Yersinia pestis YPO2345 conserved hypothetical protein (100% evalue=2.E-81); hypothetical protein 2674736..2675182 Yersinia pseudotuberculosis IP 32953 2954177 YP_070779.1 CDS YPTB2264 NC_006155.1 2675261 2675719 D similar to Yersinia pestis YPO2346 conserved hypothetical protein (99.3% evalue=1.E-84); Mesorhizobium loti mlr9079 hypothetical protein (34.4% evalue=9.E-08); hypothetical protein 2675261..2675719 Yersinia pseudotuberculosis IP 32953 2954178 YP_070780.1 CDS YPTB2265 NC_006155.1 2675729 2676790 R similar to Yersinia pestis YPO2347 membrane protein (100% evalue=0); Escherichia coli ECs1901 hypothetical protein (74.3% evalue=1.E-146); hypothetical protein complement(2675729..2676790) Yersinia pseudotuberculosis IP 32953 2954179 YP_070781.1 CDS YPTB2266 NC_006155.1 2676787 2678184 R similar to Yersinia pestis YPO2348 conserved hypothetical protein (100% evalue=0); Escherichia coli Z2458 ycjX; EC 2.1 enzymes (80.6% evalue=0); hypothetical protein complement(2676787..2678184) Yersinia pseudotuberculosis IP 32953 2954180 YP_070782.1 CDS pspD NC_006155.1 2678165 2678407 R peripheral inner membrane phage-shock protein complement(2678165..2678407) Yersinia pseudotuberculosis IP 32953 2956344 YP_070783.1 CDS pspC NC_006155.1 2678492 2678851 R with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC complement(2678492..2678851) Yersinia pseudotuberculosis IP 32953 2956343 YP_070784.1 CDS pspB NC_006155.1 2678851 2679078 R acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B complement(2678851..2679078) Yersinia pseudotuberculosis IP 32953 2956342 YP_070785.1 CDS pspA NC_006155.1 2679240 2679905 R involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA complement(2679240..2679905) Yersinia pseudotuberculosis IP 32953 2956341 YP_070786.1 CDS pspF NC_006155.1 2680150 2681178 D transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2680150..2681178 Yersinia pseudotuberculosis IP 32953 2956345 YP_070787.1 CDS sapA NC_006155.1 2681777 2683420 D similar to Yersinia pestis YPO2355 sapA; peptide transport periplasmic protein precursor (99.8% evalue=0); Escherichia coli b1294 sapA; peptide transport system substrate-binding protein (76.2% evalue=0); peptide ABC transporter substrate-binding protein sapA 2681777..2683420 Yersinia pseudotuberculosis IP 32953 2956566 YP_070788.1 CDS sapB NC_006155.1 2683417 2684382 D similar to Yersinia pestis YPO2356 sapB; peptide transport system permease (100% evalue=1.E-180); Escherichia coli b1293 sapB; peptide transport system permease (76.9% evalue=1.E-146); peptide ABC transporter permease SapB 2683417..2684382 Yersinia pseudotuberculosis IP 32953 2956567 YP_070789.1 CDS sapC NC_006155.1 2684369 2685259 D similar to Yersinia pestis YPO2357 sapC; peptide transport system permease (100% evalue=1.E-164); Escherichia coli b1292 sapC; peptide transport system permease (77% evalue=1.E-128); peptide ABC transporter permease SapC 2684369..2685259 Yersinia pseudotuberculosis IP 32953 2956568 YP_070790.1 CDS sapD NC_006155.1 2685259 2686251 D similar to Yersinia pestis YPO2358 sapD; peptide transport system ATP-binding protein (100% evalue=0); Salmonella typhi STY1356 sapD; peptide transport system ATP-binding protein SapD (81.8% evalue=1.E-164); peptide ABC transporter ATP-binding protein SapD 2685259..2686251 Yersinia pseudotuberculosis IP 32953 2956569 YP_070791.1 CDS sapF NC_006155.1 2686251 2687066 D similar to Yersinia pestis YPO2359 sapF; peptide transport system ATP-binding protein (100% evalue=1.E-150); Escherichia coli JW1283 sapF; Peptide transport system ATP-binding protein (82.3% evalue=1.E-124); peptide ABC transporter ATP-binding protein SapF 2686251..2687066 Yersinia pseudotuberculosis IP 32953 2956570 YP_070792.1 CDS YPTB2277 NC_006155.1 2687457 2688737 D similar to Yersinia pestis YPO2360 conserved hypothetical protein (100% evalue=0); Escherichia coli b1287 yciW; hypothetical 45.1 kD protein in rnb-fabI intergenic region (37.8% evalue=6.E-49); hypothetical protein 2687457..2688737 Yersinia pseudotuberculosis IP 32953 2954181 YP_070793.1 CDS tppB NC_006155.1 2689380 2690885 D mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease 2689380..2690885 Yersinia pseudotuberculosis IP 32953 2954182 YP_070794.1 CDS YPTB2279 NC_006155.1 2691141 2691731 D similar to Yersinia pestis YPO2362 membrane protein (100% evalue=1.E-110); Salmonella typhimurium STM2169 yohC; paral transport protein (65.4% evalue=1.E-73); hypothetical protein 2691141..2691731 Yersinia pseudotuberculosis IP 32953 2954183 YP_070795.1 CDS YPTB2280 NC_006155.1 2691977 2692240 D similar to Yersinia pestis YPO2363 conserved hypothetical protein (100% evalue=1.E-42); Salmonella typhimurium STM4194 yjbD; cytoplasmic protein (53.4% evalue=3.E-16); hypothetical protein 2691977..2692240 Yersinia pseudotuberculosis IP 32953 2954184 YP_070796.1 CDS gst NC_006155.1 2692485 2693090 D similar to Yersinia pestis YPO2367 gst; glutathione S-transferase (100% evalue=1.E-111); Salmonella typhi STY1671 gst; glutathione S-transferase (61.5% evalue=7.E-71); glutathionine S-transferase 2692485..2693090 Yersinia pseudotuberculosis IP 32953 2955761 YP_070797.1 CDS pdxY NC_006155.1 2693150 2694010 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase complement(2693150..2694010) Yersinia pseudotuberculosis IP 32953 2956226 YP_070798.1 CDS tyrS NC_006155.1 2694165 2695439 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(2694165..2695439) Yersinia pseudotuberculosis IP 32953 2956849 YP_070799.1 CDS pdxH NC_006155.1 2695621 2696274 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(2695621..2696274) Yersinia pseudotuberculosis IP 32953 2956224 YP_070800.1 CDS YPTB2285 NC_006155.1 2696365 2696679 R similar to Yersinia pestis YPO2371 lipoprotein (100% evalue=2.E-55); Salmonella typhimurium STM1447 ydhA; outer membrane lipoprotein (44.1% evalue=2.E-20); lipoprotein complement(2696365..2696679) Yersinia pseudotuberculosis IP 32953 2954185 YP_070801.1 CDS anmK NC_006155.1 2696737 2697849 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(2696737..2697849) Yersinia pseudotuberculosis IP 32953 2954186 YP_070802.1 CDS slyB NC_006155.1 2698405 2698872 D similar to Yersinia pestis YPO2373 slyB, pcpY; lipoprotein (100% evalue=2.E-81); Escherichia coli ECs2350 outer membrane protein (74.8% evalue=6.E-63); lipoprotein 2698405..2698872 Yersinia pseudotuberculosis IP 32953 2956610 YP_070803.1 CDS rovA NC_006155.1 2699016 2699447 R Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA complement(2699016..2699447) Yersinia pseudotuberculosis IP 32953 2956481 YP_070804.1 CDS YPTB2289 NC_006155.1 2700245 2701141 R similar to Yersinia pestis YPO2375 aldo/keto reductase (100% evalue=1.E-173); Escherichia coli JW1639 ydhF; Hypothetical oxidoreductase (73.1% evalue=1.E-128); aldo/keto reductase complement(2700245..2701141) Yersinia pseudotuberculosis IP 32953 2954187 YP_070805.1 CDS YPTB2290 NC_006155.1 2701273 2701638 R similar to Yersinia pestis YPO2376 conserved hypothetical protein (100% evalue=2.E-67); Escherichia coli JW1640 ydhL; Hypothetical protein (68.4% evalue=5.E-32); hypothetical protein complement(2701273..2701638) Yersinia pseudotuberculosis IP 32953 2954188 YP_070806.1 CDS YPTB2291 NC_006155.1 2701686 2703323 D with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein 2701686..2703323 Yersinia pseudotuberculosis IP 32953 2954189 YP_070807.1 CDS YPTB2292 NC_006155.1 2703566 2704165 D similar to Yersinia pestis YPO2378 TetR-family transcriptional regulatory protein (100% evalue=1.E-110); Escherichia coli Z2666 hypothetical protein (51.5% evalue=1.E-47); TetR family transcriptional regulator 2703566..2704165 Yersinia pseudotuberculosis IP 32953 2954190 YP_070808.1 CDS YPTB2293 NC_006155.1 2704253 2705350 D FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 2704253..2705350 Yersinia pseudotuberculosis IP 32953 2954191 YP_070809.1 CDS sepC NC_006155.1 2705571 2708519 R similar to Yersinia pestis YPO2380 sepC; insecticial toxin (99.4% evalue=0); insecticial toxin complement(2705571..2708519) Yersinia pseudotuberculosis IP 32953 2956592 YP_070810.1 CDS gloA NC_006155.1 2708792 2709199 D similar to Yersinia pestis YPO2381 gloA; lactoylglutathione lyase (99.2% evalue=5.E-73); Escherichia coli b1651 gloA; lactoylglutathione lyase (80% evalue=9.E-60); lactoylglutathione lyase 2708792..2709199 Yersinia pseudotuberculosis IP 32953 2955704 YP_070811.1 CDS rnt NC_006155.1 2709311 2709958 D Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2709311..2709958 Yersinia pseudotuberculosis IP 32953 2956476 YP_070812.1 CDS YPTB2297 NC_006155.1 2710267 2710617 R similar to Yersinia pestis YPO2383 conserved hypothetical protein (100% evalue=5.E-64); Salmonella typhi STY1689 ydhD; conserved hypothetical protein (88.6% evalue=5.E-55); hypothetical protein complement(2710267..2710617) Yersinia pseudotuberculosis IP 32953 2954192 YP_070813.1 CDS YPTB2298 NC_006155.1 2711042 2711908 D similar to Yersinia pestis YPO2385 exported protein (99.3% evalue=1.E-162); Escherichia coli b1655 ydhO; hypothetical 29.9 kD protein in lhr-sodB intergenic region precursor (51.9% evalue=1.E-73); hypothetical protein 2711042..2711908 Yersinia pseudotuberculosis IP 32953 2954193 YP_070814.1 CDS sodB NC_006155.1 2712269 2712847 D Fe; SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase 2712269..2712847 Yersinia pseudotuberculosis IP 32953 2956619 YP_070815.1 CDS purR NC_006155.1 2713374 2714399 D binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 2713374..2714399 Yersinia pseudotuberculosis IP 32953 2956377 YP_070816.1 CDS YPTB2301 NC_006155.1 2714488 2715420 R similar to Yersinia pestis YPO2388 LysR-family transcriptional regulatory protein (99.6% evalue=0); Escherichia coli JW1651 ydhB; Hypothetical protein (70.3% evalue=1.E-128); DNA-binding transcriptional regulator complement(2714488..2715420) Yersinia pseudotuberculosis IP 32953 2954194 YP_070817.1 CDS YPTB2302 NC_006155.1 2715710 2716912 D uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2715710..2716912 Yersinia pseudotuberculosis IP 32953 2954195 YP_070818.1 CDS cfa NC_006155.1 2717392 2718543 D catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2717392..2718543 Yersinia pseudotuberculosis IP 32953 2955321 YP_070819.1 CDS ribE NC_006155.1 2718594 2719250 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2718594..2719250) Yersinia pseudotuberculosis IP 32953 2956453 YP_070820.1 CDS YPTB2305 NC_006155.1 2719499 2720872 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2719499..2720872 Yersinia pseudotuberculosis IP 32953 2954196 YP_070821.1 CDS pykF NC_006155.1 2722148 2723560 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2722148..2723560 Yersinia pseudotuberculosis IP 32953 2956383 YP_070822.1 CDS lpp NC_006155.1 2723881 2724117 D similar to Yersinia pestis YPO2394 lpp, mlpA; major outer membrane lipoprotein (100% evalue=2.E-36); Salmonella typhimurium STM1377 lpp; murein lipoprotein, links outer and inner membranes (91% evalue=3.E-33); major outer membrane lipoprotein 2723881..2724117 Yersinia pseudotuberculosis IP 32953 2955965 YP_070823.1 CDS YPTB2308 NC_006155.1 2724478 2725542 R similar to Escherichia coli ECs1491 hypothetical protein (63.4% evalue=1.E-104); Escherichia coli Z1752 ycfS; orf, hypothetical protein (63.4% evalue=1.E-104); hypothetical protein complement(2724478..2725542) Yersinia pseudotuberculosis IP 32953 2954197 YP_070824.1 CDS YPTB2309 NC_006155.1 2725813 2726235 R Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE complement(2725813..2726235) Yersinia pseudotuberculosis IP 32953 2954198 YP_070825.1 CDS YPTB2310 NC_006155.1 2726324 2727544 R catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine; bifunctional cysteine desulfurase/selenocysteine lyase complement(2726324..2727544) Yersinia pseudotuberculosis IP 32953 2954199 YP_070826.1 CDS YPTB2311 NC_006155.1 2727541 2728866 R with SufBC activates cysteine desulfurase SufS; cysteine desulfurase complement(2727541..2728866) Yersinia pseudotuberculosis IP 32953 2954200 YP_070827.1 CDS sufC NC_006155.1 2728841 2729587 R part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase complement(2728841..2729587) Yersinia pseudotuberculosis IP 32953 2954201 YP_070828.1 CDS YPTB2313 NC_006155.1 2729772 2731283 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase complement(2729772..2731283) Yersinia pseudotuberculosis IP 32953 2954202 YP_070829.1 CDS sufA NC_006155.1 2731298 2731669 R functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein complement(2731298..2731669) Yersinia pseudotuberculosis IP 32953 2954203 YP_070830.1 CDS YPTB2315 NC_006155.1 2732264 2732680 R similar to Yersinia pestis YPO2406 conserved hypothetical protein (100% evalue=1.E-76); Escherichia coli b1686 hypothetical protein (69.8% evalue=1.E-51); hypothetical protein complement(2732264..2732680) Yersinia pseudotuberculosis IP 32953 2954204 YP_070831.1 CDS YPTB2316 NC_006155.1 2732802 2735858 R similar to Yersinia pestis YPO2407 conserved hypothetical protein (99.6% evalue=0); Escherichia coli Z2715 ydiJ; oxidase (79% evalue=0); hypothetical protein complement(2732802..2735858) Yersinia pseudotuberculosis IP 32953 2954205 YP_070832.1 CDS YPTB2317 NC_006155.1 2736496 2737599 D YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; hypothetical protein 2736496..2737599 Yersinia pseudotuberculosis IP 32953 2954206 YP_070833.1 CDS ppsA NC_006155.1 2738236 2740620 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2738236..2740620) Yersinia pseudotuberculosis IP 32953 2956311 YP_070834.1 CDS YPTB2319 NC_006155.1 2740995 2741816 D similar to Yersinia pestis YPO2410 Conserved hypothetical protein (99.6% evalue=1.E-152); Escherichia coli Z2732 ydiA; orf, hypothetical protein (80.5% evalue=1.E-123); hypothetical protein 2740995..2741816 Yersinia pseudotuberculosis IP 32953 2954207 YP_070835.1 CDS aroH NC_006155.1 2741973 2743019 D tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2741973..2743019 Yersinia pseudotuberculosis IP 32953 2955227 YP_070836.1 CDS YPTB2321 NC_006155.1 2743188 2744651 R similar to Escherichia coli b1706 hypothetical protein (64.9% evalue=0); Escherichia coli JW1696 ydiU; Hypothetical protein (64.9% evalue=0); hypothetical protein complement(2743188..2744651) Yersinia pseudotuberculosis IP 32953 2954208 YP_070837.1 CDS lplA NC_006155.1 2744703 2745719 R Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A complement(2744703..2745719) Yersinia pseudotuberculosis IP 32953 2955964 YP_070838.1 CDS nlpC NC_006155.1 2745844 2746308 R similar to Yersinia pestis YPO2415 nlpC; lipoprotein (100% evalue=2.E-87); Salmonella typhimurium STM1343 nlpC; lipoprotein (66.6% evalue=2.E-58); lipoprotein complement(2745844..2746308) Yersinia pseudotuberculosis IP 32953 2956145 YP_070839.1 CDS pmrM NC_006155.1 2746588 2746974 R similar to Yersinia pestis YPO2416 membrane protein (100% evalue=1.E-69); Pseudomonas aeruginosa PA3558 hypothetical protein (42.9% evalue=2.E-20); hypothetical protein complement(2746588..2746974) Yersinia pseudotuberculosis IP 32953 2956287 YP_070840.1 CDS pmrL NC_006155.1 2746971 2747315 R similar to Yersinia pestis YPO2417 membrane protein (99.1% evalue=3.E-60); Escherichia coli JW2252 hypothetical protein (51.4% evalue=1.E-22); hypothetical protein complement(2746971..2747315) Yersinia pseudotuberculosis IP 32953 2956286 YP_070841.1 CDS arnT NC_006155.1 2747312 2748976 R catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase complement(2747312..2748976) Yersinia pseudotuberculosis IP 32953 2956285 YP_070842.1 CDS pmrJ NC_006155.1 2748973 2749878 R similar to Yersinia pestis YPO2419 conserved hypothetical protein (100% evalue=1.E-176); Escherichia coli b2256 hypothetical protein (61.9% evalue=1.E-107); hypothetical protein complement(2748973..2749878) Yersinia pseudotuberculosis IP 32953 2956284 YP_070843.1 CDS pmrI NC_006155.1 2749875 2751878 R Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase complement(2749875..2751878) Yersinia pseudotuberculosis IP 32953 2956283 YP_070844.1 CDS pmrF NC_006155.1 2751875 2752858 R catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase complement(2751875..2752858) Yersinia pseudotuberculosis IP 32953 2956281 YP_070845.1 CDS pmrH NC_006155.1 2752845 2753999 R catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase complement(2752845..2753999) Yersinia pseudotuberculosis IP 32953 2956282 YP_070846.1 CDS btuD NC_006155.1 2754349 2755110 R ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase complement(2754349..2755110) Yersinia pseudotuberculosis IP 32953 2955299 YP_070847.1 CDS btuE NC_006155.1 2755132 2755686 R similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase complement(2755132..2755686) Yersinia pseudotuberculosis IP 32953 2955300 YP_070848.1 CDS btuC NC_006155.1 2755756 2756763 R with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease complement(2755756..2756763) Yersinia pseudotuberculosis IP 32953 2955298 YP_070849.1 CDS YPTB2334 NC_006155.1 2756990 2757445 R similar to Yersinia pestis YPO2981 exported protein (48.7% evalue=2.E-20); hypothetical protein complement(2756990..2757445) Yersinia pseudotuberculosis IP 32953 2954209 YP_070850.1 CDS ihfA NC_006155.1 2757779 2758075 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(2757779..2758075) Yersinia pseudotuberculosis IP 32953 2955867 YP_070851.1 CDS pheT NC_006155.1 2758080 2760467 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2758080..2760467) Yersinia pseudotuberculosis IP 32953 2956250 YP_070852.1 CDS pheS NC_006155.1 2760481 2761464 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2760481..2761464) Yersinia pseudotuberculosis IP 32953 2956249 YP_070854.1 CDS rplT NC_006155.1 2761963 2762319 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2761963..2762319) Yersinia pseudotuberculosis IP 32953 2956504 YP_070855.1 CDS rpmI NC_006155.1 2762357 2762554 R similar to Yersinia pestis YPO2431 rpmI; 50S ribosomal protein L35 (100% evalue=1.E-31); Salmonella typhimurium STM1335 rpmI; 50S ribosomal subunit protein L35 (89.2% evalue=3.E-28); 50S ribosomal protein L35 complement(2762357..2762554) Yersinia pseudotuberculosis IP 32953 2956518 YP_070856.1 CDS infC NC_006155.1 2762651 2763202 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(2762651..2763202) Yersinia pseudotuberculosis IP 32953 2955886 YP_070857.1 CDS thrS NC_006155.1 2763206 2765134 R catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase complement(2763206..2765134) Yersinia pseudotuberculosis IP 32953 2956703 YP_070858.1 CDS YPTB2343 NC_006155.1 2765525 2765737 D similar to Yersinia pestis YPO2434 conserved hypothetical protein (98.5% evalue=9.E-35); hypothetical protein 2765525..2765737 Yersinia pseudotuberculosis IP 32953 2954211 YP_070859.1 CDS YPTB2344 NC_006155.1 2766047 2766424 D similar to Yersinia pestis YPO2435 membrane protein (98.4% evalue=2.E-70); hypothetical protein 2766047..2766424 Yersinia pseudotuberculosis IP 32953 2954212 YP_070860.1 CDS marC NC_006155.1 2767066 2767749 D protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 2767066..2767749 Yersinia pseudotuberculosis IP 32953 2956002 YP_070861.1 CDS YPTB2346 NC_006155.1 2767871 2768533 R similar to Yersinia pestis YPO2438 membrane-bound lytic murein transglycosylase (99.5% evalue=1.E-122); Escherichia coli b1193 mlte, sltz.; membrane-bound lytic murein transglycosylase E (49.7% evalue=2.E-52); membrane-bound lytic murein transglycosylase complement(2767871..2768533) Yersinia pseudotuberculosis IP 32953 2954213 YP_070862.1 CDS yfeA NC_006155.1 2768745 2769713 D similar to Yersinia pestis YPO2439 yfeA; periplasmic-binding protein (100% evalue=0); Pasteurella multocida PM0400 yfeA; Mn transport protein ABC transporter, iron (chelated) transporter, periplasmic-binding protein, (76.9% evalue=1.E-122); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; iron siderophore-ABC transporter substrate-binding protein YfeA 2768745..2769713 Yersinia pseudotuberculosis IP 32953 2957018 YP_070863.1 CDS yfeB NC_006155.1 2769710 2770600 D similar to Yersinia pestis YPO2440 yfeB; ATP-binding transport protein (100% evalue=1.E-167); Pasteurella multocida PM0399 yfeB; iron(III) dicitrate transport ATP-binding protein,iron (chelated) transporter (72% evalue=1.E-113); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter ATP-binding protein yfeB 2769710..2770600 Yersinia pseudotuberculosis IP 32953 2957019 YP_070864.1 CDS yfeC NC_006155.1 2770600 2771484 D similar to Yersinia pestis YPO2441 yfeC; chelated iron transport system membrane protein (99.6% evalue=1.E-161); Pasteurella multocida PM0398 yfeC; iron (chelated) ABC transporter, permease, (74.2% evalue=1.E-113); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter permease yfeC 2770600..2771484 Yersinia pseudotuberculosis IP 32953 2957020 YP_070865.1 CDS yfeD NC_006155.1 2771481 2772374 D similar to Yersinia pestis YPO2442 yfeD; chelated iron transport system membrane protein (100% evalue=1.E-166); Pasteurella multocida PM0397 yfeD; iron (chelated) transporter, permease (64.2% evalue=1.E-102); Citation: Bearden et al. (1998) J. Bacteriol. 180:1135-1147; chelated iron ABC transporter permease yfeD 2771481..2772374 Yersinia pseudotuberculosis IP 32953 2957021 YP_070866.1 CDS YPTB2351 NC_006155.1 2772442 2772654 D similar to Yersinia pestis YPO2443 hypothetical protein, 100% identical; hypothetical protein 2772442..2772654 Yersinia pseudotuberculosis IP 32953 2954214 YP_070867.1 CDS YPTB2352 NC_006155.1 2772679 2773554 D similar to Yersinia pestis YPO2444 conserved hypothetical protein (100% evalue=1.E-174); Salmonella typhi STY1787 conserved hypothetical protein (70.4% evalue=1.E-119); hypothetical protein 2772679..2773554 Yersinia pseudotuberculosis IP 32953 2954215 YP_070868.1 CDS yfeE NC_006155.1 2773683 2774237 R similar to Yersinia pestis YPO2445 yfeE; yfeABCD locus regulator (100% evalue=1.E-101); Salmonella typhi STY1788 membrane protein (67.4% evalue=2.E-68); yfeABCD locus regulator complement(2773683..2774237) Yersinia pseudotuberculosis IP 32953 2957022 YP_070869.1 CDS YPTB2354 NC_006155.1 2774648 2775313 D YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 2774648..2775313 Yersinia pseudotuberculosis IP 32953 2954216 YP_070870.1 CDS kdgF NC_006155.1 2775515 2775847 R similar to Sinorhizobium meliloti SMb21347 pectin degradation protein (44.9% evalue=2.E-18); Clostridium acetobutylicum CAC3376 possible pectin degradation protein (sugar phosphate isomerase family) (43.9% evalue=2.E-20); pectin degradation protein complement(2775515..2775847) Yersinia pseudotuberculosis IP 32953 2955910 YP_070871.1 CDS kduI NC_006155.1 2776183 2777019 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2776183..2777019 Yersinia pseudotuberculosis IP 32953 2955924 YP_070872.1 CDS kduD1 NC_006155.1 2777111 2777872 D catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2777111..2777872 Yersinia pseudotuberculosis IP 32953 2955922 YP_070873.1 CDS pelW NC_006155.1 2778217 2779884 D similar to Yersinia pestis YPO3994 pelY; periplasmic pectate lyase precursor (38.7% evalue=1.E-102); exopolygalacturonate lyase 2778217..2779884 Yersinia pseudotuberculosis IP 32953 2956228 YP_070874.1 CDS YPTB2359 NC_006155.1 2779925 2780815 D similar to Yersinia pestis YPO1722 ABC sugar transporter (permease) (100% evalue=1.E-170); Agrobacterium tumefaciens AGR_L_3351 yesP; probable ABC transporter permease YesP (60.1% evalue=1.E-101); sugar ABC transporter (permease) 2779925..2780815 Yersinia pseudotuberculosis IP 32953 2954217 YP_070875.1 CDS YPTB2360 NC_006155.1 2780808 2781728 D similar to Yersinia pestis YPO1721 sugar ABC transporter (permease) (100% evalue=1.E-175); Agrobacterium tumefaciens AGR_L_3353 lactose transport system (permease) (57.6% evalue=8.E-98); sugar ABC transporter permease 2780808..2781728 Yersinia pseudotuberculosis IP 32953 2954218 YP_070876.1 CDS YPTB2361 NC_006155.1 2781742 2782869 D similar to Yersinia pestis YPO1720 sugar ABC transporter (100% evalue=0); sugar ABC transporter ATPase 2781742..2782869 Yersinia pseudotuberculosis IP 32953 2954219 YP_070877.1 CDS YPTB2362 NC_006155.1 2782885 2784177 D similar to Yersinia pestis YPO1719 sugar-binding protein (100% evalue=0); Agrobacterium tumefaciens AGR_L_3359 unknown conserved protein (38.7% evalue=1.E-77); sugar ABC transporter substrate-binding protein 2782885..2784177 Yersinia pseudotuberculosis IP 32953 2954220 YP_070878.1 CDS YPTB2363 NC_006155.1 2784476 2785186 D similar to Yersinia pestis YPO3995 exported protein (63.5% evalue=2.E-83); oligogalacturonate specific porin 2784476..2785186 Yersinia pseudotuberculosis IP 32953 2954221 YP_070879.1 CDS ydjM NC_006155.1 2785663 2786211 D similar to Yersinia pestis YPO1717 ydjM; membrane protein (100% evalue=1.E-105); Escherichia coli ECs2434 hypothetical protein (66.4% evalue=1.E-63); hypothetical protein 2785663..2786211 Yersinia pseudotuberculosis IP 32953 2956997 YP_070880.1 CDS gltP NC_006155.1 2786415 2787806 D similar to Yersinia pestis YPO1716 gltP; transport protein (100% evalue=0); Escherichia coli JW1718 proton glutamate symport protein (gltP) homolog (83.9% evalue=0); DAACS family sodium/dicarboxylate symporter 2786415..2787806 Yersinia pseudotuberculosis IP 32953 2955723 YP_070881.1 CDS ybjR NC_006155.1 2788021 2788872 R similar to Yersinia pestis YPO1715 ybjR; probable N-acetylmuramoyl-L-alanine amidase (98.9% evalue=1.E-160); Salmonella typhi STY0927 N-acetylmuramoyl-L-alanine amidase (48.3% evalue=1.E-66); N-acetylmuramoyl-L-alanine amidase complement(2788021..2788872) Yersinia pseudotuberculosis IP 32953 2956968 YP_070882.1 CDS kdgR NC_006155.1 2789247 2790038 R similar to Yersinia pestis YPO1714 kdgR; IclR-family transcriptional regulatory protein (100% evalue=1.E-145); Escherichia coli JW1816 kdgR; Transcriptional regulator (86.3% evalue=1.E-123); IclR family transcriptional regulator complement(2789247..2790038) Yersinia pseudotuberculosis IP 32953 2955912 YP_070883.1 CDS ogl NC_006155.1 2790225 2791391 R similar to Yersinia pestis YPO1713 ogl; oligogalacturonate lyase (99.7% evalue=0); oligogalacturonate lyase complement(2790225..2791391) Yersinia pseudotuberculosis IP 32953 2956184 YP_070884.1 CDS YPTB2369 NC_006155.1 2791758 2793125 D similar to Yersinia pestis YPO1712 transport protein (99.7% evalue=0); Salmonella typhimurium STM1843 transport protein (69% evalue=0); major facilitator superfamily multidrug efflux transporter 2791758..2793125 Yersinia pseudotuberculosis IP 32953 2954222 YP_070885.1 CDS YPTB2370 NC_006155.1 2793179 2793982 R similar to Yersinia pestis YPO3881 chaperone protein (33.6% evalue=8.E-34); chaperone protein complement(2793179..2793982) Yersinia pseudotuberculosis IP 32953 2954223 YP_070886.1 CDS YPTB2371 NC_006155.1 2793979 2795142 R similar to Yersinia pestis YPO1710 fimbrial protein (100% evalue=0); Pseudomonas aeruginosa PA5284 hypothetical protein (24.2% evalue=2.E-13); fimbrial protein complement(2793979..2795142) Yersinia pseudotuberculosis IP 32953 2954224 YP_070887.1 CDS htrE NC_006155.1 2795139 2797751 R similar to Yersinia pestis YPO1709 htrE; outer membrane usher protein (99.8% evalue=0); Xylella fastidiosa XF0081 outer membrane usher protein precursor (39.9% evalue=1.E-172); outer membrane fimbrial usher porin complement(2795139..2797751) Yersinia pseudotuberculosis IP 32953 2955848 YP_070888.1 CDS ecpD NC_006155.1 2797833 2798612 R similar to Yersinia pestis YPO1708 ecpD; chaperone protein (100% evalue=1.E-141); Escherichia coli Z0151 ecpD; fimbrial chaperone protein (41.1% evalue=4.E-48); chaperone protein complement(2797833..2798612) Yersinia pseudotuberculosis IP 32953 2955494 YP_070889.1 CDS YPTB2374 NC_006155.1 2798850 2799392 R similar to Yersinia pestis YPO1707 fimbrial protein (99.4% evalue=4.E-97); Xylella fastidiosa XF0083 fimbrial subunit precursor (42.1% evalue=6.E-25); fimbrial protein complement(2798850..2799392) Yersinia pseudotuberculosis IP 32953 2954225 YP_070890.1 CDS htpX NC_006155.1 2800050 2800931 R metalloprotease; heat shock protein HtpX complement(2800050..2800931) Yersinia pseudotuberculosis IP 32953 2955845 YP_070891.1 CDS prc NC_006155.1 2801394 2803472 R Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease complement(2801394..2803472) Yersinia pseudotuberculosis IP 32953 2956315 YP_070892.1 CDS proQ NC_006155.1 2803492 2804205 R affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector complement(2803492..2804205) Yersinia pseudotuberculosis IP 32953 2956325 YP_070893.1 CDS YPTB2378 NC_006155.1 2804301 2804798 R similar to Yersinia pestis YPO1703 conserved hypothetical protein (100% evalue=4.E-91); Escherichia coli ECs2542 hypothetical protein (66.4% evalue=2.E-57); hypothetical protein complement(2804301..2804798) Yersinia pseudotuberculosis IP 32953 2954226 YP_070894.1 CDS yebS NC_006155.1 2804925 2806277 D similar to Yersinia pestis YPO1702 yebS; membrane protein (99.7% evalue=0); Salmonella typhimurium STM1848 yebS; inner membrane protein (67.2% evalue=1.E-166); hypothetical protein 2804925..2806277 Yersinia pseudotuberculosis IP 32953 2957000 YP_070895.1 CDS YPTB2380 NC_006155.1 2806246 2808897 D similar to Yersinia pestis YPO1701 conserved hypothetical protein (99.6% evalue=0); Escherichia coli JW1823 pqiB; Hypothetical protein (67.8% evalue=0); hypothetical protein 2806246..2808897 Yersinia pseudotuberculosis IP 32953 2954227 YP_070896.1 CDS YPTB2381 NC_006155.1 2809377 2809931 D similar to Yersinia pestis YPO1700 exported protein (100% evalue=1.E-101); hypothetical protein 2809377..2809931 Yersinia pseudotuberculosis IP 32953 2954228 YP_070897.1 CDS YPTB2382 NC_006155.1 2809937 2810467 D similar to Yersinia pestis YPO1699 exported protein (99.4% evalue=4.E-95); Pseudomonas aeruginosa PA4649 hypothetical protein (41.3% evalue=6.E-29); hypothetical protein 2809937..2810467 Yersinia pseudotuberculosis IP 32953 2954229 YP_070898.1 CDS YPTB2383 NC_006155.1 2810488 2811045 D similar to Yersinia pestis YPO1698 exported protein (98.9% evalue=5.E-99); Pseudomonas aeruginosa PA4650 hypothetical protein (34.8% evalue=3.E-22); hypothetical protein 2810488..2811045 Yersinia pseudotuberculosis IP 32953 2954230 YP_070899.1 CDS YPTB2385 NC_006155.1 2811932 2814379 D similar to Yersinia pestis YPO1696 probable outer membrane usher protein (99.3% evalue=0); Ralstonia solanacearum RS03043 probable signal peptide protein (30.3% evalue=4.E-94); outer membrane usher protein 2811932..2814379 Yersinia pseudotuberculosis IP 32953 2954232 YP_070900.1 CDS YPTB2386 NC_006155.1 2814585 2815574 D similar to Yersinia pestis YPO1695 membrane protein (98.7% evalue=0); Pseudomonas aeruginosa PA4653 hypothetical protein (42.1% evalue=2.E-58); hypothetical protein 2814585..2815574 Yersinia pseudotuberculosis IP 32953 2954233 YP_070901.1 CDS YPTB2387 NC_006155.1 2815782 2816021 D similar to Yersinia pestis YPO1694 conserved hypothetical protein (100% evalue=5.E-42); Salmonella typhi STY1982 conserved hypothetical protein (60.2% evalue=3.E-24); hypothetical protein 2815782..2816021 Yersinia pseudotuberculosis IP 32953 2954234 YP_070902.1 CDS YPTB2388 NC_006155.1 2816131 2816520 R similar to Yersinia pestis YPO1693 conserved hypothetical protein (99.2% evalue=3.E-70); Escherichia coli Z0414 hypothetical protein (34.9% evalue=1.E-18); hypothetical protein complement(2816131..2816520) Yersinia pseudotuberculosis IP 32953 2954235 YP_070903.1 CDS YPTB2389 NC_006155.1 2817320 2817553 R similar to Yersinia pestis YPO1690 hypothetical protein (100% evalue=2.E-37); Escherichia coli Z2040 unknown protein encoded by prophage CP-933O (34.2% evalue=5.E-09); hypothetical protein complement(2817320..2817553) Yersinia pseudotuberculosis IP 32953 2954236 YP_070904.1 CDS YPTB2390 NC_006155.1 2817708 2818964 R similar to Yersinia pestis YPO1689 lipoprotein (100% evalue=0); Mesorhizobium loti mlr2407 unknown protein (37.7% evalue=1.E-65); lipoprotein complement(2817708..2818964) Yersinia pseudotuberculosis IP 32953 2954237 YP_070905.1 CDS YPTB2391 NC_006155.1 2819357 2819605 R similar to Yersinia pestis YPO1688 hypothetical protein (100% evalue=1.E-43); hypothetical protein complement(2819357..2819605) Yersinia pseudotuberculosis IP 32953 2954238 YP_070906.1 CDS alr NC_006155.1 2820749 2821978 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 2820749..2821978 Yersinia pseudotuberculosis IP 32953 2954239 YP_070907.1 CDS YPTB2393 NC_006155.1 2822596 2823549 R similar to Yersinia pestis YPO1686 exported protein (100% evalue=1.E-176); hypothetical protein complement(2822596..2823549) Yersinia pseudotuberculosis IP 32953 2954240 YP_070908.1 CDS YPTB2394 NC_006155.1 2823649 2826291 R similar to Yersinia pestis YPO0902 surface protein (partial) (58.9% evalue=0); surface protein complement(2823649..2826291) Yersinia pseudotuberculosis IP 32953 2954241 YP_070909.1 CDS YPTB2395 NC_006155.1 2826648 2827412 R similar to Yersinia pestis YPO1683 probable N-acetylmuramoyl-L-alanine amidase (98.8% evalue=1.E-148); Pseudomonas aeruginosa PA0807 conserved hypothetical protein (61.2% evalue=1.E-85); N-acetylmuramoyl-L-alanine amidase complement(2826648..2827412) Yersinia pseudotuberculosis IP 32953 2954242 YP_070910.1 CDS cheZ NC_006155.1 2827947 2828591 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(2827947..2828591) Yersinia pseudotuberculosis IP 32953 2955330 YP_070911.1 CDS cheY NC_006155.1 2828601 2828990 R chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY complement(2828601..2828990) Yersinia pseudotuberculosis IP 32953 2955329 YP_070912.1 CDS cheB NC_006155.1 2829091 2830140 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(2829091..2830140) Yersinia pseudotuberculosis IP 32953 2955324 YP_070913.1 CDS cheR NC_006155.1 2830140 2831012 R methylates the MCP; chemotaxis methyltransferase CheR complement(2830140..2831012) Yersinia pseudotuberculosis IP 32953 2955327 YP_070914.1 CDS tap NC_006155.1 2831185 2832795 R similar to Escherichia coli b1885 tap; methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide chemoreceptor protein) (55% evalue=1.E-142); Escherichia coli JW1874 tap (55% evalue=1.E-142); methyl-accepting chemotaxis protein IV complement(2831185..2832795) Yersinia pseudotuberculosis IP 32953 2956659 YP_070915.1 CDS cheD NC_006155.1 2832980 2834653 R similar to Yersinia pestis YPO1675 cheD; methyl-accepting chemotaxis protein (99.8% evalue=0); Salmonella typhimurium STM4533 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor (68.7% evalue=0); methyl-accepting chemotaxis protein complement(2832980..2834653) Yersinia pseudotuberculosis IP 32953 2955325 YP_070916.2 CDS YPTB2402 NC_006155.1 2834894 2835574 R similar to Yersinia pestis YPO1674 lipoprotein (99.5% evalue=1.E-133); Escherichia coli ECs4631 replicase (29.9% evalue=3.E-18); hypothetical protein complement(2834894..2835574) Yersinia pseudotuberculosis IP 32953 2954243 YP_070917.1 CDS YPTB2403 NC_006155.1 2835709 2838528 R similar to Yersinia pestis YPO1673 integral membrane protein (97.3% evalue=0); Mesorhizobium loti mlr7771 unknown protein (26.6% evalue=1.E-44); hypothetical protein complement(2835709..2838528) Yersinia pseudotuberculosis IP 32953 2954244 YP_070918.1 CDS cheW NC_006155.1 2839148 2839645 R similar to Yersinia pestis YPO1667 cheW; chemotaxis protein CheW (99.3% evalue=9.E-85); Escherichia coli ECs2597 positive regulator of CheA protein activity (84.6% evalue=1.E-72); purine-binding chemotaxis protein complement(2839148..2839645) Yersinia pseudotuberculosis IP 32953 2955328 YP_070919.1 CDS cheA NC_006155.1 2839808 2841979 R chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA complement(2839808..2841979) Yersinia pseudotuberculosis IP 32953 2955323 YP_070920.1 CDS motB NC_006155.1 2841990 2843309 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(2841990..2843309) Yersinia pseudotuberculosis IP 32953 2956070 YP_070921.1 CDS motA NC_006155.1 2843306 2844193 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(2843306..2844193) Yersinia pseudotuberculosis IP 32953 2956068 YP_070922.1 CDS flhD NC_006155.1 2844982 2845332 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(2844982..2845332) Yersinia pseudotuberculosis IP 32953 2955589 YP_070923.1 CDS mgtB NC_006155.1 2846520 2849219 R similar to Yersinia pestis YPO1661 mgtB; Mg(2+) transport ATPase B (99.7% evalue=0); Pseudomonas aeruginosa PA4825 mgtA; Mg(2+) transport ATPase, P-type 2 (75.1% evalue=0); Mg(2+) transport protein B, P-type ATPase complement(2846520..2849219) Yersinia pseudotuberculosis IP 32953 2956037 YP_070924.1 CDS mgtC1 NC_006155.1 2849628 2850326 R similar to Yersinia pestis YPO1660 mgtC; Mg(2+) transport ATPase C (99.5% evalue=1.E-126); Salmonella typhi STY4022 mgtC; conserved hyopthetical protein (63.3% evalue=4.E-72); magnesium ABC transporter ATPase complement(2849628..2850326) Yersinia pseudotuberculosis IP 32953 2956038 YP_070925.1 CDS trg NC_006155.1 2851452 2853191 D similar to Salmonella typhimurium STM1626 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor (60.3% evalue=1.E-159); Escherichia coli JW1417 trg (58% evalue=1.E-158); methyl-accepting chemotaxis protein III 2851452..2853191 Yersinia pseudotuberculosis IP 32953 2956731 YP_070926.1 CDS YPTB2413 NC_006155.1 2853374 2853565 R similar to Yersinia pestis YPO1656 conserved hypothetical protein (100% evalue=1.E-30); Salmonella typhi STY2191 dsrB; DsrB protein (79.3% evalue=8.E-23); hypothetical protein complement(2853374..2853565) Yersinia pseudotuberculosis IP 32953 2954245 YP_070927.1 CDS cspC NC_006155.1 2853780 2853992 R similar to Yersinia pestis YPO1746 cspC, msmB; cold shock protein (86.3% evalue=7.E-28); cold shock protein complement(2853780..2853992) Yersinia pseudotuberculosis IP 32953 2955371 YP_070928.1 CDS lacZ NC_006155.1 2854533 2857733 D forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 2854533..2857733 Yersinia pseudotuberculosis IP 32953 2955932 YP_070929.1 CDS YPTB2416 NC_006155.1 2858140 2859150 D similar to Yersinia pestis YPO1653 probable Zinc-binding dehydrogenase (99.4% evalue=0); Brucella melitensis BMEI0302 quinone oxidoreductase (61.9% evalue=1.E-113); Zinc-binding dehydrogenase 2858140..2859150 Yersinia pseudotuberculosis IP 32953 2954246 YP_070930.1 CDS ylaC NC_006155.1 2859433 2859966 D similar to Yersinia pestis YPO1652 ylaC; membrane protein (100% evalue=2.E-98); Escherichia coli Z0570 ylaC; orf, hypothetical protein (34.4% evalue=6.E-25); hypothetical protein 2859433..2859966 Yersinia pseudotuberculosis IP 32953 2957093 YP_070931.1 CDS YPTB2418 NC_006155.1 2860491 2860940 D similar to Yersinia pestis YPO1651 AsnC-family transcriptional regulatory protein (100% evalue=2.E-79); Sinorhizobium meliloti SMc00425 transcription regulator protein (52% evalue=3.E-42); transcription regulator AsnC 2860491..2860940 Yersinia pseudotuberculosis IP 32953 2954247 YP_070932.1 CDS YPTB2419 NC_006155.1 2861029 2861931 D similar to Yersinia pestis YPO1650 hypothetical protein (99% evalue=1.E-173); Ralstonia solanacearum RS04392 hypothetical protein (41% evalue=3.E-55); hypothetical protein 2861029..2861931 Yersinia pseudotuberculosis IP 32953 2954248 YP_070933.1 CDS YPTB2420 NC_006155.1 2862234 2862437 D similar to Yersinia pestis YPO1649 conserved hypothetical protein (100% evalue=2.E-31); Salmonella typhi HCM2.0096 hypothetical protein (44.6% evalue=2.E-07); hypothetical protein 2862234..2862437 Yersinia pseudotuberculosis IP 32953 2954249 YP_070934.1 CDS YPTB2421 NC_006155.1 2862731 2864056 R similar to Yersinia pestis YPO1648 probable histidine acid phosphatase / 6-phytase (99.7% evalue=0); Escherichia coli JW0963 appA; acid phosphatase / 6-phytase (45.8% evalue=1.E-100); phosphoanhydride phosphorylase complement(2862731..2864056) Yersinia pseudotuberculosis IP 32953 2954250 YP_070935.1 CDS YPTB2422 NC_006155.1 2864588 2864995 R similar to Yersinia pestis YPO1646 conserved hypothetical protein (100% evalue=5.E-68); Escherichia coli ECs5189 hypothetical protein (62.2% evalue=8.E-40); hypothetical protein complement(2864588..2864995) Yersinia pseudotuberculosis IP 32953 2954251 YP_070936.1 CDS YPTB2423 NC_006155.1 2865131 2865988 D similar to Yersinia pestis YPO1645 conserved hypothetical protein (99.2% evalue=1.E-154); Escherichia coli ECs5190 oxidoreductase (66.3% evalue=1.E-98); hypothetical protein 2865131..2865988 Yersinia pseudotuberculosis IP 32953 2954252 YP_070937.1 CDS aer NC_006155.1 2866909 2868489 D similar to Yersinia pestis YPO1644 aer, air; methyl-accepting chemotaxis protein (99.8% evalue=0); Ralstonia solanacearum RS03168 aer, RSp1224; probable aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein (53.6% evalue=1.E-144); methyl-accepting chemotaxis protein 2866909..2868489 Yersinia pseudotuberculosis IP 32953 2955176 YP_070938.1 CDS YPTB2425 NC_006155.1 2868609 2868869 D similar to Yersinia pestis YPO1643 hypothetical protein (100% evalue=2.E-42); hypothetical protein 2868609..2868869 Yersinia pseudotuberculosis IP 32953 2954253 YP_070939.1 CDS cscR NC_006155.1 2869124 2870167 D similar to Yersinia pestis YPO1642 cscR; sucrose operon repressor LacI-family (99.4% evalue=0); Escherichia coli ECs3244 sucrose operon repressor (60% evalue=1.E-113); LacI family sucrose operon repressor 2869124..2870167 Yersinia pseudotuberculosis IP 32953 2955364 YP_070940.1 CDS icdA NC_006155.1 2870301 2871554 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2870301..2871554) Yersinia pseudotuberculosis IP 32953 2955863 YP_070941.1 CDS ymfC NC_006155.1 2871685 2872311 D similar to Yersinia pestis YPO1640 ymfC; pseudouridine synthase (100% evalue=1.E-118); Escherichia coli JW1121 ymfC; Hypothetical protein (73.4% evalue=5.E-87); pseudouridine synthase 2871685..2872311 Yersinia pseudotuberculosis IP 32953 2957094 YP_070942.1 CDS YPTB2429 NC_006155.1 2872304 2872750 D similar to Yersinia pestis YPO1639 conserved hypothetical protein (99.3% evalue=9.E-85); Escherichia coli Z1863 phosphohydrolase (75.5% evalue=1.E-64); hypothetical protein 2872304..2872750 Yersinia pseudotuberculosis IP 32953 2954254 YP_070943.1 CDS mnmA NC_006155.1 2872937 2874052 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2872937..2874052 Yersinia pseudotuberculosis IP 32953 2956738 YP_070944.1 CDS YPTB2431 NC_006155.1 2874110 2874736 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2874110..2874736 Yersinia pseudotuberculosis IP 32953 2954255 YP_070945.1 CDS purB NC_006155.1 2874797 2876167 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2874797..2876167 Yersinia pseudotuberculosis IP 32953 2956367 YP_070946.1 CDS YPTB2433 NC_006155.1 2876355 2876978 D similar to Yersinia pestis YPO1635 lipoprotein (100% evalue=1.E-117); lipoprotein 2876355..2876978 Yersinia pseudotuberculosis IP 32953 2954256 YP_070947.1 CDS phoP NC_006155.1 2877189 2877860 D response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2877189..2877860 Yersinia pseudotuberculosis IP 32953 2956268 YP_070948.1 CDS phoQ NC_006155.1 2877866 2879320 D similar to Yersinia pestis YPO1633 phoQ; sensor protein kinase (100% evalue=0); Salmonella typhi STY1270 phoQ; sensor protein PhoQ, regulator of virulence determinants (62.5% evalue=1.E-172); sensor protein PhoQ 2877866..2879320 Yersinia pseudotuberculosis IP 32953 2956269 YP_070949.1 CDS YPTB2436 NC_006155.1 2879404 2880525 D similar to Yersinia pestis YPO1632 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM1229 ycfD; cytoplasmic protein (78.7% evalue=0); hypothetical protein 2879404..2880525 Yersinia pseudotuberculosis IP 32953 2954257 YP_070950.1 CDS pepT NC_006155.1 2880758 2881993 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(2880758..2881993) Yersinia pseudotuberculosis IP 32953 2956236 YP_070951.1 CDS cobB NC_006155.1 2882323 2883159 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(2882323..2883159) Yersinia pseudotuberculosis IP 32953 2955346 YP_070952.1 CDS YPTB2439 NC_006155.1 2883208 2884122 R catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase complement(2883208..2884122) Yersinia pseudotuberculosis IP 32953 2954258 YP_070953.1 CDS lolE NC_006155.1 2884141 2885388 R part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE complement(2884141..2885388) Yersinia pseudotuberculosis IP 32953 2955960 YP_070954.1 CDS lolD NC_006155.1 2885388 2886092 R outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit complement(2885388..2886092) Yersinia pseudotuberculosis IP 32953 2955959 YP_070955.1 CDS lolC NC_006155.1 2886085 2887287 R part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC complement(2886085..2887287) Yersinia pseudotuberculosis IP 32953 2955958 YP_070956.1 CDS mfd NC_006155.1 2887557 2891003 D similar to Yersinia pestis YPO1625 mfd; transcription-repair coupling factor (99.6% evalue=0); Escherichia coli ECs1492 transcription-repair coupling factor (80.8% evalue=0); transcription-repair coupling factor 2887557..2891003 Yersinia pseudotuberculosis IP 32953 2956031 YP_070957.1 CDS ycfJ NC_006155.1 2891242 2891781 R similar to Yersinia pestis YPO1624 ycfJ; exported protein (99.4% evalue=4.E-98); Escherichia coli JW1096 ycfJ; Hypothetical protein (80.3% evalue=4.E-84); hypothetical protein complement(2891242..2891781) Yersinia pseudotuberculosis IP 32953 2956981 YP_070958.1 CDS YPTB2445 NC_006155.1 2892092 2892505 R similar to Yersinia pestis YPO1620 hypothetical protein (100% evalue=7.E-76); hypothetical protein complement(2892092..2892505) Yersinia pseudotuberculosis IP 32953 2954259 YP_070959.1 CDS YPTB2446 NC_006155.1 2892513 2893217 R similar to Yersinia pestis YPO3066 hypothetical protein (53.8% evalue=2.E-47); hypothetical protein complement(2892513..2893217) Yersinia pseudotuberculosis IP 32953 2954260 YP_070960.1 CDS ndh NC_006155.1 2893802 2895106 R similar to Yersinia pestis YPO1617 ndh; NADH dehydrogenase (99.7% evalue=0); Escherichia coli JW1095 ndh; NADH dehydrogenase (82.2% evalue=0); NADH dehydrogenase complement(2893802..2895106) Yersinia pseudotuberculosis IP 32953 2956133 YP_070961.1 CDS YPTB2448 NC_006155.1 2895480 2896022 R similar to Yersinia pestis YPO1616 conserved hypothetical protein (100% evalue=1.E-105); Salmonella typhi STY1250 conserved hypothetical protein (80.5% evalue=2.E-86); hypothetical protein complement(2895480..2896022) Yersinia pseudotuberculosis IP 32953 2954261 YP_070962.1 CDS ycfO NC_006155.1 2896150 2897181 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(2896150..2897181) Yersinia pseudotuberculosis IP 32953 2956983 YP_070963.1 CDS YPTB2450 NC_006155.1 2897252 2898118 R similar to Yersinia pestis YPO1614 conserved hypothetical protein (99.6% evalue=1.E-159); Escherichia coli ECs1484 beta-glucosidase (37.4% evalue=9.E-34); hypothetical protein complement(2897252..2898118) Yersinia pseudotuberculosis IP 32953 2954262 YP_070964.1 CDS YPTB2451 NC_006155.1 2898099 2898674 R similar to Yersinia pestis YPO1613 lipoprotein (99.4% evalue=1.E-103); Salmonella typhimurium STM1207 ycfM; outer membrane lipoprotein (49.2% evalue=3.E-48); lipoprotein complement(2898099..2898674) Yersinia pseudotuberculosis IP 32953 2954263 YP_070965.1 CDS ycfL NC_006155.1 2898715 2899104 R similar to Yersinia pestis YPO1612 ycfL; lipoprotein (100% evalue=7.E-68); Escherichia coli ECs1482 hypothetical protein (46.3% evalue=1.E-21); lipoprotein complement(2898715..2899104) Yersinia pseudotuberculosis IP 32953 2956982 YP_070966.1 CDS YPTB2453 NC_006155.1 2899139 2899492 R similar to Yersinia pestis YPO1611 conserved hypothetical protein (100% evalue=9.E-63); Salmonella typhi STY1245 protein kinase C inhibitor (86.3% evalue=4.E-55); purine nucleoside phosphoramidase complement(2899139..2899492) Yersinia pseudotuberculosis IP 32953 2954264 YP_070967.1 CDS aroE NC_006155.1 2899666 2900484 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(2899666..2900484) Yersinia pseudotuberculosis IP 32953 2954265 YP_070968.1 CDS YPTB2455 NC_006155.1 2900644 2900910 D similar to Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (36.9% evalue=1.E-07); Escherichia coli Z2978 replication protein for prophage CP-933T (37.3% evalue=1.E-07); phage replication protein gene fragment 2900644..2900910 Yersinia pseudotuberculosis IP 32953 2954266 YP_070969.1 CDS YPTB2456 NC_006155.1 2901382 2901567 D hypothetical protein 2901382..2901567 Yersinia pseudotuberculosis IP 32953 2954267 YP_070970.1 CDS YPTB2457 NC_006155.1 2901687 2902217 R hypothetical protein complement(2901687..2902217) Yersinia pseudotuberculosis IP 32953 2954268 YP_070971.1 CDS YPTB2458 NC_006155.1 2902330 2903445 R similar to Pyrococcus furiosus C2133PF1167 smc-like (22% evalue=4.E-07); C. perfringens CPE1884 hypothetical protein (23.1% evalue=4.E-07); hypothetical protein complement(2902330..2903445) Yersinia pseudotuberculosis IP 32953 2954269 YP_070972.1 CDS YPTB2459 NC_006155.1 2903918 2905096 R hypothetical protein complement(2903918..2905096) Yersinia pseudotuberculosis IP 32953 2954270 YP_070973.1 CDS YPTB2460 NC_006155.1 2905610 2906083 R similar to Salmonella typhi STY4628 probable capsid portal protein (52.4% evalue=7.E-41); Ralstonia solanacearum RS03510 probable bacteriophage protein (59.1% evalue=2.E-41); capsid portal protein complement(2905610..2906083) Yersinia pseudotuberculosis IP 32953 2954271 YP_070974.1 CDS YPTB2461 NC_006155.1 2906112 2906390 D hypothetical protein 2906112..2906390 Yersinia pseudotuberculosis IP 32953 2954272 YP_070975.1 CDS YPTB2462 NC_006155.1 2906975 2907220 D similar to Yersinia pestis YPO1877 hypothetical protein (38.8% evalue=9.E-08); hypothetical protein 2906975..2907220 Yersinia pseudotuberculosis IP 32953 2954273 YP_070976.1 CDS ptsG NC_006155.1 2907773 2909206 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC complement(2907773..2909206) Yersinia pseudotuberculosis IP 32953 2956360 YP_070977.1 CDS YPTB2464 NC_006155.1 2909512 2910321 R similar to Yersinia pestis YPO1607 deoxyribonuclease (100% evalue=1.E-153); Salmonella typhimurium STM1202 ycfH; deoxyribonuclease (77.5% evalue=1.E-112); metallodependent hydrolase complement(2909512..2910321) Yersinia pseudotuberculosis IP 32953 2954274 YP_070978.1 CDS holB NC_006155.1 2910336 2911358 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(2910336..2911358) Yersinia pseudotuberculosis IP 32953 2955819 YP_070979.1 CDS tmk NC_006155.1 2911358 2911996 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2911358..2911996) Yersinia pseudotuberculosis IP 32953 2956709 YP_070980.1 CDS yceG NC_006155.1 2911986 2913011 R similar to Yersinia pestis YPO1604 yceG; exported protein (99.4% evalue=0); Escherichia coli b1097 yceG; hypothetical 38.2 kD protein in pABC-holB intergenic region (63.1% evalue=1.E-117); hypothetical protein complement(2911986..2913011) Yersinia pseudotuberculosis IP 32953 2956978 YP_070981.1 CDS pabC NC_006155.1 2913300 2914106 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(2913300..2914106) Yersinia pseudotuberculosis IP 32953 2956205 YP_070982.1 CDS fabF NC_006155.1 2914469 2915710 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(2914469..2915710) Yersinia pseudotuberculosis IP 32953 2955516 YP_070983.1 CDS acpP NC_006155.1 2915805 2916041 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2915805..2916041) Yersinia pseudotuberculosis IP 32953 2955168 YP_070984.1 CDS fabG NC_006155.1 2916195 2916929 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2916195..2916929) Yersinia pseudotuberculosis IP 32953 2955518 YP_070985.1 CDS fabD NC_006155.1 2916943 2917872 R similar to Yersinia pestis YPO1598 fabD, tfpA; malonyl CoA-acyl carrier protein transacylase (100% evalue=1.E-172); Salmonella typhimurium STM1194 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase (79.8% evalue=1.E-139); ACP S-malonyltransferase complement(2916943..2917872) Yersinia pseudotuberculosis IP 32953 2955515 YP_070986.1 CDS fabH NC_006155.1 2917910 2918860 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2917910..2918860) Yersinia pseudotuberculosis IP 32953 2955519 YP_070987.1 CDS plsX NC_006155.1 2918867 2919901 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2918867..2919901) Yersinia pseudotuberculosis IP 32953 2956279 YP_070988.1 CDS rpmF NC_006155.1 2919935 2920102 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2919935..2920102) Yersinia pseudotuberculosis IP 32953 2956515 YP_070989.1 CDS YPTB2476 NC_006155.1 2920115 2920639 R similar to Yersinia pestis YPO1594 conserved hypothetical protein (100% evalue=2.E-95); Escherichia coli JW1074 yceD; Hypothetical protein (79.6% evalue=3.E-75); hypothetical protein complement(2920115..2920639) Yersinia pseudotuberculosis IP 32953 2954275 YP_070990.2 CDS maf NC_006155.1 2920781 2921377 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2920781..2921377 Yersinia pseudotuberculosis IP 32953 2954276 YP_070991.1 CDS rluC NC_006155.1 2921500 2922462 R catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C complement(2921500..2922462) Yersinia pseudotuberculosis IP 32953 2956463 YP_070992.1 CDS rne NC_006155.1 2923037 2926729 D bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E 2923037..2926729 Yersinia pseudotuberculosis IP 32953 2956469 YP_070993.1 CDS YPTB2480 NC_006155.1 2926777 2926893 R hypothetical protein complement(2926777..2926893) Yersinia pseudotuberculosis IP 32953 2954277 YP_070994.1 CDS YPTB2481 NC_006155.1 2926987 2927274 R similar to Yersinia pestis YPO1588 conserved hypothetical protein (100% evalue=9.E-48); Neisseria meningitidis NMB1575 conserved hypothetical protein (38.7% evalue=2.E-17); hypothetical protein complement(2926987..2927274) Yersinia pseudotuberculosis IP 32953 2954278 YP_070995.1 CDS pyrC NC_006155.1 2927509 2928555 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2927509..2928555 Yersinia pseudotuberculosis IP 32953 2956385 YP_070996.1 CDS dinI NC_006155.1 2928868 2929113 D similar to Yersinia pestis YPO1586 dinI; DNA-damage-inducible protein I (100% evalue=7.E-40); Escherichia coli b1061 dinI; DNA-damage-inducible protein I (62.9% evalue=2.E-22); DNA damage-inducible protein I 2928868..2929113 Yersinia pseudotuberculosis IP 32953 2955459 YP_070997.1 CDS bssS NC_006155.1 2929619 2929873 D BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 2929619..2929873 Yersinia pseudotuberculosis IP 32953 2956980 YP_070998.1 CDS solA NC_006155.1 2930124 2931239 D catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 2930124..2931239 Yersinia pseudotuberculosis IP 32953 2956622 YP_070999.1 CDS YPTB2486 NC_006155.1 2931506 2932090 D similar to Yersinia pestis YPO2449 LuxR-family regulatory protein (95% evalue=1.E-108); Salmonella typhimurium STM4337 ecnR; bacterial regulatory protein, luxR family (29.4% evalue=8.E-13); LuxR family transcriptional regulator 2931506..2932090 Yersinia pseudotuberculosis IP 32953 2954279 YP_071000.1 CDS tqsA NC_006155.1 2932662 2933720 R transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; transporter complement(2932662..2933720) Yersinia pseudotuberculosis IP 32953 2954280 YP_071001.1 CDS YPTB2488 NC_006155.1 2933869 2934936 R similar to Yersinia pestis YPO2451 conserved hypothetical protein (100% evalue=0); Escherichia coli JW1042 yceA; Hypothetical protein (ORF39.9) (73.8% evalue=1.E-158); hypothetical protein complement(2933869..2934936) Yersinia pseudotuberculosis IP 32953 2954281 YP_071002.1 CDS YPTB2489 NC_006155.1 2935295 2935699 R similar to Yersinia pestis YPO2453 membrane protein (99.1% evalue=3.E-64); hypothetical protein complement(2935295..2935699) Yersinia pseudotuberculosis IP 32953 2954282 YP_071003.1 CDS htrB NC_006155.1 2936394 2937314 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2936394..2937314 Yersinia pseudotuberculosis IP 32953 2955847 YP_071004.1 CDS yceE NC_006155.1 2938011 2939549 D similar to Listeria innocua lin0564 similar to di-tripeptide transporter (37.6% evalue=6.E-84); Bacillus subtilis BG12027 yclF; di-tripeptide transport system permease (36.2% evalue=2.E-89); proton dependent di-tripeptide transporter 2938011..2939549 Yersinia pseudotuberculosis IP 32953 2956977 YP_071005.1 CDS YPTB2492 NC_006155.1 2939796 2940128 R similar to Escherichia coli ECs1428 hypothetical protein (64.8% evalue=6.E-27); Escherichia coli Z1685 yceK; orf; Unknown function (64.8% evalue=6.E-27); hypothetical protein complement(2939796..2940128) Yersinia pseudotuberculosis IP 32953 2954283 YP_071006.1 CDS mdoH NC_006155.1 2940161 2942770 R necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH complement(2940161..2942770) Yersinia pseudotuberculosis IP 32953 2956010 YP_071007.1 CDS mdoG NC_006155.1 2942763 2944349 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(2942763..2944349) Yersinia pseudotuberculosis IP 32953 2956009 YP_071008.1 CDS YPTB2496 NC_006155.1 2945778 2946023 D hypothetical protein 2945778..2946023 Yersinia pseudotuberculosis IP 32953 2954285 YP_071009.1 CDS YPTB2497 NC_006155.1 2946367 2948094 D the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 2946367..2948094 Yersinia pseudotuberculosis IP 32953 2954286 YP_071010.1 CDS YPTB2498 NC_006155.1 2948226 2949152 R similar to Yersinia pestis YPO2455 membrane protein (99% evalue=1.E-119); Salmonella typhimurium STM4395 yifZ; permease (71.9% evalue=1.E-119); DMT superfamliy metabolite exporter complement(2948226..2949152) Yersinia pseudotuberculosis IP 32953 2954287 YP_071011.1 CDS ypsI NC_006155.1 2949583 2950227 D similar to Yersinia pestis YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI (100% evalue=1.E-121); N-acylhomoserine lactone synthase 2949583..2950227 Yersinia pseudotuberculosis IP 32953 2957108 YP_071012.1 CDS ypsR NC_006155.1 2950220 2950957 R similar to Yersinia pestis YPO2457 ypeR; quorum-sensing transcriptional activator YpeR (100% evalue=1.E-139); quorum-sensing transcriptional activator YpeR complement(2950220..2950957) Yersinia pseudotuberculosis IP 32953 2957109 YP_071013.1 CDS YPTB2501 NC_006155.1 2951375 2952301 R similar to Yersinia pestis YPO2458 LysR-family transcriptional regulator (99.3% evalue=1.E-174); Caulobacter crescentus CC1117 transcriptional regulator, LysR family (34.1% evalue=5.E-33); LysR family transcriptional regulator complement(2951375..2952301) Yersinia pseudotuberculosis IP 32953 2954288 YP_071014.1 CDS YPTB2502 NC_006155.1 2952749 2954107 D similar to Yersinia pestis YPO2459 transporter protein (99.7% evalue=0); Escherichia coli JW2741 ygcS; Hypothetical metabolite transport protein (62.1% evalue=1.E-157); MFS superfamily sugar transporter 2952749..2954107 Yersinia pseudotuberculosis IP 32953 2954289 YP_071015.1 CDS YPTB2503 NC_006155.1 2954154 2954657 D similar to Yersinia pestis YPO2460 conserved hypothetical protein (99.4% evalue=2.E-93); A. fulgidus AF1305 hps-2; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (32.7% evalue=8.E-23); hypothetical protein 2954154..2954657 Yersinia pseudotuberculosis IP 32953 2954290 YP_071016.1 CDS YPTB2504 NC_006155.1 2954668 2955687 D similar to Yersinia pestis YPO2461 oxidoreductase (99.4% evalue=0); Listeria monocytogenes lmo2005 similar to oxidoreductase (45.3% evalue=1.E-72); oxidoreductase 2954668..2955687 Yersinia pseudotuberculosis IP 32953 2954291 YP_071017.1 CDS YPTB2505 NC_006155.1 2955765 2956319 R similar to Yersinia pestis YPO2462 conserved hypothetical protein (100% evalue=1.E-102); Pasteurella multocida PM0308 unknown (32.6% evalue=3.E-17); hypothetical protein complement(2955765..2956319) Yersinia pseudotuberculosis IP 32953 2954292 YP_071018.1 CDS YPTB2506 NC_006155.1 2956330 2957334 R similar to Yersinia pestis YPO2463 conserved hypothetical protein (99.7% evalue=0); Pasteurella multocida PM0307 unknown (55% evalue=3.E-94); hypothetical protein complement(2956330..2957334) Yersinia pseudotuberculosis IP 32953 2954293 YP_071019.1 CDS YPTB2507 NC_006155.1 2957352 2958302 R similar to Yersinia pestis YPO2464 conserved hypothetical protein (98.1% evalue=0); Pasteurella multocida PM0306 unknown (32.8% evalue=2.E-34); hypothetical protein complement(2957352..2958302) Yersinia pseudotuberculosis IP 32953 2954294 YP_071020.1 CDS YPTB2508 NC_006155.1 2958299 2959645 R similar to Yersinia pestis YPO2465 conserved hypothetical protein (81.2% evalue=0); Pasteurella multocida PM0305 unknown (26.9% evalue=7.E-30); hypothetical protein complement(2958299..2959645) Yersinia pseudotuberculosis IP 32953 2954295 YP_071021.1 CDS YPTB2509 NC_006155.1 2959801 2963091 R similar to Yersinia pestis YPO2467 conserved hypothetical protein (99.2% evalue=0); Pasteurella multocida PM0312 unknown (42.7% evalue=0); hypothetical protein complement(2959801..2963091) Yersinia pseudotuberculosis IP 32953 2954296 YP_071022.1 CDS YPTB2510 NC_006155.1 2963088 2964074 R similar to Yersinia pestis YPO2468 conserved hypothetical protein (99% evalue=0); Pasteurella multocida PM0311 unknown (57.7% evalue=1.E-103); hypothetical protein complement(2963088..2964074) Yersinia pseudotuberculosis IP 32953 2954297 YP_071023.1 CDS YPTB2511 NC_006155.1 2965756 2967000 D similar to Yersinia pestis YPO2470 membrane protein (99.7% evalue=0); Salmonella typhi STY0618 ybdG; membrane protein (63.1% evalue=1.E-150); mechanosensitive ion channel protein MscS 2965756..2967000 Yersinia pseudotuberculosis IP 32953 2954298 YP_071024.1 CDS YPTB2512 NC_006155.1 2967559 2968833 R similar to Yersinia pestis YPO2471 exported protein (99.7% evalue=0); hypothetical protein complement(2967559..2968833) Yersinia pseudotuberculosis IP 32953 2954299 YP_071025.1 CDS YPTB2513 NC_006155.1 2968872 2969987 R similar to Yersinia pestis YPO2472 exported protein (99.7% evalue=0); hypothetical protein complement(2968872..2969987) Yersinia pseudotuberculosis IP 32953 2954300 YP_071026.1 CDS YPTB2514 NC_006155.1 2970110 2971048 R similar to Yersinia pestis YPO2473 hypothetical protein (97.7% evalue=0); Listeria monocytogenes lmo0863 lmo0863 (47.3% evalue=3.E-70); hypothetical protein complement(2970110..2971048) Yersinia pseudotuberculosis IP 32953 2954301 YP_071027.1 CDS YPTB2515 NC_006155.1 2971075 2972130 R similar to Yersinia pestis YPO2474 conserved hypothetical protein (99.7% evalue=0); Listeria monocytogenes lmo0864 lmo0864 (47.1% evalue=1.E-92); hypothetical protein complement(2971075..2972130) Yersinia pseudotuberculosis IP 32953 2954302 YP_071028.1 CDS YPTB2516 NC_006155.1 2972277 2973101 R similar to Yersinia pestis YPO2475 sugar ABC transporter, permease (100% evalue=1.E-152); Thermotoga maritima TM1853 multiple sugar transport system permease (52.9% evalue=4.E-86); sugar ABC transporter permease complement(2972277..2973101) Yersinia pseudotuberculosis IP 32953 2954303 YP_071029.1 CDS YPTB2517 NC_006155.1 2973102 2973977 R similar to Yersinia pestis YPO2476 sugar ABC transporter, permease (99.3% evalue=1.E-164); Thermotoga maritima TM1854 multiple sugar transport system permease (54.5% evalue=9.E-96); sugar ABC transporter permease complement(2973102..2973977) Yersinia pseudotuberculosis IP 32953 2954304 YP_071030.1 CDS YPTB2518 NC_006155.1 2974086 2975372 R similar to Yersinia pestis YPO2477 solute-binding protein (99.7% evalue=0); Thermotoga maritima TM1855 multiple sugar transport system substrate-binding protein (50% evalue=1.E-114); sugar ABC transporter substrate-binding protein complement(2974086..2975372) Yersinia pseudotuberculosis IP 32953 2954305 YP_071031.1 CDS YPTB2519 NC_006155.1 2975644 2976684 D similar to Yersinia pestis YPO2478 LacI-family transcriptional regulatory protein (100% evalue=0); Mycobacterium tuberculosis Rv3575c hypothetical protein Rv3575c (34.2% evalue=6.E-46); LacI family transcriptional regulator 2975644..2976684 Yersinia pseudotuberculosis IP 32953 2954306 YP_071032.1 CDS manB NC_006155.1 2976701 2978089 D similar to Yersinia pestis YPO2479 manB, rfbK, rfbK2; phosphomannomutase (100% evalue=0); Salmonella typhimurium STM2104 cpsG; phosphomannomutase in colanic acid gene cluster (61.8% evalue=1.E-163); phosphomannomutase 2976701..2978089 Yersinia pseudotuberculosis IP 32953 2955995 YP_071033.1 CDS mtlK NC_006155.1 2978189 2979268 D similar to Yersinia pestis YPO2480 mtlK; mannitol transport ATP-binding protein (99.7% evalue=0); Agrobacterium tumefaciens AGR_L_3324 lacK; lactose transport ATP-binding protein LacK (49.7% evalue=9.E-93); sugar ABC transporter ATP-binding protein 2978189..2979268 Yersinia pseudotuberculosis IP 32953 2956091 YP_071034.1 CDS YPTB2522 NC_006155.1 2979533 2980063 R similar to Yersinia pestis YPO2481 exported protein (100% evalue=4.E-95); hypothetical protein complement(2979533..2980063) Yersinia pseudotuberculosis IP 32953 2954307 YP_071035.1 CDS YPTB2525 NC_006155.1 2982148 2982399 R similar to Yersinia pestis YPO2488 hypothetical protein (97.5% evalue=1.E-43); hypothetical protein complement(2982148..2982399) Yersinia pseudotuberculosis IP 32953 2954310 YP_071036.1 CDS YPTB2526 NC_006155.1 2982644 2983153 R similar to Yersinia pestis YPO2489 conserved hypothetical protein (100% evalue=3.E-96); Neisseria meningitidis NMB0222 hypothetical protein (36.5% evalue=9.E-27); hypothetical protein complement(2982644..2983153) Yersinia pseudotuberculosis IP 32953 2954311 YP_071037.2 CDS YPTB2527 NC_006155.1 2983155 2990750 R similar to Yersinia pestis YPO2490 hemolysin (99.2% evalue=0); hemolysin complement(2983155..2990750) Yersinia pseudotuberculosis IP 32953 2954312 YP_071038.1 CDS YPTB2528 NC_006155.1 2990905 2992593 R similar to Yersinia pestis YPO2491 hemolysin activator protein (99.8% evalue=0); hemolysin activator/exporter complement(2990905..2992593) Yersinia pseudotuberculosis IP 32953 2954313 YP_071039.1 CDS YPTB2529 NC_006155.1 2993248 2994213 R similar to Yersinia pestis YPO2492 dioxygenase beta subunit (99.6% evalue=0); Escherichia coli JW1792 yeaX; dioxygenase alpha subunit (58.8% evalue=1.E-105); dioxygenase subunit beta complement(2993248..2994213) Yersinia pseudotuberculosis IP 32953 2954314 YP_071040.1 CDS YPTB2530 NC_006155.1 2994309 2995433 R similar to Yersinia pestis YPO2493 dioxygenase alpha subunit (100% evalue=0); Escherichia coli JW1791 yeaW; dioxygenase alpha subunit (82.6% evalue=0); dioxygenase subunit alpha complement(2994309..2995433) Yersinia pseudotuberculosis IP 32953 2954315 YP_071041.2 CDS YPTB2531 NC_006155.1 2995550 2997016 R member of the betaine, carnitine, choline transporter (BCCT) family; unknown function; transporter complement(2995550..2997016) Yersinia pseudotuberculosis IP 32953 2954316 YP_071042.1 CDS YPTB2532 NC_006155.1 2997799 2998884 R similar to Yersinia pestis YPO2496 tartrate dehydrogenase (100% evalue=0); Escherichia coli b1800 yeaU; probable tartrate dehydrogenase (81.3% evalue=1.E-174); tartrate dehydrogenase complement(2997799..2998884) Yersinia pseudotuberculosis IP 32953 2954317 YP_071043.1 CDS YPTB2533 NC_006155.1 2998987 2999928 D similar to Yersinia pestis YPO2497 LlysR-family transcriptional regulatory protein (99.6% evalue=1.E-179); Escherichia coli Z2842 yeaT; transcriptional regulator LYSR-type (74.5% evalue=1.E-130); LysR family transcriptional regulator 2998987..2999928 Yersinia pseudotuberculosis IP 32953 2954318 YP_071044.1 CDS YPTB2534 NC_006155.1 3000300 3001304 D similar to Yersinia pestis YPO2498 LacI-family transcriptional regulatory protein (99.4% evalue=0); Escherichia coli ECs4695 regulator for rbs operon (27.7% evalue=9.E-28); LacI family transcriptional regulatory protein 3000300..3001304 Yersinia pseudotuberculosis IP 32953 2954319 YP_071045.1 CDS YPTB2535 NC_006155.1 3001437 3002429 R similar to Yersinia pestis YPO2499 rbsC; sugar transport system, permease (100% evalue=0); Agrobacterium tumefaciens AGR_L_1078 ribose ABC transporter (permease) (59% evalue=3.E-99); sugar (sorbitol) ABC transporter permease complement(3001437..3002429) Yersinia pseudotuberculosis IP 32953 2954320 YP_071046.1 CDS YPTB2536 NC_006155.1 3002426 3003916 R similar to Yersinia pestis YPO2500 rbsA; sugar transport system, ATP-binding protein (98.7% evalue=0); Agrobacterium tumefaciens Atu4321 rbsA; ABC transporter, nucleotide binding/ATPase [ribose] (58.3% evalue=1.E-152); sugar (sorbitol) ABC transporter ATP-binding protein complement(3002426..3003916) Yersinia pseudotuberculosis IP 32953 2954321 YP_071047.1 CDS YPTB2537 NC_006155.1 3003973 3004890 R similar to Yersinia pestis YPO2501 rbsB; sugar binding protein precursor (99.3% evalue=1.E-166); Agrobacterium tumefaciens Atu4320 rbsB; ABC transporter, substrate binding protein [ribose] (59.4% evalue=3.E-97); sugar ABC transporter substrate-binding protein complement(3003973..3004890) Yersinia pseudotuberculosis IP 32953 2954322 YP_071048.1 CDS gutB NC_006155.1 3005065 3006291 R similar to Yersinia pestis YPO3352 ydjJ; Zinc-binding dehydrogenase (52% evalue=1.E-110); sorbitol dehydrogenase complement(3005065..3006291) Yersinia pseudotuberculosis IP 32953 2955765 YP_071049.1 CDS YPTB2539 NC_006155.1 3006939 3007601 R similar to Yersinia pestis YPO2504 hypothetical protein (27.2% evalue=4.E-11); hypothetical protein complement(3006939..3007601) Yersinia pseudotuberculosis IP 32953 2954323 YP_071050.1 CDS YPTB2540 NC_006155.1 3007784 3008356 R similar to Yersinia pestis YPO2504 hypothetical protein (61.7% evalue=2.E-56); hypothetical protein complement(3007784..3008356) Yersinia pseudotuberculosis IP 32953 2954324 YP_071051.1 CDS YPTB2541 NC_006155.1 3008594 3009532 R similar to Yersinia pestis YPO2505 membrane protein (99% evalue=1.E-176); Sinorhizobium meliloti SMa0683 hypothetical protein (40.2% evalue=6.E-64); CDF family Co+2/Zn+2/Cd+2 efflux protein complement(3008594..3009532) Yersinia pseudotuberculosis IP 32953 2954325 YP_071052.1 CDS ompX NC_006155.1 3009848 3010372 R OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X complement(3009848..3010372) Yersinia pseudotuberculosis IP 32953 2956193 YP_071053.1 CDS YPTB2543 NC_006155.1 3010777 3011664 D similar to Yersinia pestis YPO2507 membrane protein (100% evalue=1.E-162); Salmonella typhimurium STM0832 ybiF; permease (71.4% evalue=1.E-115); threonine and homoserine efflux system 3010777..3011664 Yersinia pseudotuberculosis IP 32953 2954326 YP_071054.1 CDS YPTB2544 NC_006155.1 3011680 3012177 D similar to Yersinia pestis YPO2508 conserved hypothetical protein (100% evalue=1.E-93); Anabaena all4397 acetyltransferase (32.5% evalue=6.E-18); hypothetical protein 3011680..3012177 Yersinia pseudotuberculosis IP 32953 2954327 YP_071055.1 CDS tam NC_006155.1 3012200 3012976 D catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 3012200..3012976 Yersinia pseudotuberculosis IP 32953 2956658 YP_071056.1 CDS dps NC_006155.1 3013234 3013737 D binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 3013234..3013737 Yersinia pseudotuberculosis IP 32953 2955484 YP_071057.1 CDS YPTB2547 NC_006155.1 3014057 3015184 D similar to Yersinia pestis YPO2511 exported protein (100% evalue=0); Listeria innocua lin2536 lin2536 (27.1% evalue=2.E-07); hypothetical protein 3014057..3015184 Yersinia pseudotuberculosis IP 32953 2954328 YP_071058.1 CDS glnH NC_006155.1 3015753 3016496 D similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 3015753..3016496 Yersinia pseudotuberculosis IP 32953 2955699 YP_071059.1 CDS glnP NC_006155.1 3016531 3017187 D similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3016531..3017187 Yersinia pseudotuberculosis IP 32953 2955701 YP_071060.1 CDS glnQ NC_006155.1 3017184 3017906 D similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 3017184..3017906 Yersinia pseudotuberculosis IP 32953 2955702 YP_071061.1 CDS YPTB2551 NC_006155.1 3018134 3019438 R similar to Yersinia pestis YPO2515 chemotactic transducer (98.5% evalue=0); Pseudomonas aeruginosa PA1423 probable chemotaxis transducer (41.5% evalue=7.E-90); chemotactic transducer complement(3018134..3019438) Yersinia pseudotuberculosis IP 32953 2954329 YP_071062.1 CDS YPTB2552 NC_006155.1 3019893 3020159 R hypothetical protein complement(3019893..3020159) Yersinia pseudotuberculosis IP 32953 2954330 YP_071063.1 CDS YPTB2553 NC_006155.1 3020223 3021233 R similar to Yersinia pestis YPO2519 conserved hypothetical protein (99.7% evalue=0); Escherichia coli JW0792 ybiN; Hypothetical protein (57% evalue=1.E-95); SAM-dependent methyltransferase complement(3020223..3021233) Yersinia pseudotuberculosis IP 32953 2954331 YP_071064.1 CDS YPTB2554 NC_006155.1 3021537 3021797 D similar to Yersinia pestis YPO2521 exported protein (100% evalue=8.E-41); Salmonella typhimurium STM0823 ybiJ; periplasmic protein (59.3% evalue=6.E-21); hypothetical protein 3021537..3021797 Yersinia pseudotuberculosis IP 32953 2954332 YP_071065.1 CDS ybiB NC_006155.1 3022179 3023138 R similar to Yersinia pestis YPO2522 ybiB; glycosyl transferase (99.3% evalue=1.E-178); Salmonella typhimurium STM0822 ybiB; transferase (60.1% evalue=1.E-103); glycosyl transferase family protein complement(3022179..3023138) Yersinia pseudotuberculosis IP 32953 2956966 YP_071066.1 CDS menE NC_006155.1 3023204 3024619 R similar to Yersinia pestis YPO2523 menE; O-succinylbenzoic acid--CoA ligase (99.5% evalue=0); Salmonella typhi STY2535 menE; O-succinylbenzoic acid-CoA ligase (57.2% evalue=1.E-144); O-succinylbenzoic acid--CoA ligase complement(3023204..3024619) Yersinia pseudotuberculosis IP 32953 2956015 YP_071067.1 CDS menC NC_006155.1 3024607 3025578 R catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase complement(3024607..3025578) Yersinia pseudotuberculosis IP 32953 2956013 YP_071068.1 CDS menB NC_006155.1 3025578 3026435 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(3025578..3026435) Yersinia pseudotuberculosis IP 32953 2956012 YP_071069.1 CDS YPTB2559 NC_006155.1 3026449 3027267 R catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase complement(3026449..3027267) Yersinia pseudotuberculosis IP 32953 2954333 YP_071070.1 CDS menD NC_006155.1 3027264 3028967 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(3027264..3028967) Yersinia pseudotuberculosis IP 32953 2956014 YP_071071.2 CDS menF NC_006155.1 3029195 3030562 R synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase complement(3029195..3030562) Yersinia pseudotuberculosis IP 32953 2956016 YP_071072.1 CDS YPTB2562 NC_006155.1 3031107 3031751 R similar to Yersinia pestis YPO2530 conserved hypothetical protein (100% evalue=1.E-122); hypothetical protein complement(3031107..3031751) Yersinia pseudotuberculosis IP 32953 2954334 YP_071073.1 CDS elaB NC_006155.1 3032306 3032614 R similar to Yersinia pestis YPO2531 elaB; membrane protein (100% evalue=3.E-54); Escherichia coli b2266 elaB; elaB protein (50% evalue=2.E-21); hypothetical protein complement(3032306..3032614) Yersinia pseudotuberculosis IP 32953 2955500 YP_071074.1 CDS YPTB2564 NC_006155.1 3033266 3033478 R similar to Yersinia pestis YPO2532 hypothetical protein, 100 % identical.; hypothetical protein complement(3033266..3033478) Yersinia pseudotuberculosis IP 32953 2954335 YP_071075.1 CDS edd NC_006155.1 3033544 3035460 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3033544..3035460) Yersinia pseudotuberculosis IP 32953 2955496 YP_071076.1 CDS YPTB2566 NC_006155.1 3035470 3035985 R similar to Yersinia pestis YPO2534 conserved hypothetical protein (99.4% evalue=7.E-93); Sinorhizobium meliloti SMc03110 conserved hypothetical protein (40.1% evalue=6.E-31); hypothetical protein complement(3035470..3035985) Yersinia pseudotuberculosis IP 32953 2954336 YP_071077.1 CDS YPTB2567 NC_006155.1 3036015 3037331 R similar to Yersinia pestis YPO2535 sugar transporter (99.5% evalue=0); Pseudomonas aeruginosa PA2262 probable 2-ketogluconate transporter (32.6% evalue=1.E-64); 2-ketogluconate transporter complement(3036015..3037331) Yersinia pseudotuberculosis IP 32953 2954337 YP_071078.1 CDS YPTB2568 NC_006155.1 3037877 3038827 R similar to Yersinia pestis YPO2536 D-isomer specific 2-hydroxyacid dehydrogenase family protein (98.7% evalue=1.E-173); Agrobacterium tumefaciens AGR_L_379 D-isomer specific 2-hydroxyacid dehydrogenase; 59386-58329 (44.9% evalue=7.E-73); D-isomer specific 2-hydroxyacid dehydrogenase family protein complement(3037877..3038827) Yersinia pseudotuberculosis IP 32953 2954338 YP_071079.1 CDS YPTB2569 NC_006155.1 3039291 3040283 R similar to Yersinia pestis YPO2537 LacI-family transcriptional regulatory protein (99.3% evalue=0); Salmonella typhimurium STM4481 idnR; L-idonate regulator (GalR/LacI family) (50% evalue=2.E-91); LacI family transcriptional regulatory protein complement(3039291..3040283) Yersinia pseudotuberculosis IP 32953 2954339 YP_071080.1 CDS YPTB2570 NC_006155.1 3040769 3042073 D similar to Yersinia pestis YPO2538 lipoprotein (98.8% evalue=0); Escherichia coli JW1486 hypothetical protein (59.7% evalue=1.E-154); lipoprotein 3040769..3042073 Yersinia pseudotuberculosis IP 32953 2954340 YP_071081.1 CDS idnO NC_006155.1 3042812 3043576 D Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 3042812..3043576 Yersinia pseudotuberculosis IP 32953 2955866 YP_071082.1 CDS idnK NC_006155.1 3043625 3044161 D similar to Yersinia pestis YPO3953 gluconokinase (65.8% evalue=2.E-61); thermosensitive gluconokinase 3043625..3044161 Yersinia pseudotuberculosis IP 32953 2955865 YP_071083.1 CDS YPTB2573 NC_006155.1 3044239 3044706 D similar to Yersinia pestis YPO2541 conserved hypothetical protein (100% evalue=2.E-84); Salmonella typhimurium STM3669 yiaL; cytoplasmic protein (34.2% evalue=1.E-17); hypothetical protein 3044239..3044706 Yersinia pseudotuberculosis IP 32953 2954341 YP_071084.1 CDS YPTB2574 NC_006155.1 3045035 3046303 R similar to Yersinia pestis YPO2542 hypothetical protein (61.4% evalue=1.E-130); hypothetical protein complement(3045035..3046303) Yersinia pseudotuberculosis IP 32953 2954342 YP_071085.1 CDS nuoN NC_006155.1 3046542 3048005 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(3046542..3048005) Yersinia pseudotuberculosis IP 32953 2956179 YP_071086.1 CDS nuoM NC_006155.1 3048012 3049544 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(3048012..3049544) Yersinia pseudotuberculosis IP 32953 2956178 YP_071087.1 CDS nuoL NC_006155.1 3049584 3051428 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(3049584..3051428) Yersinia pseudotuberculosis IP 32953 2956177 YP_071088.1 CDS nuoK NC_006155.1 3051425 3051727 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(3051425..3051727) Yersinia pseudotuberculosis IP 32953 2956176 YP_071089.1 CDS nuoJ NC_006155.1 3051724 3052269 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(3051724..3052269) Yersinia pseudotuberculosis IP 32953 2956175 YP_071090.1 CDS nuoI NC_006155.1 3052282 3052824 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(3052282..3052824) Yersinia pseudotuberculosis IP 32953 2956174 YP_071091.1 CDS nuoH NC_006155.1 3052839 3053816 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(3052839..3053816) Yersinia pseudotuberculosis IP 32953 2956173 YP_071092.1 CDS nuoG NC_006155.1 3053813 3056557 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(3053813..3056557) Yersinia pseudotuberculosis IP 32953 2956172 YP_071093.1 CDS nuoF NC_006155.1 3056644 3058029 R shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(3056644..3058029) Yersinia pseudotuberculosis IP 32953 2956171 YP_071094.1 CDS nuoE NC_006155.1 3058026 3058589 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(3058026..3058589) Yersinia pseudotuberculosis IP 32953 2956170 YP_071095.1 CDS nuoD NC_006155.1 3058592 3060388 R NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; NADH:ubiquinone oxidoreductase subunit C/D complement(3058592..3060388) Yersinia pseudotuberculosis IP 32953 2956169 YP_071096.1 CDS nuoB NC_006155.1 3060531 3061208 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(3060531..3061208) Yersinia pseudotuberculosis IP 32953 2956168 YP_071097.1 CDS nuoA NC_006155.1 3061310 3061810 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(3061310..3061810) Yersinia pseudotuberculosis IP 32953 2956167 YP_071098.1 CDS pecT NC_006155.1 3062487 3063419 R similar to Yersinia pestis YPO2556 pecT, hexA; LysR-family transcriptional regulatory protein (100% evalue=1.E-174); Salmonella typhimurium STM2330 lrhA; NADH dehydrogenase transcriptional repressor (LysR family) (72% evalue=1.E-118); LysR family transcriptional regulator complement(3062487..3063419) Yersinia pseudotuberculosis IP 32953 2956227 YP_071099.1 CDS aat NC_006155.1 3064275 3065489 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 3064275..3065489 Yersinia pseudotuberculosis IP 32953 2955154 YP_071100.1 CDS YPTB2590 NC_006155.1 3065640 3066233 D similar to Yersinia pestis YPO2559 conserved hypothetical protein (99.4% evalue=1.E-108); Escherichia coli ECs3175 alpha helix protein (80.9% evalue=9.E-86); hypothetical protein 3065640..3066233 Yersinia pseudotuberculosis IP 32953 2954343 YP_071101.1 CDS YPTB2591 NC_006155.1 3066280 3066591 R similar to Yersinia pestis YPO2560 exported protein (97.1% evalue=1.E-33); hypothetical protein complement(3066280..3066591) Yersinia pseudotuberculosis IP 32953 2954344 YP_071102.1 CDS YPTB2592 NC_006155.1 3066945 3068837 R similar to Yersinia pestis YPO2561 ion transport protein (99.6% evalue=0); Escherichia coli Z3553 yfbS; transport protein (71.4% evalue=0); sodium:sulfate symporter complement(3066945..3068837) Yersinia pseudotuberculosis IP 32953 2954345 YP_071103.2 CDS YPTB2593 NC_006155.1 3069069 3069725 R similar to Yersinia pestis YPO2562 haloacid dehalogenase-like hydrolase (98.6% evalue=1.E-120); Escherichia coli ECs3177 phosphatase (71.9% evalue=6.E-85); phosphatase complement(3069069..3069725) Yersinia pseudotuberculosis IP 32953 2954346 YP_071104.1 CDS YPTB2594 NC_006155.1 3069890 3070384 R similar to Yersinia pestis YPO2563 conserved hypothetical protein (100% evalue=4.E-93); Escherichia coli ECs3178 hypothetical protein (80.4% evalue=3.E-78); hypothetical protein complement(3069890..3070384) Yersinia pseudotuberculosis IP 32953 2954347 YP_071105.1 CDS YPTB2595 NC_006155.1 3070724 3071179 R similar to Yersinia pestis YPO2564 conserved hypothetical protein (99.3% evalue=3.E-85); Salmonella typhimurium STM2336 cytoplasmic protein (71.5% evalue=1.E-61); hypothetical protein complement(3070724..3071179) Yersinia pseudotuberculosis IP 32953 2954348 YP_071106.1 CDS YPTB2596 NC_006155.1 3071420 3071611 D similar to Yersinia pestis YPO2565 hypothetical protein, 98% identical.; hypothetical protein 3071420..3071611 Yersinia pseudotuberculosis IP 32953 2954349 YP_071107.1 CDS ackA NC_006155.1 3071601 3072803 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3071601..3072803 Yersinia pseudotuberculosis IP 32953 2955164 YP_071108.1 CDS pta NC_006155.1 3072971 3075124 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3072971..3075124 Yersinia pseudotuberculosis IP 32953 2956356 YP_071109.1 CDS YPTB2599 NC_006155.1 3075390 3076424 R similar to Yersinia pestis YPO2568 LacI-family transcriptional regulatory protein (99.7% evalue=0); Salmonella typhimurium STM2345 transcriptional regulator (41.4% evalue=8.E-67); LacI family transcriptional regulator complement(3075390..3076424) Yersinia pseudotuberculosis IP 32953 2954350 YP_071110.1 CDS YPTB2600 NC_006155.1 3076791 3077234 D similar to Yersinia pestis YPO2569 phosphotransferase enzyme II, A component (99.3% evalue=9.E-77); Salmonella typhi STY2574 sugar phosphotransferase component II A (44.8% evalue=3.E-32); PTS system mannitol transporter subunit IIA 3076791..3077234 Yersinia pseudotuberculosis IP 32953 2954351 YP_071111.1 CDS YPTB2601 NC_006155.1 3077403 3077690 D similar to Salmonella typhimurium STM2343 sugar phosphotransferase component IIB (42.5% evalue=1.E-13); C. perfringens CPE0522 PTS system, mannitol-specific II component (39.3% evalue=3.E-14); PTS system mannitol/pentitol transporter subunit IIB 3077403..3077690 Yersinia pseudotuberculosis IP 32953 2954352 YP_071112.1 CDS ulaA NC_006155.1 3077703 3078959 D membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 3077703..3078959 Yersinia pseudotuberculosis IP 32953 2954353 YP_071113.1 CDS YPTB2603 NC_006155.1 3079076 3079624 R similar to Yersinia pestis YPO2781 conserved hypothetical protein (100% evalue=1.E-104); Salmonella typhi STY2576 conserved hypothetical protein (81.5% evalue=3.E-79); hypothetical protein complement(3079076..3079624) Yersinia pseudotuberculosis IP 32953 2954354 YP_071114.1 CDS YPTB2604 NC_006155.1 3079846 3080397 R similar to Yersinia pestis YPO2780 conserved hypothetical protein (93% evalue=5.E-90); Escherichia coli b2300 yfcE; hypothetical 20.1 kD protein in PTA-folX intergenic region (69% evalue=4.E-69); phosphodiesterase complement(3079846..3080397) Yersinia pseudotuberculosis IP 32953 2954355 YP_071115.1 CDS YPTB2605 NC_006155.1 3080585 3081283 R similar to Yersinia pestis YPO2779 conserved hypothetical protein (98.7% evalue=1.E-130); Salmonella typhi STY1354 conserved hypothetical protein (33.7% evalue=2.E-28); hypothetical protein complement(3080585..3081283) Yersinia pseudotuberculosis IP 32953 2954356 YP_071116.1 CDS YPTB2606 NC_006155.1 3081631 3082539 D similar to Yersinia pestis YPO2778 conserved hypothetical protein (100% evalue=1.E-174); Escherichia coli JW2301 hypothetical protein (68.7% evalue=1.E-117); hypothetical protein 3081631..3082539 Yersinia pseudotuberculosis IP 32953 2954357 YP_071117.1 CDS hisP NC_006155.1 3082663 3083460 R similar to Yersinia pestis YPO2777 hisP; histidine transport ATP-binding protein HisP (99.6% evalue=1.E-146); Escherichia coli ECs3190 ATP-binding component of histidine transport (86.7% evalue=1.E-122); histidine/lysine/arginine/ornithine transporter subunit complement(3082663..3083460) Yersinia pseudotuberculosis IP 32953 2955799 YP_071118.1 CDS hisM NC_006155.1 3083474 3084190 R similar to Yersinia pestis YPO2776 hisM; histidine transport system permease HisM (100% evalue=1.E-133); Escherichia coli ECs3191 histidine transport system membrane protein M (81.5% evalue=1.E-113); histidine ABC transporter permease HisM complement(3083474..3084190) Yersinia pseudotuberculosis IP 32953 2955798 YP_071119.1 CDS hisQ NC_006155.1 3084187 3084873 R similar to Yersinia pestis YPO2775 hisQ; histidine transport system permease HisQ (100% evalue=1.E-125); Escherichia coli JW2305 hisQ; Histidine transport system permease HisQ (77.6% evalue=5.E-97); histidine ABC transporter permease HisQ complement(3084187..3084873) Yersinia pseudotuberculosis IP 32953 2955800 YP_071120.1 CDS hisJ NC_006155.1 3084969 3085751 R similar to Yersinia pestis YPO2774 hisJ; histidine-binding periplasmic protein (100% evalue=1.E-144); Escherichia coli JW2306 hisJ; Histidine-binding periplasmic protein precursor (hbp) (76.4% evalue=1.E-112); histidine ABC transporter substrate-binding protein HisJ complement(3084969..3085751) Yersinia pseudotuberculosis IP 32953 2955797 YP_071121.1 CDS ubiX NC_006155.1 3086294 3086866 R catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(3086294..3086866) Yersinia pseudotuberculosis IP 32953 2956856 YP_071122.1 CDS purF NC_006155.1 3087113 3088630 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3087113..3088630) Yersinia pseudotuberculosis IP 32953 2956371 YP_071123.1 CDS cvpA NC_006155.1 3088643 3089152 R membrane protein required for colicin V production; colicin V production protein complement(3088643..3089152) Yersinia pseudotuberculosis IP 32953 2955382 YP_071124.1 CDS dedD NC_006155.1 3089464 3090186 R similar to Yersinia pestis YPO2770 dedD; membrane protein (99.5% evalue=1.E-132); Escherichia coli Z3576 dedD; lipoprotein (56.7% evalue=2.E-62); hypothetical protein complement(3089464..3090186) Yersinia pseudotuberculosis IP 32953 2955445 YP_071125.1 CDS folC NC_006155.1 3090306 3091610 R similar to Yersinia pestis YPO2769 folC, dedC; dihydrofolate synthase / folylpolyglutamate synthase (100% evalue=0); Salmonella typhimurium STM2365 folC (65.2% evalue=1.E-156); bifunctional folylpolyglutamate synthase/dihydrofolate synthase complement(3090306..3091610) Yersinia pseudotuberculosis IP 32953 2955632 YP_071126.1 CDS accD NC_006155.1 3091859 3092773 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(3091859..3092773) Yersinia pseudotuberculosis IP 32953 2955158 YP_071127.1 CDS dedA NC_006155.1 3093004 3093666 R similar to Yersinia pestis YPO2767 dedA; membrane protein (100% evalue=1.E-122); Salmonella typhimurium STM2367 dedA; DedA family (85.1% evalue=1.E-105); hypothetical protein complement(3093004..3093666) Yersinia pseudotuberculosis IP 32953 2955444 YP_071128.1 CDS truA NC_006155.1 3093823 3094722 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3093823..3094722) Yersinia pseudotuberculosis IP 32953 2956834 YP_071129.1 CDS asd NC_006155.1 3094722 3095732 R similar to Yersinia pestis YPO2765 asd, usg-1; aspartate-semialdehyde dehydrogenase (100% evalue=0); Salmonella typhi STY2600 usg; semialdehyde dehydrogenase (71.5% evalue=1.E-136); semialdehyde dehydrogenase complement(3094722..3095732) Yersinia pseudotuberculosis IP 32953 2955241 YP_071130.1 CDS pdxB NC_006155.1 3095902 3097089 R catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase complement(3095902..3097089) Yersinia pseudotuberculosis IP 32953 2956223 YP_071131.1 CDS YPTB2621 NC_006155.1 3097076 3097861 R similar to Yersinia pestis YPO2762 AraC-family regulatory protein (99.2% evalue=1.E-148); Vibrio cholerae VCA0937 transcriptional regulator, AraC/XylS family (46% evalue=2.E-61); AraC family transcriptional regulator complement(3097076..3097861) Yersinia pseudotuberculosis IP 32953 2954358 YP_071132.1 CDS YPTB2622 NC_006155.1 3098045 3098962 D similar to Yersinia pestis YPO2761 membrane protein (99.3% evalue=1.E-169); Agrobacterium tumefaciens Atu5339 conserved hypothetical protein (46.9% evalue=6.E-71); DMT superfamily drug/metabolite efflux protein 3098045..3098962 Yersinia pseudotuberculosis IP 32953 2954359 YP_071133.1 CDS flk NC_006155.1 3099247 3100284 D in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 3099247..3100284 Yersinia pseudotuberculosis IP 32953 2955626 YP_071134.1 CDS smfA NC_006155.1 3100626 3101156 R similar to Yersinia pestis YPO2759 smfA, mrpA; mannose-resistant/Proteus-like fimbrial protein (99.4% evalue=1.E-91); Salmonella typhimurium STM0195 stfA; fimbrial subunit (37.3% evalue=9.E-20); fimbrial protein complement(3100626..3101156) Yersinia pseudotuberculosis IP 32953 2956613 YP_071135.1 CDS YPTB2625 NC_006155.1 3101944 3102639 D similar to Yersinia pestis YPO2758 aspartate/glutamate racemase (99.5% evalue=1.E-127); Salmonella typhi STY3159 ygeA; conserved hypothetical protein (58.5% evalue=7.E-76); aspartate/glutamate racemase 3101944..3102639 Yersinia pseudotuberculosis IP 32953 2954360 YP_071136.1 CDS fabB NC_006155.1 3103047 3104270 R FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3103047..3104270) Yersinia pseudotuberculosis IP 32953 2955514 YP_071137.2 CDS mnmC NC_006155.1 3104442 3106511 D catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3104442..3106511 Yersinia pseudotuberculosis IP 32953 2954361 YP_071138.1 CDS YPTB2628 NC_006155.1 3106813 3107091 R similar to Yersinia pestis YPO2755 conserved hypothetical protein (100% evalue=1.E-46); Salmonella typhimurium STM2380 yfcL; cytoplasmic protein (69.6% evalue=3.E-28); hypothetical protein complement(3106813..3107091) Yersinia pseudotuberculosis IP 32953 2954362 YP_071139.1 CDS YPTB2629 NC_006155.1 3107149 3107691 R similar to Yersinia pestis YPO2754 conserved hypothetical protein (98.8% evalue=1.E-107); Escherichia coli ECs3210 transporting ATPase (71.2% evalue=2.E-77); hypothetical protein complement(3107149..3107691) Yersinia pseudotuberculosis IP 32953 2954363 YP_071140.1 CDS yfcA NC_006155.1 3107791 3108597 R similar to Yersinia pestis YPO2753 yfcA; membrane protein (100% evalue=1.E-148); Escherichia coli ECs3211 structural protein (72.1% evalue=1.E-107); hypothetical protein complement(3107791..3108597) Yersinia pseudotuberculosis IP 32953 2957016 YP_071141.1 CDS mepA NC_006155.1 3108601 3109389 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(3108601..3109389) Yersinia pseudotuberculosis IP 32953 2956018 YP_071142.1 CDS aroC NC_006155.1 3109434 3110519 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3109434..3110519) Yersinia pseudotuberculosis IP 32953 2955223 YP_071143.1 CDS YPTB2633 NC_006155.1 3110596 3111597 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(3110596..3111597) Yersinia pseudotuberculosis IP 32953 2954364 YP_071144.1 CDS YPTB2634 NC_006155.1 3111817 3112428 D similar to Yersinia pestis YPO2749 conserved hypothetical protein (100% evalue=1.E-101); Escherichia coli Z3594 hypothetical protein (72.7% evalue=1.E-73); hypothetical protein 3111817..3112428 Yersinia pseudotuberculosis IP 32953 2954365 YP_071145.1 CDS sixA NC_006155.1 3112873 3113364 R similar to Yersinia pestis YPO2748 sixA; phosphohistidine phosphatase (100% evalue=4.E-90); Salmonella typhimurium STM2387 sixA; phosphohistidine phosphatase (66.4% evalue=3.E-54); phosphohistidine phosphatase complement(3112873..3113364) Yersinia pseudotuberculosis IP 32953 2956608 YP_071146.1 CDS fadJ NC_006155.1 3113963 3116305 R multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha complement(3113963..3116305) Yersinia pseudotuberculosis IP 32953 2955529 YP_071147.1 CDS fadI NC_006155.1 3116305 3117615 R FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase complement(3116305..3117615) Yersinia pseudotuberculosis IP 32953 2954366 YP_071148.1 CDS YPTB2638 NC_006155.1 3117902 3118198 R similar to Yersinia pestis YPO2745 conserved hypothetical protein (100% evalue=6.E-52); Escherichia coli Z3606 hypothetical protein (63.8% evalue=1.E-29); hypothetical protein complement(3117902..3118198) Yersinia pseudotuberculosis IP 32953 2954367 YP_071149.1 CDS fadL NC_006155.1 3118612 3119877 D similar to Yersinia pestis YPO2744 fadL, ttr; long-chain fatty acid transport protein (99.7% evalue=0); Salmonella typhimurium STM2391 fadL; transport of long-chain fatty acids; sensitivity to phage T2 (64.4% evalue=1.E-168); long-chain fatty acid outer membrane transporter 3118612..3119877 Yersinia pseudotuberculosis IP 32953 2955527 YP_071150.1 CDS vcaJ NC_006155.1 3119984 3120748 R similar to Yersinia pestis YPO2743.1 vcaJ; VacJ lipoprotein (100% evalue=1.E-147); Escherichia coli ECs3229 lipoprotein precursor (75% evalue=1.E-110); VacJ lipoprotein complement(3119984..3120748) Yersinia pseudotuberculosis IP 32953 2956891 YP_071151.1 CDS YPTB2641 NC_006155.1 3120784 3122010 R similar to Yersinia pestis YPO2743 cytochrome c-type biogenesis protein (99.7% evalue=0); Salmonella typhimurium STM3812 ccmH; heme lyase subunit, cytochrome c-type biogenesis (54.8% evalue=1.E-55); cytochrome c-type biogenesis protein complement(3120784..3122010) Yersinia pseudotuberculosis IP 32953 2954368 YP_071152.1 CDS ccmH NC_006155.1 3122010 3122522 R similar to Yersinia pestis YPO2741 ccmH; cytochrome c-type biogenesis protein (100% evalue=5.E-91); Escherichia coli Z3451 ccmH; cytochrome C-type biogenesis protein ccmH (60.3% evalue=4.E-40); cytochrome c-type biogenesis protein complement(3122010..3122522) Yersinia pseudotuberculosis IP 32953 2955313 YP_071153.1 CDS ccmG NC_006155.1 3122519 3123085 R similar to Yersinia pestis YPO2740 ccmG, dsbE; thiol:disulfide interchange protein DsbE (100% evalue=1.E-107); Escherichia coli b2195 dsbE, ccmG; thiol:disulfide interchange protein dsbE precursor (cytochrome C biogenesis protein ccmg) (73.2% evalue=2.E-76); thiol:disulfide interchange protein DsbE complement(3122519..3123085) Yersinia pseudotuberculosis IP 32953 2955312 YP_071154.1 CDS ccmF NC_006155.1 3123082 3125052 R similar to Yersinia pestis YPO2739 ccmF; cytochrome c-type biogenesis protein (99.8% evalue=0); Escherichia coli b2196 ccmF; cytochrome C-type biogenesis protein ccmF (70.9% evalue=0); cytochrome c-type biogenesis protein complement(3123082..3125052) Yersinia pseudotuberculosis IP 32953 2955311 YP_071155.1 CDS ccmE NC_006155.1 3125049 3125543 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(3125049..3125543) Yersinia pseudotuberculosis IP 32953 2955310 YP_071156.1 CDS ccmD NC_006155.1 3125540 3125890 R similar to Yersinia pestis YPO2737 ccmD; heme exporter protein D (86.2% evalue=7.E-50); Escherichia coli b2198 ccmD; hemE exporter protein D (cytochrome C-type biogenesis protein ccmD) (50.7% evalue=1.E-15); heme exporter protein D complement(3125540..3125890) Yersinia pseudotuberculosis IP 32953 2955309 YP_071157.1 CDS ccmC NC_006155.1 3125887 3126624 R similar to Yersinia pestis YPO2736 ccmC; heme exporter protein C (99.5% evalue=1.E-145); Escherichia coli b2199 ccmC; hemE exporter protein C (cytochrome C-type biogenesis protein ccmC) (76.2% evalue=1.E-112); heme ABC transporter permease CcmC complement(3125887..3126624) Yersinia pseudotuberculosis IP 32953 2955308 YP_071158.1 CDS ccmB NC_006155.1 3126687 3127346 R similar to Yersinia pestis YPO2735 ccmB; heme exporter protein B (100% evalue=1.E-116); Escherichia coli b2200 ccmB; hemE exporter protein B (cytochrome C-type biogenesis protein ccmB) (77.1% evalue=7.E-91); heme ABC transporter permease subunit CcmB complement(3126687..3127346) Yersinia pseudotuberculosis IP 32953 2955307 YP_071159.1 CDS ccmA NC_006155.1 3127316 3127972 R ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA complement(3127316..3127972) Yersinia pseudotuberculosis IP 32953 2955306 YP_071160.1 CDS YPTB2650 NC_006155.1 3128417 3128884 R similar to Yersinia pestis YPO2733 exported protein (98.7% evalue=2.E-84); hypothetical protein complement(3128417..3128884) Yersinia pseudotuberculosis IP 32953 2954369 YP_071161.1 CDS lemA NC_006155.1 3129501 3130043 D similar to Yersinia pestis YPO2732 lemA; exported protein (100% evalue=3.E-97); Agrobacterium tumefaciens AGR_C_1138 lemA; lemA protein (49.4% evalue=2.E-43); hypothetical protein 3129501..3130043 Yersinia pseudotuberculosis IP 32953 2955936 YP_071162.1 CDS YPTB2652 NC_006155.1 3129988 3132087 D similar to Yersinia pestis YPO2731 membrane protein (99.7% evalue=0); Escherichia coli b1268 yciQ; hypothetical 71.3 kD protein in trpL-btuR intergenic region (ORF2/3) (27.8% evalue=5.E-59); hypothetical protein 3129988..3132087 Yersinia pseudotuberculosis IP 32953 2954370 YP_071163.1 CDS YPTB2653 NC_006155.1 3132463 3132804 D similar to Yersinia pestis YPO2730 conserved hypothetical protein (99.1% evalue=2.E-62); Salmonella typhi STY4488 phnA; conserved hypothetical protein (72% evalue=3.E-43); hypothetical protein 3132463..3132804 Yersinia pseudotuberculosis IP 32953 2954371 YP_071164.1 CDS YPTB2654 NC_006155.1 3132879 3133244 R similar to Yersinia pestis YPO2729 membrane protein (100% evalue=2.E-60); hypothetical protein complement(3132879..3133244) Yersinia pseudotuberculosis IP 32953 2954372 YP_071165.1 CDS YPTB2655 NC_006155.1 3133251 3133730 R similar to Yersinia pestis YPO2728 conserved hypothetical protein (100% evalue=2.E-88); Salmonella typhi STY0290 conserved hypothetical protein (38.7% evalue=6.E-21); hypothetical protein complement(3133251..3133730) Yersinia pseudotuberculosis IP 32953 2954373 YP_071166.1 CDS YPTB2656 NC_006155.1 3133795 3134601 R similar to Yersinia pestis YPO2727 conserved hypothetical protein (98.8% evalue=1.E-154); Pseudomonas aeruginosa PA0086 hypothetical protein (37.7% evalue=1.E-39); hypothetical protein complement(3133795..3134601) Yersinia pseudotuberculosis IP 32953 2954374 YP_071167.1 CDS YPTB2657 NC_006155.1 3134621 3135469 R similar to Yersinia pestis YPO2726 hypothetical protein (100% evalue=1.E-164); hypothetical protein complement(3134621..3135469) Yersinia pseudotuberculosis IP 32953 2954375 YP_071168.1 CDS YPTB2658 NC_006155.1 3135469 3135729 R similar to Salmonella typhi STY0321 Rhs-family protein (39.7% evalue=2.E-07); Ralstonia solanacearum RS01806 probable transmembrane protein (47.2% evalue=6.E-09); hypothetical protein complement(3135469..3135729) Yersinia pseudotuberculosis IP 32953 2954376 YP_071169.1 CDS YPTB2659 NC_006155.1 3135809 3138721 R similar to Yersinia pestis YPO2725 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY0319 Rhs-family protein (41.3% evalue=1.E-137); hypothetical protein complement(3135809..3138721) Yersinia pseudotuberculosis IP 32953 2954377 YP_071170.1 CDS YPTB2660 NC_006155.1 3139015 3142842 R similar to Yersinia pestis YPO2724 membrane protein (99.4% evalue=0); Salmonella typhimurium STM0285 inner membrane protein (32% evalue=0); hypothetical protein complement(3139015..3142842) Yersinia pseudotuberculosis IP 32953 2954378 YP_071171.1 CDS YPTB2661 NC_006155.1 3142851 3144227 R similar to Yersinia pestis YPO2723 OmpA family protein (100% evalue=1.E-144); Salmonella typhimurium STM0282 outer membrane protein, OmpA family (41.1% evalue=2.E-83); OmpA/MotB family protein complement(3142851..3144227) Yersinia pseudotuberculosis IP 32953 2954379 YP_071172.1 CDS YPTB2662 NC_006155.1 3144224 3145573 R similar to Yersinia pestis YPO2934 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0281 cytoplasmic protein (51.6% evalue=1.E-132); hypothetical protein complement(3144224..3145573) Yersinia pseudotuberculosis IP 32953 2954380 YP_071173.1 CDS YPTB2663 NC_006155.1 3145577 3146137 R similar to Yersinia pestis YPO2935 exported protein (100% evalue=1.E-101); Pseudomonas aeruginosa PA0080 hypothetical protein (33.3% evalue=2.E-15); hypothetical protein complement(3145577..3146137) Yersinia pseudotuberculosis IP 32953 2954381 YP_071174.1 CDS YPTB2664 NC_006155.1 3146390 3146959 R similar to Yersinia pestis YPO2937 conserved hypothetical protein (100% evalue=2.E-90); Salmonella typhimurium STM0279 cytoplasmic protein (56.3% evalue=1.E-47); hypothetical protein complement(3146390..3146959) Yersinia pseudotuberculosis IP 32953 2954382 YP_071175.1 CDS YPTB2665 NC_006155.1 3147208 3148710 R similar to Yersinia pestis YPO2938 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM0274 cytoplasmic protein (78.8% evalue=0); hypothetical protein complement(3147208..3148710) Yersinia pseudotuberculosis IP 32953 2954383 YP_071176.1 CDS YPTB2666 NC_006155.1 3148734 3149258 R similar to Yersinia pestis YPO2939 conserved hypothetical protein (100% evalue=9.E-92); Salmonella typhimurium STM0273 cytoplasmic protein (77.1% evalue=1.E-68); hypothetical protein complement(3148734..3149258) Yersinia pseudotuberculosis IP 32953 2954384 YP_071177.1 CDS YPTB2667 NC_006155.1 3149364 3149972 R similar to Yersinia pestis YPO2945 frimbrial protein (37.1% evalue=3.E-13); fimbrial protein complement(3149364..3149972) Yersinia pseudotuberculosis IP 32953 2954385 YP_071178.1 CDS YPTB2668 NC_006155.1 3149957 3152668 R similar to Xylella fastidiosa XF0081 outer membrane usher protein precursor (33.8% evalue=1.E-137); Pseudomonas aeruginosa PA4084 probable fimbrial biogenesis usher protein (35.2% evalue=1.E-131); outer membrane fimbrial usher porin complement(3149957..3152668) Yersinia pseudotuberculosis IP 32953 2954386 YP_071179.1 CDS YPTB2669 NC_006155.1 3152757 3153518 R similar to Yersinia pestis YPO2944 pili chaperone protein (100% evalue=1.E-140); Escherichia coli Z0151 ecpD; fimbrial chaperone protein (44.4% evalue=1.E-51); pili chaperone protein complement(3152757..3153518) Yersinia pseudotuberculosis IP 32953 2954387 YP_071180.1 CDS YPTB2670 NC_006155.1 3153675 3154220 R similar to Yersinia pestis YPO2945 frimbrial protein (98.8% evalue=2.E-96); Xylella fastidiosa XF0083 fimbrial subunit precursor (36.1% evalue=2.E-16); frimbrial protein complement(3153675..3154220) Yersinia pseudotuberculosis IP 32953 2954388 YP_071181.1 CDS clpB5 NC_006155.1 3154431 3157088 R similar to Yersinia pestis YPO2946 clpB5; Clp ATPase (99.2% evalue=0); Salmonella typhimurium STM0272 ATPase with chaperone activity; Homolog of Yersinia clpB (60.1% evalue=0); Clp ATPase complement(3154431..3157088) Yersinia pseudotuberculosis IP 32953 2955338 YP_071182.1 CDS YPTB2672 NC_006155.1 3157872 3159752 D similar to Yersinia pestis YPO2947 conserved hypothetical protein (99.8% evalue=0); Salmonella typhimurium STM0268 cytoplasmic protein (55.4% evalue=0); hypothetical protein 3157872..3159752 Yersinia pseudotuberculosis IP 32953 2954389 YP_071183.1 CDS YPTB2673 NC_006155.1 3159752 3160777 D similar to Yersinia pestis YPO2948 conserved hypothetical protein (99.7% evalue=0); Salmonella typhimurium STM0267 cytoplasmic protein (45.4% evalue=2.E-78); hypothetical protein 3159752..3160777 Yersinia pseudotuberculosis IP 32953 2954390 YP_071184.1 CDS YPTB2674 NC_006155.1 3160876 3162069 D similar to Yersinia pestis YPO2949 hypothetical protein (97.9% evalue=0); Salmonella typhimurium STM0266 cytoplasmic protein (32.2% evalue=3.E-45); hypothetical protein 3160876..3162069 Yersinia pseudotuberculosis IP 32953 2954391 YP_071185.1 CDS YPTB2675 NC_006155.1 3162076 3163107 D similar to Yersinia pestis YPO2950 fimbrial protein (96.2% evalue=0); fimbrial protein 3162076..3163107 Yersinia pseudotuberculosis IP 32953 2954392 YP_071186.1 CDS YPTB2676 NC_006155.1 3163147 3164484 D similar to Yersinia pestis YPO2951 hypothetical protein (98.4% evalue=0); hypothetical protein 3163147..3164484 Yersinia pseudotuberculosis IP 32953 2954393 YP_071187.1 CDS YPTB2677 NC_006155.1 3164481 3165182 D similar to Yersinia pestis YPO2952 membrane protein (95.2% evalue=1.E-122); hypothetical protein 3164481..3165182 Yersinia pseudotuberculosis IP 32953 2954394 YP_071188.1 CDS YPTB2678 NC_006155.1 3165183 3166865 D similar to Yersinia pestis YPO2953 membrane protein (97.1% evalue=0); OMPA family outer membrane porin 3165183..3166865 Yersinia pseudotuberculosis IP 32953 2954395 YP_071189.1 CDS YPTB2679 NC_006155.1 3166862 3167344 D similar to Yersinia pestis YPO2954 hypothetical protein (100% evalue=2.E-89); hypothetical protein 3166862..3167344 Yersinia pseudotuberculosis IP 32953 2954396 YP_071190.1 CDS YPTB2680 NC_006155.1 3167717 3168319 R similar to Yersinia pestis YPO2955 luxR-family regulatory protein (99% evalue=1.E-107); LuxR family transcriptional regulator complement(3167717..3168319) Yersinia pseudotuberculosis IP 32953 2954397 YP_071191.1 CDS mltB NC_006155.1 3169588 3170682 R membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B complement(3169588..3170682) Yersinia pseudotuberculosis IP 32953 2956050 YP_071192.1 CDS sfuA NC_006155.1 3171011 3172030 D similar to Yersinia pestis YPO2958 sfuA, yfuA; iron(III)-binding periplasmic protein (99.7% evalue=0); Mesorhizobium loti mlr3495 iron-binding periplasmic protein; sfuA protein precursor (72.2% evalue=1.E-130); iron(III)-ABC transporter substrate-binding protein 3171011..3172030 Yersinia pseudotuberculosis IP 32953 2956603 YP_071193.1 CDS sfuB NC_006155.1 3172085 3173671 D similar to Yersinia pestis YPO2959 sfuB, yfuB; iron(III)-transport system permease (99.2% evalue=0); Mesorhizobium loti mlr3497 IRON(III)-TRANSPORT SYSTEM PERMEase SFUB (63.4% evalue=0); iron ABC transporter permease 3172085..3173671 Yersinia pseudotuberculosis IP 32953 2956604 YP_071194.1 CDS sfuC NC_006155.1 3173668 3174717 D similar to Yersinia pestis YPO2960 sfuC, yfuC; iron(III)-transport ATP-binding protein (99.7% evalue=0); Mesorhizobium loti mlr3498 IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC (50.6% evalue=6.E-89); iron(III) ABC transporter ATP-binding protein 3173668..3174717 Yersinia pseudotuberculosis IP 32953 2956605 YP_071195.1 CDS YPTB2685 NC_006155.1 3174790 3175314 R similar to Yersinia pestis YPO2961 membrane protein (100% evalue=1.E-93); Mesorhizobium loti mll8055 hypothetical protein (38.6% evalue=5.E-28); hypothetical protein complement(3174790..3175314) Yersinia pseudotuberculosis IP 32953 2954398 YP_071196.1 CDS YPTB2686 NC_006155.1 3175775 3176260 D similar to Yersinia pestis YPO2962 conserved hypothetical protein (100% evalue=1.E-88); hypothetical protein 3175775..3176260 Yersinia pseudotuberculosis IP 32953 2954399 YP_071197.1 CDS YPTB2687 NC_006155.1 3176490 3177338 R similar to Yersinia pestis YPO4049 membrane protein (30.3% evalue=5.E-15); hypothetical protein complement(3176490..3177338) Yersinia pseudotuberculosis IP 32953 2954400 YP_071198.1 CDS dmsA NC_006155.1 3178169 3180595 D similar to Yersinia pestis YPO2965 dmsA; dimethyl sulfoxide reductase chain A protein (99.2% evalue=0); Salmonella typhimurium STM4305 anaerobic dimethyl sulfoxide reductase, subunit A (56.2% evalue=0); dimethyl sulfoxide reductase subunit A 3178169..3180595 Yersinia pseudotuberculosis IP 32953 2955464 YP_071199.1 CDS dmsB NC_006155.1 3180607 3181224 D similar to Yersinia pestis YPO2966 dmsB; dimethyl sulfoxide reductase chain B protein (100% evalue=1.E-125); Salmonella typhimurium STM4306 anaerobic dimethyl sulfoxide reductase, subunit B (67.8% evalue=2.E-87); dimethyl sulfoxide reductase subunit B 3180607..3181224 Yersinia pseudotuberculosis IP 32953 2955467 YP_071200.1 CDS dmsC NC_006155.1 3181226 3182002 D similar to Yersinia pestis YPO2967 dmsC; dimethyl sulfoxide reductase chain C protein (99.6% evalue=1.E-141); Salmonella typhimurium STM4307 anaerobic dimethyl sulfoxide reductase, subunit C (43% evalue=3.E-50); dimethyl sulfoxide reductase subunit C 3181226..3182002 Yersinia pseudotuberculosis IP 32953 2955469 YP_071201.1 CDS YPTB2691 NC_006155.1 3182484 3183080 D similar to Yersinia pestis YPO2968 conserved hypothetical protein (98.9% evalue=1.E-113); Salmonella typhimurium STM4308 component of anaerobic dehydrogenases (48.7% evalue=1.E-46); hypothetical protein 3182484..3183080 Yersinia pseudotuberculosis IP 32953 2954401 YP_071202.1 CDS YPTB2692 NC_006155.1 3183077 3183646 D similar to Yersinia pestis YPO2969 iron-sulphur protein (99.4% evalue=1.E-111); Pasteurella multocida PM1758 hypothetical HI1043 (37.9% evalue=6.E-21); (Fe-S)-binding protein 3183077..3183646 Yersinia pseudotuberculosis IP 32953 2954402 YP_071203.1 CDS YPTB2693 NC_006155.1 3183892 3184548 R similar to Yersinia pestis YPO2970 lipoprotein (100% evalue=1.E-119); Ralstonia solanacearum RS01774 probable lipoprotein (62.4% evalue=6.E-68); lipoprotein complement(3183892..3184548) Yersinia pseudotuberculosis IP 32953 2954403 YP_071204.1 CDS YPTB2694 NC_006155.1 3184545 3184946 R similar to Yersinia pestis YPO2971 lipoprotein (100% evalue=2.E-64); Ralstonia solanacearum RS01775 probable lipoprotein (45.2% evalue=5.E-24); lipoprotein complement(3184545..3184946) Yersinia pseudotuberculosis IP 32953 2954404 YP_071205.1 CDS YPTB2695 NC_006155.1 3184928 3185599 R similar to Yersinia pestis YPO2972 lipoprotein (97.7% evalue=1.E-119); Neisseria meningitidis NMB1164 hypothetical protein (76.4% evalue=9.E-89); lipoprotein complement(3184928..3185599) Yersinia pseudotuberculosis IP 32953 2954405 YP_071206.1 CDS YPTB2696 NC_006155.1 3186285 3186716 D similar to Yersinia pestis YPO2973 hypothetical protein (97.2% evalue=8.E-74); Escherichia coli ECs2042 hypothetical protein (27.6% evalue=3.E-10); hypothetical protein 3186285..3186716 Yersinia pseudotuberculosis IP 32953 2954406 YP_071207.1 CDS YPTB2697 NC_006155.1 3186811 3187335 R similar to Yersinia pestis YPO2974 B-type cytochrome (100% evalue=1.E-102); Salmonella typhi STY1868 cytochrome (44.7% evalue=1.E-43); B-type cytochrome complement(3186811..3187335) Yersinia pseudotuberculosis IP 32953 2954407 YP_071208.1 CDS YPTB2698 NC_006155.1 3187580 3188815 R similar to Yersinia pestis YPO2975 aminotransferase (99.7% evalue=0); Pseudomonas aeruginosa PA4715 N-succinyldiaminopimelate aminotransferase (90.7% evalue=0); aminotransferase complement(3187580..3188815) Yersinia pseudotuberculosis IP 32953 2954408 YP_071209.1 CDS YPTB2699 NC_006155.1 3189081 3190328 D similar to Yersinia pestis YPO2976 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0898 hypothetical protein (51.2% evalue=1.E-112); hypothetical protein 3189081..3190328 Yersinia pseudotuberculosis IP 32953 2954409 YP_071210.1 CDS glk NC_006155.1 3190406 3191377 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(3190406..3191377) Yersinia pseudotuberculosis IP 32953 2955692 YP_071211.1 CDS YPTB2701 NC_006155.1 3191558 3192034 R similar to Yersinia pestis YPO2978 membrane protein (98.7% evalue=1.E-85); Salmonella typhimurium STM3021 inner membrane protein (58.1% evalue=2.E-45); hypothetical protein complement(3191558..3192034) Yersinia pseudotuberculosis IP 32953 2954410 YP_071212.1 CDS YPTB2702 NC_006155.1 3192137 3193015 D similar to Yersinia pestis YPO2979 lysR-family transcriptional regulatory protein (100% evalue=1.E-167); Salmonella typhi STY3165 possible regulatory protein (59.7% evalue=9.E-90); LysR family transcriptional regulator 3192137..3193015 Yersinia pseudotuberculosis IP 32953 2954411 YP_071213.1 CDS YPTB2703 NC_006155.1 3193151 3194140 D similar to Yersinia pestis YPO2980 ion channel protein (99.6% evalue=0); Salmonella typhi STY2647 ion-channel protein (74.6% evalue=1.E-142); ion channel protein 3193151..3194140 Yersinia pseudotuberculosis IP 32953 2954412 YP_071214.1 CDS YPTB2704 NC_006155.1 3194311 3194724 D similar to Yersinia pestis YPO2981 exported protein (100% evalue=4.E-86); hypothetical protein 3194311..3194724 Yersinia pseudotuberculosis IP 32953 2954413 YP_071215.1 CDS mntH NC_006155.1 3194817 3196046 R similar to Yersinia pestis YPO2982 mntH; manganese transport protein MntH (100% evalue=0); Escherichia coli Z3658 transport system permease (77.5% evalue=1.E-176); manganese transport protein MntH complement(3194817..3196046) Yersinia pseudotuberculosis IP 32953 2956053 YP_071216.1 CDS nupC NC_006155.1 3196497 3197681 D similar to Yersinia pestis YPO2983 nupC, cru; nucleoside permease (100% evalue=0); Salmonella typhimurium STM2409 nupC; NUP family, nucleoside transport (81.7% evalue=1.E-176); CNT family H+/nucleoside symporter 3196497..3197681 Yersinia pseudotuberculosis IP 32953 2956180 YP_071217.1 CDS gltX NC_006155.1 3199412 3200827 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3199412..3200827 Yersinia pseudotuberculosis IP 32953 2955725 YP_071218.1 CDS YPTB2708 NC_006155.1 3201477 3202085 D similar to Yersinia pestis YPO2986 conserved hypothetical protein (100% evalue=1.E-117); Vibrio cholerae VCA0380 hypothetical protein (41.9% evalue=2.E-35); hypothetical protein 3201477..3202085 Yersinia pseudotuberculosis IP 32953 2954414 YP_071219.1 CDS YPTB2709 NC_006155.1 3202234 3202581 D similar to Yersinia pestis YPO2987 exported protein (98.2% evalue=3.E-55); Escherichia coli Z3672 hypothetical protein (37.7% evalue=1.E-11); hypothetical protein 3202234..3202581 Yersinia pseudotuberculosis IP 32953 2954415 YP_071220.1 CDS YPTB2710 NC_006155.1 3202698 3202913 R similar to Yersinia pestis YPO2988 conserved hypothetical protein (100% evalue=2.E-35); Salmonella typhimurium STM2426 cytoplasmic protein (78.2% evalue=1.E-24); hypothetical protein complement(3202698..3202913) Yersinia pseudotuberculosis IP 32953 2954416 YP_071221.1 CDS ligA NC_006155.1 3202933 3204945 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3202933..3204945) Yersinia pseudotuberculosis IP 32953 2955947 YP_071222.1 CDS zipA NC_006155.1 3205036 3206022 R interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA complement(3205036..3206022) Yersinia pseudotuberculosis IP 32953 2957124 YP_071223.1 CDS cysZ NC_006155.1 3206271 3207005 D role in sulfur assimilation; sulfate transport protein CysZ 3206271..3207005 Yersinia pseudotuberculosis IP 32953 2955417 YP_071224.1 CDS cysK NC_006155.1 3207162 3208130 D CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3207162..3208130 Yersinia pseudotuberculosis IP 32953 2955408 YP_071225.1 CDS ptsH NC_006155.1 3208629 3208886 D similar to Yersinia pestis YPO2993 ptsH, hpr; PTS system, phosphocarrier protein (100% evalue=8.E-41); Escherichia coli JW2408 ptsH; Phosphocarrier protein Hpr (histidine-containing protein) (97.6% evalue=5.E-40); PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 3208629..3208886 Yersinia pseudotuberculosis IP 32953 2956361 YP_071226.1 CDS ptsI NC_006155.1 3208935 3210662 D Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 3208935..3210662 Yersinia pseudotuberculosis IP 32953 2956362 YP_071227.1 CDS crr NC_006155.1 3210711 3211220 D functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 3210711..3211220 Yersinia pseudotuberculosis IP 32953 2955363 YP_071228.1 CDS YPTB2718 NC_006155.1 3211421 3212770 R similar to Yersinia pestis YPO2997 two-component system sensor kinase (99.5% evalue=0); Ralstonia solanacearum RS03089 probable two-component transmembrane sensor kinase transcription regulator protein (37.9% evalue=2.E-49); two-component system sensor kinase complement(3211421..3212770) Yersinia pseudotuberculosis IP 32953 2954417 YP_071229.1 CDS YPTB2719 NC_006155.1 3212796 3213479 R similar to Yersinia pestis YPO2998 two-component system response regulator (100% evalue=1.E-125); Ralstonia solanacearum RS03088 probable two-component response regulator transcription regulator protein (49.7% evalue=1.E-57); two-component system response regulator complement(3212796..3213479) Yersinia pseudotuberculosis IP 32953 2954418 YP_071230.1 CDS YPTB2720 NC_006155.1 3213667 3214872 D similar to Yersinia pestis YPO2999 HlyD family secretion protein (100% evalue=0); Agrobacterium tumefaciens Atu5177 efflux protein (45.9% evalue=6.E-89); HlyD family secretion protein 3213667..3214872 Yersinia pseudotuberculosis IP 32953 2954419 YP_071231.1 CDS YPTB2721 NC_006155.1 3214876 3216912 D similar to Yersinia pestis YPO3000 ABC transporter, ATP-binding protein (99.8% evalue=0); Agrobacterium tumefaciens Atu5178 ABC transporter, nucleotide binding/ATPase (54.7% evalue=0); ABC transporter permease/ATP-binding protein 3214876..3216912 Yersinia pseudotuberculosis IP 32953 2954420 YP_071232.1 CDS YPTB2722 NC_006155.1 3217167 3218813 R similar to Yersinia pestis YPO3001 pyridine nucleotide-disulphide oxidoreductase (99% evalue=0); Lactococcus lactis L194050 noxC; NADH oxidase (51.6% evalue=1.E-154); pyridine nucleotide-disulfide oxidoreductase complement(3217167..3218813) Yersinia pseudotuberculosis IP 32953 2954421 YP_071233.1 CDS YPTB2723 NC_006155.1 3218873 3220333 R similar to Yersinia pestis YPO3002 permease (99.7% evalue=0); Bacillus subtilis BG13069 yhjB; sodium:solute symporter (49.5% evalue=1.E-141); sodium:solute symporter (SSS) family protein complement(3218873..3220333) Yersinia pseudotuberculosis IP 32953 2954422 YP_071234.1 CDS YPTB2724 NC_006155.1 3220330 3220527 R similar to Yersinia pestis YPO3033 hypothetical protein; hypothetical protein complement(3220330..3220527) Yersinia pseudotuberculosis IP 32953 2954423 YP_071235.1 CDS YPTB2725 NC_006155.1 3220670 3221890 R similar to Yersinia pestis YPO1950 peptidase (70.3% evalue=1.E-162); Agrobacterium tumefaciens AGR_L_3328 hypothetical protein (30.6% evalue=2.E-43); peptidase complement(3220670..3221890) Yersinia pseudotuberculosis IP 32953 2954424 YP_071236.1 CDS YPTB2726 NC_006155.1 3221924 3223105 R similar to Yersinia pestis YPO3006 aminotransferase (99.4% evalue=0); Clostridium acetobutylicum CAC2970 PatB; PLP-dependent aminotransferase, (45.1% evalue=1.E-100); aminotransferase complement(3221924..3223105) Yersinia pseudotuberculosis IP 32953 2954425 YP_071237.1 CDS YPTB2727 NC_006155.1 3223806 3225224 D similar to Yersinia pestis YPO3007 membrane protein (99.7% evalue=0); Anabaena all1782 hypothetical protein (27.5% evalue=3.E-34); hypothetical protein 3223806..3225224 Yersinia pseudotuberculosis IP 32953 2954426 YP_071238.1 CDS YPTB2728 NC_006155.1 3225469 3227013 D similar to Yersinia pestis YPO3008 two-component sensor histidine kinase (100% evalue=0); S. pneumoniae_R6spr1894 phoR pnpS; histidine kinase (33.9% evalue=1.E-31); two-component sensor histidine kinase 3225469..3227013 Yersinia pseudotuberculosis IP 32953 2954427 YP_071239.1 CDS YPTB2729 NC_006155.1 3227010 3227717 D similar to Yersinia pestis YPO3009 two-component response regulator (99.5% evalue=1.E-133); C. perfringens CPE0642 two-component response regulator (42.7% evalue=1.E-49); two-component response regulator 3227010..3227717 Yersinia pseudotuberculosis IP 32953 2954428 YP_071240.1 CDS cysM NC_006155.1 3229562 3230455 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(3229562..3230455) Yersinia pseudotuberculosis IP 32953 2955409 YP_071241.1 CDS cysA NC_006155.1 3230626 3231717 R similar to Yersinia pestis YPO3012 cysA; sulfate transport ATP-binding protein (99.7% evalue=0); Escherichia coli ECs3293 ATP-binding component of sulfate permease A protein; chromate resistance (77.9% evalue=1.E-161); sulfate/thiosulfate transporter subunit complement(3230626..3231717) Yersinia pseudotuberculosis IP 32953 2955398 YP_071242.1 CDS cysW NC_006155.1 3231707 3232582 R Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit complement(3231707..3232582) Yersinia pseudotuberculosis IP 32953 2955416 YP_071243.1 CDS cysT NC_006155.1 3232582 3233415 R similar to Yersinia pestis YPO3014 cysT; sulfate transport system permease CysT (100% evalue=1.E-153); Escherichia coli b2424 cysU, cysT; sulfate transport system permease (85.9% evalue=1.E-133); sulfate/thiosulfate transporter subunit complement(3232582..3233415) Yersinia pseudotuberculosis IP 32953 2955415 YP_071244.1 CDS cysP NC_006155.1 3233415 3234452 R similar to Yersinia pestis YPO3015 cysP; thiosulfate-binding protein (100% evalue=0); Escherichia coli Z3690 cysP; thiosulfate binding protein (74.3% evalue=1.E-146); thiosulfate transporter subunit complement(3233415..3234452) Yersinia pseudotuberculosis IP 32953 2955412 YP_071245.1 CDS nanT NC_006155.1 3234785 3236317 R similar to Yersinia pestis YPO3016 nanT; sugar transporter (99.8% evalue=0); Escherichia coli b3224 nanT; sialic acid transporter (76.1% evalue=0); sialic acid transporter complement(3234785..3236317) Yersinia pseudotuberculosis IP 32953 2956125 YP_071246.1 CDS YPTB2737 NC_006155.1 3236922 3237800 R similar to Yersinia pestis YPO3017 rpiR-family transcriptional regulatory protein (99.3% evalue=1.E-157); Salmonella typhimurium STM1127 transcriptional regulator (69.7% evalue=1.E-103); rpiR family transcriptional regulatory protein complement(3236922..3237800) Yersinia pseudotuberculosis IP 32953 2954430 YP_071247.1 CDS YPTB2738 NC_006155.1 3237990 3238460 R similar to Yersinia pestis YPO3019 conserved hypothetical protein (98.6% evalue=9.E-84); Pasteurella multocida PM1713 hypothetical HI0227 (52.5% evalue=9.E-33); hypothetical protein complement(3237990..3238460) Yersinia pseudotuberculosis IP 32953 2954431 YP_071248.1 CDS YPTB2739 NC_006155.1 3238542 3239414 R catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase complement(3238542..3239414) Yersinia pseudotuberculosis IP 32953 2954432 YP_071249.1 CDS YPTB2740 NC_006155.1 3239683 3240822 D similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (36.2% evalue=3.E-47); hypothetical protein 3239683..3240822 Yersinia pseudotuberculosis IP 32953 2954433 YP_071250.1 CDS YPTB2741 NC_006155.1 3241090 3241791 D Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 3241090..3241791 Yersinia pseudotuberculosis IP 32953 2954434 YP_071251.1 CDS nanA NC_006155.1 3241854 3242747 D similar to Yersinia pestis YPO3024 nanA, npl; probable N-acetylneuraminate lyase (100% evalue=1.E-170); Vibrio cholerae VC1776 N-acetylneuraminate lyase, (75% evalue=1.E-126); N-acetylneuraminate lyase 3241854..3242747 Yersinia pseudotuberculosis IP 32953 2956124 YP_071252.1 CDS YPTB2743 NC_006155.1 3242845 3243744 R similar to Yersinia pestis YPO3025 conserved hypothetical protein (99.6% evalue=1.E-172); Salmonella typhi STY2683 conserved hypothetical protein (67.6% evalue=1.E-113); hypothetical protein complement(3242845..3243744) Yersinia pseudotuberculosis IP 32953 2954435 YP_071253.1 CDS yfeY NC_006155.1 3243922 3244533 R similar to Yersinia pestis YPO3026 yfeY; lipoprotein (100% evalue=1.E-115); Escherichia coli JW2425 hypothetical protein (55.4% evalue=4.E-57); hypothetical protein complement(3243922..3244533) Yersinia pseudotuberculosis IP 32953 2957024 YP_071254.1 CDS ygiW NC_006155.1 3244896 3245309 D similar to Yersinia pestis YPO3027 ygiW; exported protein (100% evalue=7.E-75); Salmonella typhi STY3353 possible exported protein (58.8% evalue=1.E-39); hypothetical protein 3244896..3245309 Yersinia pseudotuberculosis IP 32953 2957053 YP_071255.1 CDS YPTB2746 NC_006155.1 3245878 3248088 D similar to Yersinia pestis YPO3028 autotransporter (99.4% evalue=0); pertactin family virulence factor/autotransporter 3245878..3248088 Yersinia pseudotuberculosis IP 32953 2954436 YP_071256.1 CDS YPTB2747 NC_006155.1 3248180 3248596 R similar to Yersinia pestis YPO3029 membrane protein (99.2% evalue=1.E-71); hypothetical protein complement(3248180..3248596) Yersinia pseudotuberculosis IP 32953 2954437 YP_071257.1 CDS YPTB2749 NC_006155.1 3249394 3250119 R part of possible compound transposon with IS630; hypothetical protein complement(3249394..3250119) Yersinia pseudotuberculosis IP 32953 2954439 YP_071258.1 CDS YPTB2750 NC_006155.1 3250122 3250829 R part of possible compound transposon with IS630; hypothetical protein complement(3250122..3250829) Yersinia pseudotuberculosis IP 32953 2954440 YP_071259.1 CDS YPTB2751 NC_006155.1 3250826 3251497 R part of possible compound transposon with IS630; hypothetical protein complement(3250826..3251497) Yersinia pseudotuberculosis IP 32953 2954441 YP_071260.1 CDS YPTB2753 NC_006155.1 3252467 3252892 R similar to Yersinia pestis YPO3031 acetyltransferase (100% evalue=8.E-80); Salmonella typhimurium STM2449 acetyltransferase (78% evalue=3.E-64); acetyltransferase complement(3252467..3252892) Yersinia pseudotuberculosis IP 32953 2954443 YP_071261.1 CDS hemF NC_006155.1 3253174 3254103 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3253174..3254103 Yersinia pseudotuberculosis IP 32953 2955778 YP_071262.1 CDS YPTB2755 NC_006155.1 3254103 3254561 D similar to Yersinia pestis YPO3033 conserved hypothetical protein (100% evalue=7.E-83); Escherichia coli ECs0436 hypothetical protein (76.9% evalue=3.E-59); hypothetical protein 3254103..3254561 Yersinia pseudotuberculosis IP 32953 2954444 YP_071263.1 CDS maeB NC_006155.1 3254726 3257005 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3254726..3257005) Yersinia pseudotuberculosis IP 32953 2955983 YP_071264.1 CDS YPTB2757 NC_006155.1 3257744 3258367 R similar to Yersinia pestis YPO3035 conserved hypothetical protein (100% evalue=1.E-112); Escherichia coli Z3723 yffH; orf, hypothetical protein (60.7% evalue=1.E-60); hypothetical protein complement(3257744..3258367) Yersinia pseudotuberculosis IP 32953 2954445 YP_071265.1 CDS napC NC_006155.1 3258524 3259123 R with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC complement(3258524..3259123) Yersinia pseudotuberculosis IP 32953 2956128 YP_071266.1 CDS napB NC_006155.1 3259151 3259618 R small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit complement(3259151..3259618) Yersinia pseudotuberculosis IP 32953 2956127 YP_071267.1 CDS napA NC_006155.1 3259701 3262193 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(3259701..3262193) Yersinia pseudotuberculosis IP 32953 2956126 YP_071268.1 CDS napD NC_006155.1 3262190 3262456 R similar to Yersinia pestis YPO3039 napD; conserved hypothetical protein (100% evalue=2.E-45); Escherichia coli ECs3096 hypothetical protein (55.4% evalue=1.E-19); assembly protein for periplasmic nitrate reductase complement(3262190..3262456) Yersinia pseudotuberculosis IP 32953 2956129 YP_071269.1 CDS napF NC_006155.1 3262446 3262949 R similar to Yersinia pestis YPO3040 napF; ferredoxin-type protein NapF (99.4% evalue=4.E-97); Escherichia coli ECs3097 ferredoxin-type protein (52.8% evalue=6.E-47); ferredoxin-type protein NapF complement(3262446..3262949) Yersinia pseudotuberculosis IP 32953 2956130 YP_071270.1 CDS narP NC_006155.1 3263782 3264411 D similar to Yersinia pestis YPO3041 narP; nitrate/nitrite response regulator protein NarP (100% evalue=1.E-113); Salmonella typhimurium STM2246 narP; response regulator in two-component regulatory system with NarQ (or NarX) (68.6% evalue=2.E-71); nitrate/nitrite response regulator protein NarP 3263782..3264411 Yersinia pseudotuberculosis IP 32953 2956131 YP_071271.1 CDS YPTB2764 NC_006155.1 3264424 3264702 R similar to Yersinia pestis YPO3042 conserved hypothetical protein (100% evalue=7.E-50); Vibrio cholerae VC2149 hypothetical protein (58.2% evalue=3.E-27); hypothetical protein complement(3264424..3264702) Yersinia pseudotuberculosis IP 32953 2954446 YP_071272.1 CDS YPTB2765 NC_006155.1 3265117 3268248 D similar to Yersinia pestis YPO3043 multidrug efflux protein (99.9% evalue=0); Salmonella typhi STY2719 acrD; efflux pump (80.6% evalue=0); aminoglycoside/multidrug efflux system 3265117..3268248 Yersinia pseudotuberculosis IP 32953 2954447 YP_071273.1 CDS YPTB2766 NC_006155.1 3268479 3269063 D similar to Yersinia pestis YPO3044 hypothetical protein (100% evalue=1.E-112); hypothetical protein 3268479..3269063 Yersinia pseudotuberculosis IP 32953 2954448 YP_071274.1 CDS ybcI NC_006155.1 3269352 3269900 D similar to Yersinia pestis YPO3045 ybcI; membrane protein (100% evalue=1.E-102); Salmonella typhimurium STM0540 ybcI; membrane-bound metal-dependent hydrolases (72.6% evalue=5.E-71); hypothetical protein 3269352..3269900 Yersinia pseudotuberculosis IP 32953 2956962 YP_071275.1 CDS YPTB2768 NC_006155.1 3270647 3271822 R similar to Yersinia pestis YPO3046 sulfatase modifier protein (99.7% evalue=0); Escherichia coli ECs2102 enzyme (66% evalue=1.E-156); sulfatase modifier protein complement(3270647..3271822) Yersinia pseudotuberculosis IP 32953 2954449 YP_071276.1 CDS ydeN NC_006155.1 3271879 3273552 R similar to Yersinia pestis YPO3047 ydeN; sulfatase (100% evalue=0); Escherichia coli JW1493 hypothetical protein (80% evalue=0); sulfatase complement(3271879..3273552) Yersinia pseudotuberculosis IP 32953 2956988 YP_071277.1 CDS YPTB2770 NC_006155.1 3274030 3275100 R similar to Yersinia pestis YPO3048 probable ABC-transporter, ATP-binding protein (99.7% evalue=0); Ralstonia solanacearum RS00150 probable ATP-binding ABC transporter protein (69.4% evalue=1.E-133); ABC transporter ATP-binding protein complement(3274030..3275100) Yersinia pseudotuberculosis IP 32953 2954450 YP_071278.1 CDS YPTB2771 NC_006155.1 3275093 3276862 R similar to Yersinia pestis YPO3049 binding protein-dependent transport system, inner-membrane component (99.8% evalue=0); Ralstonia solanacearum RS00151 transmembrane ABC transporter protein (70.2% evalue=0); iron ABC transporter permease complement(3275093..3276862) Yersinia pseudotuberculosis IP 32953 2954451 YP_071279.1 CDS YPTB2772 NC_006155.1 3276957 3278045 R similar to Yersinia pestis YPO3050 exported protein (99.7% evalue=0); Ralstonia solanacearum RS00344 periplasmic iron-binding signal peptide protein (62.1% evalue=1.E-125); iron ABC transporter substrate-binding protein complement(3276957..3278045) Yersinia pseudotuberculosis IP 32953 2954452 YP_071280.1 CDS YPTB2773 NC_006155.1 3278356 3278829 D similar to Yersinia pestis YPO3051 conserved hypothetical protein (100% evalue=4.E-83); Listeria innocua lin0965 lin0965 (38.6% evalue=4.E-22); hypothetical protein 3278356..3278829 Yersinia pseudotuberculosis IP 32953 2954453 YP_071281.1 CDS YPTB2774 NC_006155.1 3278989 3279387 D similar to Yersinia pestis YPO3052 conserved hypothetical protein (100% evalue=3.E-74); Escherichia coli ECs3333 hypothetical protein (69.9% evalue=8.E-40); hypothetical protein 3278989..3279387 Yersinia pseudotuberculosis IP 32953 2954454 YP_071282.1 CDS dapE NC_006155.1 3279389 3280516 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3279389..3280516 Yersinia pseudotuberculosis IP 32953 2955429 YP_071283.1 CDS YPTB2776 NC_006155.1 3280513 3281190 D similar to Yersinia pestis YPO3054 carboxypeptidase (100% evalue=1.E-132); Pasteurella multocida PM1021 hypothetical HI0101 (48.8% evalue=8.E-58); carboxypeptidase 3280513..3281190 Yersinia pseudotuberculosis IP 32953 2954455 YP_071284.2 CDS YPTB2777 NC_006155.1 3281258 3281452 D similar to Yersinia pestis YPO3055 membrane protein (100% evalue=3.E-35); Salmonella typhi STY2722 membrane protein (69.6% evalue=1.E-22); hypothetical protein 3281258..3281452 Yersinia pseudotuberculosis IP 32953 2954456 YP_071285.1 CDS YPTB2778 NC_006155.1 3281700 3283751 R similar to Yersinia pestis YPO3056 acetyltransferase (99.2% evalue=0); Escherichia coli Z3733 ypfI; orf, hypothetical protein (52.3% evalue=0); acetyltransferase complement(3281700..3283751) Yersinia pseudotuberculosis IP 32953 2954457 YP_071286.1 CDS yeaL NC_006155.1 3283753 3284205 R similar to Yersinia pestis YPO3057 yeaL; membrane protein (100% evalue=9.E-77); Salmonella typhi STY1838 membrane protein (72.4% evalue=7.E-58); hypothetical protein complement(3283753..3284205) Yersinia pseudotuberculosis IP 32953 2956998 YP_071287.1 CDS YPTB2780 NC_006155.1 3284299 3285168 R similar to Yersinia pestis YPO3058 membrane protein (99.6% evalue=1.E-167); Salmonella typhimurium STM2486 inner membrane protein (76.4% evalue=1.E-125); hypothetical protein complement(3284299..3285168) Yersinia pseudotuberculosis IP 32953 2954458 YP_071288.1 CDS purC NC_006155.1 3285387 3286100 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(3285387..3286100) Yersinia pseudotuberculosis IP 32953 2956368 YP_071289.1 CDS dapX NC_006155.1 3286171 3287229 R similar to Yersinia pestis YPO3061 dapX, nlpB; lipoprotein (99.7% evalue=0); Salmonella typhimurium STM2488 nlpB; lipoprotein-34 (62% evalue=1.E-120); lipoprotein complement(3286171..3287229) Yersinia pseudotuberculosis IP 32953 2955431 YP_071290.1 CDS dapA NC_006155.1 3287247 3288146 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(3287247..3288146) Yersinia pseudotuberculosis IP 32953 2955426 YP_071291.2 CDS gcvR NC_006155.1 3288293 3288862 D negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 3288293..3288862 Yersinia pseudotuberculosis IP 32953 2955681 YP_071292.1 CDS bcp NC_006155.1 3288865 3289335 D bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3288865..3289335 Yersinia pseudotuberculosis IP 32953 2955274 YP_071293.1 CDS YPTB2786 NC_006155.1 3289579 3289998 R similar to Yersinia pestis YPO3065 exported protein, 100% identical; hypothetical protein complement(3289579..3289998) Yersinia pseudotuberculosis IP 32953 2954459 YP_071294.1 CDS YPTB2787 NC_006155.1 3290002 3290697 R similar to Yersinia pestis YPO3066 hypothetical protein (99.1% evalue=1.E-133); hypothetical protein complement(3290002..3290697) Yersinia pseudotuberculosis IP 32953 2954460 YP_071295.1 CDS YPTB2788 NC_006155.1 3291035 3291208 D similar to Yersinia pestis YPO3067 hypothetical protein, 100% identical.; hypothetical protein 3291035..3291208 Yersinia pseudotuberculosis IP 32953 2954461 YP_071296.1 CDS perM NC_006155.1 3291297 3292361 R similar to Yersinia pestis YPO3068 perM; membrane protein (100% evalue=0); Salmonella typhimurium STM2493 perM; PerM family permease (77.6% evalue=1.E-161); permease complement(3291297..3292361) Yersinia pseudotuberculosis IP 32953 2956237 YP_071297.1 CDS YPTB2790 NC_006155.1 3292692 3294176 D similar to Yersinia pestis YPO3069 exported protein (99.3% evalue=0); Escherichia coli b2494 hypothetical protein (69.3% evalue=0); hypothetical protein 3292692..3294176 Yersinia pseudotuberculosis IP 32953 2954462 YP_071298.1 CDS yfgD NC_006155.1 3294283 3294639 D similar to Yersinia pestis YPO3070 yfgD; arsenate reductase (100% evalue=8.E-62); Escherichia coli ECs3357 oxidoreductase (67.2% evalue=4.E-40); arsenate reductase 3294283..3294639 Yersinia pseudotuberculosis IP 32953 2957026 YP_071299.2 CDS YPTB2792 NC_006155.1 3294852 3295571 R controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor complement(3294852..3295571) Yersinia pseudotuberculosis IP 32953 2954463 YP_071300.1 CDS YPTB2793 NC_006155.1 3295818 3297104 R similar to Escherichia coli ECs3359 uracil transport (89.3% evalue=0); Escherichia coli Z3760 uraA; uracil transport (89.3% evalue=0); uracil transporter complement(3295818..3297104) Yersinia pseudotuberculosis IP 32953 2954464 YP_071301.1 CDS upp NC_006155.1 3297261 3297887 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(3297261..3297887) Yersinia pseudotuberculosis IP 32953 2956868 YP_071302.1 CDS purI NC_006155.1 3298322 3299365 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3298322..3299365 Yersinia pseudotuberculosis IP 32953 2956373 YP_071303.1 CDS purN NC_006155.1 3299480 3300118 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3299480..3300118 Yersinia pseudotuberculosis IP 32953 2956376 YP_071304.1 CDS speG NC_006155.1 3300347 3300892 D similar to Yersinia pestis YPO2830 speG; spermidine acetyltransferase (100% evalue=1.E-102); Escherichia coli JW1576 speG; diamine N-acetyltransferase (80.1% evalue=5.E-80); spermidine acetyltransferase 3300347..3300892 Yersinia pseudotuberculosis IP 32953 2956627 YP_071305.1 CDS fliB NC_006155.1 3300986 3302146 R similar to Salmonella typhimurium STM1958 fliB; N-methylation of lysine residues in flagellin (30% evalue=1.E-52); C. perfringens CPE0799 hypothetical protein (23.4% evalue=3.E-14); N-methylation of lysine residues in flagellin complement(3300986..3302146) Yersinia pseudotuberculosis IP 32953 2955593 YP_071306.1 CDS pstb NC_006155.1 3302379 3303191 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(3302379..3303191) Yersinia pseudotuberculosis IP 32953 2956350 YP_071307.1 CDS pstA NC_006155.1 3303219 3304931 R similar to Yersinia pestis YPO2834 pstA; phosphate transport system permease (99.8% evalue=0); Vibrio cholerae VC0725 phosphate transport system permease (52.7% evalue=1.E-158); phosphate ABC transporter permease complement(3303219..3304931) Yersinia pseudotuberculosis IP 32953 2956347 YP_071308.1 CDS pstC NC_006155.1 3304931 3307162 R similar to Yersinia pestis YPO2835 pstC; phosphate transport system permease (99.5% evalue=0); Pseudomonas aeruginosa PA5368 pstC; phosphate transport system permease (42.2% evalue=1.E-137); phosphate ABC transporter permease complement(3304931..3307162) Yersinia pseudotuberculosis IP 32953 2956352 YP_071309.1 CDS ppk NC_006155.1 3307433 3309496 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3307433..3309496 Yersinia pseudotuberculosis IP 32953 2956310 YP_071310.1 CDS ppx NC_006155.1 3309507 3311066 D similar to Yersinia pestis YPO2837 ppx; exopolyphosphatase (100% evalue=0); Salmonella typhi STY2743 ppx; exopolyphosphatase (77.3% evalue=0); exopolyphosphatase 3309507..3311066 Yersinia pseudotuberculosis IP 32953 2956312 YP_071311.1 CDS yfgG NC_006155.1 3311231 3311443 D similar to Yersinia pestis YPO2838 yfgG; exported protein (98.5% evalue=9.E-33); hypothetical protein 3311231..3311443 Yersinia pseudotuberculosis IP 32953 2957027 YP_071312.1 CDS mgtE NC_006155.1 3311495 3312970 D similar to Yersinia pestis YPO2839 mgtE; divalent cation transport protein (100% evalue=0); Pseudomonas aeruginosa PA0913 mgtE; probable Mg transporter MgtE (54.3% evalue=1.E-139); divalent cation (Mg++/Co++/Ni++) transport protein 3311495..3312970 Yersinia pseudotuberculosis IP 32953 2956040 YP_071313.1 CDS YPTB2806 NC_006155.1 3313107 3314462 D similar to Yersinia pestis YPO2840 heat shock protein (99.5% evalue=0); Escherichia coli ECs2878 heat shock protein (72.4% evalue=0); chaperone 3313107..3314462 Yersinia pseudotuberculosis IP 32953 2954465 YP_071314.1 CDS YPTB2807 NC_006155.1 3314734 3315582 R similar to Yersinia pestis YPO2841 ABC transporter permease (100% evalue=1.E-154); Pseudomonas aeruginosa PA0606 spermidine/putrescine transport system permease (65.3% evalue=8.E-91); opine/polyamine ABC transporter permease complement(3314734..3315582) Yersinia pseudotuberculosis IP 32953 2954466 YP_071315.1 CDS YPTB2808 NC_006155.1 3315644 3316909 R similar to Yersinia pestis YPO2842 ABC transporter permease (99.7% evalue=0); Pseudomonas aeruginosa PA0605 spermidine/putrescine transport system permease (54.5% evalue=1.E-121); opine/polyamine ABC transporter permease complement(3315644..3316909) Yersinia pseudotuberculosis IP 32953 2954467 YP_071316.1 CDS YPTB2809 NC_006155.1 3316956 3317984 R similar to Yersinia pestis YPO2843 transport system periplasmic protein (99.4% evalue=0); Pseudomonas aeruginosa PA0222 spermidine/putrescine transport system substrate-binding protein (56.1% evalue=1.E-116); opine/polyamine ABC transporter substrate-binding protein complement(3316956..3317984) Yersinia pseudotuberculosis IP 32953 2954468 YP_071317.1 CDS goaG NC_006155.1 3318037 3319350 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(3318037..3319350) Yersinia pseudotuberculosis IP 32953 2955736 YP_071318.1 CDS YPTB2811 NC_006155.1 3319508 3321013 D similar to Yersinia pestis YPO2845 GntR-family regulatory protein (99.6% evalue=0); Ralstonia solanacearum RS01853 transcription regulator protein (47% evalue=1.E-124); GntR family transcriptional regulator 3319508..3321013 Yersinia pseudotuberculosis IP 32953 2954469 YP_071319.1 CDS YPTB2812 NC_006155.1 3321396 3322481 D similar to Yersinia pestis YPO2846 putitive ABC-transporter ATP-binding protein (99.7% evalue=0); Pseudomonas aeruginosa PA0603 spermidine/putrescine transport system ATP-binding protein (60.7% evalue=1.E-119); opine/polyamine ABC transporter ATP-binding protein 3321396..3322481 Yersinia pseudotuberculosis IP 32953 2954470 YP_071320.2 CDS yegM NC_006155.1 3322883 3324217 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3322883..3324217 Yersinia pseudotuberculosis IP 32953 2957008 YP_071321.1 CDS yegN NC_006155.1 3324217 3327375 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3324217..3327375 Yersinia pseudotuberculosis IP 32953 2957009 YP_071322.1 CDS yegO NC_006155.1 3327372 3330446 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3327372..3330446 Yersinia pseudotuberculosis IP 32953 2957010 YP_071323.1 CDS yegB NC_006155.1 3330480 3331877 D similar to Yersinia pestis YPO2850 yegB; membrane protein (99.7% evalue=0); Escherichia coli JW2062 yegB; Hypothetical protein (72.3% evalue=0); multidrug efflux system protein MdtE 3330480..3331877 Yersinia pseudotuberculosis IP 32953 2957007 YP_071324.1 CDS baeS NC_006155.1 3331908 3333293 D similar to Salmonella typhi STY2343 baeS; two-component system sensor kinase (66.8% evalue=1.E-171); Salmonella typhimurium STM2130 baeS; sensory kinase in two-component regulatoyr system wtih BaeR (67.2% evalue=1.E-173); signal transduction histidine-protein kinase BaeS 3331908..3333293 Yersinia pseudotuberculosis IP 32953 2955270 YP_071325.1 CDS baeR NC_006155.1 3333303 3334022 D response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3333303..3334022 Yersinia pseudotuberculosis IP 32953 2955269 YP_071326.1 CDS YPTB2819 NC_006155.1 3334159 3334497 D similar to Yersinia pestis YPO2854 conserved hypothetical protein (100% evalue=4.E-58); Pasteurella multocida PM0519 hypothetical Escherichia coli (61.2% evalue=2.E-32); hypothetical protein 3334159..3334497 Yersinia pseudotuberculosis IP 32953 2954471 YP_071327.1 CDS YPTB2820 NC_006155.1 3334795 3336189 D similar to Yersinia pestis YPO2855 protease (100% evalue=0); Escherichia coli JW2066 yegQ; protease (83.4% evalue=0); protease 3334795..3336189 Yersinia pseudotuberculosis IP 32953 2954472 YP_071328.1 CDS YPTB2821 NC_006155.1 3336826 3337716 D cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 3336826..3337716 Yersinia pseudotuberculosis IP 32953 2954473 YP_071329.1 CDS YPTB2822 NC_006155.1 3338003 3338512 R similar to Yersinia pestis YPO2857 exported protein (99.3% evalue=5.E-89); Pseudomonas aeruginosa PA3902 hypothetical protein (42.8% evalue=3.E-30); hypothetical protein complement(3338003..3338512) Yersinia pseudotuberculosis IP 32953 2954474 YP_071330.1 CDS YPTB2823 NC_006155.1 3338743 3339663 D similar to Yersinia pestis YPO2858 hypothetical protein (97.9% evalue=1.E-140); hypothetical protein 3338743..3339663 Yersinia pseudotuberculosis IP 32953 2954475 YP_071331.1 CDS thiD NC_006155.1 3339691 3340491 R catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase complement(3339691..3340491) Yersinia pseudotuberculosis IP 32953 2956689 YP_071332.1 CDS YPTB2825 NC_006155.1 3341001 3341480 D similar to Yersinia pestis YPO3895 membrane protein (52.8% evalue=1.E-48); hypothetical protein 3341001..3341480 Yersinia pseudotuberculosis IP 32953 2954476 YP_071333.1 CDS YPTB2826 NC_006155.1 3341539 3342459 D similar to Yersinia pestis YPO4106 hypothetical protein (54.1% evalue=8.E-55); hypothetical protein 3341539..3342459 Yersinia pseudotuberculosis IP 32953 2954477 YP_071334.1 CDS YPTB2827 NC_006155.1 3342456 3342851 D similar to Yersinia pestis YPO2864 membrane protein, 100% identical.; hypothetical protein 3342456..3342851 Yersinia pseudotuberculosis IP 32953 2954478 YP_071335.1 CDS YPTB2828 NC_006155.1 3342915 3343310 D similar to Yersinia pestis YPO2865 membrane protein, 93% identical; hypothetical protein 3342915..3343310 Yersinia pseudotuberculosis IP 32953 2954479 YP_071336.1 CDS YPTB2829 NC_006155.1 3343348 3343767 D similar to Yersinia pestis YPO2866 membrane protein (73.3% evalue=1.E-54); hypothetical protein 3343348..3343767 Yersinia pseudotuberculosis IP 32953 2954480 YP_071337.1 CDS YPTB2830 NC_006155.1 3343831 3344229 D similar to Yersinia pestis YPO2868 conserved hypothetical protein, 92% identical.; hypothetical protein 3343831..3344229 Yersinia pseudotuberculosis IP 32953 2954481 YP_071338.1 CDS YPTB2831 NC_006155.1 3344253 3344732 D similar to Yersinia pestis YPO2868 conserved hypothetical protein, 99% identical; hypothetical protein 3344253..3344732 Yersinia pseudotuberculosis IP 32953 2954482 YP_071339.1 CDS guaA NC_006155.1 3345011 3346588 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3345011..3346588) Yersinia pseudotuberculosis IP 32953 2955762 YP_071340.1 CDS guaB NC_006155.1 3346768 3348315 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3346768..3348315) Yersinia pseudotuberculosis IP 32953 2955763 YP_071341.1 CDS xseA NC_006155.1 3348401 3349780 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3348401..3349780 Yersinia pseudotuberculosis IP 32953 2956909 YP_071342.1 CDS YPTB2835 NC_006155.1 3349952 3350176 R similar to Yersinia pestis YPO2873 conserved hypothetical protein (97.2% evalue=1.E-41); Salmonella typhi STY2763a conserved hypothetical protein (61.7% evalue=2.E-21); hypothetical protein complement(3349952..3350176) Yersinia pseudotuberculosis IP 32953 2954483 YP_071343.1 CDS YPTB2836 NC_006155.1 3350225 3351181 R similar to Yersinia pestis YPO2874 membrane protein (99.3% evalue=1.E-174); Vibrio cholerae VCA0024 conserved hypothetical protein (43.4% evalue=3.E-67); malate permease complement(3350225..3351181) Yersinia pseudotuberculosis IP 32953 2954484 YP_071344.1 CDS engA NC_006155.1 3351528 3353015 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3351528..3353015) Yersinia pseudotuberculosis IP 32953 2955506 YP_071345.1 CDS yfgL NC_006155.1 3353163 3354344 R with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL complement(3353163..3354344) Yersinia pseudotuberculosis IP 32953 2957028 YP_071346.1 CDS yfgM NC_006155.1 3354356 3354991 R similar to Yersinia pestis YPO2877 yfgM; membrane protein (99.5% evalue=1.E-112); Salmonella typhimurium STM2521 yfgM; inner membrane protein (58.5% evalue=1.E-64); hypothetical protein complement(3354356..3354991) Yersinia pseudotuberculosis IP 32953 2957029 YP_071347.1 CDS hisS NC_006155.1 3355005 3356279 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3355005..3356279) Yersinia pseudotuberculosis IP 32953 2955801 YP_071348.1 CDS ispG NC_006155.1 3356488 3357615 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(3356488..3357615) Yersinia pseudotuberculosis IP 32953 2955150 YP_071349.1 CDS yfgA NC_006155.1 3357719 3358807 R similar to Yersinia pestis YPO2880 yfgA; DNA-binding protein (92.8% evalue=0); Salmonella typhimurium STM2524 yfgA; paral membrane protein (57.9% evalue=1.E-106); cytoskeletal protein RodZ complement(3357719..3358807) Yersinia pseudotuberculosis IP 32953 2957025 YP_071350.1 CDS YPTB2843 NC_006155.1 3358797 3359546 R similar to Yersinia pestis YPO2881 fimbrial biogenesis protein (99.5% evalue=1.E-139); Vibrio cholerae VC1612 fimbrial biogenesis and twitching motility protein, (37.1% evalue=2.E-30); fimbrial biogenesis protein complement(3358797..3359546) Yersinia pseudotuberculosis IP 32953 2954485 YP_071351.1 CDS YPTB2844 NC_006155.1 3359700 3360896 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(3359700..3360896) Yersinia pseudotuberculosis IP 32953 2954486 YP_071352.1 CDS ndk NC_006155.1 3361158 3361586 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(3361158..3361586) Yersinia pseudotuberculosis IP 32953 2956134 YP_071353.1 CDS YPTB2846 NC_006155.1 3361914 3364334 R similar to Yersinia pestis YPO2884 exported protein (94.9% evalue=0); hypothetical protein complement(3361914..3364334) Yersinia pseudotuberculosis IP 32953 2954487 YP_071354.1 CDS YPTB2847 NC_006155.1 3364509 3364766 D similar to Yersinia pestis YPO2885 hypothetical protein (96.4% evalue=5.E-41); hypothetical protein 3364509..3364766 Yersinia pseudotuberculosis IP 32953 2954488 YP_071355.1 CDS yapA NC_006155.1 3365050 3369399 D similar to Yersinia pestis YPO2886 yapA; autotransporter protein (79% evalue=0); Escherichia coli JW2628 ypjA; Hypothetical protein (f949) (27.1% evalue=8.E-79); pertactin family virulence factor/autotransporter 3365050..3369399 Yersinia pseudotuberculosis IP 32953 2956946 YP_071356.1 CDS yapB2 NC_006155.1 3369957 3373322 D similar to Yersinia pestis YPO2886 yapA; autotransporter protein (43.2% evalue=0); pertactin family virulence factor/autotransporter 3369957..3373322 Yersinia pseudotuberculosis IP 32953 2956948 YP_071357.1 CDS yapB1 NC_006155.1 3373929 3377444 D similar to Yersinia pestis YPO2886 yapA; autotransporter protein (38.8% evalue=0); Escherichia coli Z3449 yejO; ATP-binding component of a transport system (26.9% evalue=1.E-68); pertactin family virulence factor/autotransporter 3373929..3377444 Yersinia pseudotuberculosis IP 32953 2956947 YP_071358.1 CDS YPTB2851 NC_006155.1 3377529 3378482 R enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB complement(3377529..3378482) Yersinia pseudotuberculosis IP 32953 2954489 YP_071359.1 CDS pepB NC_006155.1 3378561 3379859 R catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase complement(3378561..3379859) Yersinia pseudotuberculosis IP 32953 2956231 YP_071360.1 CDS YPTB2853 NC_006155.1 3379999 3380199 R similar to Yersinia pestis YPO2890 conserved hypothetical protein (100% evalue=2.E-34); Escherichia coli JW2508 yfhJ; Hypothetical protein (77.2% evalue=3.E-26); hypothetical protein complement(3379999..3380199) Yersinia pseudotuberculosis IP 32953 2954490 YP_071361.1 CDS fdx NC_006155.1 3380229 3380564 R similar to Yersinia pestis YPO2891 fdx; adrenodoxin family ferredoxin (100% evalue=3.E-62); Escherichia coli JW2509 fdx; Ferredoxin [2Fe-2S] (91.8% evalue=3.E-57); ferredoxin complement(3380229..3380564) Yersinia pseudotuberculosis IP 32953 2955540 YP_071362.1 CDS hscA NC_006155.1 3380567 3382501 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(3380567..3382501) Yersinia pseudotuberculosis IP 32953 2955836 YP_071363.1 CDS hscB NC_006155.1 3382744 3383268 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(3382744..3383268) Yersinia pseudotuberculosis IP 32953 2955837 YP_071364.1 CDS iscA NC_006155.1 3383379 3383702 R forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein complement(3383379..3383702) Yersinia pseudotuberculosis IP 32953 2954491 YP_071365.1 CDS nifU NC_006155.1 3383972 3384358 R similar to Yersinia pestis YPO2895 nifU; NifU family protein (99.2% evalue=2.E-68); Escherichia coli Z3796 hypothetical protein (89% evalue=1.E-61); scaffold protein complement(3383972..3384358) Yersinia pseudotuberculosis IP 32953 2956141 YP_071366.1 CDS iscS NC_006155.1 3384389 3385618 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(3384389..3385618) Yersinia pseudotuberculosis IP 32953 2955897 YP_071367.1 CDS YPTB2860 NC_006155.1 3385672 3386166 R regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR complement(3385672..3386166) Yersinia pseudotuberculosis IP 32953 2954492 YP_071368.1 CDS YPTB2861 NC_006155.1 3386322 3387095 R similar to Yersinia pestis YPO2898 SpoU-family rRNA methylase (100% evalue=1.E-144); Salmonella typhi STY2791 RNA methyltransferase (81.8% evalue=1.E-109); SpoU family rRNA methylase complement(3386322..3387095) Yersinia pseudotuberculosis IP 32953 2954493 YP_071369.1 CDS suhB NC_006155.1 3387214 3388017 D similar to Yersinia pestis YPO2899 suhB; myo-inositol-1(or 4)-monophosphatase (100% evalue=1.E-151); Escherichia coli b2533 suhB, ssyA; myo-inositol-1(or 4)-monophosphatase (83.8% evalue=1.E-129); inositol monophosphatase 3387214..3388017 Yersinia pseudotuberculosis IP 32953 2956651 YP_071370.1 CDS YPTB2863 NC_006155.1 3388116 3389138 R similar to Yersinia pestis YPO2901 membrane protein (99.7% evalue=0); Salmonella typhimurium STM2551 inner membrane protein (55% evalue=7.E-98); hypothetical protein complement(3388116..3389138) Yersinia pseudotuberculosis IP 32953 2954494 YP_071371.1 CDS YPTB2864 NC_006155.1 3389129 3389803 R similar to Yersinia pestis YPO2902 exported protein (99.5% evalue=1.E-125); Salmonella typhimurium STM2552 periplasmic or exported protein (55.3% evalue=2.E-62); hypothetical protein complement(3389129..3389803) Yersinia pseudotuberculosis IP 32953 2954495 YP_071372.1 CDS YPTB2865 NC_006155.1 3389945 3391306 D similar to Yersinia pestis YPO2903 RNA-binding protein (100% evalue=0); Escherichia coli b2535 csiE; stationary phase inducible protein csiE (37.4% evalue=5.E-81); stationary phase inducible protein CsiE 3389945..3391306 Yersinia pseudotuberculosis IP 32953 2954496 YP_071373.1 CDS hcaT NC_006155.1 3391303 3392460 R transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter complement(3391303..3392460) Yersinia pseudotuberculosis IP 32953 2955770 YP_071374.1 CDS ail NC_006155.1 3392902 3393450 R similar to Yersinia pestis YPO2905 ail; attachment invasion locus protein (99.4% evalue=1.E-101); attachment invasion locus protein complement(3392902..3393450) Yersinia pseudotuberculosis IP 32953 2955182 YP_071375.1 CDS YPTB2868 NC_006155.1 3393559 3393780 R similar to Yersinia pestis YPO2906 membrane protein, 100% identical; hypothetical protein complement(3393559..3393780) Yersinia pseudotuberculosis IP 32953 2954497 YP_071376.1 CDS glyA NC_006155.1 3393893 3395146 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3393893..3395146) Yersinia pseudotuberculosis IP 32953 2955727 YP_071377.1 CDS hmp NC_006155.1 3395687 3396877 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 3395687..3396877 Yersinia pseudotuberculosis IP 32953 2955804 YP_071378.1 CDS yhfZ NC_006155.1 3397341 3398240 D similar to Escherichia coli b3383 yhfZ; hypothetical 25.4 kD protein in cysG-trpS intergenic region (F228) (52.4% evalue=1.E-62); Escherichia coli JW3346 yhfZ; Hypothetical protein (52.4% evalue=1.E-62); hypothetical protein 3397341..3398240 Yersinia pseudotuberculosis IP 32953 2957063 YP_071379.1 CDS glnB NC_006155.1 3398422 3398760 R indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 complement(3398422..3398760) Yersinia pseudotuberculosis IP 32953 2955696 YP_071380.1 CDS nadE NC_006155.1 3398775 3400397 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(3398775..3400397) Yersinia pseudotuberculosis IP 32953 2956117 YP_071381.1 CDS YPTB2874 NC_006155.1 3400557 3401894 R similar to Yersinia pestis YPO2914 two-component system response regulator (100% evalue=0); Salmonella typhimurium STM2562 yfhA; transcriptional regulator of two-component regulator protein (EBP familiiy) (87.1% evalue=0); two-component system response regulator complement(3400557..3401894) Yersinia pseudotuberculosis IP 32953 2954498 YP_071382.1 CDS YPTB2875 NC_006155.1 3401857 3402969 R similar to Yersinia pestis YPO2915 lipoprotein (94.7% evalue=0); Escherichia coli JW2539 yfhG; Hypothetical protein (ORF-1) (46.1% evalue=8.E-45); hypothetical protein complement(3401857..3402969) Yersinia pseudotuberculosis IP 32953 2954499 YP_071383.1 CDS YPTB2876 NC_006155.1 3402973 3404409 R similar to Yersinia pestis YPO2916 two-component system sensor kinase (99.7% evalue=0); Salmonella typhimurium STM2564 yfhK; sensory kinase in regulatory system (72.4% evalue=0); two-component system sensor kinase complement(3402973..3404409) Yersinia pseudotuberculosis IP 32953 2954500 YP_071384.1 CDS YPTB2877 NC_006155.1 3405604 3406164 D similar to Yersinia pestis YPO2919 hypothetical protein (26.9% evalue=7.E-08); hypothetical protein 3405604..3406164 Yersinia pseudotuberculosis IP 32953 2954501 YP_071385.1 CDS YPTB2878 NC_006155.1 3406487 3407065 D similar to Yersinia pestis YPO2919 hypothetical protein (99.4% evalue=1.E-106); hypothetical protein 3406487..3407065 Yersinia pseudotuberculosis IP 32953 2954502 YP_071386.1 CDS purL NC_006155.1 3407482 3411372 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(3407482..3411372) Yersinia pseudotuberculosis IP 32953 2956375 YP_071387.1 CDS YPTB2880 NC_006155.1 3411607 3413148 D YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 3411607..3413148 Yersinia pseudotuberculosis IP 32953 2954503 YP_071388.1 CDS YPTB2881 NC_006155.1 3413275 3413838 R similar to Yersinia pestis YPO2923 zinc-binding protein (99.3% evalue=8.E-86); Escherichia coli b2559 yfhC; hypothetical 20.0 kD protein in purL-dpj intergenic region (ORF178) (71% evalue=6.E-65); tRNA-specific adenosine deaminase complement(3413275..3413838) Yersinia pseudotuberculosis IP 32953 2954504 YP_071389.1 CDS yfhB NC_006155.1 3413948 3414595 R similar to Yersinia pestis YPO2924 yfhB; membrane protein (99.5% evalue=1.E-122); Salmonella typhimurium STM2569 yfhB; putatative phosphoserine phosphatase (69.4% evalue=9.E-80); hypothetical protein complement(3413948..3414595) Yersinia pseudotuberculosis IP 32953 2957030 YP_071390.1 CDS murQ NC_006155.1 3414870 3415757 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(3414870..3415757) Yersinia pseudotuberculosis IP 32953 2954505 YP_071391.1 CDS YPTB2884 NC_006155.1 3415965 3416804 D similar to Yersinia pestis YPO2926 RpiR-family transcriptional regulatory protein (100% evalue=1.E-148); Salmonella typhimurium STM2572 yfhH; ABC superfamily (membrane) transport protein (62.4% evalue=2.E-93); DNA-binding transcriptional regulator 3415965..3416804 Yersinia pseudotuberculosis IP 32953 2954506 YP_071392.1 CDS fdx NC_006155.1 3416966 3417226 D similar to Yersinia pestis YPO2927 fdx; [4Fe-4S] ferredoxin (100% evalue=3.E-49); Salmonella typhi STY2822 ferredoxin (80.2% evalue=4.E-38); [4Fe-4S] ferredoxin 3416966..3417226 Yersinia pseudotuberculosis IP 32953 2955541 YP_071393.1 CDS acpS NC_006155.1 3417332 3417712 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(3417332..3417712) Yersinia pseudotuberculosis IP 32953 2955169 YP_071394.1 CDS pdxJ NC_006155.1 3417712 3418443 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(3417712..3418443) Yersinia pseudotuberculosis IP 32953 2956225 YP_071395.1 CDS recO NC_006155.1 3418602 3419327 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(3418602..3419327) Yersinia pseudotuberculosis IP 32953 2956420 YP_071396.1 CDS era NC_006155.1 3419337 3420248 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3419337..3420248) Yersinia pseudotuberculosis IP 32953 2955510 YP_071397.1 CDS rnc NC_006155.1 3420245 3420925 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(3420245..3420925) Yersinia pseudotuberculosis IP 32953 2956467 YP_071398.1 CDS lepB NC_006155.1 3421277 3422275 R catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I complement(3421277..3422275) Yersinia pseudotuberculosis IP 32953 2955938 YP_071399.1 CDS lepA NC_006155.1 3422285 3424084 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3422285..3424084) Yersinia pseudotuberculosis IP 32953 2955937 YP_071400.1 CDS YPTB2893 NC_006155.1 3424584 3425351 D similar to Yersinia pestis YPO2715 membrane protein (94.4% evalue=1.E-133); hypothetical protein 3424584..3425351 Yersinia pseudotuberculosis IP 32953 2954507 YP_071401.1 CDS rseC NC_006155.1 3425458 3425913 R involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC complement(3425458..3425913) Yersinia pseudotuberculosis IP 32953 2956555 YP_071402.1 CDS rseB NC_006155.1 3425910 3426866 R periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE complement(3425910..3426866) Yersinia pseudotuberculosis IP 32953 2956554 YP_071403.1 CDS rseA NC_006155.1 3426866 3427522 R similar to Yersinia pestis YPO2712 rseA, mclA; sigma E factor negative regulatory protein (100% evalue=1.E-122); Escherichia coli JW2556 rseA; Sigma-E (sigma-24) factor negative regulatory protein (63.3% evalue=2.E-75); anti-RNA polymerase sigma factor SigE complement(3426866..3427522) Yersinia pseudotuberculosis IP 32953 2956553 YP_071404.1 CDS rpoE NC_006155.1 3427548 3428123 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(3427548..3428123) Yersinia pseudotuberculosis IP 32953 2956524 YP_071405.1 CDS nadB NC_006155.1 3428311 3429948 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3428311..3429948 Yersinia pseudotuberculosis IP 32953 2956114 YP_071406.1 CDS YPTB2899 NC_006155.1 3430231 3430989 R similar to Yersinia pestis YPO2709 conserved hypothetical protein (99.6% evalue=1.E-146); Escherichia coli ECs3441 enzyme (53.1% evalue=3.E-67); hypothetical protein complement(3430231..3430989) Yersinia pseudotuberculosis IP 32953 2954508 YP_071407.1 CDS srmB NC_006155.1 3431229 3432554 D facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 3431229..3432554 Yersinia pseudotuberculosis IP 32953 2956633 YP_071408.1 CDS yplB NC_006155.1 3432685 3433341 R similar to Yersinia pestis YPO2707 yplB; phospholipase A accessory protein (100% evalue=1.E-122); C. elegans B0350.2B unc-44; (CE06703) (31.3% evalue=3.E-07); phospholipase A accessory protein complement(3432685..3433341) Yersinia pseudotuberculosis IP 32953 2957107 YP_071409.1 CDS yplA NC_006155.1 3433419 3434381 R similar to Yersinia pestis YPO2706 yplA, plaA; phospholipase A (100% evalue=1.E-179); phospholipase A complement(3433419..3434381) Yersinia pseudotuberculosis IP 32953 2957106 YP_071410.1 CDS YPTB2903 NC_006155.1 3434560 3434943 R stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA complement(3434560..3434943) Yersinia pseudotuberculosis IP 32953 2954509 YP_071411.1 CDS ung NC_006155.1 3435296 3435982 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3435296..3435982 Yersinia pseudotuberculosis IP 32953 2956867 YP_071412.1 CDS pcp NC_006155.1 3436073 3436720 R catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase complement(3436073..3436720) Yersinia pseudotuberculosis IP 32953 2956219 YP_071413.1 CDS YPTB2906 NC_006155.1 3436730 3437749 R similar to Yersinia pestis YPO2702 membrane protein (99.7% evalue=0); Ralstonia solanacearum RS01432 probable transmembrane protein (56% evalue=1.E-101); hypothetical protein complement(3436730..3437749) Yersinia pseudotuberculosis IP 32953 2954510 YP_071414.1 CDS YPTB2907 NC_006155.1 3437746 3438477 R similar to Yersinia pestis YPO2701 membrane protein (99.5% evalue=1.E-132); Ralstonia solanacearum RS01431 probable transmembrane protein (69.1% evalue=8.E-88); hypothetical protein complement(3437746..3438477) Yersinia pseudotuberculosis IP 32953 2954511 YP_071415.1 CDS YPTB2908 NC_006155.1 3438562 3439338 R similar to Yersinia pestis YPO2700 conserved hypothetical protein (99.5% evalue=1.E-136); Escherichia coli JW0703 ybgL; Hypothetical protein (71.3% evalue=3.E-93); LamB/YcsF family protein complement(3438562..3439338) Yersinia pseudotuberculosis IP 32953 2954512 YP_071416.1 CDS YPTB2909 NC_006155.1 3439296 3440246 R similar to Yersinia pestis YPO2699 conserved hypothetical protein (100% evalue=0); Escherichia coli JW0702 ybgK; Hypothetical protein (68.9% evalue=1.E-124); hypothetical protein complement(3439296..3440246) Yersinia pseudotuberculosis IP 32953 2954513 YP_071417.1 CDS YPTB2910 NC_006155.1 3440240 3440896 R similar to Escherichia coli ECs0736 carboxylase (71.5% evalue=1.E-89); Escherichia coli JW0701 ybgJ, ybgK; Hypothetical protein (72% evalue=6.E-90); carboxylase complement(3440240..3440896) Yersinia pseudotuberculosis IP 32953 2954514 YP_071418.1 CDS YPTB2911 NC_006155.1 3441515 3442261 R similar to Yersinia pestis YPO2697 conserved hypothetical protein (99.5% evalue=1.E-141); Escherichia coli ECs0735 hypothetical protein (69.2% evalue=6.E-97); hydrolase-oxidase complement(3441515..3442261) Yersinia pseudotuberculosis IP 32953 2954515 YP_071419.1 CDS YPTB2912 NC_006155.1 3442435 3443472 R similar to Yersinia pestis YPO2696 3',5'-cyclic-nucleotide phosphodiesterase (99.7% evalue=0); S. pombe CGS2 cgs2, spcc285.09c, pde1; 3',5'-cyclic-nucleotide phosphodiesterase (27.4% evalue=2.E-25); 3',5'-cyclic-nucleotide phosphodiesterase complement(3442435..3443472) Yersinia pseudotuberculosis IP 32953 2954516 YP_071420.1 CDS phrB NC_006155.1 3443463 3444926 R UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase complement(3443463..3444926) Yersinia pseudotuberculosis IP 32953 2956272 YP_071421.1 CDS YPTB2914 NC_006155.1 3445056 3445538 R similar to Yersinia pestis YPO2694 conserved hypothetical protein (100% evalue=7.E-90); Escherichia coli ECs0732 hypothetical protein (54.5% evalue=3.E-41); hypothetical protein complement(3445056..3445538) Yersinia pseudotuberculosis IP 32953 2954517 YP_071422.1 CDS ybfA NC_006155.1 3445952 3446158 R similar to Yersinia pestis YPO2693 ybfA; membrane protein (100% evalue=8.E-34); Salmonella typhimurium STM0708 ybfA; periplasmic protein (63.2% evalue=1.E-20); hypothetical protein complement(3445952..3446158) Yersinia pseudotuberculosis IP 32953 2956965 YP_071423.1 CDS kdpA NC_006155.1 3446653 3448341 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3446653..3448341 Yersinia pseudotuberculosis IP 32953 2955913 YP_071424.1 CDS kdpB NC_006155.1 3448435 3450501 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 3448435..3450501 Yersinia pseudotuberculosis IP 32953 2955914 YP_071425.1 CDS kdpC NC_006155.1 3450665 3451315 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 3450665..3451315 Yersinia pseudotuberculosis IP 32953 2955915 YP_071426.1 CDS kdpD NC_006155.1 3451325 3454051 D sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 3451325..3454051 Yersinia pseudotuberculosis IP 32953 2955916 YP_071427.1 CDS kdpE NC_006155.1 3454592 3455221 D response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 3454592..3455221 Yersinia pseudotuberculosis IP 32953 2955917 YP_071428.1 CDS YPTB2921 NC_006155.1 3455316 3455744 D similar to Yersinia pestis YPO2687 membrane protein (100% evalue=1.E-70); P. abyssi PAB0665 hypothetical protein (51.7% evalue=9.E-33); BAT family (DMT superfamily) transporter 3455316..3455744 Yersinia pseudotuberculosis IP 32953 2954518 YP_071429.1 CDS YPTB2922 NC_006155.1 3455872 3456114 R hypothetical protein complement(3455872..3456114) Yersinia pseudotuberculosis IP 32953 2954519 YP_071430.1 CDS pgm NC_006155.1 3456488 3458173 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(3456488..3458173) Yersinia pseudotuberculosis IP 32953 2956243 YP_071431.1 CDS seqA NC_006155.1 3458204 3458731 R negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA complement(3458204..3458731) Yersinia pseudotuberculosis IP 32953 2956593 YP_071432.1 CDS YPTB2925 NC_006155.1 3459226 3459594 D similar to Yersinia pestis YPO2684 exported protein (99.1% evalue=5.E-63); hypothetical protein 3459226..3459594 Yersinia pseudotuberculosis IP 32953 2954520 YP_071433.1 CDS YPTB2926 NC_006155.1 3459706 3459882 D similar to Yersinia pestis YPO2683 hypothetical protein, 100% identical.; hypothetical protein 3459706..3459882 Yersinia pseudotuberculosis IP 32953 2954521 YP_071434.1 CDS YPTB2927 NC_006155.1 3459889 3460650 R similar to Yersinia pestis YPO2682 conserved hypothetical protein (100% evalue=1.E-147); Escherichia coli Z2763 ydjC; orf, hypothetical protein (60.7% evalue=7.E-85); hypothetical protein complement(3459889..3460650) Yersinia pseudotuberculosis IP 32953 2954522 YP_071435.1 CDS celD NC_006155.1 3460702 3461532 R represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR complement(3460702..3461532) Yersinia pseudotuberculosis IP 32953 2955320 YP_071436.1 CDS celC NC_006155.1 3461581 3461928 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA complement(3461581..3461928) Yersinia pseudotuberculosis IP 32953 2955319 YP_071437.1 CDS celA NC_006155.1 3463468 3463785 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB complement(3463468..3463785) Yersinia pseudotuberculosis IP 32953 2955317 YP_071438.1 CDS ccrB NC_006155.1 3464825 3465205 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3464825..3465205 Yersinia pseudotuberculosis IP 32953 2954523 YP_071439.1 CDS ccrB NC_006155.1 3465221 3465625 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3465221..3465625 Yersinia pseudotuberculosis IP 32953 2954524 YP_071440.1 CDS kch NC_006155.1 3465723 3466898 R similar to Yersinia pestis YPO2675 potassium channel protein (98.9% evalue=0); Escherichia coli ECs1750 potassium channel protein (37.8% evalue=2.E-65); voltage-gated potassium channel complement(3465723..3466898) Yersinia pseudotuberculosis IP 32953 2955931 YP_071441.1 CDS hdeB NC_006155.1 3467517 3467846 D similar to Yersinia pestis YPO2674 exported protein (100% evalue=1.E-58); Salmonella typhimurium STM1562 periplasmic transport protein (44.4% evalue=2.E-21); acid-resistance protein 3467517..3467846 Yersinia pseudotuberculosis IP 32953 2954525 YP_071442.1 CDS YPTB2936 NC_006155.1 3468011 3469069 R similar to Yersinia pestis YPO2673 nickel transport protein (99.4% evalue=0); Salmonella typhimurium STM2783 nxiA; nickel transporter (60.1% evalue=1.E-119); nickel transport (NiCoT family) protein complement(3468011..3469069) Yersinia pseudotuberculosis IP 32953 2954526 YP_071443.1 CDS YPTB2937 NC_006155.1 3469218 3470210 R similar to Yersinia pestis YPO2672 urea transporter (99% evalue=0); Brucella melitensis BMEI0642 ureA transporter (45.7% evalue=9.E-76); urea transporter complement(3469218..3470210) Yersinia pseudotuberculosis IP 32953 2954527 YP_071444.1 CDS ureD NC_006155.1 3470589 3471554 R similar to Brucella melitensis BMEI0643 urease accessory protein UreD (51.8% evalue=5.E-89); B. halodurans BH0258 ureD; urease accessory protein (29.6% evalue=3.E-14); urease accessory protein complement(3470589..3471554) Yersinia pseudotuberculosis IP 32953 2956873 YP_071445.1 CDS ureG NC_006155.1 3471551 3472213 R similar to Yersinia pestis YPO2670 ureG; urease accessory protein (99.5% evalue=1.E-120); Brucella melitensis BMEI0644 urease accessory protein UreG (71.2% evalue=2.E-84); urease accessory protein complement(3471551..3472213) Yersinia pseudotuberculosis IP 32953 2956876 YP_071446.1 CDS ureF NC_006155.1 3472340 3473026 R similar to Yersinia pestis YPO2669 ureF; urease accessory protein (99.5% evalue=1.E-126); Brucella melitensis BMEI0645 urease accessory protein UreF (51.3% evalue=8.E-56); urease accessory protein complement(3472340..3473026) Yersinia pseudotuberculosis IP 32953 2956875 YP_071447.1 CDS ureE NC_006155.1 3473048 3473743 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(3473048..3473743) Yersinia pseudotuberculosis IP 32953 2956874 YP_071448.1 CDS ureC NC_006155.1 3474039 3475757 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3474039..3475757) Yersinia pseudotuberculosis IP 32953 2956872 YP_071449.1 CDS ureB NC_006155.1 3475847 3476281 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); urease subunit beta complement(3475847..3476281) Yersinia pseudotuberculosis IP 32953 2956871 YP_071450.1 CDS ureA NC_006155.1 3476334 3476636 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(3476334..3476636) Yersinia pseudotuberculosis IP 32953 2956870 YP_071451.1 CDS YPTB2945 NC_006155.1 3477835 3478500 R similar to Yersinia pestis YPO2664 transport ATPase (100% evalue=1.E-126); Salmonella typhimurium STM1259 ATPase component of ABC-type transport system, contain duplicated ATPase domain (61.7% evalue=8.E-66); nickel/di-oligopepetide ABC transporter ATP-binding protein complement(3477835..3478500) Yersinia pseudotuberculosis IP 32953 2954528 YP_071452.1 CDS YPTB2946 NC_006155.1 3478493 3479299 R similar to Yersinia pestis YPO2663 transport ATPase (99.6% evalue=1.E-153); Salmonella typhimurium STM1258 ATPase component of ABC-type transport system, contain duplicated ATPase domain (51.3% evalue=1.E-67); nickel/di-oligopepetide ABC transporter ATP-binding protein complement(3478493..3479299) Yersinia pseudotuberculosis IP 32953 2954529 YP_071453.1 CDS YPTB2947 NC_006155.1 3479299 3480105 R similar to Yersinia pestis YPO2662 binding-protein-dependent transport protein (100% evalue=1.E-153); Salmonella typhi STY1863 inner membrane transport protein (61.6% evalue=1.E-97); nickel/di-oligopepetide ABC transporter permease complement(3479299..3480105) Yersinia pseudotuberculosis IP 32953 2954530 YP_071454.1 CDS YPTB2948 NC_006155.1 3480102 3481085 R similar to Yersinia pestis YPO2661 membrane protein (99.6% evalue=0); Salmonella typhi STY1864 inner membrane transport protein (69.8% evalue=1.E-128); nickel/di-oligopepetide ABC transporter permease complement(3480102..3481085) Yersinia pseudotuberculosis IP 32953 2954531 YP_071455.1 CDS YPTB2949 NC_006155.1 3481070 3482647 R similar to Yersinia pestis YPO2660 solute-binding protein (99.6% evalue=0); Salmonella typhimurium STM1255 ABC transporter periplasmic binding protein (72.3% evalue=0); nickel/di-oligopepetide ABC transporter substrate-binding protein complement(3481070..3482647) Yersinia pseudotuberculosis IP 32953 2954532 YP_071456.1 CDS cspB NC_006155.1 3483443 3483655 R similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (91.4% evalue=3.E-32); cold shock protein complement(3483443..3483655) Yersinia pseudotuberculosis IP 32953 2955369 YP_071457.1 CDS YPTB2951 NC_006155.1 3484163 3484501 D hypothetical protein 3484163..3484501 Yersinia pseudotuberculosis IP 32953 2954533 YP_071458.1 CDS yicN NC_006155.1 3484666 3485115 D similar to Yersinia pestis YPO2654 yicN; membrane protein (100% evalue=8.E-81); Salmonella typhi STY3996 yicN; exported protein (35.1% evalue=9.E-21); hypothetical protein 3484666..3485115 Yersinia pseudotuberculosis IP 32953 2957074 YP_071459.1 CDS YPTB2953 NC_006155.1 3485213 3485548 R similar to Yersinia pestis YPO2653 conserved hypothetical protein (100% evalue=1.E-59); Salmonella typhi STY2924 ygaC; conserved hypothetical protein (59% evalue=2.E-30); hypothetical protein complement(3485213..3485548) Yersinia pseudotuberculosis IP 32953 2954534 YP_071460.1 CDS asr NC_006155.1 3486027 3486392 R required for growth and survival under moderately acid conditions; acid shock protein complement(3486027..3486392) Yersinia pseudotuberculosis IP 32953 2955250 YP_071461.1 CDS nrdH NC_006155.1 3486897 3487133 D similar to Yersinia pestis YPO2651 nrdH; glutaredoxin (100% evalue=3.E-40); Agrobacterium tumefaciens AGR_C_102 nrdH; glutaredoxin (61.1% evalue=1.E-23); glutaredoxin 3486897..3487133 Yersinia pseudotuberculosis IP 32953 2956160 YP_071462.1 CDS nrdI NC_006155.1 3487147 3487551 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 3487147..3487551 Yersinia pseudotuberculosis IP 32953 2956161 YP_071463.1 CDS nrdE NC_006155.1 3487533 3489683 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3487533..3489683 Yersinia pseudotuberculosis IP 32953 2956157 YP_071464.1 CDS nrdF NC_006155.1 3489790 3490761 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 3489790..3490761 Yersinia pseudotuberculosis IP 32953 2956158 YP_071465.1 CDS proV NC_006155.1 3491437 3492636 D similar to Yersinia pestis YPO2647 proV; glycine betaine/L-proline transport ATP-binding protein (100% evalue=0); Escherichia coli JW2652 proV; Glycine betaine/l-proline transport ATP-binding protein ProV (81.6% evalue=0); glycine/betaine/L-proline ABC transporter ATP-binding protein proV 3491437..3492636 Yersinia pseudotuberculosis IP 32953 2956327 YP_071466.1 CDS proW NC_006155.1 3492629 3493795 D with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 3492629..3493795 Yersinia pseudotuberculosis IP 32953 2956328 YP_071467.1 CDS proX NC_006155.1 3493843 3494847 D with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 3493843..3494847 Yersinia pseudotuberculosis IP 32953 2956329 YP_071468.1 CDS YPTB2962 NC_006155.1 3495077 3496027 R similar to Ralstonia solanacearum RS01484 conserved hypothetical protein (66.5% evalue=1.E-130); Pseudomonas aeruginosa PA1517 conserved hypothetical protein (58.9% evalue=1.E-110); hypothetical protein complement(3495077..3496027) Yersinia pseudotuberculosis IP 32953 2954535 YP_071469.1 CDS YPTB2963 NC_006155.1 3496321 3497832 D similar to Yersinia pestis YPO1083 permease (99.7% evalue=0); Pseudomonas aeruginosa PA0476 probable permease (38.5% evalue=1.E-100); nucleobase:cation symporter 3496321..3497832 Yersinia pseudotuberculosis IP 32953 2954536 YP_071470.1 CDS dnaQ NC_006155.1 3498078 3498842 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(3498078..3498842) Yersinia pseudotuberculosis IP 32953 2955477 YP_071471.1 CDS rnhA NC_006155.1 3498912 3499376 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 3498912..3499376 Yersinia pseudotuberculosis IP 32953 2956470 YP_071472.1 CDS YPTB2966 NC_006155.1 3499431 3500150 R similar to Yersinia pestis YPO1080 conserved hypothetical protein (100% evalue=1.E-141); Salmonella typhimurium STM0262 yafS; SAM-dependent methyltransferase (65.2% evalue=8.E-91); hypothetical protein complement(3499431..3500150) Yersinia pseudotuberculosis IP 32953 2954537 YP_071473.1 CDS gloB NC_006155.1 3500195 3500950 D similar to Yersinia pestis YPO1079 gloB; hydroxyacylglutathione hydrolase (99.6% evalue=1.E-145); Salmonella typhimurium STM0261 gloB; hydroxyacylglutathione hydrolase (58.9% evalue=8.E-86); hydroxyacylglutathione hydrolase 3500195..3500950 Yersinia pseudotuberculosis IP 32953 2955705 YP_071474.1 CDS mltD NC_006155.1 3500983 3502410 D catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 3500983..3502410 Yersinia pseudotuberculosis IP 32953 2956052 YP_071475.1 CDS YPTB2969 NC_006155.1 3502453 3503214 R similar to Yersinia pestis YPO1077 conserved hypothetical protein (100% evalue=1.E-144); Escherichia coli ECs0205 hypothetical protein (75.1% evalue=1.E-107); hypothetical protein complement(3502453..3503214) Yersinia pseudotuberculosis IP 32953 2954538 YP_071476.1 CDS YPTB2970 NC_006155.1 3503596 3504060 R similar to Yersinia pestis YPO1076 hypothetical protein, 100% identical; hypothetical protein complement(3503596..3504060) Yersinia pseudotuberculosis IP 32953 2954539 YP_071477.1 CDS dkgB NC_006155.1 3504095 3504898 R catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B complement(3504095..3504898) Yersinia pseudotuberculosis IP 32953 2954540 YP_071478.1 CDS YPTB2972 NC_006155.1 3511130 3511696 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(3511130..3511696) Yersinia pseudotuberculosis IP 32953 2954541 YP_071479.1 CDS metN NC_006155.1 3511883 3512914 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3511883..3512914 Yersinia pseudotuberculosis IP 32953 2954542 YP_071480.1 CDS YPTB2974 NC_006155.1 3512907 3513560 D part of the MetNIQ methionine uptake system; DL-methionine transporter permease 3512907..3513560 Yersinia pseudotuberculosis IP 32953 2954543 YP_071481.1 CDS metQ NC_006155.1 3513624 3514439 D similar to Yersinia pestis YPO1071 lipoprotein (99.2% evalue=1.E-149); Escherichia coli b0197 yaeC; unknown ABC transport system substrate-binding protein (90.4% evalue=1.E-138); DL-methionine transporter substrate-binding subunit 3513624..3514439 Yersinia pseudotuberculosis IP 32953 2954544 YP_071482.1 CDS rcsF NC_006155.1 3514557 3514964 D similar to Yersinia pestis YPO1070 rcsF; lipoprotein (100% evalue=1.E-73); Salmonella typhimurium STM0244 rcsF; regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis (67.4% evalue=9.E-46); outer membrane lipoprotein 3514557..3514964 Yersinia pseudotuberculosis IP 32953 2956409 YP_071483.1 CDS YPTB2977 NC_006155.1 3514961 3515668 D similar to Yersinia pestis YPO1069 conserved hypothetical protein (100% evalue=1.E-135); Salmonella typhimurium STM0243 yaeB; paral regulator (70.2% evalue=7.E-94); hypothetical protein 3514961..3515668 Yersinia pseudotuberculosis IP 32953 2954545 YP_071484.1 CDS proS NC_006155.1 3515772 3517490 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3515772..3517490 Yersinia pseudotuberculosis IP 32953 2956326 YP_071485.1 CDS cutF NC_006155.1 3517624 3518307 R similar to Yersinia pestis YPO1067 cutF, nlpE; copper homeostasis lipoprotein (100% evalue=1.E-130); Escherichia coli ECs0194 copper homeostasis protein (49.1% evalue=2.E-59); copper homeostasis and adhesion lipoprotein complement(3517624..3518307) Yersinia pseudotuberculosis IP 32953 2955381 YP_071486.1 CDS YPTB2980 NC_006155.1 3518392 3518832 R similar to Yersinia pestis YPO1066 conserved hypothetical protein (99.2% evalue=2.E-69); Escherichia coli b0191 yaeJ; hypothetical 15.6 kD protein in mesJ-cutF intergenic region (ORF140) (65.1% evalue=3.E-47); peptidyl-tRNA hydrolase domain-containing protein complement(3518392..3518832) Yersinia pseudotuberculosis IP 32953 2954546 YP_071487.1 CDS YPTB2981 NC_006155.1 3518811 3519425 R similar to Yersinia pestis YPO1065 conserved hypothetical protein (100% evalue=1.E-103); Escherichia coli b0190 yaeQ; hypothetical 20.9 kD protein in mesJ-cutF intergenic region (61.7% evalue=3.E-64); hypothetical protein complement(3518811..3519425) Yersinia pseudotuberculosis IP 32953 2954547 YP_071488.1 CDS YPTB2982 NC_006155.1 3519601 3519801 D similar to Yersinia pestis YPO1064a conserved hypothetical protein (98.4% evalue=6.E-31); Salmonella typhimurium STM0238 yaeP; cytoplasmic protein (78.7% evalue=8.E-23); hypothetical protein 3519601..3519801 Yersinia pseudotuberculosis IP 32953 2954548 YP_071489.1 CDS YPTB2983 NC_006155.1 3519788 3520048 D Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 3519788..3520048 Yersinia pseudotuberculosis IP 32953 2954549 YP_071490.1 CDS YPTB2984 NC_006155.1 3520302 3520619 R similar to Yersinia pestis YPO1063 cytochrome (100% evalue=1.E-54); Vibrio cholerae VC2241 cytochrome c554 (50.4% evalue=7.E-21); cytochrome complement(3520302..3520619) Yersinia pseudotuberculosis IP 32953 2954550 YP_071491.1 CDS tilS NC_006155.1 3520856 3522238 R Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase complement(3520856..3522238) Yersinia pseudotuberculosis IP 32953 2954551 YP_071492.1 CDS YPTB2986 NC_006155.1 3522240 3522638 R similar to Yersinia pestis YPO1061 conserved hypothetical protein (99.2% evalue=5.E-73); Escherichia coli ECs0189 hypothetical protein (71.8% evalue=4.E-51); hypothetical protein complement(3522240..3522638) Yersinia pseudotuberculosis IP 32953 2954552 YP_071493.1 CDS accA NC_006155.1 3522822 3523781 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(3522822..3523781) Yersinia pseudotuberculosis IP 32953 2955155 YP_071494.1 CDS dnaE NC_006155.1 3523794 3527309 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(3523794..3527309) Yersinia pseudotuberculosis IP 32953 2955472 YP_071495.1 CDS rnhB NC_006155.1 3527439 3528035 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(3527439..3528035) Yersinia pseudotuberculosis IP 32953 2956471 YP_071496.1 CDS lpxB NC_006155.1 3528032 3529216 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(3528032..3529216) Yersinia pseudotuberculosis IP 32953 2955967 YP_071497.1 CDS lpxA NC_006155.1 3529220 3530008 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(3529220..3530008) Yersinia pseudotuberculosis IP 32953 2955966 YP_071498.1 CDS fabZ NC_006155.1 3530012 3530542 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3530012..3530542) Yersinia pseudotuberculosis IP 32953 2955520 YP_071499.1 CDS lpxD NC_006155.1 3530700 3531722 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(3530700..3531722) Yersinia pseudotuberculosis IP 32953 2955969 YP_071500.1 CDS ompH NC_006155.1 3531726 3532274 R similar to Yersinia pestis YPO1053 ompH; cationic 19 kDa outer membrane protein precursor (99.3% evalue=9.E-85); Escherichia coli JW0173 hlpA; Histone-like protein hlp-1 precursor (DNA-binding 17 kd protein) (67.6% evalue=1.E-49); periplasmic chaperone complement(3531726..3532274) Yersinia pseudotuberculosis IP 32953 2956190 YP_071501.1 CDS YPTB2995 NC_006155.1 3532381 3534768 R part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT complement(3532381..3534768) Yersinia pseudotuberculosis IP 32953 2954553 YP_071502.1 CDS YPTB2996 NC_006155.1 3534805 3536160 R catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP complement(3534805..3536160) Yersinia pseudotuberculosis IP 32953 2954554 YP_071503.1 CDS cdsA NC_006155.1 3536189 3537037 R catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase complement(3536189..3537037) Yersinia pseudotuberculosis IP 32953 2955316 YP_071504.1 CDS uppS NC_006155.1 3537047 3537805 R catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase complement(3537047..3537805) Yersinia pseudotuberculosis IP 32953 2956869 YP_071505.1 CDS dxr NC_006155.1 3538029 3539225 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3538029..3539225) Yersinia pseudotuberculosis IP 32953 2955491 YP_071506.1 CDS frr NC_006155.1 3539439 3539996 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(3539439..3539996) Yersinia pseudotuberculosis IP 32953 2955642 YP_071507.1 CDS pyrH NC_006155.1 3540132 3540857 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(3540132..3540857) Yersinia pseudotuberculosis IP 32953 2956390 YP_071508.1 CDS tsf NC_006155.1 3541066 3541923 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(3541066..3541923) Yersinia pseudotuberculosis IP 32953 2956839 YP_071509.1 CDS rpsB NC_006155.1 3542052 3542777 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(3542052..3542777) Yersinia pseudotuberculosis IP 32953 2956531 YP_071510.1 CDS ampM NC_006155.1 3543212 3544003 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3543212..3544003 Yersinia pseudotuberculosis IP 32953 2955193 YP_071511.1 CDS glnD NC_006155.1 3544063 3546744 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3544063..3546744 Yersinia pseudotuberculosis IP 32953 2955697 YP_071512.1 CDS dapD NC_006155.1 3546919 3547743 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3546919..3547743 Yersinia pseudotuberculosis IP 32953 2955428 YP_071513.1 CDS YPTB3007 NC_006155.1 3547867 3548256 D similar to Yersinia pestis YPO1040 conserved hypothetical protein (100% evalue=2.E-69); Escherichia coli Z0175 yaeH; structural protein (85.7% evalue=3.E-59); hypothetical protein 3547867..3548256 Yersinia pseudotuberculosis IP 32953 2954555 YP_071514.1 CDS YPTB3008 NC_006155.1 3548346 3548795 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(3548346..3548795) Yersinia pseudotuberculosis IP 32953 2954556 YP_071515.1 CDS YPTB3009 NC_006155.1 3548823 3549596 R catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C complement(3548823..3549596) Yersinia pseudotuberculosis IP 32953 2954557 YP_071516.1 CDS YPTB3010 NC_006155.1 3549596 3549928 R similar to Yersinia pestis YPO1037 conserved hypothetical protein (100% evalue=7.E-60); H. influenzae HI1436 hypothetical prltein HI1436 (50.9% evalue=2.E-24); hypothetical protein complement(3549596..3549928) Yersinia pseudotuberculosis IP 32953 2954558 YP_071517.1 CDS syd NC_006155.1 3550620 3551171 R SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd complement(3550620..3551171) Yersinia pseudotuberculosis IP 32953 2956655 YP_071518.1 CDS queF NC_006155.1 3551303 3552148 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3551303..3552148 Yersinia pseudotuberculosis IP 32953 2954559 YP_071519.1 CDS YPTB3013 NC_006155.1 3552301 3553665 D similar to Yersinia pestis YPO1033 conserved hypothetical protein (99.5% evalue=0); Salmonella typhimurium STM2969 ygdH; nucleotide binding (83.9% evalue=0); hypothetical protein 3552301..3553665 Yersinia pseudotuberculosis IP 32953 2954560 YP_071520.1 CDS xni NC_006155.1 3553925 3554680 D has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 3553925..3554680 Yersinia pseudotuberculosis IP 32953 2956908 YP_071521.1 CDS YPTB3015 NC_006155.1 3554745 3555851 R similar to Yersinia pestis YPO1031 conserved hypothetical protein (100% evalue=0); Escherichia coli b2806 ygdE; hypothetical 41.9 kD protein in fucR-gcvA intergenic region (ORF3) (78% evalue=1.E-170); RNA 2'-O-ribose methyltransferase complement(3554745..3555851) Yersinia pseudotuberculosis IP 32953 2954561 YP_071522.1 CDS YPTB3016 NC_006155.1 3555844 3556239 R similar to Yersinia pestis YPO1030 conserved hypothetical protein (100% evalue=2.E-71); Escherichia coli b2807 ygdD; hypothetical 14.3 kD protein in fucR-gcvA intergenic region (ORF2) (71.7% evalue=8.E-53); hypothetical protein complement(3555844..3556239) Yersinia pseudotuberculosis IP 32953 2954562 YP_071523.1 CDS gcvA NC_006155.1 3556405 3557322 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(3556405..3557322) Yersinia pseudotuberculosis IP 32953 2955679 YP_071524.1 CDS YPTB3018 NC_006155.1 3557929 3559248 D similar to Yersinia pestis YPO1028 aminotransferase class V (99.7% evalue=0); Escherichia coli b2810 cysteine sulfinate desulfinase (66.8% evalue=1.E-155); cysteine sulfinate desulfinase 3557929..3559248 Yersinia pseudotuberculosis IP 32953 2954563 YP_071525.1 CDS YPTB3019 NC_006155.1 3559383 3559826 D similar to Yersinia pestis YPO1027 conserved hypothetical protein (100% evalue=3.E-81); Escherichia coli b2811 ygdK; hypothetical 15.9 kD protein in gcvA-metZ intergenic region (O147) (58.9% evalue=7.E-40); hypothetical protein 3559383..3559826 Yersinia pseudotuberculosis IP 32953 2954564 YP_071526.1 CDS YPTB3020 NC_006155.1 3559862 3560689 R similar to Yersinia pestis YPO1026 conserved hypothetical protein (100% evalue=1.E-154); Escherichia coli b2812 ygdL; hypothetical 28.6 kD protein in gcvA-mltA intergenic region (80.5% evalue=1.E-124); hypothetical protein complement(3559862..3560689) Yersinia pseudotuberculosis IP 32953 2954565 YP_071527.1 CDS mltA NC_006155.1 3560832 3562004 R membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A complement(3560832..3562004) Yersinia pseudotuberculosis IP 32953 2954566 YP_071528.1 CDS YPTB3022 NC_006155.1 3562907 3564157 R similar to Yersinia pestis YPO1023 N-acetylmuramoyl-L-alanine amidase AmiC precursor (100% evalue=0); Salmonella typhi STY3129 N-acetylmuramoyl-L-alanine amidase (72.3% evalue=1.E-171); N-acetylmuramoyl-L-alanine amidase complement(3562907..3564157) Yersinia pseudotuberculosis IP 32953 2954567 YP_071529.1 CDS argA NC_006155.1 3564393 3565718 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 3564393..3565718 Yersinia pseudotuberculosis IP 32953 2955212 YP_071530.1 CDS recD NC_006155.1 3565860 3567818 R helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha complement(3565860..3567818) Yersinia pseudotuberculosis IP 32953 2956415 YP_071531.1 CDS recB NC_006155.1 3567815 3571477 R helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta complement(3567815..3571477) Yersinia pseudotuberculosis IP 32953 2956413 YP_071532.1 CDS ptrA NC_006155.1 3571474 3574362 R similar to Yersinia pestis YPO1019 ptrA, ptr; protease III precursor (100% evalue=0); Salmonella typhimurium STM2995 ptr; protease III (63.3% evalue=0); protease III complement(3571474..3574362) Yersinia pseudotuberculosis IP 32953 2956358 YP_071533.1 CDS recC NC_006155.1 3574444 3577815 R catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma complement(3574444..3577815) Yersinia pseudotuberculosis IP 32953 2956414 YP_071534.1 CDS YPTB3028 NC_006155.1 3577950 3578315 R similar to Yersinia pestis YPO1017 prepilin peptidase dependent protein (100% evalue=2.E-68); prepilin peptidase dependent protein complement(3577950..3578315) Yersinia pseudotuberculosis IP 32953 2954568 YP_071535.1 CDS YPTB3029 NC_006155.1 3578348 3578818 R similar to Yersinia pestis YPO1016 membrane protein (100% evalue=5.E-89); hypothetical protein complement(3578348..3578818) Yersinia pseudotuberculosis IP 32953 2954569 YP_071536.1 CDS YPTB3030 NC_006155.1 3578815 3579423 R similar to Yersinia pestis YPO1015 prepilin peptidase dependent protein (100% evalue=1.E-116); Salmonella typhi STY3137 ppdB; prepilin peptidase dependent protein B precursor (35.1% evalue=7.E-25); hypothetical protein complement(3578815..3579423) Yersinia pseudotuberculosis IP 32953 2954570 YP_071537.1 CDS YPTB3031 NC_006155.1 3579414 3579983 R similar to Yersinia pestis YPO1014a prepilin peptidase (partial) (100% evalue=6.E-26); Salmonella typhimurium STM3000 ppdA; prepilin peptidase dependent protein A, component in type IV pilin biogenesis (35% evalue=5.E-20); hypothetical protein complement(3579414..3579983) Yersinia pseudotuberculosis IP 32953 2954571 YP_071538.1 CDS YPTB3032 NC_006155.1 3580106 3580204 R hypothetical protein complement(3580106..3580204) Yersinia pseudotuberculosis IP 32953 2954572 YP_071539.1 CDS thyA NC_006155.1 3580235 3581029 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(3580235..3581029) Yersinia pseudotuberculosis IP 32953 2956705 YP_071540.1 CDS lgt NC_006155.1 3581036 3581908 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3581036..3581908) Yersinia pseudotuberculosis IP 32953 2955946 YP_071541.1 CDS ptsP NC_006155.1 3582159 3584405 R member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein complement(3582159..3584405) Yersinia pseudotuberculosis IP 32953 2956365 YP_071542.1 CDS YPTB3036 NC_006155.1 3584418 3584945 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(3584418..3584945) Yersinia pseudotuberculosis IP 32953 2954573 YP_071543.1 CDS mutH NC_006155.1 3585642 3586328 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3585642..3586328 Yersinia pseudotuberculosis IP 32953 2956106 YP_071544.1 CDS tas NC_006155.1 3586699 3587739 D complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo/keto reductase 3586699..3587739 Yersinia pseudotuberculosis IP 32953 2956661 YP_071545.1 CDS YPTB3039 NC_006155.1 3588116 3588541 R similar to Yersinia pestis YPO0791 hypothetical protein, 100% identical; hypothetical protein complement(3588116..3588541) Yersinia pseudotuberculosis IP 32953 2954574 YP_071546.1 CDS ygeD NC_006155.1 3588708 3589928 R similar to Yersinia pestis YPO0792 ygeD; membrane protein (100% evalue=0); Salmonella typhimurium STM3009 ygeD; efflux protein, resistance protein (76% evalue=1.E-173); lysophospholipid transporter LplT complement(3588708..3589928) Yersinia pseudotuberculosis IP 32953 2957049 YP_071547.1 CDS aas NC_006155.1 3589925 3592081 R Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase complement(3589925..3592081) Yersinia pseudotuberculosis IP 32953 2955152 YP_071548.1 CDS bisC NC_006155.1 3592530 3594791 R similar to Yersinia pestis YPO0794 bisC; biotin sulfoxide reductas2 (99.6% evalue=0); Mycobacterium tuberculosis Rv1442 bisC; biotin sulfoxide reductase (42.4% evalue=1.E-174); biotin sulfoxide reductase complement(3592530..3594791) Yersinia pseudotuberculosis IP 32953 2955294 YP_071549.1 CDS galR NC_006155.1 3595101 3596123 D controls transcription of galETKM; DNA-binding transcriptional regulator GalR 3595101..3596123 Yersinia pseudotuberculosis IP 32953 2955673 YP_071550.1 CDS lysA NC_006155.1 3596120 3597382 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(3596120..3597382) Yersinia pseudotuberculosis IP 32953 2955976 YP_071551.1 CDS lysR NC_006155.1 3597598 3598539 D activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 3597598..3598539 Yersinia pseudotuberculosis IP 32953 2955979 YP_071552.1 CDS YPTB3047 NC_006155.1 3598536 3599696 R similar to Yersinia pestis YPO0798 sugar transport protein (100% evalue=0); Pseudomonas aeruginosa PA4355 probable MFS transporter (70.2% evalue=1.E-148); MFS family sugar antiporter complement(3598536..3599696) Yersinia pseudotuberculosis IP 32953 2954576 YP_071553.1 CDS YPTB3048 NC_006155.1 3600081 3600989 R similar to Yersinia pestis YPO0799 LysR-family transcriptional regulatory protein (99.6% evalue=1.E-168); Pseudomonas aeruginosa PA0056 probable transcriptional regulator (58.2% evalue=5.E-95); LysR family transcriptional regulator complement(3600081..3600989) Yersinia pseudotuberculosis IP 32953 2954577 YP_071554.1 CDS YPTB3049 NC_006155.1 3601096 3601983 D similar to Yersinia pestis YPO0800 exported protein (100% evalue=1.E-165); Pseudomonas aeruginosa PA0057 hypothetical protein (57.9% evalue=2.E-96); hypothetical protein 3601096..3601983 Yersinia pseudotuberculosis IP 32953 2954578 YP_071555.1 CDS YPTB3050 NC_006155.1 3602096 3602731 D similar to Yersinia pestis YPO0801 conserved hypothetical protein (99.5% evalue=1.E-121); Ralstonia solanacearum RS03863 conserved hypothetical protein (59% evalue=5.E-67); hypothetical protein 3602096..3602731 Yersinia pseudotuberculosis IP 32953 2954579 YP_071556.1 CDS cheD NC_006155.1 3602717 3604360 R similar to Yersinia pestis YPO0802 cheD, tse; methyl-accepting chemotaxis protein (99.6% evalue=0); Escherichia coli b4355 tsr, cheD; methyl-accepting chemotaxis protein I (MCP-I) (serine chemoreceptor protein) (40.1% evalue=1.E-101); methyl-accepting chemotaxis protein complement(3602717..3604360) Yersinia pseudotuberculosis IP 32953 2955326 YP_071557.1 CDS YPTB3052 NC_006155.1 3604563 3605036 R similar to Yersinia pestis YPO0803 hypothetical protein (98.4% evalue=7.E-73); hypothetical protein complement(3604563..3605036) Yersinia pseudotuberculosis IP 32953 2954580 YP_071558.1 CDS YPTB3053 NC_006155.1 3605021 3605680 R similar to Yersinia pestis YPO0804 regulatory membrane protein (100% evalue=1.E-112); Vibrio cholerae VC0826 toxin co-regulated pilus biosynthesis protein P (36.3% evalue=1.E-08); regulatory membrane protein complement(3605021..3605680) Yersinia pseudotuberculosis IP 32953 2954581 YP_071559.1 CDS YPTB3054 NC_006155.1 3605964 3606329 D similar to Yersinia pestis YPO0805 lipoprotein; hypothetical protein 3605964..3606329 Yersinia pseudotuberculosis IP 32953 2954582 YP_071560.1 CDS YPTB3055 NC_006155.1 3606313 3607155 R deleted EC_number 3.4.99.-; similar to Yersinia pestis YPO0806 prepilin peptidase (99.6% evalue=1.E-160); Ralstonia solanacearum RS00278 pilD, RSc2827; probable type 4 prepilin peptidase bifunctionnal: leader peptidase and N-methyltransferase transmembrane protein (44% evalue=1.E-53); prepilin peptidase complement(3606313..3607155) Yersinia pseudotuberculosis IP 32953 2954583 YP_071561.1 CDS YPTB3056 NC_006155.1 3607181 3607642 R similar to Yersinia pestis YPO0807 membrane protein, 100% identical; hypothetical protein complement(3607181..3607642) Yersinia pseudotuberculosis IP 32953 2954584 YP_071562.1 CDS gspL NC_006155.1 3607639 3608829 R similar to Yersinia pestis YPO0808 general secretion pathway protein L (99.7% evalue=0); Vibrio cholerae VC2725 general secretion pathway protein L (19.5% evalue=4.E-09); general secretion pathway protein L complement(3607639..3608829) Yersinia pseudotuberculosis IP 32953 2955760 YP_071563.1 CDS gspK NC_006155.1 3608813 3609769 R similar to Yersinia pestis YPO0809 general secretion pathway protein K (93.3% evalue=1.E-170); general secretion pathway protein K complement(3608813..3609769) Yersinia pseudotuberculosis IP 32953 2955759 YP_071564.1 CDS gspJ NC_006155.1 3609778 3610374 R similar to Yersinia pestis YPO0810 general secretion pathway protein J (91.4% evalue=1.E-101); Vibrio cholerae VC2727 general secretion pathway protein J (27.7% evalue=6.E-16); general secretion pathway protein J complement(3609778..3610374) Yersinia pseudotuberculosis IP 32953 2955758 YP_071565.1 CDS gspI NC_006155.1 3610367 3610711 R similar to Yersinia pestis YPO0811 general secretion pathway protein I (92.1% evalue=5.E-56); Vibrio cholerae VC2728 general secretion pathway protein I (31.9% evalue=6.E-11); general secretion pathway protein I complement(3610367..3610711) Yersinia pseudotuberculosis IP 32953 2955757 YP_071566.1 CDS YPTB3061 NC_006155.1 3610749 3611291 R similar to Yersinia pestis YPO0812 general secretion pathway protein H (98.8% evalue=1.E-101); general secretion pathway protein H complement(3610749..3611291) Yersinia pseudotuberculosis IP 32953 2954585 YP_071567.1 CDS gspG NC_006155.1 3611296 3611733 R similar to Yersinia pestis YPO0813 general secretion pathway protein G (100% evalue=4.E-80); Escherichia coli b3328 hofG, hopG; general secretion pathway protein G precursor (protein transport protein hofG) (63.9% evalue=2.E-46); general secretion pathway protein G complement(3611296..3611733) Yersinia pseudotuberculosis IP 32953 2955756 YP_071568.1 CDS gspF NC_006155.1 3611753 3612955 R similar to Escherichia coli b3327 hofF, hopF; general secretion pathway protein F (protein transport protein hofF) (38.8% evalue=5.E-76); Escherichia coli JW3289 hofF (38.8% evalue=5.E-76); general secretion pathway protein F complement(3611753..3612955) Yersinia pseudotuberculosis IP 32953 2955755 YP_071569.1 CDS gspE NC_006155.1 3612942 3614453 R similar to Yersinia pestis YPO0815 general secretion pathway protein E (100% evalue=0); Vibrio cholerae VC2732 general secretion pathway protein E (56.7% evalue=1.E-142); general secretion pathway protein E complement(3612942..3614453) Yersinia pseudotuberculosis IP 32953 2955754 YP_071570.1 CDS gspD NC_006155.1 3614450 3616372 R similar to Yersinia pestis YPO0816 general secretion pathway protein D (99.6% evalue=0); Escherichia coli b3325 yheF; general secretion pathway protein D precursor (44.8% evalue=1.E-146); general secretion pathway protein D complement(3614450..3616372) Yersinia pseudotuberculosis IP 32953 2955753 YP_071571.1 CDS YPTB3066 NC_006155.1 3616453 3616986 R similar to Yersinia pestis YPO0817 general secretion pathway protein C (98.8% evalue=4.E-90); general secretion pathway protein C complement(3616453..3616986) Yersinia pseudotuberculosis IP 32953 2954586 YP_071572.1 CDS YPTB3067 NC_006155.1 3617024 3617440 R similar to Yersinia pestis YPO0818 hypothetical protein (100% evalue=4.E-77); hypothetical protein complement(3617024..3617440) Yersinia pseudotuberculosis IP 32953 2954587 YP_071573.1 CDS YPTB3068 NC_006155.1 3618183 3618938 R similar to Yersinia pestis YPO0819 carbonic anhydrase (100% evalue=1.E-138); Salmonella typhimurium PSLT046 carbonic anhydrase (61.3% evalue=7.E-82); carbonic anhydrase complement(3618183..3618938) Yersinia pseudotuberculosis IP 32953 2954588 YP_071574.1 CDS YPTB3069 NC_006155.1 3619262 3619621 D similar to Yersinia pestis YPO0820 hypothetical protein (95.6% evalue=5.E-48); hypothetical protein 3619262..3619621 Yersinia pseudotuberculosis IP 32953 2954589 YP_071575.1 CDS YPTB3070 NC_006155.1 3620008 3620202 D similar to Yersinia pestis YPO0821 hypothetical protein, 98% identical; hypothetical protein 3620008..3620202 Yersinia pseudotuberculosis IP 32953 2954590 YP_071576.1 CDS YPTB3071 NC_006155.1 3620224 3621174 D similar to Yersinia pestis YPO0822 exported protein (100% evalue=0); hypothetical protein 3620224..3621174 Yersinia pseudotuberculosis IP 32953 2954591 YP_071577.1 CDS YPTB3072 NC_006155.1 3621289 3623475 D similar to Yersinia pestis YPO0823 exported protein (100% evalue=0); Rickettsia conorii RC1085 rompB; outer membrane protein B (cell surface antigen sca5) (21.9% evalue=9.E-12); autotransporter domain-containing protein 3621289..3623475 Yersinia pseudotuberculosis IP 32953 2954592 YP_071578.1 CDS YPTB3073 NC_006155.1 3623545 3626658 D similar to Yersinia pestis YPO0824 exported protein (99.9% evalue=0); chondroitin ABC lyase 3623545..3626658 Yersinia pseudotuberculosis IP 32953 2954593 YP_071579.1 CDS YPTB3074 NC_006155.1 3627098 3628651 R similar to Yersinia pestis YPO0829 sulfatase (99.8% evalue=0); Salmonella typhimurium STM0035 arylsulfatase (24.3% evalue=2.E-26); sulfatase complement(3627098..3628651) Yersinia pseudotuberculosis IP 32953 2954594 YP_071580.1 CDS YPTB3075 NC_006155.1 3629491 3630267 D similar to Yersinia pestis YPO0831 DeoR-family regulatory protein (99.6% evalue=1.E-138); Escherichia coli JW3100 agaR; aga operon transcriptional repressor (46.6% evalue=8.E-58); DeoR family regulatory protein 3629491..3630267 Yersinia pseudotuberculosis IP 32953 2954595 YP_071581.1 CDS agaZ NC_006155.1 3630317 3631615 D similar to Yersinia pestis YPO0832 agaZ; tagatose 6-phosphate kinase (99.7% evalue=0); Escherichia coli b3132 agaZ; tagatose 6-phosphate kinase agaZ (63.5% evalue=1.E-153); tagatose 6-phosphate kinase 3630317..3631615 Yersinia pseudotuberculosis IP 32953 2955178 YP_071582.1 CDS YPTB3077 NC_006155.1 3631612 3632778 D similar to Yersinia pestis YPO0833 phosphosugar isomerase (99.7% evalue=0); Escherichia coli b3136 agaS; agaS protein (48.6% evalue=2.E-96); phosphosugar isomerase 3631612..3632778 Yersinia pseudotuberculosis IP 32953 2954596 YP_071583.1 CDS manX NC_006155.1 3632796 3633293 D similar to Yersinia pestis YPO0834 manX; PTS system, N-acetylgalactosamine-specific II component (100% evalue=8.E-92); Escherichia coli Z4485 agaV; PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (48.7% evalue=8.E-38); PTS system N-acetylgalactosamine-specific transporter subunit IIB 3632796..3633293 Yersinia pseudotuberculosis IP 32953 2955997 YP_071584.1 CDS YPTB3079 NC_006155.1 3633340 3634128 D similar to Yersinia pestis YPO0835 PTS permease (100% evalue=1.E-147); Escherichia coli ECs4012 N-acetylgalactosamine-specific PTS system enzyme IIC component (44.2% evalue=1.E-56); PTS system transporter subunit IIC 3633340..3634128 Yersinia pseudotuberculosis IP 32953 2954597 YP_071585.1 CDS YPTB3080 NC_006155.1 3634118 3635008 D similar to Yersinia pestis YPO0836 PTS permease (100% evalue=1.E-166); Escherichia coli ECs4013 N-acetylgalactosamine-specific PTS system enzyme IID component (43.9% evalue=2.E-55); PTS system transporter subunit IID 3634118..3635008 Yersinia pseudotuberculosis IP 32953 2954598 YP_071586.1 CDS YPTB3081 NC_006155.1 3635094 3635534 D similar to Yersinia pestis YPO0837 PTS system, N-acetylgalactosamine-specific II component, (99.3% evalue=2.E-74); Escherichia coli ECs4014 N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component (38.9% evalue=3.E-20); PTS system N-acetylgalactosamine-specific transporter subunit IIA 3635094..3635534 Yersinia pseudotuberculosis IP 32953 2954599 YP_071587.1 CDS YPTB3082 NC_006155.1 3635537 3636703 D similar to Yersinia pestis YPO0838 acetylglucosamine-6-phosphate deacetylase (100% evalue=0); Escherichia coli ECs4015 N-acetylgalactosamine-6-phosphate deacetylase (40.4% evalue=1.E-65); acetylglucosamine-6-phosphate deacetylase 3635537..3636703 Yersinia pseudotuberculosis IP 32953 2954600 YP_071588.1 CDS kduD2 NC_006155.1 3636899 3637654 D catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 3636899..3637654 Yersinia pseudotuberculosis IP 32953 2955923 YP_071589.1 CDS YPTB3084 NC_006155.1 3637670 3638728 D similar to Yersinia pestis YPO0840 conserved hypothetical protein (100% evalue=0); Agrobacterium tumefaciens Atu4561 conserved hypothetical protein (32.4% evalue=7.E-13); hypothetical protein 3637670..3638728 Yersinia pseudotuberculosis IP 32953 2954601 YP_071590.1 CDS YPTB3085 NC_006155.1 3639159 3640385 D similar to Yersinia pestis YPO0841 regulatory protein (99.7% evalue=0); Pasteurella multocida PM0600 arylsulfatase regulator (61.5% evalue=1.E-141); Chondro-6-sulfatase 3639159..3640385 Yersinia pseudotuberculosis IP 32953 2954602 YP_071591.1 CDS YPTB3086 NC_006155.1 3640406 3642013 D similar to Yersinia pestis YPO0842 sulfatase (99.8% evalue=0); Escherichia coli ECs2103 sulfatase (40.3% evalue=1.E-110); sulfatase 3640406..3642013 Yersinia pseudotuberculosis IP 32953 2954603 YP_071592.1 CDS YPTB3087 NC_006155.1 3642136 3643623 D similar to Yersinia pestis YPO0843 hypothetical protein (98.5% evalue=0); Sinorhizobium meliloti SMb20536 hypothetical protein (28.2% evalue=3.E-22); hypothetical protein 3642136..3643623 Yersinia pseudotuberculosis IP 32953 2954604 YP_071593.1 CDS gatY NC_006155.1 3643734 3644588 D catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase 3643734..3644588 Yersinia pseudotuberculosis IP 32953 2955177 YP_071594.1 CDS YPTB3089 NC_006155.1 3644612 3645190 D similar to Yersinia pestis YPO0845 ThiJ/PfpI-family thiamine biogenesis protein (99.4% evalue=1.E-106); Salmonella typhimurium STM1931 araH; intracellular protease/amidase (50.8% evalue=1.E-44); ThiJ/PfpI-family thiamine biogenesis protein 3644612..3645190 Yersinia pseudotuberculosis IP 32953 2954605 YP_071595.1 CDS YPTB3090 NC_006155.1 3645160 3645441 R hypothetical protein complement(3645160..3645441) Yersinia pseudotuberculosis IP 32953 2954606 YP_071596.1 CDS YPTB3091 NC_006155.1 3645431 3646513 R similar to Yersinia pestis YPO0846 LacI-family regulatory protein (100% evalue=0); Sinorhizobium meliloti SMb20537 transcriptional regulator protein (27.8% evalue=9.E-24); LacI-family regulatory protein complement(3645431..3646513) Yersinia pseudotuberculosis IP 32953 2954607 YP_071597.1 CDS YPTB3092 NC_006155.1 3646907 3648214 D similar to Yersinia pestis YPO0847 sugar transporter (99.7% evalue=0); Ralstonia solanacearum RS04107 exuT2, RSc1080; hexuronate transporter transmembrane protein (46.9% evalue=1.E-116); MFS superfamily hexuronate transporter 3646907..3648214 Yersinia pseudotuberculosis IP 32953 2954608 YP_071598.1 CDS YPTB3093 NC_006155.1 3648363 3650738 D similar to Yersinia pestis YPO0848 glucosidase (99.6% evalue=0); B. halodurans BH0704 glucosidase (52.5% evalue=0); glucosidase family protein 3648363..3650738 Yersinia pseudotuberculosis IP 32953 2954609 YP_071599.1 CDS lacI NC_006155.1 3650877 3651950 R transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor complement(3650877..3651950) Yersinia pseudotuberculosis IP 32953 2955929 YP_071600.1 CDS lamB NC_006155.1 3652222 3653481 D porin involved in the transport of maltose and maltodextrins; maltoporin 3652222..3653481 Yersinia pseudotuberculosis IP 32953 2955933 YP_071601.1 CDS bgaB NC_006155.1 3654309 3656369 R similar to Yersinia pestis YPO0852 bgaB, pbg; puative beta-galactosidase (100% evalue=0); C. perfringens CPE0167 pbg; beta-galactosidase (51.3% evalue=0); beta-galactosidase complement(3654309..3656369) Yersinia pseudotuberculosis IP 32953 2955282 YP_071602.1 CDS YPTB3098 NC_006155.1 3656420 3657622 R similar to Yersinia pestis YPO0853 galactosidase (100% evalue=0); Thermotoga maritima TM1201 arabinogalactan endo-1,4-beta-galactosidase, (49.2% evalue=1.E-104); galactosidase complement(3656420..3657622) Yersinia pseudotuberculosis IP 32953 2954611 YP_071603.1 CDS YPTB3099 NC_006155.1 3657627 3658478 R similar to Yersinia pestis YPO0854 maltodextrin permease (100% evalue=1.E-156); B. halodurans BH2021 maltose/maltodextrin transport system permease (69.6% evalue=1.E-110); maltodextrin ABC transporter permease complement(3657627..3658478) Yersinia pseudotuberculosis IP 32953 2954612 YP_071604.1 CDS YPTB3100 NC_006155.1 3658490 3659797 R similar to Yersinia pestis YPO0855 maltodextrin transport permease (99.7% evalue=0); Bacillus subtilis BG12437 yvfL; maltose/maltodextrin transport system permease (68.2% evalue=1.E-175); maltodextrin ABC transporter permease complement(3658490..3659797) Yersinia pseudotuberculosis IP 32953 2954613 YP_071605.1 CDS YPTB3101 NC_006155.1 3659957 3661192 R similar to Yersinia pestis YPO0856 sugar-binding protein (100% evalue=0); Bacillus subtilis BG12436 yvfK; maltose/maltodextrin transport system substrate-binding protein (49% evalue=1.E-106); sugar(maltose) ABC transporter substrate-binding protein complement(3659957..3661192) Yersinia pseudotuberculosis IP 32953 2954614 YP_071606.1 CDS YPTB3102 NC_006155.1 3661555 3662661 D similar to Yersinia pestis YPO0857 sugar transport ATP-binding protein (99.4% evalue=0); Ralstonia solanacearum RS01463 probable sugar ATP-binding ABC transporter protein (56.3% evalue=1.E-108); sugar ABC transporter ATP-binding protein 3661555..3662661 Yersinia pseudotuberculosis IP 32953 2954615 YP_071607.1 CDS YPTB3103 NC_006155.1 3663200 3664708 D similar to Yersinia pestis YPO0858 sugar transport ATP-binding protein (99.2% evalue=0); Brucella melitensis BMEI0391 sugar transport ATP-binding protein (52.4% evalue=1.E-133); sugar ABC transporter ATPase 3663200..3664708 Yersinia pseudotuberculosis IP 32953 2954616 YP_071608.1 CDS YPTB3104 NC_006155.1 3664758 3665786 D similar to Yersinia pestis YPO0859 sugar transport system permease (99.7% evalue=0); Brucella melitensis BMEI0392 ribose transport system permease RbsC (54.4% evalue=2.E-98); sugar ABC transporter permease 3664758..3665786 Yersinia pseudotuberculosis IP 32953 2954617 YP_071609.1 CDS YPTB3105 NC_006155.1 3666203 3667204 D similar to Yersinia pestis YPO0860 sugar-binding periplasmic protein (100% evalue=0); Brucella melitensis BMEI0393 D-ribose-binding periplasmic protein precursor (55.3% evalue=2.E-94); sugar ABC transporter substrate-binding protein 3666203..3667204 Yersinia pseudotuberculosis IP 32953 2954618 YP_071610.1 CDS YPTB3106 NC_006155.1 3667983 3668501 D similar to Yersinia pestis YPO0862 exported protein (100% evalue=8.E-95); hypothetical protein 3667983..3668501 Yersinia pseudotuberculosis IP 32953 2954619 YP_071611.1 CDS YPTB3107 NC_006155.1 3668877 3669734 D similar to Yersinia pestis YPO0863 lipoprotein (100% evalue=1.E-162); Escherichia coli b0193 yaeF; hypothetical 32.1 kD lipoprotein in cutF-proS intergenic region precursor (43.2% evalue=1.E-51); hypothetical protein 3668877..3669734 Yersinia pseudotuberculosis IP 32953 2954620 YP_071612.1 CDS YPTB3108 NC_006155.1 3670177 3670857 D similar to Yersinia pestis YPO0864 conserved hypothetical protein (99.5% evalue=1.E-128); Caulobacter crescentus CC3691 conserved hypothetical protein (46.3% evalue=1.E-27); hypothetical protein 3670177..3670857 Yersinia pseudotuberculosis IP 32953 2954621 YP_071613.1 CDS YPTB3109 NC_006155.1 3670857 3671177 D similar to Yersinia pestis YPO0865 hypothetical protein (99% evalue=2.E-55); hypothetical protein 3670857..3671177 Yersinia pseudotuberculosis IP 32953 2954622 YP_071614.1 CDS YPTB3110 NC_006155.1 3671276 3671581 R similar to Yersinia pestis YPO0866 conserved hypothetical protein (99% evalue=7.E-55); Ralstonia solanacearum RS00394 conserved hypothetical protein (46.9% evalue=3.E-12); hypothetical protein complement(3671276..3671581) Yersinia pseudotuberculosis IP 32953 2954623 YP_071615.1 CDS YPTB3111 NC_006155.1 3671798 3672577 R similar to Yersinia pestis YPO0867 membrane protein (100% evalue=1.E-143); hypothetical protein complement(3671798..3672577) Yersinia pseudotuberculosis IP 32953 2954624 YP_071616.1 CDS YPTB3112 NC_006155.1 3673182 3673898 R similar to Yersinia pestis YPO0869 hypothetical protein (100% evalue=1.E-138); hypothetical protein complement(3673182..3673898) Yersinia pseudotuberculosis IP 32953 2954625 YP_071617.1 CDS YPTB3113 NC_006155.1 3673919 3676231 R similar to Yersinia pestis YPO0870 conserved hypothetical protein (99.7% evalue=0); Pseudomonas aeruginosa PA5441 hypothetical protein (32.9% evalue=6.E-86); hypothetical protein complement(3673919..3676231) Yersinia pseudotuberculosis IP 32953 2954626 YP_071618.1 CDS YPTB3114 NC_006155.1 3676488 3676772 R similar to Yersinia pestis YPO0871 colicin immunity protein, 98% identical; hypothetical protein complement(3676488..3676772) Yersinia pseudotuberculosis IP 32953 2954627 YP_071619.1 CDS YPTB3115 NC_006155.1 3676819 3677076 R similar to Yersinia pestis YPO872 hypothetical protein, 100% identical.; hypothetical protein complement(3676819..3677076) Yersinia pseudotuberculosis IP 32953 2954628 YP_071620.1 CDS YPTB3116 NC_006155.1 3677589 3679121 R similar to Yersinia pestis YPO1484 hypothetical protein (76.9% evalue=9.E-39); hypothetical protein complement(3677589..3679121) Yersinia pseudotuberculosis IP 32953 2954629 YP_071621.1 CDS YPTB3117 NC_006155.1 3679626 3680768 R similar to Yersinia pestis YPO0874 hypothetical protein (100% evalue=0); Pasteurella multocida PM1770 hypothetical, C. elegans (66% evalue=1.E-141); hypothetical protein complement(3679626..3680768) Yersinia pseudotuberculosis IP 32953 2954630 YP_071622.1 CDS YPTB3118 NC_006155.1 3681037 3681402 D similar to Yersinia pestis YPO0875 hypothetical protein (99.1% evalue=1.E-67); hypothetical protein 3681037..3681402 Yersinia pseudotuberculosis IP 32953 2954631 YP_071623.1 CDS YPTB3119 NC_006155.1 3681415 3682071 D similar to Yersinia pestis YPO0877 hypothetical protein (72.6% evalue=2.E-37); hypothetical protein 3681415..3682071 Yersinia pseudotuberculosis IP 32953 2954632 YP_071624.1 CDS YPTB3120 NC_006155.1 3682253 3682453 D similar to Yersinia pestis YPO0878 regulatory protein (100% evalue=7.E-33); Escherichia coli Z3946 DNA binding protein (59.6% evalue=8.E-16); DNA binding protein 3682253..3682453 Yersinia pseudotuberculosis IP 32953 2954633 YP_071625.1 CDS YPTB3121 NC_006155.1 3682612 3682938 R phage protein complement(3682612..3682938) Yersinia pseudotuberculosis IP 32953 2954634 YP_071626.1 CDS YPTB3122 NC_006155.1 3683238 3685529 D similar to Yersinia pestis YPO0880 primase (99% evalue=0); Salmonella typhi STY4832 Bacteriophage P4 DNA primase (40.8% evalue=1.E-158); phage primase 3683238..3685529 Yersinia pseudotuberculosis IP 32953 2954635 YP_071627.1 CDS YPTB3123 NC_006155.1 3685929 3686327 R similar to Yersinia pestis YPO0881 conserved hypothetical protein (100% evalue=2.E-72); Escherichia coli JW2989 ygiT; Hypothetical protein (60.3% evalue=9.E-44); DNA binding (HTH) protein complement(3685929..3686327) Yersinia pseudotuberculosis IP 32953 2954636 YP_071628.1 CDS YPTB3124 NC_006155.1 3686327 3686644 R similar to Yersinia pestis YPO0882 conserved hypothetical protein (98.9% evalue=2.E-50); Escherichia coli JW2990 ygiU; Hypothetical protein (68% evalue=1.E-31); hypothetical protein complement(3686327..3686644) Yersinia pseudotuberculosis IP 32953 2954637 YP_071629.1 CDS YPTB3125 NC_006155.1 3686787 3687149 R similar to Yersinia pestis YPO4028 regulator (96.6% evalue=1.E-62); DNA binding protein complement(3686787..3687149) Yersinia pseudotuberculosis IP 32953 2954638 YP_071630.1 CDS YPTB3126 NC_006155.1 3687212 3687472 R similar to Yersinia pestis YPO0884 hypothetical protein (100% evalue=2.E-43); bacteriophage protein complement(3687212..3687472) Yersinia pseudotuberculosis IP 32953 2954639 YP_071631.1 CDS YPTB3129 NC_006155.1 3688397 3689380 R similar to Salmonella typhi STY4645 phage integrase (39.8% evalue=3.E-62); Salmonella typhimurium STM2739 Fels-2 prophage: similar to int protein in phage 186 (40.1% evalue=7.E-63); phage integrase/recombinase complement(3688397..3689380) Yersinia pseudotuberculosis IP 32953 2954642 YP_071632.1 CDS YPTB3130 NC_006155.1 3689447 3689794 R similar to gpC [Enterobacteria phage P2] gb|AAD03298.1| (AF063097) gpC [Enterobacteria phage P2], E()=7.00e-28, 59% identity.; phage repressor protein C complement(3689447..3689794) Yersinia pseudotuberculosis IP 32953 2954643 YP_071633.1 CDS YPTB3131 NC_006155.1 3689860 3690132 D similar to (AJ306907) Cox protein [Enterobacteria phage P2], evalue=3e-30 Id=68%; bacteriophage Cox protein 3689860..3690132 Yersinia pseudotuberculosis IP 32953 2954644 YP_071634.1 CDS YPTB3132 NC_006155.1 3690338 3690622 D hypothetical protein 3690338..3690622 Yersinia pseudotuberculosis IP 32953 2954645 YP_071635.1 CDS YPTB3133 NC_006155.1 3691181 3691450 D hypothetical protein 3691181..3691450 Yersinia pseudotuberculosis IP 32953 2954646 YP_071636.1 CDS YPTB3134 NC_006155.1 3691680 3692030 D similar to Salmonella typhi STY3664 conserved hypothetical protein (30.9% evalue=2.E-07); hypothetical protein 3691680..3692030 Yersinia pseudotuberculosis IP 32953 2954647 YP_071637.1 CDS YPTB3135 NC_006155.1 3692337 3693002 D similar to Caulobacter crescentus CC0765 conserved hypothetical protein (50% evalue=1.E-07); bacteriophage protein 3692337..3693002 Yersinia pseudotuberculosis IP 32953 2954648 YP_071638.1 CDS YPTB3136 NC_006155.1 3693012 3693713 D similar to Vibrio cholerae VC2233 DNA polymerase III, epsilon subunit (28.5% evalue=1.E-09); Salmonella typhi STY4637 exonuclease (45.3% evalue=3.E-38); bacteriophage protein 3693012..3693713 Yersinia pseudotuberculosis IP 32953 2954649 YP_071639.1 CDS YPTB3137 NC_006155.1 3694060 3696615 D similar to Salmonella typhi STY3668 possible endonuclease (43.8% evalue=0); Salmonella typhimurium STM2729 Fels-2 prophage: similar to retron in E coli (43.1% evalue=1.E-179); phage protein 3694060..3696615 Yersinia pseudotuberculosis IP 32953 2954650 YP_071640.1 CDS YPTB3138 NC_006155.1 3696877 3697203 R bacteriophage phi CTX; similar to orf34; similar to (AB008550) orf34 [bacteriophage phiCTX], E()=7.00e-05, 34% identity; hypothetical protein complement(3696877..3697203) Yersinia pseudotuberculosis IP 32953 2954651 YP_071641.1 CDS YPTB3139 NC_006155.1 3697200 3698267 R similar to Salmonella typhi STY4628 probable capsid portal protein (36.4% evalue=4.E-47); Salmonella typhimurium STM2723 Fels-2 prophage: similar to gpQ, portal vector protein, in phage P2 (36.9% evalue=2.E-47); hypothetical protein complement(3697200..3698267) Yersinia pseudotuberculosis IP 32953 2954652 YP_071642.1 CDS YPTB3140 NC_006155.1 3698264 3700069 R similar to Salmonella typhi STY4627 probable terminase subunit (41.5% evalue=1.E-120); Salmonella typhimurium STM2722 Fels-2 prophage: similar to gpP, ATP charging, in phage P2 (41.3% evalue=1.E-119); orf16-like phage protein complement(3698264..3700069) Yersinia pseudotuberculosis IP 32953 2954653 YP_071643.1 CDS YPTB3141 NC_006155.1 3700242 3701330 D similar to Salmonella typhi STY3676 capsid scaffolding protein (42.8% evalue=7.E-22); Salmonella typhimurium STM2721 Fels-2 prophage: similar to gpO, capsid scaffold, in phage P2 (27.9% evalue=6.E-23); hypothetical protein 3700242..3701330 Yersinia pseudotuberculosis IP 32953 2954654 YP_071644.1 CDS YPTB3142 NC_006155.1 3701365 3702393 D similar to Salmonella typhi STY4625 major capsid protein (30% evalue=2.E-32); Ralstonia solanacearum RS03506 probable bacteriophage protein (29% evalue=4.E-32); phage protein 3701365..3702393 Yersinia pseudotuberculosis IP 32953 2954655 YP_071645.1 CDS YPTB3143 NC_006155.1 3702396 3703100 D similar to Salmonella typhi STY4624 phage terminase (23.7% evalue=1.E-09); Salmonella typhimurium STM2719 Fels-2 prophage: similar to gpR in phage 186 (22.8% evalue=1.E-09); hypothetical protein 3702396..3703100 Yersinia pseudotuberculosis IP 32953 2954656 YP_071646.1 CDS YPTB3144 NC_006155.1 3703209 3703682 D similar to Salmonella typhi STY4623 capsid completion protein (23.6% evalue=4.E-07); Salmonella typhi STY3679 capsid completion protein (23.2% evalue=2.E-07); hypothetical protein 3703209..3703682 Yersinia pseudotuberculosis IP 32953 2954657 YP_071647.1 CDS YPTB3145 NC_006155.1 3703679 3704173 D similar to protein 21 (AY027935) [Haemophilus influenzae phage HP2]; hypothetical protein 3703679..3704173 Yersinia pseudotuberculosis IP 32953 2954658 YP_071648.1 CDS YPTB3146 NC_006155.1 3704170 3704829 D similar to protein 22 (U24159) [phage HP1]; hypothetical protein 3704170..3704829 Yersinia pseudotuberculosis IP 32953 2954659 YP_071649.1 CDS YPTB3147 NC_006155.1 3704853 3706019 D similar to protein 23 (AY027935) [Haemophilus influenzae phage HP2]; hypothetical protein 3704853..3706019 Yersinia pseudotuberculosis IP 32953 2954660 YP_071650.1 CDS YPTB3148 NC_006155.1 3706022 3706477 D similar to orf24 [Haemophilus phage HP1] sp|P51726|YO24_BPHP1 TAIL TUBE PROTEIN (ORF24), E()=1.00e-41, 55% identity.; hypothetical protein 3706022..3706477 Yersinia pseudotuberculosis IP 32953 2954661 YP_071651.1 CDS YPTB3149 NC_006155.1 3706487 3706789 D phage P2 holin-like protein 3706487..3706789 Yersinia pseudotuberculosis IP 32953 2954662 YP_071652.1 CDS YPTB3150 NC_006155.1 3706786 3707127 D probable transmembrane domain: 6 26.; hypothetical protein 3706786..3707127 Yersinia pseudotuberculosis IP 32953 2954663 YP_071653.1 CDS YPTB3151 NC_006155.1 3707127 3707501 D hypothetical protein 3707127..3707501 Yersinia pseudotuberculosis IP 32953 2954664 YP_071654.1 CDS YPTB3152 NC_006155.1 3707616 3707891 D hypothetical protein 3707616..3707891 Yersinia pseudotuberculosis IP 32953 2954665 YP_071655.1 CDS YPTB3153 NC_006155.1 3708117 3710093 D similar to Escherichia coli ECs2641 tail protein (25.6% evalue=1.E-16); Escherichia coli Z2987 tail fiber component of prophage CP-933T (25.6% evalue=2.E-16); bacteriophage tail protein 3708117..3710093 Yersinia pseudotuberculosis IP 32953 2954666 YP_071656.1 CDS YPTB3154 NC_006155.1 3710090 3710419 D hypothetical protein 3710090..3710419 Yersinia pseudotuberculosis IP 32953 2954667 YP_071657.1 CDS YPTB3155 NC_006155.1 3710416 3711600 D similar to (AY027935) orf29 [Haemophilus influenzae phage HP2], E()=1.00e-109, 48% identity.; bacteriophage protein 3710416..3711600 Yersinia pseudotuberculosis IP 32953 2954668 YP_071658.1 CDS YPTB3156 NC_006155.1 3711593 3712216 D similar to (AY027935) orf30 [Haemophilus influenzae phage HP2], E()=8.00e-42, 48% identity.; bacteriophage protein 3711593..3712216 Yersinia pseudotuberculosis IP 32953 2954669 YP_071659.1 CDS YPTB3157 NC_006155.1 3712226 3713821 D similar to (AY027935) orf31 [Phage HP2] evalue=4e-46, Id=36% in the N-terminal region.; hypothetical protein 3712226..3713821 Yersinia pseudotuberculosis IP 32953 2954670 YP_071660.1 CDS YPTB3158 NC_006155.1 3713821 3714339 D similar to Salmonella typhi STY1073 hypothetical prophage protein (31.7% evalue=1.E-12); Salmonella typhimurium STM2234 tail fiber assembly protein (33.3% evalue=9.E-17); bacteriophage protein 3713821..3714339 Yersinia pseudotuberculosis IP 32953 2954671 YP_071661.1 CDS YPTB3159 NC_006155.1 3714336 3715046 D similar to (AY027935) orf33 [Haemophilus influenzae phage HP2], E()=1.00e-16, 26% identity.; bacteriophage protein 3714336..3715046 Yersinia pseudotuberculosis IP 32953 2954672 YP_071662.1 CDS YPTB3160 NC_006155.1 3715039 3715593 D hypothetical protein 3715039..3715593 Yersinia pseudotuberculosis IP 32953 2954673 YP_071663.1 CDS YPTB3161 NC_006155.1 3715590 3717311 D similar to Pseudomonas aeruginosa PA0095 conserved hypothetical protein (23.3% evalue=5.E-09); hypothetical protein 3715590..3717311 Yersinia pseudotuberculosis IP 32953 2954674 YP_071664.1 CDS int NC_006155.1 3718038 3719252 R similar to Yersinia pestis YPO0887 int; integrase (99.7% evalue=0); Escherichia coli ECs4534 integrase (65.5% evalue=1.E-153); phage integrase complement(3718038..3719252) Yersinia pseudotuberculosis IP 32953 2955892 YP_071665.1 CDS lysS NC_006155.1 3719685 3721202 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(3719685..3721202) Yersinia pseudotuberculosis IP 32953 2955980 YP_071666.1 CDS prfB NC_006155.1 3721212 3722310 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(join(3721212..3722237,3722236..3722310)) Yersinia pseudotuberculosis IP 32953 2954675 YP_071667.1 CDS recJ NC_006155.1 3722489 3724222 R 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ complement(3722489..3724222) Yersinia pseudotuberculosis IP 32953 2956418 YP_071668.1 CDS dsbC NC_006155.1 3724229 3724945 R DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC complement(3724229..3724945) Yersinia pseudotuberculosis IP 32953 2955488 YP_071669.1 CDS xerD NC_006155.1 3724976 3725875 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3724976..3725875) Yersinia pseudotuberculosis IP 32953 2956907 YP_071670.1 CDS fldB NC_006155.1 3725982 3726500 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 3725982..3726500 Yersinia pseudotuberculosis IP 32953 2955556 YP_071671.1 CDS creD NC_006155.1 3726585 3728063 R similar to Yersinia pestis YPO0894 creD; membrane protein (99.7% evalue=0); Escherichia coli Z6003 creD; tolerance to colicin E2 (47.4% evalue=1.E-111); hypothetical protein complement(3726585..3728063) Yersinia pseudotuberculosis IP 32953 2955360 YP_071672.1 CDS creC NC_006155.1 3728163 3729581 R part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC complement(3728163..3729581) Yersinia pseudotuberculosis IP 32953 2955359 YP_071673.1 CDS creB NC_006155.1 3729592 3730290 R response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB complement(3729592..3730290) Yersinia pseudotuberculosis IP 32953 2955358 YP_071674.1 CDS YPTB3172 NC_006155.1 3730290 3730715 R similar to Yersinia pestis YPO0896a conserved hypothetical protein (99.2% evalue=2.E-81); Escherichia coli JW2864 ygfX; Hypothetical protein (52.3% evalue=5.E-36); hypothetical protein complement(3730290..3730715) Yersinia pseudotuberculosis IP 32953 2954676 YP_071675.1 CDS YPTB3173 NC_006155.1 3730696 3730962 R similar to Yersinia pestis YPO0897 conserved hypothetical protein (100% evalue=9.E-48); Escherichia coli ECs3769 hypothetical protein (81.8% evalue=2.E-39); hypothetical protein complement(3730696..3730962) Yersinia pseudotuberculosis IP 32953 2954677 YP_071676.1 CDS YPTB3174 NC_006155.1 3731279 3732271 D physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator 3731279..3732271 Yersinia pseudotuberculosis IP 32953 2954678 YP_071677.1 CDS YPTB3175 NC_006155.1 3732344 3732841 R similar to Yersinia pestis YPO0899 membrane protein (100% evalue=3.E-93); Ralstonia solanacearum RS01761 hypothetical transmembrane protein (45.2% evalue=1.E-34); hypothetical protein complement(3732344..3732841) Yersinia pseudotuberculosis IP 32953 2954679 YP_071678.1 CDS YPTB3176 NC_006155.1 3733099 3733800 R similar to Yersinia pestis YPO0900 hemolysin III (99.1% evalue=1.E-129); Salmonella typhimurium STM3049 yqfA; hemolysin (78.4% evalue=3.E-94); hemolysin III complement(3733099..3733800) Yersinia pseudotuberculosis IP 32953 2954680 YP_071679.1 CDS YPTB3177 NC_006155.1 3734001 3735104 R similar to Yersinia pestis YPO1686 exported protein (61.2% evalue=1.E-111); hypothetical protein complement(3734001..3735104) Yersinia pseudotuberculosis IP 32953 2954681 YP_071680.1 CDS YPTB3179 NC_006155.1 3738418 3738855 R similar to Yersinia pestis YPO1461 hypothetical protein (32.6% evalue=2.E-12); hypothetical protein complement(3738418..3738855) Yersinia pseudotuberculosis IP 32953 2954683 YP_071681.1 CDS gcvP NC_006155.1 3739233 3742112 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(3739233..3742112) Yersinia pseudotuberculosis IP 32953 2955680 YP_071682.1 CDS gcsH NC_006155.1 3742324 3742710 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(3742324..3742710) Yersinia pseudotuberculosis IP 32953 2955678 YP_071683.1 CDS gcvT NC_006155.1 3742779 3743876 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(3742779..3743876) Yersinia pseudotuberculosis IP 32953 2955682 YP_071684.1 CDS visC NC_006155.1 3744597 3745817 R similar to Yersinia pestis YPO0908 visC; monooxygenase (100% evalue=0); Salmonella typhimurium STM3056 visC; monooxygenase (73.4% evalue=1.E-170); hypothetical protein complement(3744597..3745817) Yersinia pseudotuberculosis IP 32953 2956892 YP_071685.1 CDS ubiH NC_006155.1 3745990 3747168 R Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(3745990..3747168) Yersinia pseudotuberculosis IP 32953 2956855 YP_071686.1 CDS pepP NC_006155.1 3747220 3748533 R exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II complement(3747220..3748533) Yersinia pseudotuberculosis IP 32953 2956234 YP_071687.1 CDS YPTB3186 NC_006155.1 3748621 3749199 R the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein complement(3748621..3749199) Yersinia pseudotuberculosis IP 32953 2954684 YP_071688.1 CDS YPTB3187 NC_006155.1 3749536 3749865 D similar to Yersinia pestis YPO0912 conserved hypothetical protein (100% evalue=7.E-56); Escherichia coli Z4247 ygfE; orf, hypothetical protein (79.8% evalue=9.E-45); Z-ring-associated protein 3749536..3749865 Yersinia pseudotuberculosis IP 32953 2954685 YP_071689.1 CDS YPTB3188 NC_006155.1 3750229 3750825 D similar to Yersinia pestis YPO0913 5-formyltetrahydrofolate cyclo-ligase-family protein (99.4% evalue=1.E-115); Escherichia coli b2912 ygfA; hypothetical 21.1 kD protein in ssr-serA intergenic region (O182) (69.6% evalue=3.E-72); Methenyl-THF synthetase-family protein (MTHFS) 3750229..3750825 Yersinia pseudotuberculosis IP 32953 2954686 YP_071690.1 CDS serA NC_006155.1 3751090 3752331 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(3751090..3752331) Yersinia pseudotuberculosis IP 32953 2956594 YP_071691.1 CDS rpiA NC_006155.1 3752638 3753294 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(3752638..3753294) Yersinia pseudotuberculosis IP 32953 2956485 YP_071692.1 CDS iciA NC_006155.1 3753636 3754544 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3753636..3754544 Yersinia pseudotuberculosis IP 32953 2955864 YP_071693.1 CDS yggE NC_006155.1 3754555 3755334 R similar to Yersinia pestis YPO0917 yggE; exported protein (99.2% evalue=1.E-139); Salmonella typhi STY3221 conserved hypothetical protein (64.9% evalue=7.E-88); hypothetical protein complement(3754555..3755334) Yersinia pseudotuberculosis IP 32953 2957050 YP_071694.1 CDS YPTB3193 NC_006155.1 3755524 3756141 R Involved in the export of arginine; arginine exporter protein complement(3755524..3756141) Yersinia pseudotuberculosis IP 32953 2954687 YP_071695.1 CDS YPTB3194 NC_006155.1 3756404 3757273 R similar to Yersinia pestis YPO0919 membrane protein (100% evalue=1.E-157); Salmonella typhi STY3223 membrane protein (66.4% evalue=1.E-105); MscS family mechanosensitive ion channel protein complement(3756404..3757273) Yersinia pseudotuberculosis IP 32953 2954688 YP_071696.2 CDS fbaA NC_006155.1 3757711 3758778 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(3757711..3758778) Yersinia pseudotuberculosis IP 32953 2955530 YP_071697.1 CDS pgk NC_006155.1 3758911 3760074 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3758911..3760074) Yersinia pseudotuberculosis IP 32953 2956242 YP_071698.1 CDS epd NC_006155.1 3760177 3761193 R NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase complement(3760177..3761193) Yersinia pseudotuberculosis IP 32953 2955509 YP_071699.1 CDS tktA NC_006155.1 3761572 3763566 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3761572..3763566) Yersinia pseudotuberculosis IP 32953 2956707 YP_071700.1 CDS YPTB3199 NC_006155.1 3764057 3764809 D similar to Yersinia pestis YPO0927 metalloprotease (99.6% evalue=1.E-137); Salmonella typhi STY3237 metalloprotease (73.8% evalue=1.E-104); lipoprotein 3764057..3764809 Yersinia pseudotuberculosis IP 32953 2954689 YP_071701.1 CDS YPTB3200 NC_006155.1 3764921 3765241 R similar to Yersinia pestis YPO0928 Rieske protein (100% evalue=8.E-60); Ralstonia solanacearum RS04099 nagAb, RSc1088; probable ferredoxin subunit of A ring-hydroxylating dioxygenase oxidoreductase (39.3% evalue=6.E-17); Rieske protein complement(3764921..3765241) Yersinia pseudotuberculosis IP 32953 2954690 YP_071702.1 CDS tnp NC_006155.1 3765452 3765910 R similar to Yersinia pestis YPO3280 tnp; transposase for the IS1541 insertion element (100% evalue=6.E-89); transposase IS1541 complement(3765452..3765910) Yersinia pseudotuberculosis IP 32953 2956713 YP_071703.1 CDS speA NC_006155.1 3766111 3768090 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(3766111..3768090) Yersinia pseudotuberculosis IP 32953 2956623 YP_071704.1 CDS metK NC_006155.1 3769297 3770451 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3769297..3770451 Yersinia pseudotuberculosis IP 32953 2956028 YP_071705.1 CDS SprT NC_006155.1 3770644 3771156 D similar to Yersinia pestis YPO0932 conserved hypothetical protein (98.2% evalue=1.E-96); Escherichia coli b2944 sprT; sprT protein (69.1% evalue=3.E-63); hypothetical protein 3770644..3771156 Yersinia pseudotuberculosis IP 32953 2956632 YP_071706.1 CDS endA NC_006155.1 3771254 3771961 D similar to Yersinia pestis YPO0933 endA, nucM; endonuclease I (100% evalue=1.E-142); Salmonella typhimurium STM3093 endA; DNA-specific endonuclease I (76.1% evalue=1.E-108); endonuclease I 3771254..3771961 Yersinia pseudotuberculosis IP 32953 2955505 YP_071707.1 CDS YPTB3206 NC_006155.1 3772297 3773028 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3772297..3773028 Yersinia pseudotuberculosis IP 32953 2954691 YP_071708.1 CDS gshB NC_006155.1 3773054 3774013 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3773054..3774013 Yersinia pseudotuberculosis IP 32953 2955751 YP_071709.1 CDS YPTB3208 NC_006155.1 3774129 3774692 D similar to Yersinia pestis YPO0936 conserved hypothetical protein (99.4% evalue=1.E-103); Salmonella typhi STY3249 conserved hypothetical protein (70% evalue=3.E-71); hypothetical protein 3774129..3774692 Yersinia pseudotuberculosis IP 32953 2954692 YP_071710.1 CDS YPTB3209 NC_006155.1 3774692 3775114 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3774692..3775114 Yersinia pseudotuberculosis IP 32953 2954693 YP_071711.1 CDS YPTB3210 NC_006155.1 3775294 3776178 D similar to Yersinia pestis YPO0938 carbon-nitrogen hydrolase (100% evalue=1.E-170); Pseudomonas aeruginosa PA0293 probable hydratase (64.1% evalue=1.E-107); carbon-nitrogen hydrolase 3775294..3776178 Yersinia pseudotuberculosis IP 32953 2954694 YP_071712.1 CDS YPTB3211 NC_006155.1 3776182 3777297 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 3776182..3777297 Yersinia pseudotuberculosis IP 32953 2954695 YP_071713.1 CDS YPTB3212 NC_006155.1 3777406 3778530 R similar to Yersinia pestis YPO0940 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs3827 protein transport (56.9% evalue=1.E-93); MTB family outer membrane protein complement(3777406..3778530) Yersinia pseudotuberculosis IP 32953 2954696 YP_071714.1 CDS YPTB3213 NC_006155.1 3778550 3779248 D similar to Yersinia pestis YPO0941 conserved hypothetical protein (99.5% evalue=1.E-127); Salmonella typhi STY3253 conserved hypothetical protein (70.1% evalue=4.E-84); hypothetical protein 3778550..3779248 Yersinia pseudotuberculosis IP 32953 2954697 YP_071715.1 CDS proC NC_006155.1 3779381 3780202 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3779381..3780202 Yersinia pseudotuberculosis IP 32953 2956324 YP_071716.1 CDS yggT NC_006155.1 3780490 3781044 D similar to Yersinia pestis YPO0943 yggT; membrane protein (89.1% evalue=3.E-87); Escherichia coli ECs3828 resistance protein (57.2% evalue=2.E-57); hypothetical protein 3780490..3781044 Yersinia pseudotuberculosis IP 32953 2957051 YP_071717.1 CDS YPTB3216 NC_006155.1 3781041 3781331 D similar to Yersinia pestis YPO0944 conserved hypothetical protein (96.8% evalue=2.E-46); Escherichia coli ECs3829 hypothetical protein (81% evalue=5.E-40); hypothetical protein 3781041..3781331 Yersinia pseudotuberculosis IP 32953 2954698 YP_071718.1 CDS YPTB3217 NC_006155.1 3781431 3782024 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3781431..3782024 Yersinia pseudotuberculosis IP 32953 2954699 YP_071719.1 CDS YPTB3218 NC_006155.1 3782017 3783147 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3782017..3783147 Yersinia pseudotuberculosis IP 32953 2954700 YP_071720.1 CDS YPTB3219 NC_006155.1 3783316 3792627 R similar to Yersinia pestis YPO0947 virulence determinant (94.8% evalue=0); Vibrio cholerae VC1451 RTX toxin RtxA (32.3% evalue=2.E-28); pore forming RTX toxin family protein complement(3783316..3792627) Yersinia pseudotuberculosis IP 32953 2954701 YP_071721.1 CDS YPTB3220 NC_006155.1 3793132 3793890 R similar to Salmonella typhi STY3262 conserved hypothetical protein (59.1% evalue=2.E-76); Escherichia coli ECs3834 hypothetical protein (60% evalue=4.E-76); hypothetical protein complement(3793132..3793890) Yersinia pseudotuberculosis IP 32953 2954702 YP_071722.1 CDS YPTB3221 NC_006155.1 3793978 3794904 R catalyzes the formation of glutamate from glutamine; glutaminase complement(3793978..3794904) Yersinia pseudotuberculosis IP 32953 2954703 YP_071723.1 CDS YPTB3222 NC_006155.1 3795015 3795341 R similar to Yersinia pestis YPO0950 conserved hypothetical protein (100% evalue=6.E-60); Escherichia coli JW2926 yggL; Hypothetical protein (f118) (78.7% evalue=3.E-46); hypothetical protein complement(3795015..3795341) Yersinia pseudotuberculosis IP 32953 2954704 YP_071724.1 CDS trmB NC_006155.1 3795341 3796060 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(3795341..3796060) Yersinia pseudotuberculosis IP 32953 2954705 YP_071725.1 CDS mutY NC_006155.1 3796473 3797588 D similar to Yersinia pestis YPO0952 mutY, mutB; A/G-specific adenine glycosylase (99.4% evalue=0); Escherichia coli b2961 mutY, micA; A/G-specific adenine glycosylase (75.8% evalue=1.E-158); adenine DNA glycosylase 3796473..3797588 Yersinia pseudotuberculosis IP 32953 2956111 YP_071726.1 CDS YPTB3225 NC_006155.1 3797766 3798038 D similar to Yersinia pestis YPO0953 conserved hypothetical protein (98.8% evalue=8.E-47); Escherichia coli ECs3838 hypothetical protein (83.3% evalue=1.E-39); hypothetical protein 3797766..3798038 Yersinia pseudotuberculosis IP 32953 2954706 YP_071727.2 CDS mltC NC_006155.1 3798221 3799297 D Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 3798221..3799297 Yersinia pseudotuberculosis IP 32953 2956051 YP_071728.2 CDS YPTB3227 NC_006155.1 3799579 3800679 D similar to Yersinia pestis YPO1310 periplasmic substrate-binding transport protein (40.7% evalue=4.E-70); hypothetical protein 3799579..3800679 Yersinia pseudotuberculosis IP 32953 2954707 YP_071729.1 CDS YPTB3228 NC_006155.1 3800672 3802816 D similar to Yersinia pestis YPO0956 hydroxamate-type ferrisiderophore receptor (99.7% evalue=0); Pseudomonas aeruginosa PA0151 probable TonB-dependent receptor (50.4% evalue=0); hydroxamate-type ferrisiderophore receptor 3800672..3802816 Yersinia pseudotuberculosis IP 32953 2954708 YP_071730.1 CDS YPTB3229 NC_006155.1 3803079 3804098 R similar to Yersinia pestis YPO0957 sugar transport system permease (100% evalue=0); Sinorhizobium meliloti SMb20854 sugar uptake ABC transporter permease (46% evalue=2.E-66); sugar ABC transporter permease complement(3803079..3804098) Yersinia pseudotuberculosis IP 32953 2954709 YP_071731.1 CDS mglA NC_006155.1 3804095 3805594 R similar to Yersinia pestis YPO0958 mglA, rbsA; sugar transport ATP-binding protein (99.5% evalue=0); Sinorhizobium meliloti SMc02337 ATP-binding ABC transporter protein (47.6% evalue=1.E-125); sugar ABC transporter ATPase complement(3804095..3805594) Yersinia pseudotuberculosis IP 32953 2956033 YP_071732.1 CDS YPTB3231 NC_006155.1 3805640 3806599 R similar to Yersinia pestis YPO0959 sugar ABC transporter periplasmic binding protein (99% evalue=1.E-179); Sinorhizobium meliloti SMb20856 sugar uptake ABC transporter periplasmic solute-binding protein precursor (39.3% evalue=1.E-58); sugar ABC transporter periplasmic binding protein complement(3805640..3806599) Yersinia pseudotuberculosis IP 32953 2954710 YP_071733.1 CDS speC NC_006155.1 3807164 3809326 R similar to Yersinia pestis YPO0960 speC; ornithine decarboxylase (99.8% evalue=0); Escherichia coli Z4310 speC; ornithine decarboxylase isozyme (73.3% evalue=0); ornithine decarboxylase complement(3807164..3809326) Yersinia pseudotuberculosis IP 32953 2956624 YP_071734.1 CDS insA NC_006155.1 3812320 3812595 R similar to Yersinia pestis YPO0968 insA; insertion sequence protein (98.9% evalue=6.E-49); insertion sequence protein complement(3812320..3812595) Yersinia pseudotuberculosis IP 32953 2955887 YP_071735.1 CDS YPTB3237 NC_006155.1 3812691 3813458 R similar to Yersinia pestis YPO1474 exported protein (33.6% evalue=7.E-27); hypothetical protein complement(3812691..3813458) Yersinia pseudotuberculosis IP 32953 2954713 YP_071736.1 CDS YPTB3238 NC_006155.1 3813445 3815742 R similar to Yersinia pestis YPO1473 hypothetical protein (83.5% evalue=0); hypothetical protein complement(3813445..3815742) Yersinia pseudotuberculosis IP 32953 2954714 YP_071737.1 CDS insA NC_006155.1 3817314 3817589 R similar to Yersinia pestis YPO0968 insA; insertion sequence protein (96.7% evalue=9.E-48); insertion sequence protein complement(3817314..3817589) Yersinia pseudotuberculosis IP 32953 2955888 YP_071738.1 CDS YPTB3243 NC_006155.1 3817986 3818486 R hypothetical protein complement(3817986..3818486) Yersinia pseudotuberculosis IP 32953 2954717 YP_071739.1 CDS YPTB3244 NC_006155.1 3818487 3820709 R similar to Yersinia pestis YPO1473 hypothetical protein (46.8% evalue=1.E-179); hypothetical protein complement(3818487..3820709) Yersinia pseudotuberculosis IP 32953 2954718 YP_071740.1 CDS YPTB3245 NC_006155.1 3820724 3823072 R similar to Yersinia pestis YPO1472 conserved hypothetical protein (94.3% evalue=0); hypothetical protein complement(3820724..3823072) Yersinia pseudotuberculosis IP 32953 2954719 YP_071741.1 CDS clpB3 NC_006155.1 3823069 3825717 R similar to Yersinia pestis YPO1471 ATPase subunit of ATP-dependent protease (96.5% evalue=0); Clp ATPase complement(3823069..3825717) Yersinia pseudotuberculosis IP 32953 2955337 YP_071742.1 CDS YPTB3247 NC_006155.1 3826135 3826626 R similar to Yersinia pestis YPO1470 conserved hypothetical protein (100% evalue=5.E-93); hypothetical protein complement(3826135..3826626) Yersinia pseudotuberculosis IP 32953 2954720 YP_071743.1 CDS YPTB3248 NC_006155.1 3826630 3828366 R similar to Yersinia pestis YPO1469 exported protein (99.6% evalue=0); PAL/OmpA family membrane protein complement(3826630..3828366) Yersinia pseudotuberculosis IP 32953 2954721 YP_071744.1 CDS YPTB3249 NC_006155.1 3828366 3829052 R similar to Yersinia pestis YPO1468 membrane protein (98.6% evalue=1.E-131); hypothetical protein complement(3828366..3829052) Yersinia pseudotuberculosis IP 32953 2954722 YP_071745.1 CDS YPTB3250 NC_006155.1 3829049 3830401 R similar to Yersinia pestis YPO1467 conserved hypothetical protein (99.1% evalue=0); hypothetical protein complement(3829049..3830401) Yersinia pseudotuberculosis IP 32953 2954723 YP_071746.1 CDS YPTB3251 NC_006155.1 3830413 3831957 R similar to Yersinia pestis YPO1466 conserved hypothetical protein (100% evalue=0); hypothetical protein complement(3830413..3831957) Yersinia pseudotuberculosis IP 32953 2954724 YP_071747.1 CDS YPTB3252 NC_006155.1 3832006 3832506 R similar to Yersinia pestis YPO1465 conserved hypothetical protein (97.5% evalue=5.E-86); hypothetical protein complement(3832006..3832506) Yersinia pseudotuberculosis IP 32953 2954725 YP_071748.1 CDS insA NC_006155.1 3834445 3834708 R similar to Yersinia pestis YPO0981 insA; insertion element protein (93.1% evalue=1.E-43); insertion element protein complement(3834445..3834708) Yersinia pseudotuberculosis IP 32953 2955889 YP_071749.1 CDS YPTB3256 NC_006155.1 3834776 3835171 R similar to Yersinia pestis YPO0982 lipoprotein (98.4% evalue=5.E-69); lipoprotein complement(3834776..3835171) Yersinia pseudotuberculosis IP 32953 2954728 YP_071750.1 CDS YPTB3257 NC_006155.1 3835622 3836272 R similar to Yersinia pestis YPO0983 membrane protein (100% evalue=1.E-121); Salmonella typhi STY2608 conserved hypothetical protein (42.1% evalue=1.E-46); hypothetical protein complement(3835622..3836272) Yersinia pseudotuberculosis IP 32953 2954729 YP_071751.1 CDS yspI NC_006155.1 3837443 3838093 D similar to Yersinia pestis YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI (46.2% evalue=4.E-53); N-acylhomoserine lactone synthase 3837443..3838093 Yersinia pseudotuberculosis IP 32953 2957121 YP_071752.1 CDS yspR NC_006155.1 3838074 3838817 R similar to Yersinia pestis YPO2457 ypeR; quorum-sensing transcriptional activator YpeR (44.8% evalue=9.E-58); quorum-sensing transcriptional regulator complement(3838074..3838817) Yersinia pseudotuberculosis IP 32953 2957122 YP_071753.1 CDS YPTB3260 NC_006155.1 3839379 3840737 D similar to Yersinia pestis YPO0986 exported protein (98.6% evalue=0); Thermotoga maritima TM0033 hypothetical protein (26.6% evalue=5.E-34); hypothetical protein 3839379..3840737 Yersinia pseudotuberculosis IP 32953 2954730 YP_071754.1 CDS YPTB3261 NC_006155.1 3841125 3841958 D similar to Yersinia pestis YPO0987 exported protein (98.5% evalue=1.E-155); hypothetical protein 3841125..3841958 Yersinia pseudotuberculosis IP 32953 2954731 YP_071755.1 CDS YPTB3262 NC_006155.1 3842249 3843472 R similar to Yersinia pestis YPO0988 membrane protein (99.2% evalue=0); Caulobacter crescentus CC0751 multidrug resistance protein, (25% evalue=2.E-19); major facilitator superfamily efflux protein complement(3842249..3843472) Yersinia pseudotuberculosis IP 32953 2954732 YP_071756.1 CDS rhbC NC_006155.1 3843612 3845384 D similar to Sinorhizobium meliloti SMa2404 rhbC; RhbC rhizobactin siderophore biosynthesis protein (32.1% evalue=3.E-56); Anabaena all0394 hypothetical protein (28.9% evalue=1.E-53); siderophore biosynthesis protein, IucA familly 3843612..3845384 Yersinia pseudotuberculosis IP 32953 2956444 YP_071757.1 CDS iucB NC_006155.1 3845368 3846318 D similar to Yersinia pestis YPO0991 iucB; siderophore biosynthesis protein IucB (98.1% evalue=0); S. pombe SPBC17G9.06C spbc17g9.06c; hypothetical protein (42.2% evalue=5.E-41); siderophore biosynthesis protein IucB 3845368..3846318 Yersinia pseudotuberculosis IP 32953 2955903 YP_071758.1 CDS iucC NC_006155.1 3846315 3848063 D similar to Yersinia pestis YPO0992 iucC; siderophore biosynthesis protein IucC (99.8% evalue=0); Sinorhizobium meliloti SMa2410 rhbF; RhbF rhizobactin siderophore biosynthesis protein RhsF (34.8% evalue=5.E-89); siderophore biosynthesis protein IucC 3846315..3848063 Yersinia pseudotuberculosis IP 32953 2955904 YP_071759.1 CDS iucD NC_006155.1 3848060 3849388 D deleted EC_number 1.13.12.10; similar to Yersinia pestis YPO0993 iucD; siderophore biosynthesis protein IucD (99.5% evalue=0); Mesorhizobium loti mlr5923 lysine:N6-hydroxylase (35.5% evalue=4.E-65); siderophore biosynthesis protein IucD 3848060..3849388 Yersinia pseudotuberculosis IP 32953 2955905 YP_071760.1 CDS iutA NC_006155.1 3849460 3851640 D similar to Yersinia pestis YPO0994 iutA; ferric siderophore receptor (99.8% evalue=0); Pseudomonas aeruginosa PA4675 probable TonB-dependent receptor (46.8% evalue=0); ferric siderophore receptor 3849460..3851640 Yersinia pseudotuberculosis IP 32953 2955906 YP_071761.1 CDS YPTB3268 NC_006155.1 3851947 3853371 R similar to Yersinia pestis YPO0995 Sodium:galactoside symporter family protein (100% evalue=0); Bacillus subtilis BG12795 gutP, ydjD; probable glucitol symporter (31.7% evalue=1.E-57); Sodium:galactoside symporter (GPH) family protein complement(3851947..3853371) Yersinia pseudotuberculosis IP 32953 2954733 YP_071762.1 CDS YPTB3269 NC_006155.1 3853533 3854618 R similar to Mycobacterium tuberculosis Rv3096 hypothetical protein Rv3096 (33.5% evalue=2.E-54); Mycobacterium tuberculosis_CDC1551MT3180 hypothetical protein (33.5% evalue=2.E-54); hypothetical protein complement(3853533..3854618) Yersinia pseudotuberculosis IP 32953 2954734 YP_071763.1 CDS YPTB3270 NC_006155.1 3854924 3855919 D similar to Yersinia pestis YPO0758 LacI-family regulatory protein (99.3% evalue=0); Mesorhizobium loti mll4964 transcriptional regulator, LacI (ribose operon repressor) family (37% evalue=2.E-50); LacI-family regulatory protein 3854924..3855919 Yersinia pseudotuberculosis IP 32953 2954735 YP_071764.1 CDS YPTB3271 NC_006155.1 3856201 3857580 D similar to Yersinia pestis YPO0759 Sodium:sulfate symporter-family protein (98.6% evalue=0); Pasteurella multocida PM1167 hypothetical HI0608 (60.3% evalue=1.E-154); sodium/sulfate symporter 3856201..3857580 Yersinia pseudotuberculosis IP 32953 2954736 YP_071765.1 CDS YPTB3272 NC_006155.1 3857760 3858173 R similar to Yersinia pestis YPO0760 membrane protein (100% evalue=3.E-73); Escherichia coli b4011 yjaA; hypothetical 14.4 kD protein in rrfE-metA intergenic region (O127) (40.3% evalue=1.E-16); hypothetical protein complement(3857760..3858173) Yersinia pseudotuberculosis IP 32953 2954737 YP_071766.1 CDS YPTB3273 NC_006155.1 3858717 3859103 R similar to Yersinia pestis YPO0761 hypothetical protein (96.2% evalue=1.E-37); hypothetical protein complement(3858717..3859103) Yersinia pseudotuberculosis IP 32953 2954738 YP_071767.1 CDS YPTB3274 NC_006155.1 3859378 3859902 R hypothetical protein complement(3859378..3859902) Yersinia pseudotuberculosis IP 32953 2954739 YP_071768.1 CDS YPTB3275 NC_006155.1 3860127 3860465 R similar to Ralstonia solanacearum RS02401 hypothetical protein (33.9% evalue=9.E-13); hypothetical protein complement(3860127..3860465) Yersinia pseudotuberculosis IP 32953 2954740 YP_071769.1 CDS YPTB3276 NC_006155.1 3860595 3861122 R hypothetical protein complement(3860595..3861122) Yersinia pseudotuberculosis IP 32953 2954741 YP_071770.1 CDS YPTB3279 NC_006155.1 3864435 3865094 R hypothetical protein complement(3864435..3865094) Yersinia pseudotuberculosis IP 32953 2954744 YP_071771.1 CDS YPTB3280 NC_006155.1 3865483 3865908 R hypothetical protein complement(3865483..3865908) Yersinia pseudotuberculosis IP 32953 2954745 YP_071772.1 CDS YPTB3281 NC_006155.1 3866252 3866743 R hypothetical protein complement(3866252..3866743) Yersinia pseudotuberculosis IP 32953 2954746 YP_071773.1 CDS YPTB3282 NC_006155.1 3866709 3871193 R similar to Yersinia pestis YPO0762 conserved hypothetical protein (98.4% evalue=0); Salmonella typhi STY0321 Rhs-family protein (27% evalue=5.E-84); hypothetical protein complement(3866709..3871193) Yersinia pseudotuberculosis IP 32953 2954747 YP_071774.1 CDS YPTB3283 NC_006155.1 3871207 3872526 R similar to Yersinia pestis YPO0763 hypothetical protein (99.7% evalue=0); hypothetical protein complement(3871207..3872526) Yersinia pseudotuberculosis IP 32953 2954748 YP_071775.1 CDS YPTB3284 NC_006155.1 3872552 3874777 R similar to Yersinia pestis YPO3606 Rhs accessory genetic element (77.7% evalue=0); hypothetical protein complement(3872552..3874777) Yersinia pseudotuberculosis IP 32953 2954749 YP_071776.1 CDS YPTB3285 NC_006155.1 3875363 3879133 R similar to Yersinia pestis YPO1672 conserved hypothetical protein (79.4% evalue=0); autotransporter secreted protein complement(3875363..3879133) Yersinia pseudotuberculosis IP 32953 2954750 YP_071777.1 CDS YPTB3286 NC_006155.1 3879789 3883553 R similar to Yersinia pestis YPO1672 conserved hypothetical protein (82.4% evalue=0); autotransporter secreted protein complement(3879789..3883553) Yersinia pseudotuberculosis IP 32953 2954751 YP_071778.1 CDS gntP NC_006155.1 3884565 3885908 R similar to Yersinia pestis YPO0767 gntP; gluconate transporter (100% evalue=0); Escherichia coli ECs5280 gluconate transport system permease 3 (82.9% evalue=0); fructuronate transporter complement(3884565..3885908) Yersinia pseudotuberculosis IP 32953 2955733 YP_071779.1 CDS YPTB3288 NC_006155.1 3887447 3887845 D similar to Yersinia pestis YPO0768 hypothetical protein (100% evalue=5.E-73); hypothetical protein 3887447..3887845 Yersinia pseudotuberculosis IP 32953 2954752 YP_071780.1 CDS YPTB3289 NC_006155.1 3888281 3889156 D similar to Yersinia pestis YPO0769 exported protein (99.6% evalue=1.E-163); Salmonella typhimurium STM2516 sinI; outer membrane protein (27% evalue=7.E-13); hypothetical protein 3888281..3889156 Yersinia pseudotuberculosis IP 32953 2954753 YP_071781.1 CDS YPTB3290 NC_006155.1 3889519 3891276 R similar to Yersinia pestis YPO0770 ABC-transporter transmembrane protein (99.6% evalue=0); Ralstonia solanacearum RS04233 probable composite ATP-binding transmembrane ABC transporter protein (34% evalue=6.E-85); iron ABC transporter permease complement(3889519..3891276) Yersinia pseudotuberculosis IP 32953 2954754 YP_071782.1 CDS YPTB3291 NC_006155.1 3891269 3893041 R similar to Yersinia pestis YPO0771 ABC-transporter transmembrane protein (99.3% evalue=0); Ralstonia solanacearum RS04232 probable composite ATP-binding transmembrane ABC transporter protein (36.7% evalue=1.E-108); iron ABC transporter permease complement(3891269..3893041) Yersinia pseudotuberculosis IP 32953 2954755 YP_071783.1 CDS YPTB3292 NC_006155.1 3893041 3894309 R similar to Yersinia pestis YPO0772 membrane protein (95.8% evalue=0); Sinorhizobium meliloti SMa2337 transmembrane transport protein (27.2% evalue=1.E-31); major facilitator superfamily AmpG-like permease complement(3893041..3894309) Yersinia pseudotuberculosis IP 32953 2954756 YP_071784.1 CDS YPTB3293 NC_006155.1 3894299 3895072 R similar to Yersinia pestis YPO0773 thioesterase (98.4% evalue=1.E-145); Pseudomonas aeruginosa PA4229 pchC; pyochelin biosynthetic protein PchC (38.5% evalue=5.E-41); thioesterase complement(3894299..3895072) Yersinia pseudotuberculosis IP 32953 2954757 YP_071785.1 CDS YPTB3294 NC_006155.1 3895065 3896192 R similar to Yersinia pestis YPO0774 conserved hypothetical protein (99.7% evalue=0); Ralstonia solanacearum RS04226 siderophore-like synthase (38.7% evalue=2.E-61); hypothetical protein complement(3895065..3896192) Yersinia pseudotuberculosis IP 32953 2954758 YP_071786.1 CDS YPTB3295 NC_006155.1 3896189 3897259 R similar to Yersinia pestis YPO0775 conserved hypothetical protein (98% evalue=0); hypothetical protein complement(3896189..3897259) Yersinia pseudotuberculosis IP 32953 2954759 YP_071787.1 CDS YPTB3296 NC_006155.1 3897256 3902922 R similar to Yersinia pestis YPO0776 siderophore biosysnthesis protein (96.2% evalue=0); Pseudomonas aeruginosa PA4225 pchF; pyochelin synthetase (34.3% evalue=0); siderophore biosysnthesis protein complement(3897256..3902922) Yersinia pseudotuberculosis IP 32953 2954760 YP_071788.1 CDS YPTB3297 NC_006155.1 3902935 3914595 R similar to Yersinia pestis YPO0778 siderophore biosysnthesis protein (96.9% evalue=0); high molecular weight siderophore biosynthesis protein complement(3902935..3914595) Yersinia pseudotuberculosis IP 32953 2954761 YP_071789.1 CDS YPTB3298 NC_006155.1 3914746 3916818 R similar to Yersinia pestis YPO1011 TonB-dependent outer membrane receptor (97.9% evalue=0); Anabaena all4026 similar to TonB-dependent receptor (28.4% evalue=8.E-73); TonB-dependent O.M. iron siderophore receptor/transporter complement(3914746..3916818) Yersinia pseudotuberculosis IP 32953 2954762 YP_071790.1 CDS YPTB3299 NC_006155.1 3917202 3918434 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(3917202..3918434) Yersinia pseudotuberculosis IP 32953 2954763 YP_071791.1 CDS YPTB3300 NC_006155.1 3918722 3920278 R similar to Yersinia pestis YPO1008 integral membrane efflux protein (99.6% evalue=0); Vibrio cholerae VC0863 conserved hypothetical protein (47.5% evalue=1.E-140); integral membrane efflux protein complement(3918722..3920278) Yersinia pseudotuberculosis IP 32953 2954764 YP_071792.1 CDS YPTB3301 NC_006155.1 3920994 3922820 D similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (58.1% evalue=0); hypothetical protein 3920994..3922820 Yersinia pseudotuberculosis IP 32953 2954765 YP_071793.1 CDS YPTB3302 NC_006155.1 3923045 3924922 D similar to Yersinia pestis YPO1007 antigenic leucine-rich repeat protein (74% evalue=0); hypothetical protein 3923045..3924922 Yersinia pseudotuberculosis IP 32953 2954766 YP_071794.1 CDS yapH NC_006155.1 3925028 3936148 R similar to Yersinia pestis YPO1004 yapH; autotransporter protein (97.8% evalue=0); Escherichia coli JW1502 aidA; Adhesin AIDA-I precursor (47.2% evalue=1.E-124); pertactin family virulence factor/autotransporter complement(3925028..3936148) Yersinia pseudotuberculosis IP 32953 2956952 YP_071795.1 CDS YPTB3304 NC_006155.1 3936986 3937573 R similar to Yersinia pestis YPO1003 exported protein (98.9% evalue=1.E-107); Salmonella typhimurium STM3650 periplasmic or exported protein (64.4% evalue=5.E-59); hypothetical protein complement(3936986..3937573) Yersinia pseudotuberculosis IP 32953 2954767 YP_071796.1 CDS YPTB3305 NC_006155.1 3937849 3939339 D similar to Yersinia pestis YPO3339 hypothetical protein (27.9% evalue=1.E-33); enterotoxin-like protein 3937849..3939339 Yersinia pseudotuberculosis IP 32953 2954768 YP_071797.1 CDS YPTB3306 NC_006155.1 3939458 3942577 R similar to Yersinia pestis YPO1001 integral membrane efflux protein (99.9% evalue=0); Sinorhizobium meliloti SMa1662 drug resistance protein (50.1% evalue=0); RND family drug efflux protein complement(3939458..3942577) Yersinia pseudotuberculosis IP 32953 2954769 YP_071798.1 CDS YPTB3307 NC_006155.1 3942590 3943900 R similar to Yersinia pestis YPO1000 drug efflux protein (97% evalue=0); Sinorhizobium meliloti SMa1664 drug resistance protein (37.3% evalue=1.E-64); HlyD family drug efflux protein complement(3942590..3943900) Yersinia pseudotuberculosis IP 32953 2954770 YP_071799.1 CDS YPTB3308 NC_006155.1 3944338 3946905 D similar to Yersinia pestis YPO0998 membrane protein (100% evalue=0); Pseudomonas aeruginosa PA2072 conserved hypothetical protein (42.3% evalue=0); hypothetical protein 3944338..3946905 Yersinia pseudotuberculosis IP 32953 2954771 YP_071800.1 CDS YPTB3309 NC_006155.1 3947088 3947603 D similar to Yersinia pestis YPO3931 insertion element IS1661 DNA-binding protein (100% evalue=7.E-97); IS1661 DNA-binding protein 3947088..3947603 Yersinia pseudotuberculosis IP 32953 2954772 YP_071801.1 CDS YPTB3310 NC_006155.1 3947657 3948442 D similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.6% evalue=1.E-150); IS1661 transposase 3947657..3948442 Yersinia pseudotuberculosis IP 32953 2954773 YP_071802.1 CDS YPTB3311 NC_006155.1 3949116 3950324 D similar to Yersinia pestis YPO1583 transposase for the IS285 insertion element (100% evalue=0); transposase 3949116..3950324 Yersinia pseudotuberculosis IP 32953 2954774 YP_071803.1 CDS YPTB3312 NC_006155.1 3950348 3950653 D similar to Yersinia pestis YPO0754 membrane protein (98.9% evalue=2.E-51); Escherichia coli JW4119 yjeO; Hypothetical protein (27% evalue=3.E-07); hypothetical protein 3950348..3950653 Yersinia pseudotuberculosis IP 32953 2954775 YP_071804.1 CDS slyB NC_006155.1 3950902 3951369 D similar to Yersinia pestis YPO2373 slyB, pcpY; lipoprotein (69.6% evalue=4.E-60); Escherichia coli ECs2350 outer membrane protein (61.9% evalue=5.E-53); outer membrane lipoprotein Pcp 3950902..3951369 Yersinia pseudotuberculosis IP 32953 2956611 YP_071805.1 CDS YPTB3314 NC_006155.1 3951522 3951803 R similar to Yersinia pestis YPO0751 possible membrane protein, 100% identical.; hypothetical protein complement(3951522..3951803) Yersinia pseudotuberculosis IP 32953 2954776 YP_071806.1 CDS YPTB3315 NC_006155.1 3951877 3952332 R similar to Yersinia pestis YPO0750 membrane protein (99.3% evalue=1.E-80); hypothetical protein complement(3951877..3952332) Yersinia pseudotuberculosis IP 32953 2954777 YP_071807.1 CDS YPTB3316 NC_006155.1 3952329 3952802 R similar to Yersinia pestis YPO0749 hypothetical protein (100% evalue=1.E-110); hypothetical protein complement(3952329..3952802) Yersinia pseudotuberculosis IP 32953 2954778 YP_071808.1 CDS YPTB3317 NC_006155.1 3953128 3953316 R similar to Yersinia pestis YPO0748 hypothetical protein, 98% identical.; hypothetical protein complement(3953128..3953316) Yersinia pseudotuberculosis IP 32953 2954779 YP_071809.1 CDS motB NC_006155.1 3953385 3954179 R similar to Yersinia pestis YPO0747 motB, lafU; chemotaxis membrane protein (99% evalue=1.E-168); Escherichia coli ECs0256 motility protein (48.2% evalue=3.E-59); hypothetical protein complement(3953385..3954179) Yersinia pseudotuberculosis IP 32953 2956071 YP_071810.1 CDS motA NC_006155.1 3954296 3955162 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(3954296..3955162) Yersinia pseudotuberculosis IP 32953 2956069 YP_071811.1 CDS fliA NC_006155.1 3955178 3955873 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(3955178..3955873) Yersinia pseudotuberculosis IP 32953 2955592 YP_071812.1 CDS YPTB3321 NC_006155.1 3955879 3956349 R similar to Yersinia pestis YPO0744 flagellar biogenesis protein (91.6% evalue=1.E-75); flagellar biogenesis protein complement(3955879..3956349) Yersinia pseudotuberculosis IP 32953 2954780 YP_071813.1 CDS YPTB3322 NC_006155.1 3956375 3957472 R similar to Yersinia pestis YPO0743 flagellar hook-length control protein (86.5% evalue=1.E-180); Vibrio cholerae VC2128 flagellar hook-length control protein FliK, (23.9% evalue=4.E-08); flagellar hook-length control protein complement(3956375..3957472) Yersinia pseudotuberculosis IP 32953 2954781 YP_071814.1 CDS YPTB3323 NC_006155.1 3957474 3957800 R similar to Yersinia pestis YPO0742 hypothetical protein (93.5% evalue=7.E-50); hypothetical protein complement(3957474..3957800) Yersinia pseudotuberculosis IP 32953 2954782 YP_071815.1 CDS fliS NC_006155.1 3957802 3958185 R similar to Yersinia pestis YPO0741 fliS, lafC; flagellar protein (96% evalue=2.E-64); Salmonella typhimurium STM1961 fliS; flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) (37.3% evalue=2.E-18); flagellar protein complement(3957802..3958185) Yersinia pseudotuberculosis IP 32953 2955622 YP_071816.1 CDS fliD NC_006155.1 3958195 3959481 R similar to Yersinia pestis YPO0740 fliD; flagellar hook-associated protein (85.3% evalue=0); Pseudomonas aeruginosa PA1094 fliD; flagellar capping protein FliD (25.2% evalue=3.E-28); flagellar hook-associated protein complement(3958195..3959481) Yersinia pseudotuberculosis IP 32953 2955595 YP_071817.1 CDS flaA NC_006155.1 3959701 3960903 R similar to Yersinia pestis YPO0739 flaA3; flagellin (79% evalue=1.E-165); flagellin complement(3959701..3960903) Yersinia pseudotuberculosis IP 32953 2955554 YP_071818.1 CDS YPTB3327 NC_006155.1 3961527 3962573 D similar to Yersinia pestis YPO0736 regulatory protein (97.7% evalue=0); Vibrio cholerae VC0984 cholera toxin transcriptional activator (26.5% evalue=6.E-09); regulatory protein 3961527..3962573 Yersinia pseudotuberculosis IP 32953 2954783 YP_071819.1 CDS YPTB3328 NC_006155.1 3962554 3963000 D similar to Yersinia pestis YPO0735 hypothetical protein (98.1% evalue=5.E-56); hypothetical protein 3962554..3963000 Yersinia pseudotuberculosis IP 32953 2954784 YP_071820.1 CDS YPTB3329 NC_006155.1 3963147 3964160 R similar to Yersinia pestis YPO0734 hypothetical protein (98.1% evalue=1.E-179); hypothetical protein complement(3963147..3964160) Yersinia pseudotuberculosis IP 32953 2954785 YP_071821.1 CDS flgL NC_006155.1 3964172 3965095 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL complement(3964172..3965095) Yersinia pseudotuberculosis IP 32953 2955580 YP_071822.1 CDS flgK NC_006155.1 3965124 3966485 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(3965124..3966485) Yersinia pseudotuberculosis IP 32953 2955578 YP_071823.1 CDS flgJ NC_006155.1 3966598 3966891 R FlgJ; flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain; peptidoglycan hydrolase complement(3966598..3966891) Yersinia pseudotuberculosis IP 32953 2955576 YP_071824.1 CDS flgI NC_006155.1 3966901 3968076 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA complement(3966901..3968076) Yersinia pseudotuberculosis IP 32953 2955574 YP_071825.1 CDS flgH NC_006155.1 3968090 3968755 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; flagellar basal body L-ring protein complement(3968090..3968755) Yersinia pseudotuberculosis IP 32953 2955572 YP_071826.1 CDS flgG NC_006155.1 3968790 3969575 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(3968790..3969575) Yersinia pseudotuberculosis IP 32953 2955571 YP_071827.1 CDS flgF NC_006155.1 3969643 3970374 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF complement(3969643..3970374) Yersinia pseudotuberculosis IP 32953 2955568 YP_071828.1 CDS flgE NC_006155.1 3970374 3971618 R the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE complement(3970374..3971618) Yersinia pseudotuberculosis IP 32953 2955567 YP_071829.1 CDS flgD NC_006155.1 3971673 3972329 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production; flagellar basal body rod modification protein complement(3971673..3972329) Yersinia pseudotuberculosis IP 32953 2955565 YP_071830.1 CDS flgC NC_006155.1 3972332 3972757 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgC complement(3972332..3972757) Yersinia pseudotuberculosis IP 32953 2955563 YP_071831.1 CDS flgB NC_006155.1 3972760 3973206 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Yersinia has 2 copies of flgB and other flagellar genes; flagellar basal-body rod protein FlgB complement(3972760..3973206) Yersinia pseudotuberculosis IP 32953 2955561 YP_071832.2 CDS flgA NC_006155.1 3973399 3974112 D required for the assembly of the flagellar basal body P-ring; the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella; flagellar basal body P-ring biosynthesis protein FlgA 3973399..3974112 Yersinia pseudotuberculosis IP 32953 2955559 YP_071833.1 CDS YPTB3342 NC_006155.1 3974322 3974588 D similar to Yersinia pestis YPO0720 flagellar regulatory protein (100% evalue=1.E-43); flagellar regulatory protein 3974322..3974588 Yersinia pseudotuberculosis IP 32953 2954786 YP_071834.1 CDS YPTB3343 NC_006155.1 3974595 3975020 D similar to Yersinia pestis YPO0719 hypothetical protein (99% evalue=2.E-56); hypothetical protein 3974595..3975020 Yersinia pseudotuberculosis IP 32953 2954787 YP_071835.1 CDS YPTB3344 NC_006155.1 3975362 3975799 R similar to Yersinia pestis YPO0718 hypothetical protein (86.6% evalue=5.E-61); hypothetical protein complement(3975362..3975799) Yersinia pseudotuberculosis IP 32953 2954788 YP_071836.1 CDS fliI NC_006155.1 3975803 3977143 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(3975803..3977143) Yersinia pseudotuberculosis IP 32953 2955605 YP_071837.1 CDS fliH NC_006155.1 3977136 3977852 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(3977136..3977852) Yersinia pseudotuberculosis IP 32953 2955603 YP_071838.1 CDS fliG NC_006155.1 3977857 3978900 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(3977857..3978900) Yersinia pseudotuberculosis IP 32953 2955601 YP_071839.1 CDS fliF NC_006155.1 3978872 3980512 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein complement(3978872..3980512) Yersinia pseudotuberculosis IP 32953 2955599 YP_071840.1 CDS fliE NC_006155.1 3980522 3980902 R similar to Yersinia pestis YPO0713 fliE; flagellar hook-basal body complex protein (99.2% evalue=1.E-63); Pseudomonas aeruginosa PA1100 fliE; flagellar hook-basal body complex protein FliE (43.6% evalue=2.E-11); flagellar hook-basal body complex protein complement(3980522..3980902) Yersinia pseudotuberculosis IP 32953 2955597 YP_071841.1 CDS fleR NC_006155.1 3980919 3981947 R similar to Yersinia pestis YPO0712 fleR, flbD; sigma-54 transcriptional regulatory protein (99.7% evalue=0); Pseudomonas aeruginosa PA1099 fleR; two-component response regulator (49.5% evalue=8.E-86); Fis family transcriptional regulator complement(3980919..3981947) Yersinia pseudotuberculosis IP 32953 2955557 YP_071842.1 CDS fliM NC_006155.1 3982458 3983369 D similar to Yersinia pestis YPO0711 fliM; flagellar motor switch protein (99% evalue=1.E-170); flagellar motor switch protein 3982458..3983369 Yersinia pseudotuberculosis IP 32953 2955610 YP_071843.1 CDS fliN NC_006155.1 3983362 3983775 D similar to Yersinia pestis YPO0710 fliN, mopA; flagellar switch protein (100% evalue=6.E-71); Vibrio cholerae VC2125 flagellar motor switch protein FliN (38.3% evalue=2.E-18); flagellar switch protein 3983362..3983775 Yersinia pseudotuberculosis IP 32953 2955613 YP_071844.1 CDS fliP NC_006155.1 3983772 3984542 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3983772..3984542 Yersinia pseudotuberculosis IP 32953 2955615 YP_071845.1 CDS fliQ NC_006155.1 3984544 3984816 D similar to Yersinia pestis YPO0708 fliQ; flagellar assembly protein (100% evalue=4.E-42); Vibrio cholerae VC2122 flagellar biosynthetic protein FliQ (50% evalue=1.E-17); flagellar assembly/export protein, fliQ 3984544..3984816 Yersinia pseudotuberculosis IP 32953 2955617 YP_071846.1 CDS fliR NC_006155.1 3984823 3985596 D similar to Yersinia pestis YPO0707 fliR, mopE; flagellar assembly protein (100% evalue=1.E-142); Pseudomonas aeruginosa PA1448 fliR; flagellar biosynthetic protein FliR (37.8% evalue=3.E-37); flagellar assembly/export protein, fliR 3984823..3985596 Yersinia pseudotuberculosis IP 32953 2955620 YP_071847.1 CDS flhB NC_006155.1 3985596 3986729 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3985596..3986729 Yersinia pseudotuberculosis IP 32953 2955587 YP_071848.1 CDS flhA NC_006155.1 3986716 3988812 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3986716..3988812 Yersinia pseudotuberculosis IP 32953 2955585 YP_071849.1 CDS YPTB3358 NC_006155.1 3989015 3989584 D similar to Yersinia pestis YPO0703 lipoprotein (99.4% evalue=1.E-106); lipoprotein 3989015..3989584 Yersinia pseudotuberculosis IP 32953 2954789 YP_071850.1 CDS fepB NC_006155.1 3991527 3992606 D with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 3991527..3992606 Yersinia pseudotuberculosis IP 32953 2955544 YP_071851.1 CDS YPTB3361 NC_006155.1 3992818 3993921 R similar to Yersinia pestis YPO0700 Fimbrial protein (96.4% evalue=0); fimbrial protein complement(3992818..3993921) Yersinia pseudotuberculosis IP 32953 2954791 YP_071852.1 CDS YPTB3362 NC_006155.1 3993946 3994665 R similar to Yersinia pestis YPO0699 fimbrial chaperone protein (100% evalue=1.E-132); Escherichia coli JW2333 yfcS; Hypothetical fimbrial chaperone (43.7% evalue=6.E-57); fimbrial chaperone protein complement(3993946..3994665) Yersinia pseudotuberculosis IP 32953 2954792 YP_071853.1 CDS YPTB3363 NC_006155.1 3994683 3997163 R similar to Yersinia pestis YPO0698 outer membrane usher protein (99.7% evalue=0); Salmonella typhimurium STM0196 stfC; fimbrial outer membrane usher (44% evalue=0); outer membrane fimbrial usher porin complement(3994683..3997163) Yersinia pseudotuberculosis IP 32953 2954793 YP_071854.1 CDS smfA NC_006155.1 3997470 3998000 R similar to Yersinia pestis YPO4044 fimbrial protein (34.2% evalue=3.E-19); fimbrial protein complement(3997470..3998000) Yersinia pseudotuberculosis IP 32953 2956614 YP_071855.1 CDS chiC NC_006155.1 3999120 4000535 D similar to Pseudomonas aeruginosa PA2300 chiC; chitinase (51.7% evalue=1.E-131); Lactococcus lactis L9964 chiA; chitinase (46.2% evalue=1.E-101); chitinase 3999120..4000535 Yersinia pseudotuberculosis IP 32953 2955331 YP_071856.1 CDS YPTB3366 NC_006155.1 4000604 4002013 D similar to Listeria monocytogenes lmo2467 similar to chitinase and chitin binding protein (32.8% evalue=3.E-54); Listeria innocua lin2611 similar to chitinase and chitin binding protein (33.4% evalue=5.E-50); hypothetical protein 4000604..4002013 Yersinia pseudotuberculosis IP 32953 2954794 YP_071857.1 CDS YPTB3368 NC_006155.1 4003499 4004086 D similar to Salmonella typhi STY0374 possible transmembrane regulator (32% evalue=1.E-10); Salmonella typhimurium STM0341 inner membrane protein (32% evalue=3.E-11); hypothetical protein 4003499..4004086 Yersinia pseudotuberculosis IP 32953 2954796 YP_071858.1 CDS YPTB3369 NC_006155.1 4004309 4004506 D hypothetical protein 4004309..4004506 Yersinia pseudotuberculosis IP 32953 2954797 YP_071859.1 CDS YPTB3370 NC_006155.1 4004573 4004995 D similar to Yersinia pestis YPO0695 membrane protein (94.2% evalue=3.E-68); Pasteurella multocida PM0854 hypothetical A. actinmycetemcomitans (34.5% evalue=1.E-22); hypothetical protein 4004573..4004995 Yersinia pseudotuberculosis IP 32953 2954798 YP_071860.1 CDS YPTB3371 NC_006155.1 4005047 4005943 D similar to Yersinia pestis YPO0694 membrane protein (92.9% evalue=1.E-152); Pasteurella multocida PM0853 hypothetical A. actinmycetemcomitans (27.1% evalue=2.E-19); hypothetical protein 4005047..4005943 Yersinia pseudotuberculosis IP 32953 2954799 YP_071861.1 CDS rcpA NC_006155.1 4005940 4007259 D similar to Pasteurella multocida PM0852 rcpA; rough colony protein A (39.6% evalue=8.E-92); Mesorhizobium loti mlr6335 type II secretion system protein (29.4% evalue=2.E-43); outer membrane secretin family protein 4005940..4007259 Yersinia pseudotuberculosis IP 32953 2956404 YP_071862.1 CDS YPTB3373 NC_006155.1 4007256 4007546 D not considered as relevant in Y.pestis C0-92 annotation.; hypothetical protein 4007256..4007546 Yersinia pseudotuberculosis IP 32953 2954800 YP_071863.1 CDS YPTB3374 NC_006155.1 4007557 4008684 D similar to Yersinia pestis YPO0691 hypothetical protein (100% evalue=0); Pasteurella multocida PM0850 unknown (35.2% evalue=2.E-58); hypothetical protein 4007557..4008684 Yersinia pseudotuberculosis IP 32953 2954801 YP_071864.1 CDS YPTB3375 NC_006155.1 4008696 4009982 D similar to Yersinia pestis YPO0690 type II secretion protein (99.5% evalue=0); Pasteurella multocida PM0849 tadA; TadA, nonspecific tight adherence protein (63.2% evalue=1.E-152); type IV secretion ATPase 4008696..4009982 Yersinia pseudotuberculosis IP 32953 2954802 YP_071865.1 CDS YPTB3376 NC_006155.1 4009979 4010854 D similar to Yersinia pestis YPO0689 membrane protein (100% evalue=1.E-162); Pasteurella multocida PM0848 tadB; TadB, nonspecific tight adherence protein (35.5% evalue=8.E-49); hypothetical protein 4009979..4010854 Yersinia pseudotuberculosis IP 32953 2954803 YP_071866.1 CDS YPTB3377 NC_006155.1 4010851 4011684 D similar to Yersinia pestis YPO0688 exported protein (99.6% evalue=1.E-148); Pasteurella multocida PM0847 tadC; TadC, nonspecific tight adherence protein (30.9% evalue=4.E-38); hypothetical protein 4010851..4011684 Yersinia pseudotuberculosis IP 32953 2954804 YP_071867.1 CDS YPTB3378 NC_006155.1 4011668 4012438 D similar to Yersinia pestis YPO0687 conserved hypothetical protein (99.1% evalue=1.E-131); Pasteurella multocida PM0846 tadD; TadD, nonspecific tight adherence protein (40.3% evalue=4.E-44); hypothetical protein 4011668..4012438 Yersinia pseudotuberculosis IP 32953 2954805 YP_071868.1 CDS YPTB3379 NC_006155.1 4012435 4012908 D similar to Yersinia pestis YPO0686 membrane protein (99.3% evalue=8.E-83); hypothetical protein 4012435..4012908 Yersinia pseudotuberculosis IP 32953 2954806 YP_071869.1 CDS YPTB3380 NC_006155.1 4012892 4013464 D similar to Yersinia pestis YPO0685 conserved hypothetical protein (99.4% evalue=5.E-91); Pasteurella multocida PM0844 tadF; TadF, nonspecific tight adherence protein (28.6% evalue=1.E-13); hypothetical protein 4012892..4013464 Yersinia pseudotuberculosis IP 32953 2954807 YP_071870.1 CDS YPTB3381 NC_006155.1 4013489 4015045 D similar to Yersinia pestis YPO0684 membrane protein (99.6% evalue=0); Pasteurella multocida PM0843 tadG; TadG, nonspecific tight adherence protein (22.8% evalue=6.E-19); hypothetical protein 4013489..4015045 Yersinia pseudotuberculosis IP 32953 2954808 YP_071871.1 CDS YPTB3382 NC_006155.1 4015142 4015567 R membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD complement(4015142..4015567) Yersinia pseudotuberculosis IP 32953 2954809 YP_071872.1 CDS YPTB3383 NC_006155.1 4015577 4016614 R similar to Yersinia pestis YPO0682 MotA/TolQ/ExbB proton channel family protein (99.5% evalue=1.E-127); Escherichia coli Z4359 exbB; uptake of enterochelin; tonB-dependent uptake of B colicins (71.1% evalue=3.E-88); MotA/TolQ/ExbB proton channel family protein complement(4015577..4016614) Yersinia pseudotuberculosis IP 32953 2954810 YP_071873.1 CDS metC NC_006155.1 4017093 4018304 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4017093..4018304 Yersinia pseudotuberculosis IP 32953 2956022 YP_071874.1 CDS YPTB3385 NC_006155.1 4018497 4019159 D similar to Yersinia pestis YPO0680 DedA-family membrane protein (100% evalue=1.E-122); Escherichia coli ECs3893 hypothetical protein (70.2% evalue=5.E-83); DedA family membrane protein 4018497..4019159 Yersinia pseudotuberculosis IP 32953 2954811 YP_071875.1 CDS YPTB3386 NC_006155.1 4019251 4020144 R similar to Yersinia pestis YPO0679 AraC-family regulatory protein (100% evalue=1.E-168); Salmonella typhimurium STM3163 yqhC; transcriptional regulator (AraC/XylS family) (61.5% evalue=1.E-101); AraC family transcriptional regulator complement(4019251..4020144) Yersinia pseudotuberculosis IP 32953 2954812 YP_071876.1 CDS YPTB3387 NC_006155.1 4020542 4021699 D similar to Yersinia pestis YPO0678 iron-containing alcohol dehydrogenase (100% evalue=0); Escherichia coli b3011 yqhD; hypothetical oxidoreductase in metC-sufI intergenic region (77.2% evalue=1.E-172); iron-containing alcohol dehydrogenase 4020542..4021699 Yersinia pseudotuberculosis IP 32953 2954813 YP_071877.1 CDS dkgA NC_006155.1 4022118 4022951 D methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4022118..4022951 Yersinia pseudotuberculosis IP 32953 2954814 YP_071878.1 CDS YPTB3389 NC_006155.1 4022973 4025336 R similar to Escherichia coli ECs3900 hypothetical protein (82.8% evalue=0); Escherichia coli Z4370 hypothetical protein (82.7% evalue=0); hypothetical protein complement(4022973..4025336) Yersinia pseudotuberculosis IP 32953 2954815 YP_071879.1 CDS sufI NC_006155.1 4025644 4027068 R similar to Yersinia pestis YPO0673 sufI; cell division protein (100% evalue=0); Escherichia coli ECs3901 suppressor of ftsI (74.3% evalue=0); repressor protein for FtsI complement(4025644..4027068) Yersinia pseudotuberculosis IP 32953 2956649 YP_071880.1 CDS plsC NC_006155.1 4027247 4027978 R similar to Yersinia pestis YPO0672 plsC, parF; acyltransferase (100% evalue=1.E-139); Escherichia coli ECs3902 1-acyl-sn-glycerol-3-phosphate acyltransferase (72.1% evalue=1.E-101); acyltransferase complement(4027247..4027978) Yersinia pseudotuberculosis IP 32953 2956278 YP_071881.1 CDS parC NC_006155.1 4028249 4030522 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(4028249..4030522) Yersinia pseudotuberculosis IP 32953 2956212 YP_071882.1 CDS mdaB NC_006155.1 4030826 4031410 D similar to Yersinia pestis YPO0670 mdaB, mda66; modulator of drug activity (100% evalue=1.E-113); Salmonella typhimurium STM3179 mdaB; NADPH specific quinone oxidoreductase (drug modulator) (69.4% evalue=1.E-78); modulator of drug activity 4030826..4031410 Yersinia pseudotuberculosis IP 32953 2956004 YP_071883.1 CDS YPTB3394 NC_006155.1 4031468 4032379 R similar to Yersinia pestis YPO0669 crgA; LysR-family regulatory protein (99.6% evalue=1.E-166); Ralstonia solanacearum RS04599 probable transcription regulator protein (66.5% evalue=1.E-101); LysR family transcriptional regulator complement(4031468..4032379) Yersinia pseudotuberculosis IP 32953 2954816 YP_071884.1 CDS parE NC_006155.1 4032383 4034278 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(4032383..4034278) Yersinia pseudotuberculosis IP 32953 2956213 YP_071885.1 CDS YPTB3396 NC_006155.1 4034380 4034961 R Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase complement(4034380..4034961) Yersinia pseudotuberculosis IP 32953 2954817 YP_071886.1 CDS icc NC_006155.1 4034961 4035860 R similar to Yersinia pestis YPO0666 icc; Icc protein homologue (98.9% evalue=1.E-163); Salmonella typhi STY3361 icc; conserved hypothetical protein (71.6% evalue=1.E-116); cyclic 3',5'-adenosine monophosphate phosphodiesterase complement(4034961..4035860) Yersinia pseudotuberculosis IP 32953 2955862 YP_071887.1 CDS YPTB3398 NC_006155.1 4035869 4036294 R similar to Yersinia pestis YPO0665 conserved hypothetical protein (100% evalue=3.E-78); Escherichia coli JW3001 yqiB; Hypothetical protein (ORF2) (f140) (79.7% evalue=6.E-63); hypothetical protein complement(4035869..4036294) Yersinia pseudotuberculosis IP 32953 2954818 YP_071888.1 CDS nudF NC_006155.1 4036328 4036960 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase complement(4036328..4036960) Yersinia pseudotuberculosis IP 32953 2954819 YP_071889.1 CDS tolC NC_006155.1 4037356 4038750 D trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4037356..4038750 Yersinia pseudotuberculosis IP 32953 2955769 YP_071890.1 CDS YPTB3401 NC_006155.1 4039051 4039737 D similar to Yersinia pestis YPO0661 exported protein (100% evalue=1.E-127); Salmonella typhimurium STM3187 ygiB; inner membrane protein (75.2% evalue=1.E-92); hypothetical protein 4039051..4039737 Yersinia pseudotuberculosis IP 32953 2954820 YP_071891.1 CDS YPTB3402 NC_006155.1 4039747 4040907 D similar to Yersinia pestis YPO0660 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM3188 ygiC; glutathionylspermidine synthase (78.4% evalue=0); hypothetical protein 4039747..4040907 Yersinia pseudotuberculosis IP 32953 2954821 YP_071892.1 CDS YPTB3403 NC_006155.1 4041068 4041850 R seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein complement(4041068..4041850) Yersinia pseudotuberculosis IP 32953 2954822 YP_071893.1 CDS ribB NC_006155.1 4042309 4042962 R DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(4042309..4042962) Yersinia pseudotuberculosis IP 32953 2956451 YP_071894.1 CDS YPTB3405 NC_006155.1 4043532 4043813 D similar to Yersinia pestis YPO0656 conserved hypothetical protein (100% evalue=4.E-46); Escherichia coli Z4400 hypothetical protein (89% evalue=2.E-33); hypothetical protein 4043532..4043813 Yersinia pseudotuberculosis IP 32953 2954823 YP_071895.1 CDS asoB NC_006155.1 4044138 4045388 R uncharacterized member of the APC superfamily of amino acid transporters; unknown function; hypothetical protein complement(4044138..4045388) Yersinia pseudotuberculosis IP 32953 2955246 YP_071896.1 CDS rfaE NC_006155.1 4045425 4046855 R catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(4045425..4046855) Yersinia pseudotuberculosis IP 32953 2956428 YP_071897.1 CDS glnE NC_006155.1 4046990 4049845 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(4046990..4049845) Yersinia pseudotuberculosis IP 32953 2955698 YP_071898.1 CDS YPTB3409 NC_006155.1 4049993 4051300 R similar to Yersinia pestis YPO0652 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY3381 conserved hypothetical protein (49.8% evalue=1.E-115); hypothetical protein complement(4049993..4051300) Yersinia pseudotuberculosis IP 32953 2954824 YP_071899.1 CDS YPTB3410 NC_006155.1 4051604 4052224 D similar to Yersinia pestis YPO0651 exported protein (99.5% evalue=1.E-114); Escherichia coli ECs3938 hypothetical protein (71.8% evalue=8.E-83); signal transduction protein 4051604..4052224 Yersinia pseudotuberculosis IP 32953 2954825 YP_071900.1 CDS cca NC_006155.1 4052402 4053640 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 4052402..4053640 Yersinia pseudotuberculosis IP 32953 2955305 YP_071901.1 CDS uppP NC_006155.1 4053876 4054694 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(4053876..4054694) Yersinia pseudotuberculosis IP 32953 2955268 YP_071902.1 CDS folB NC_006155.1 4054968 4055327 R catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase complement(4054968..4055327) Yersinia pseudotuberculosis IP 32953 2955631 YP_071903.1 CDS YPTB3414 NC_006155.1 4055435 4056085 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 4055435..4056085 Yersinia pseudotuberculosis IP 32953 2954826 YP_071904.1 CDS gcp NC_006155.1 4056331 4057344 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(4056331..4057344) Yersinia pseudotuberculosis IP 32953 2955677 YP_071905.1 CDS rpsU NC_006155.1 4057757 4057972 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4057757..4057972 Yersinia pseudotuberculosis IP 32953 2956548 YP_071906.1 CDS dnaG NC_006155.1 4058108 4059856 D synthesizes RNA primers at the replication forks; DNA primase 4058108..4059856 Yersinia pseudotuberculosis IP 32953 2955473 YP_071907.1 CDS rpoD NC_006155.1 4060014 4061852 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 4060014..4061852 Yersinia pseudotuberculosis IP 32953 2956523 YP_071908.1 CDS YPTB3419 NC_006155.1 4062370 4062972 R similar to Yersinia pestis YPO0642 hypothetical protein (97.4% evalue=4.E-16); hypothetical protein complement(4062370..4062972) Yersinia pseudotuberculosis IP 32953 2954827 YP_071909.1 CDS YPTB3420 NC_006155.1 4062989 4063444 R similar to Yersinia pestis YPO0641 hypothetical protein (100% evalue=3.E-78); hypothetical protein complement(4062989..4063444) Yersinia pseudotuberculosis IP 32953 2954828 YP_071910.1 CDS YPTB3421 NC_006155.1 4063471 4063941 R similar to Yersinia pestis YPO0641 hypothetical protein (49.2% evalue=9.E-30); hypothetical protein complement(4063471..4063941) Yersinia pseudotuberculosis IP 32953 2954829 YP_071911.1 CDS YPTB3422 NC_006155.1 4063950 4065326 R similar to Yersinia pestis YPO1258 conserved hypothetical protein (52.5% evalue=1.E-113); hypothetical protein complement(4063950..4065326) Yersinia pseudotuberculosis IP 32953 2954830 YP_071912.1 CDS YPTB3424 NC_006155.1 4067382 4068338 R similar to Yersinia pestis YPO0631 LysR-family regulatory protein (99% evalue=1.E-178); Pseudomonas aeruginosa PA4174 probable transcriptional regulator (42.6% evalue=2.E-63); LysR family transcriptional regulator complement(4067382..4068338) Yersinia pseudotuberculosis IP 32953 2954831 YP_071913.1 CDS YPTB3425 NC_006155.1 4068500 4069216 D similar to Yersinia pestis YPO0630 conserved hypothetical protein (99.5% evalue=1.E-139); Pseudomonas aeruginosa PA0859 hypothetical protein (36.5% evalue=5.E-29); hypothetical protein 4068500..4069216 Yersinia pseudotuberculosis IP 32953 2954832 YP_071914.1 CDS YPTB3426 NC_006155.1 4069476 4069778 D similar to Yersinia pestis YPO0629 conserved hypothetical protein (100% evalue=2.E-53); Escherichia coli JW1657 hypothetical protein (50% evalue=2.E-24); hypothetical protein 4069476..4069778 Yersinia pseudotuberculosis IP 32953 2954833 YP_071915.1 CDS YPTB3427 NC_006155.1 4069993 4070397 R similar to Yersinia pestis YPO0628 translational inhibitor protein (100% evalue=8.E-72); Sinorhizobium meliloti SMc01714 hypothetical transmembrane protein (33% evalue=2.E-12); translational inhibitor protein complement(4069993..4070397) Yersinia pseudotuberculosis IP 32953 2954834 YP_071916.1 CDS YPTB3428 NC_006155.1 4070682 4071062 R similar to Yersinia pestis YPO0627 translational inhibitor protein (100% evalue=8.E-66); P. horikoshii PH0854 hypothetical protein (52.4% evalue=9.E-31); translational inhibitor protein complement(4070682..4071062) Yersinia pseudotuberculosis IP 32953 2954835 YP_071917.1 CDS YPTB3429 NC_006155.1 4071073 4071705 R similar to Yersinia pestis YPO0626 conserved hypothetical protein (99.4% evalue=2.E-96); Salmonella typhi STY4219 DNA-binding protein (33.9% evalue=2.E-28); hypothetical protein complement(4071073..4071705) Yersinia pseudotuberculosis IP 32953 2954836 YP_071918.1 CDS YPTB3430 NC_006155.1 4071839 4072285 R similar to Yersinia pestis YPO0625 hypothetical protein (100% evalue=2.E-81); Mesorhizobium loti mlr1698 unknown protein (31.9% evalue=1.E-14); hypothetical protein complement(4071839..4072285) Yersinia pseudotuberculosis IP 32953 2954837 YP_071919.1 CDS YPTB3431 NC_006155.1 4072289 4073740 R similar to Yersinia pestis YPO0624 membrane protein (99.7% evalue=0); Halobacterium VNG0436G nhaC1; Na+/H+ antiporter (26.5% evalue=2.E-41); NhaC family Na+/H+ antiporter complement(4072289..4073740) Yersinia pseudotuberculosis IP 32953 2954838 YP_071920.1 CDS YPTB3432 NC_006155.1 4073733 4074965 R similar to Yersinia pestis YPO0623 aminotransferase (100% evalue=0); P. abyssi PAB0525 aspC; aspartate aminotransferase (33% evalue=9.E-55); aminotransferase complement(4073733..4074965) Yersinia pseudotuberculosis IP 32953 2954839 YP_071921.1 CDS YPTB3433 NC_006155.1 4075436 4075543 D similar to Yersinia pestis YPO0622 hypothetical protein, 100% identical.; hypothetical protein 4075436..4075543 Yersinia pseudotuberculosis IP 32953 2954840 YP_071922.1 CDS YPTB3434 NC_006155.1 4075716 4075916 D similar to Yersinia pestis YPO0621 hypothetical protein, 100% identical.; hypothetical protein 4075716..4075916 Yersinia pseudotuberculosis IP 32953 2954841 YP_071923.1 CDS YPTB3435 NC_006155.1 4075913 4076248 D similar to Yersinia pestis YPO0620 exported protein (100% evalue=7.E-58); hypothetical protein 4075913..4076248 Yersinia pseudotuberculosis IP 32953 2954842 YP_071924.1 CDS YPTB3436 NC_006155.1 4076258 4077307 D with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN 4076258..4077307 Yersinia pseudotuberculosis IP 32953 2954843 YP_071925.1 CDS YPTB3437 NC_006155.1 4077291 4079192 D similar to Yersinia pestis YPO0618 membrane protein (99.4% evalue=0); Escherichia coli JW4042 yjcQ; Hypothetical protein (27.9% evalue=5.E-45); PET family efflux transporter 4077291..4079192 Yersinia pseudotuberculosis IP 32953 2954844 YP_071926.1 CDS YPTB3438 NC_006155.1 4079197 4080723 D similar to Yersinia pestis YPO0617 membrane protein (100% evalue=0); Ralstonia solanacearum RS03674 outer membrane chanel lipoprotein (24.1% evalue=2.E-27); Outer membrane factor (OMF) family efflux porin 4079197..4080723 Yersinia pseudotuberculosis IP 32953 2954845 YP_071927.1 CDS YPTB3439 NC_006155.1 4080787 4082970 R similar to Yersinia pestis YPO0616 glycosyl hydrolase (99.7% evalue=0); Pseudomonas aeruginosa PA1726 bglX; periplasmic beta-glucosidase (39.3% evalue=1.E-140); glycosyl hydrolase complement(4080787..4082970) Yersinia pseudotuberculosis IP 32953 2954846 YP_071928.1 CDS YPTB3440 NC_006155.1 4083021 4083536 R similar to Yersinia pestis YPO0615 exported protein (98.1% evalue=2.E-86); hypothetical protein complement(4083021..4083536) Yersinia pseudotuberculosis IP 32953 2954847 YP_071929.1 CDS YPTB3441 NC_006155.1 4083533 4084351 R similar to Yersinia pestis YPO0614 permease (99.6% evalue=1.E-151); Agrobacterium tumefaciens AGR_L_3392 transport system inner membrane protein (37.2% evalue=1.E-49); sugar ABC transporter permease complement(4083533..4084351) Yersinia pseudotuberculosis IP 32953 2954848 YP_071930.1 CDS YPTB3442 NC_006155.1 4084351 4085232 R similar to Yersinia pestis YPO0613 permease (99.3% evalue=1.E-167); B. halodurans BH0902 araP; L-arabinose transport system permease (34.8% evalue=9.E-42); sugar ABC transporter permease complement(4084351..4085232) Yersinia pseudotuberculosis IP 32953 2954849 YP_071931.1 CDS YPTB3443 NC_006155.1 4085286 4086530 R similar to Yersinia pestis YPO0612 sugar binding protein (99.7% evalue=0); Mesorhizobium loti mll0854 probable secreted solute-binding protein (24.4% evalue=4.E-13); sugar ABC transporter substrate-binding protein complement(4085286..4086530) Yersinia pseudotuberculosis IP 32953 2954850 YP_071932.1 CDS YPTB3444 NC_006155.1 4086607 4087593 R similar to Yersinia pestis YPO0611 LacI-family regulatory protein (99% evalue=0); Listeria innocua lin1838 similar to transcription regulators (LacI family) (38.3% evalue=4.E-53); LacI-family regulatory protein complement(4086607..4087593) Yersinia pseudotuberculosis IP 32953 2954851 YP_071933.1 CDS YPTB3445 NC_006155.1 4087702 4091055 R similar to Yersinia pestis YPO0610 hypothetical protein (99.7% evalue=0); Listeria innocua lin1839 some similarities to cellobiose-phosphorylase (37.2% evalue=0); hypothetical protein complement(4087702..4091055) Yersinia pseudotuberculosis IP 32953 2954852 YP_071934.1 CDS YPTB3446 NC_006155.1 4091138 4092241 R similar to Yersinia pestis YPO1720 sugar ABC transporter (53.9% evalue=1.E-111); sugar ABC transporter ATP-binding protein complement(4091138..4092241) Yersinia pseudotuberculosis IP 32953 2954853 YP_071935.1 CDS YPTB3447 NC_006155.1 4092579 4093958 D similar to Yersinia pestis YPO0608 membrane protein (99.7% evalue=0); hypothetical protein 4092579..4093958 Yersinia pseudotuberculosis IP 32953 2954854 YP_071936.1 CDS YPTB3448 NC_006155.1 4094060 4095055 D similar to Yersinia pestis YPO0607 exported protein (99.6% evalue=0); hypothetical protein 4094060..4095055 Yersinia pseudotuberculosis IP 32953 2954855 YP_071937.1 CDS yapF NC_006155.1 4095115 4097400 D similar to Yersinia pestis YPO0606 yapF; autotransporter protein (99% evalue=0); Ralstonia solanacearum RS04855 probable hemagglutinin-related protein (22.6% evalue=7.E-10); autotransporter protein 4095115..4097400 Yersinia pseudotuberculosis IP 32953 2956950 YP_071938.1 CDS YPTB3451 NC_006155.1 4098135 4098386 R hypothetical protein complement(4098135..4098386) Yersinia pseudotuberculosis IP 32953 2954857 YP_071939.1 CDS YPTB3452 NC_006155.1 4098388 4098705 R similar to hypothetical protein [Neisseria meningitidis Z2491] pir||B81783, E() =4.00e-03, 40% identity. CDS not found in Y.pestis CO-92.; hypothetical protein complement(4098388..4098705) Yersinia pseudotuberculosis IP 32953 2954858 YP_071940.1 CDS YPTB3453 NC_006155.1 4098990 4099343 R hypothetical protein complement(4098990..4099343) Yersinia pseudotuberculosis IP 32953 2954859 YP_071941.1 CDS YPTB3455 NC_006155.1 4101394 4101894 R similar to Neisseria meningitidis NMB1489 hypothetical protein (50.2% evalue=4.E-41); Neisseria meningitidis NMB0488 hypothetical protein (52% evalue=1.E-42); hypothetical protein complement(4101394..4101894) Yersinia pseudotuberculosis IP 32953 2954861 YP_071942.1 CDS YPTB3458 NC_006155.1 4108387 4108776 R hypothetical protein complement(4108387..4108776) Yersinia pseudotuberculosis IP 32953 2954864 YP_071943.1 CDS YPTB3460 NC_006155.1 4109942 4120078 R similar to Yersinia pestis YPO2490 hemolysin (63% evalue=0); adhesin complement(4109942..4120078) Yersinia pseudotuberculosis IP 32953 2954866 YP_071944.1 CDS YPTB3461 NC_006155.1 4120123 4121811 R similar to Yersinia pestis YPO2491 hemolysin activator protein (81.6% evalue=0); hemolysin activator/exporter complement(4120123..4121811) Yersinia pseudotuberculosis IP 32953 2954867 YP_071945.1 CDS terY NC_006155.1 4122526 4123164 D similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (100% evalue=1.E-116); tellurium resistance protein 4122526..4123164 Yersinia pseudotuberculosis IP 32953 2956682 YP_071946.1 CDS terX NC_006155.1 4123197 4123838 D similar to Yersinia pestis YPO0596 terX; tellurium resistance protein (100% evalue=1.E-121); tellurium resistance protein 4123197..4123838 Yersinia pseudotuberculosis IP 32953 2956681 YP_071947.1 CDS YPTB3464 NC_006155.1 4123777 4124478 D similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (47.2% evalue=3.E-52); TerY-like tellurite resistance protein 4123777..4124478 Yersinia pseudotuberculosis IP 32953 2954868 YP_071948.1 CDS YPTB3465 NC_006155.1 4124580 4125620 D similar to Yersinia pestis YPO0597 terY; tellurium resistance protein (40% evalue=4.E-37); hypothetical protein 4124580..4125620 Yersinia pseudotuberculosis IP 32953 2954869 YP_071949.1 CDS YPTB3466 NC_006155.1 4125620 4127368 D similar to Yersinia pestis YPO0593 hypothetical protein (96.5% evalue=0); hypothetical protein 4125620..4127368 Yersinia pseudotuberculosis IP 32953 2954870 YP_071950.1 CDS YPTB3467 NC_006155.1 4127400 4128899 D similar to Yersinia pestis YPO0592 kinase (99.7% evalue=0); kinase 4127400..4128899 Yersinia pseudotuberculosis IP 32953 2954871 YP_071951.1 CDS YPTB3468 NC_006155.1 4129290 4129859 D similar to Yersinia pestis YPO0590 hdeD; membrane protein (100% evalue=3.E-99); Escherichia coli b3511 hdeD; hdeD protein (46.2% evalue=1.E-45); acid-resistance membrane protein 4129290..4129859 Yersinia pseudotuberculosis IP 32953 2954872 YP_071952.1 CDS fadH NC_006155.1 4130072 4132093 D similar to Yersinia pestis YPO0589 fadH, fadH1; 2,4-dienoyl-CoA reductase (99.7% evalue=0); Escherichia coli b3081 fadH; 2,4-dienoyl-CoA reductase (NADPH) (2,4-dienoyl coenzyme A reductase) (72.7% evalue=0); 2,4-dienoyl-CoA reductase 4130072..4132093 Yersinia pseudotuberculosis IP 32953 2955525 YP_071953.1 CDS YPTB3470 NC_006155.1 4132209 4133396 R similar to Yersinia pestis YPO0588 ribosomal RNA small subunit methyltransferase D (100% evalue=0); Escherichia coli ECs3966 ribosomal RNA small subunit methyltransferase D (63.3% evalue=1.E-139); methyltransferase complement(4132209..4133396) Yersinia pseudotuberculosis IP 32953 2954873 YP_071954.1 CDS YapG NC_006155.1 4133871 4136864 D similar to Yersinia pestis YPO1004 yapH; autotransporter protein (43.3% evalue=1.E-79); pertactin family virulence factor/autotransporter 4133871..4136864 Yersinia pseudotuberculosis IP 32953 2956951 YP_071955.1 CDS YPTB3472 NC_006155.1 4137120 4137629 D similar to Yersinia pestis YPO0586 conserved hypothetical protein (100% evalue=4.E-96); Salmonella typhimurium STM3221 ygjP; metal-dependent hydrolase (80.5% evalue=4.E-72); hypothetical protein 4137120..4137629 Yersinia pseudotuberculosis IP 32953 2954874 YP_071956.1 CDS YPTB3473 NC_006155.1 4137847 4138842 D similar to Yersinia pestis YPO0585 MocA-family oxidoreductase (100% evalue=0); Escherichia coli ECs3969 hypothetical protein (74.1% evalue=1.E-135); MocA family oxidoreductase 4137847..4138842 Yersinia pseudotuberculosis IP 32953 2954875 YP_071957.1 CDS YPTB3474 NC_006155.1 4139377 4140633 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 4139377..4140633 Yersinia pseudotuberculosis IP 32953 2954876 YP_071958.1 CDS YPTB3475 NC_006155.1 4140700 4141230 R similar to Yersinia pestis YPO0582 membrane protein (100% evalue=7.E-97); Escherichia coli Z4443 ygjV; orf, hypothetical protein (66% evalue=1.E-66); hypothetical protein complement(4140700..4141230) Yersinia pseudotuberculosis IP 32953 2954877 YP_071959.1 CDS uxaA NC_006155.1 4141383 4142873 R similar to Yersinia pestis YPO0581 uxaA; altronate hydrolase (99.1% evalue=0); Escherichia coli Z4444 uxaA; altronate hydrolase (79% evalue=0); altronate hydrolase complement(4141383..4142873) Yersinia pseudotuberculosis IP 32953 2956886 YP_071960.1 CDS uxaB NC_006155.1 4142884 4144335 R catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase complement(4142884..4144335) Yersinia pseudotuberculosis IP 32953 2956887 YP_071961.1 CDS uxaC NC_006155.1 4144534 4145943 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(4144534..4145943) Yersinia pseudotuberculosis IP 32953 2956888 YP_071962.1 CDS exuT NC_006155.1 4146689 4147993 D similar to Yersinia pestis YPO0577 exuT; ExuT transport protein (100% evalue=0); Escherichia coli JW3064 exuT; Hexuronate transporter (84.1% evalue=0); major facilitator superfamily transporter 4146689..4147993 Yersinia pseudotuberculosis IP 32953 2955512 YP_071963.1 CDS exuR NC_006155.1 4148256 4149050 D regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 4148256..4149050 Yersinia pseudotuberculosis IP 32953 2955511 YP_071964.1 CDS YPTB3481 NC_006155.1 4149251 4149832 D similar to Yersinia pestis YPO0575 lipoprotein (98.9% evalue=1.E-102); lipoprotein 4149251..4149832 Yersinia pseudotuberculosis IP 32953 2954878 YP_071965.1 CDS yqjA NC_006155.1 4150110 4150808 D similar to Yersinia pestis YPO0574 yqjA; DedA-family membrane protein (100% evalue=1.E-132); Escherichia coli JW3066 yqjA; Hypothetical protein (78.6% evalue=1.E-100); DedA family membrane protein 4150110..4150808 Yersinia pseudotuberculosis IP 32953 2957113 YP_071966.1 CDS YPTB3483 NC_006155.1 4150805 4151194 D similar to Yersinia pestis YPO0573 membrane protein (99.2% evalue=2.E-68); Salmonella typhimurium STM3227 yqjB; outer membrane protein (43.3% evalue=4.E-15); hypothetical protein 4150805..4151194 Yersinia pseudotuberculosis IP 32953 2954879 YP_071967.1 CDS YPTB3484 NC_006155.1 4151420 4151800 D similar to Yersinia pestis YPO0572 exported protein (100% evalue=6.E-66); Salmonella typhimurium STM3228 yqjC; periplasmic protein (44% evalue=1.E-23); hypothetical protein 4151420..4151800 Yersinia pseudotuberculosis IP 32953 2954880 YP_071968.1 CDS YPTB3485 NC_006155.1 4151955 4152260 D similar to Yersinia pestis YPO0570 yqjD; membrane protein (100% evalue=1.E-50); Escherichia coli JW3069 yqjD; Hypothetical protein (69.3% evalue=5.E-33); membrane associated protein 4151955..4152260 Yersinia pseudotuberculosis IP 32953 2954881 YP_071969.1 CDS YPTB3486 NC_006155.1 4152263 4152658 D similar to Yersinia pestis YPO0569a conserved hypothetical protein (100% evalue=3.E-66); Salmonella typhimurium STM3230 yqjE; inner membrane protein (64.6% evalue=6.E-40); hypothetical protein 4152263..4152658 Yersinia pseudotuberculosis IP 32953 2954882 YP_071970.1 CDS YPTB3487 NC_006155.1 4152655 4152939 D similar to Yersinia pestis YPO0569 conserved hypothetical protein (97.8% evalue=4.E-47); Salmonella typhi STY3411 conserved hypothetical protein (39.3% evalue=4.E-17); hypothetical protein 4152655..4152939 Yersinia pseudotuberculosis IP 32953 2954883 YP_071971.1 CDS YPTB3488 NC_006155.1 4153243 4153638 D similar to Yersinia pestis YPO0568 membrane protein (99.1% evalue=7.E-65); Escherichia coli b3101 yqjF; hypothetical 17.2 kD protein in exuR-tdcC intergenic region (75.5% evalue=4.E-53); hypothetical protein 4153243..4153638 Yersinia pseudotuberculosis IP 32953 2954884 YP_071972.1 CDS yqjG NC_006155.1 4153724 4154710 D similar to Escherichia coli b3102 yqjG; hypothetical 37.4 kD protein in exuR-tdcC intergenic region (O328) (77% evalue=1.E-151); Escherichia coli JW3073 yqjG; Hypothetical protein (o328) (77% evalue=1.E-151); glutathione S-transferase 4153724..4154710 Yersinia pseudotuberculosis IP 32953 2957114 YP_071973.1 CDS YPTB3490 NC_006155.1 4154841 4155734 R similar to Yersinia pestis YPO3545 lysR-family transcriptional regulatory protein (99.6% evalue=1.E-164); Escherichia coli b3105 yhaJ; hypothetical transcriptional regulator in exuR-tdcC intergenic region (89.1% evalue=1.E-146); LysR family transcriptional regulator complement(4154841..4155734) Yersinia pseudotuberculosis IP 32953 2954885 YP_071974.1 CDS YPTB3491 NC_006155.1 4155996 4156700 D similar to Yersinia pestis YPO3546 conserved hypothetical protein (99.1% evalue=1.E-133); Salmonella typhi STY3416 conserved hypothetical protein (71.7% evalue=7.E-92); hypothetical protein 4155996..4156700 Yersinia pseudotuberculosis IP 32953 2954886 YP_071975.1 CDS YPTB3492 NC_006155.1 4157524 4158423 R similar to Yersinia pestis YPO3547 tetrapyrrole methylase (100% evalue=1.E-167); Escherichia coli b3146 yraL; hypothetical 31.3 kD protein in agaI-mtr intergenic region (F286) (85.3% evalue=1.E-135); tetrapyrrole methylase family protein complement(4157524..4158423) Yersinia pseudotuberculosis IP 32953 2954887 YP_071976.1 CDS YPTB3493 NC_006155.1 4158486 4160459 D similar to Yersinia pestis YPO3548 exported protein (99.8% evalue=0); Salmonella typhimurium STM3264 yraM; paral transglycosylase (55.9% evalue=0); hypothetical protein 4158486..4160459 Yersinia pseudotuberculosis IP 32953 2954888 YP_071977.1 CDS YPTB3494 NC_006155.1 4160558 4160911 D similar to Yersinia pestis YPO3549 conserved hypothetical protein (100% evalue=2.E-63); Salmonella typhimurium STM3265 yraN; endonuclease (57.3% evalue=4.E-31); hypothetical protein 4160558..4160911 Yersinia pseudotuberculosis IP 32953 2954889 YP_071978.1 CDS YPTB3495 NC_006155.1 4161182 4161772 D Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; chromosome replication initiator DnaA 4161182..4161772 Yersinia pseudotuberculosis IP 32953 2954890 YP_071979.1 CDS YPTB3496 NC_006155.1 4161783 4162358 D similar to Yersinia pestis YPO3551 exported protein (99.4% evalue=2.E-99); Salmonella typhimurium STM3267 yraP; paral periplasmic protein (73.8% evalue=6.E-73); hypothetical protein 4161783..4162358 Yersinia pseudotuberculosis IP 32953 2954891 YP_071980.1 CDS mtgA NC_006155.1 4162565 4163290 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(4162565..4163290) Yersinia pseudotuberculosis IP 32953 2956088 YP_071981.1 CDS elbB NC_006155.1 4163287 4163940 R similar to Yersinia pestis YPO3553 elbB, elb2; enhancing lycopene biosynthesis protein 2 (100% evalue=1.E-119); Salmonella typhi STY3506 conserved hypothetical protein (65.8% evalue=6.E-79); isoprenoid biosynthesis protein complement(4163287..4163940) Yersinia pseudotuberculosis IP 32953 2955501 YP_071982.1 CDS YPTB3499 NC_006155.1 4163970 4164164 R similar to Yersinia pestis YPO3554 hypothetical protein, 97% identical; hypothetical protein complement(4163970..4164164) Yersinia pseudotuberculosis IP 32953 2954892 YP_071983.1 CDS arcB NC_006155.1 4164182 4166518 R sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB complement(4164182..4166518) Yersinia pseudotuberculosis IP 32953 2955211 YP_071984.1 CDS YPTB3501 NC_006155.1 4166802 4167725 R similar to Yersinia pestis YPO3556 conserved hypothetical protein (100% evalue=1.E-180); Escherichia coli ECs4090 hypothetical protein (78.7% evalue=1.E-140); hypothetical protein complement(4166802..4167725) Yersinia pseudotuberculosis IP 32953 2954893 YP_071985.2 CDS gltB NC_006155.1 4168548 4173005 D catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4168548..4173005 Yersinia pseudotuberculosis IP 32953 2955717 YP_071986.1 CDS gltD NC_006155.1 4173015 4174433 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4173015..4174433 Yersinia pseudotuberculosis IP 32953 2955718 YP_071987.1 CDS YPTB3504 NC_006155.1 4175033 4175518 D similar to Yersinia pestis YPO3559 exported protein (98.7% evalue=2.E-83); hypothetical protein 4175033..4175518 Yersinia pseudotuberculosis IP 32953 2954894 YP_071988.1 CDS sspB NC_006155.1 4175671 4176186 R similar to Yersinia pestis YPO3560 sspB; stringent starvation protein B (100% evalue=9.E-96); Escherichia coli ECs4101 stringent starvation protein B (72.5% evalue=1.E-67); ClpXP protease specificity-enhancing factor complement(4175671..4176186) Yersinia pseudotuberculosis IP 32953 2956636 YP_071989.1 CDS sspA NC_006155.1 4176192 4176833 R transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A complement(4176192..4176833) Yersinia pseudotuberculosis IP 32953 2956635 YP_071990.1 CDS rpsI NC_006155.1 4177207 4177599 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(4177207..4177599) Yersinia pseudotuberculosis IP 32953 2956538 YP_071991.1 CDS rplM NC_006155.1 4177614 4178042 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(4177614..4178042) Yersinia pseudotuberculosis IP 32953 2956497 YP_071992.1 CDS YPTB3509 NC_006155.1 4178356 4179483 R similar to Yersinia pestis YPO3564 conserved hypothetical protein (100% evalue=0); Salmonella typhi STY3526 ATP/GTP-binding protein (66.4% evalue=1.E-139); hypothetical protein complement(4178356..4179483) Yersinia pseudotuberculosis IP 32953 2954895 YP_071993.1 CDS YPTB3510 NC_006155.1 4179707 4180111 D similar to Yersinia pestis YPO3565 membrane protein (100% evalue=3.E-73); Salmonella typhimurium STM3347 yhcB; periplasmic protein (80.3% evalue=2.E-53); cytochrome d ubiquinol oxidase subunit III 4179707..4180111 Yersinia pseudotuberculosis IP 32953 2954896 YP_071994.1 CDS degQ NC_006155.1 4180382 4181755 D similar to Yersinia pestis YPO3566 degQ, hhoA; protease (100% evalue=0); Salmonella typhi STY3528 degQ; serine protease (72.9% evalue=0); protease 4180382..4181755 Yersinia pseudotuberculosis IP 32953 2955447 YP_071995.1 CDS degS NC_006155.1 4181845 4182933 D similar to Yersinia pestis YPO3568 degS, hhoB, htrH; protease (100% evalue=0); Escherichia coli b3235 degS, hhoB, htrH; protease degS precursor (71.2% evalue=1.E-136); serine endoprotease 4181845..4182933 Yersinia pseudotuberculosis IP 32953 2955448 YP_071996.1 CDS murA NC_006155.1 4183114 4184376 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4183114..4184376) Yersinia pseudotuberculosis IP 32953 2956098 YP_071997.1 CDS YPTB3514 NC_006155.1 4184530 4184793 R similar to Yersinia pestis YPO3570 BolA-like protein (98.8% evalue=4.E-44); Escherichia coli ECs4069 hypothetical protein (82.1% evalue=1.E-34); BolA/YrbA family protein complement(4184530..4184793) Yersinia pseudotuberculosis IP 32953 2954897 YP_071998.1 CDS YPTB3515 NC_006155.1 4184931 4185233 R similar to Yersinia pestis YPO3571 anti-sigma B factor antagonist (100% evalue=2.E-49); Escherichia coli ECs4070 hypothetical protein (43.3% evalue=4.E-17); anti-sigma B factor antagonist complement(4184931..4185233) Yersinia pseudotuberculosis IP 32953 2954898 YP_071999.1 CDS yrbC NC_006155.1 4185269 4185892 R similar to Yersinia pestis YPO3572 yrbC; exported protein (100% evalue=1.E-116); Salmonella typhimurium STM3310 yrbC; ABC superfamily (atp&memb), transport protein (77.5% evalue=9.E-92); hypothetical protein complement(4185269..4185892) Yersinia pseudotuberculosis IP 32953 2957115 YP_072000.1 CDS yrbD NC_006155.1 4185905 4186462 R similar to Yersinia pestis YPO3573 yrbD; membrane protein (99.4% evalue=1.E-101); Salmonella typhi STY3490 possible exported protein (67.5% evalue=3.E-68); hypothetical protein complement(4185905..4186462) Yersinia pseudotuberculosis IP 32953 2957116 YP_072001.1 CDS yrbE NC_006155.1 4186467 4187249 R similar to Yersinia pestis YPO3574 yrbE; membrane protein (100% evalue=1.E-142); Escherichia coli Z4557 yrbE; ABC transporter permease (82.6% evalue=1.E-122); toluene tolerance ABC transporter permease complement(4186467..4187249) Yersinia pseudotuberculosis IP 32953 2957117 YP_072002.1 CDS yrbF NC_006155.1 4187467 4188285 R ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein complement(4187467..4188285) Yersinia pseudotuberculosis IP 32953 2957118 YP_072003.1 CDS yrbG NC_006155.1 4188550 4189524 D YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 4188550..4189524 Yersinia pseudotuberculosis IP 32953 2957119 YP_072004.1 CDS YPTB3521 NC_006155.1 4189635 4190621 D similar to Yersinia pestis YPO3577 conserved hypothetical protein (100% evalue=0); Salmonella typhimurium STM3315 yrbH; polysialic acid capsule expression protein (78.6% evalue=1.E-147); D-arabinose 5-phosphate isomerase 4189635..4190621 Yersinia pseudotuberculosis IP 32953 2954899 YP_072005.1 CDS YPTB3522 NC_006155.1 4191027 4191590 D forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4191027..4191590 Yersinia pseudotuberculosis IP 32953 2954900 YP_072006.1 CDS yrbK NC_006155.1 4191587 4192150 D similar to Yersinia pestis YPO3579 yrbK; exported protein (99.4% evalue=1.E-102); Escherichia coli JW3166 yrbK; Hypothetical protein (o191) (56.4% evalue=3.E-58); hypothetical protein 4191587..4192150 Yersinia pseudotuberculosis IP 32953 2957120 YP_072007.1 CDS YPTB3524 NC_006155.1 4192134 4192679 D LptA; periplasmic binding protein part of a ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA 4192134..4192679 Yersinia pseudotuberculosis IP 32953 2954901 YP_072008.1 CDS yhbG NC_006155.1 4192686 4193411 D similar to Yersinia pestis YPO3581 yhbG; probable ABC transporter ATP-binding protein (100% evalue=1.E-131); Escherichia coli JW3168 yhbG; probable ABC transporter ATP-binding protein (88.7% evalue=1.E-117); ABC transporter ATP-binding protein 4192686..4193411 Yersinia pseudotuberculosis IP 32953 2957054 YP_072009.1 CDS rpoN NC_006155.1 4193473 4194906 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4193473..4194906 Yersinia pseudotuberculosis IP 32953 2956526 YP_072010.1 CDS yhbH NC_006155.1 4194930 4195217 D YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein 4194930..4195217 Yersinia pseudotuberculosis IP 32953 2957055 YP_072011.1 CDS ptsN NC_006155.1 4195336 4195818 D similar to Yersinia pestis YPO3585 ptsN, rpoP; nitrogen regulatory IIA protein (100% evalue=2.E-84); Escherichia coli Z4567 ptsN; phosphotransferase system enzyme IIA, regulates N metabolism (86.1% evalue=3.E-69); PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4195336..4195818 Yersinia pseudotuberculosis IP 32953 2956363 YP_072012.1 CDS YPTB3529 NC_006155.1 4196124 4196978 D similar to Yersinia pestis YPO3586 conserved hypothetical protein (100% evalue=1.E-161); Escherichia coli Z4568 yhbJ; orf, hypothetical protein (94.3% evalue=1.E-153); hypothetical protein 4196124..4196978 Yersinia pseudotuberculosis IP 32953 2954902 YP_072013.1 CDS ptsO NC_006155.1 4196975 4197247 D similar to Yersinia pestis YPO3587 ptsO, npr, rpoR; phosphocarrier protein (100% evalue=4.E-43); Salmonella typhi STY3503 ptsO; phosphocarrier protein (nitrogen related hpr) (85.5% evalue=1.E-37); PTS system phosphohistidinoprotein-hexose phosphotransferase Npr 4196975..4197247 Yersinia pseudotuberculosis IP 32953 2956364 YP_072014.1 CDS pyrB NC_006155.1 4197585 4198520 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 4197585..4198520 Yersinia pseudotuberculosis IP 32953 2956384 YP_072015.1 CDS pyrI NC_006155.1 4198529 4198996 D involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase 4198529..4198996 Yersinia pseudotuberculosis IP 32953 2956391 YP_072016.1 CDS YPTB3533 NC_006155.1 4199134 4199520 D similar to Yersinia pestis YPO3590 conserved hypothetical protein (93.7% evalue=1.E-61); Salmonella typhi STY4798 yjgF; conserved hypothetical protein (89% evalue=3.E-59); hypothetical protein 4199134..4199520 Yersinia pseudotuberculosis IP 32953 2954903 YP_072017.1 CDS YPTB3534 NC_006155.1 4199819 4200295 D similar to Yersinia pestis YPO3699 exported protein (100% evalue=4.E-87); hypothetical protein 4199819..4200295 Yersinia pseudotuberculosis IP 32953 2954904 YP_072018.1 CDS treR NC_006155.1 4200529 4201482 D regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor 4200529..4201482 Yersinia pseudotuberculosis IP 32953 2956730 YP_072019.1 CDS treB NC_006155.1 4201893 4203308 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC 4201893..4203308 Yersinia pseudotuberculosis IP 32953 2956728 YP_072020.1 CDS treC NC_006155.1 4203403 4205070 D similar to Yersinia pestis YPO3696 treC, olgH; trehalose-6-phosphate hydrolase (100% evalue=0); Salmonella typhi STY4793 treC; trehalose-6-phosphate hydrolase (73.1% evalue=0); trehalose-6-phosphate hydrolase 4203403..4205070 Yersinia pseudotuberculosis IP 32953 2956729 YP_072021.1 CDS rnk NC_006155.1 4205423 4205833 D Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4205423..4205833 Yersinia pseudotuberculosis IP 32953 2956472 YP_072022.1 CDS YPTB3539 NC_006155.1 4206077 4206463 R similar to Yersinia pestis YPO3694 cytochrome (100% evalue=6.E-66); Salmonella typhi STY4778 cybC; soluble cytochrome b562 (52.3% evalue=1.E-31); cytochrome complement(4206077..4206463) Yersinia pseudotuberculosis IP 32953 2954905 YP_072023.1 CDS pmbA NC_006155.1 4207439 4208779 R protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA complement(4207439..4208779) Yersinia pseudotuberculosis IP 32953 2956280 YP_072024.1 CDS YPTB3542 NC_006155.1 4208960 4209508 D similar to Yersinia pestis YPO3691 conserved hypothetical protein (97.8% evalue=1.E-97); Escherichia coli ECs5211 alpha helix protein (78.5% evalue=6.E-76); hypothetical protein 4208960..4209508 Yersinia pseudotuberculosis IP 32953 2954907 YP_072025.1 CDS YPTB3543 NC_006155.1 4209652 4209933 R similar to Yersinia pestis YPO3690 ribonuclease inhibitor (100% evalue=3.E-48); Escherichia coli Z4598 yhcO; orf, hypothetical protein (53% evalue=2.E-18); ribonuclease inhibitor complement(4209652..4209933) Yersinia pseudotuberculosis IP 32953 2954908 YP_072026.1 CDS YPTB3544 NC_006155.1 4209938 4210411 R similar to Yersinia pestis YPO3689 ribonuclease (100% evalue=1.E-85); Clostridium acetobutylicum CAC0843 ribonuclease precursor (barnase), secreted. (41.5% evalue=2.E-25); ribonuclease complement(4209938..4210411) Yersinia pseudotuberculosis IP 32953 2954909 YP_072027.1 CDS YPTB3545 NC_006155.1 4210606 4212075 R similar to Salmonella typhi STY2911 gabD; succinate-semialdehyde dehydrogenase (56.8% evalue=1.E-155); Salmonella typhimurium STM2791 gabD; succinate-semialdehyde dehydrogenase I, NADP-dependent (57% evalue=1.E-156); succinate-semialdehyde dehydrogenase complement(4210606..4212075) Yersinia pseudotuberculosis IP 32953 2954910 YP_072028.1 CDS yhcP NC_006155.1 4212342 4214297 R with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB complement(4212342..4214297) Yersinia pseudotuberculosis IP 32953 2957056 YP_072029.1 CDS yhcQ NC_006155.1 4214299 4215234 R with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA complement(4214299..4215234) Yersinia pseudotuberculosis IP 32953 2957057 YP_072030.1 CDS YPTB3548 NC_006155.1 4215242 4215445 R membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein complement(4215242..4215445) Yersinia pseudotuberculosis IP 32953 2954911 YP_072031.1 CDS YPTB3549 NC_006155.1 4215748 4216659 D similar to Yersinia pestis YPO3683 probable lysR-family transcriptional regulatory protein (99.3% evalue=1.E-171); Escherichia coli ECs4116 transcriptional regulator LYSR-type (80.7% evalue=1.E-137); DNA-binding transcriptional regulator 4215748..4216659 Yersinia pseudotuberculosis IP 32953 2954912 YP_072032.1 CDS YPTB3550 NC_006155.1 4216920 4217786 D similar to Yersinia pestis YPO3682 lysR-family transcriptional regulatory protein (99.3% evalue=1.E-163); LysR family transcriptional regulator 4216920..4217786 Yersinia pseudotuberculosis IP 32953 2954913 YP_072033.1 CDS YPTB3551 NC_006155.1 4218022 4220514 D similar to Yersinia pestis YPO3681 insecticial toxin (96.2% evalue=0); insecticial toxin 4218022..4220514 Yersinia pseudotuberculosis IP 32953 2954914 YP_072034.1 CDS YPTB3552 NC_006155.1 4220555 4224133 D insecticidal toxin complex protein 4220555..4224133 Yersinia pseudotuberculosis IP 32953 2954915 YP_072035.1 CDS tcaC NC_006155.1 4224190 4228659 D similar to Yersinia pestis YPO3678 tcaC; insecticidal toxin complex (91.9% evalue=0); Salmonella typhimurium PSLT039 spvB; Salmonella plasmid virulence: hydrophilic protein (45% evalue=4.E-78); insecticidal toxin complex 4224190..4228659 Yersinia pseudotuberculosis IP 32953 2956672 YP_072036.1 CDS YPTB3554 NC_006155.1 4228799 4229101 D similar to Yersinia pestis YPO3677 phage-related protein (100% evalue=6.E-55); Escherichia coli ECs1621 holin protein (45.6% evalue=3.E-19); hypothetical protein 4228799..4229101 Yersinia pseudotuberculosis IP 32953 2954916 YP_072037.1 CDS YPTB3555 NC_006155.1 4229114 4229515 D similar to Yersinia pestis YPO3676 phage-related protein (98.4% evalue=1.E-76); Agrobacterium tumefaciens Atu0462 endolysin (58.1% evalue=1.E-36); hypothetical protein 4229114..4229515 Yersinia pseudotuberculosis IP 32953 2954917 YP_072038.1 CDS YPTB3556 NC_006155.1 4229503 4229871 D similar to Yersinia pestis YPO3675 exported protein (98.3% evalue=1.E-58); hypothetical protein 4229503..4229871 Yersinia pseudotuberculosis IP 32953 2954918 YP_072039.1 CDS YPTB3557 NC_006155.1 4230131 4232989 D similar to Yersinia pestis YPO3674 insecticidal toxin (76.9% evalue=0); insecticidal toxin 4230131..4232989 Yersinia pseudotuberculosis IP 32953 2954919 YP_072040.1 CDS tldD NC_006155.1 4233190 4234635 R responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD complement(4233190..4234635) Yersinia pseudotuberculosis IP 32953 2956708 YP_072041.1 CDS YPTB3559 NC_006155.1 4234647 4235516 R similar to Yersinia pestis YPO3671 carbon-nitrogen hydrolase (100% evalue=1.E-167); Vibrio cholerae VC0421 conserved hypothetical protein (48.4% evalue=6.E-71); carbon-nitrogen hydrolase complement(4234647..4235516) Yersinia pseudotuberculosis IP 32953 2954920 YP_072042.1 CDS YPTB3560 NC_006155.1 4235513 4239436 R similar to Yersinia pestis YPO3670 exported protein (99.2% evalue=0); Salmonella typhimurium STM3369 yhdP; paral protease (50.6% evalue=0); hypothetical protein complement(4235513..4239436) Yersinia pseudotuberculosis IP 32953 2954921 YP_072043.1 CDS cafA NC_006155.1 4239530 4240999 R involved in the processing of the 5'end of 16S rRNA; ribonuclease G complement(4239530..4240999) Yersinia pseudotuberculosis IP 32953 2955302 YP_072044.1 CDS maf NC_006155.1 4240989 4241588 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(4240989..4241588) Yersinia pseudotuberculosis IP 32953 2957059 YP_072045.1 CDS mreD NC_006155.1 4241596 4242084 R part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD complement(4241596..4242084) Yersinia pseudotuberculosis IP 32953 2956081 YP_072046.1 CDS mreC NC_006155.1 4242081 4243076 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(4242081..4243076) Yersinia pseudotuberculosis IP 32953 2956080 YP_072047.1 CDS mreB NC_006155.1 4243281 4244324 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(4243281..4244324) Yersinia pseudotuberculosis IP 32953 2956079 YP_072048.1 CDS yhdA NC_006155.1 4244661 4246577 R regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD complement(4244661..4246577) Yersinia pseudotuberculosis IP 32953 2957058 YP_072049.1 CDS yhdH NC_006155.1 4246978 4247955 D similar to Yersinia pestis YPO3663 yhdH; probable zinc-binding dehydrogenase (100% evalue=0); Escherichia coli ECs4125 dehydrogenase (74.6% evalue=1.E-140); zinc-binding dehydrogenase 4246978..4247955 Yersinia pseudotuberculosis IP 32953 2957060 YP_072050.1 CDS YPTB3568 NC_006155.1 4248178 4249278 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 4248178..4249278 Yersinia pseudotuberculosis IP 32953 2954922 YP_072051.1 CDS YPTB3569 NC_006155.1 4249278 4249898 D in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 4249278..4249898 Yersinia pseudotuberculosis IP 32953 2954923 YP_072052.1 CDS aroQ NC_006155.1 4250161 4250613 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4250161..4250613 Yersinia pseudotuberculosis IP 32953 2955232 YP_072053.1 CDS accB NC_006155.1 4250726 4251235 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 4250726..4251235 Yersinia pseudotuberculosis IP 32953 2955156 YP_072054.1 CDS accC NC_006155.1 4251247 4252596 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 4251247..4252596 Yersinia pseudotuberculosis IP 32953 2955157 YP_072055.1 CDS yhdT NC_006155.1 4254078 4254320 D similar to Yersinia pestis YPO3657a yhdT; membrane protein (100% evalue=1.E-41); Escherichia coli Z4617 yhdT; orf, hypothetical protein (69.6% evalue=8.E-28); hypothetical protein 4254078..4254320 Yersinia pseudotuberculosis IP 32953 2957061 YP_072056.1 CDS panF NC_006155.1 4254310 4255764 D mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4254310..4255764 Yersinia pseudotuberculosis IP 32953 2956211 YP_072057.2 CDS prmA NC_006155.1 4255840 4256721 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4255840..4256721 Yersinia pseudotuberculosis IP 32953 2956321 YP_072058.1 CDS YPTB3576 NC_006155.1 4257310 4258275 D similar to Yersinia pestis YPO3655 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs4132 dehydrogenase (87.8% evalue=1.E-164); tRNA-dihydrouridine synthase B 4257310..4258275 Yersinia pseudotuberculosis IP 32953 2954924 YP_072059.1 CDS fis NC_006155.1 4258300 4258596 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; Fis family transcriptional regulator 4258300..4258596 Yersinia pseudotuberculosis IP 32953 2955550 YP_072060.1 CDS YPTB3578 NC_006155.1 4259350 4259826 R similar to Yersinia pestis YPO3652 hypothetical protein (100% evalue=7.E-89); hypothetical protein complement(4259350..4259826) Yersinia pseudotuberculosis IP 32953 2954925 YP_072061.1 CDS YPTB3579 NC_006155.1 4259892 4260566 R similar to Yersinia pestis YPO3651 GntR-family transcriptional regulatory protein (98.2% evalue=1.E-115); Mesorhizobium loti mll6786 transcriptional regulator (37.1% evalue=2.E-33); GntR family transcriptional regulator complement(4259892..4260566) Yersinia pseudotuberculosis IP 32953 2954926 YP_072062.1 CDS YPTB3580 NC_006155.1 4260656 4262020 R similar to Yersinia pestis YPO3650 metabolite transport protein (99.5% evalue=0); Thermoplasma volcanium TVG1213986 shikimate transporter (26.5% evalue=9.E-43); major facilitator superfamily metabolite symporter complement(4260656..4262020) Yersinia pseudotuberculosis IP 32953 2954927 YP_072063.1 CDS YPTB3581 NC_006155.1 4262174 4262569 R similar to Yersinia pestis YPO3649 gamma carboxymuconolactone decarboxylase (98.4% evalue=2.E-71); S. C3502 solfataricus SSO2884 pcaC; 4-carboxymucolactone decarboxylase (49.1% evalue=1.E-28); gamma carboxymuconolactone decarboxylase complement(4262174..4262569) Yersinia pseudotuberculosis IP 32953 2954928 YP_072064.1 CDS YPTB3582 NC_006155.1 4262774 4263664 R similar to Yersinia pestis YPO3648 2-hydroxy-3-oxopropionate reductase (99.6% evalue=1.E-164); Ralstonia solanacearum RS05573 mmsB, RSp0649; probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase (34.2% evalue=6.E-38); 2-hydroxy-3-oxopropionate reductase complement(4262774..4263664) Yersinia pseudotuberculosis IP 32953 2954929 YP_072065.1 CDS YPTB3583 NC_006155.1 4263729 4264541 R similar to Yersinia pestis YPO3647 conserved hypothetical protein (99.2% evalue=1.E-162); A. fulgidus AF1509 A. fulgidus predicted coding region AF1509 (27.3% evalue=3.E-14); hypothetical protein complement(4263729..4264541) Yersinia pseudotuberculosis IP 32953 2954930 YP_072066.1 CDS pcp NC_006155.1 4265017 4265484 D similar to Yersinia pestis YPO3646 pcp, pcpY, slyB; outer membrane lipoprotein (100% evalue=7.E-81); outer membrane lipoprotein 4265017..4265484 Yersinia pseudotuberculosis IP 32953 2956220 YP_072067.1 CDS cspa1 NC_006155.1 4266018 4266230 D similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (98.5% evalue=2.E-34); cold-shock protein CspA 4266018..4266230 Yersinia pseudotuberculosis IP 32953 2955365 YP_072068.1 CDS cspa1 NC_006155.1 4266490 4266702 D similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (98.5% evalue=2.E-34); cold-shock protein CspA 4266490..4266702 Yersinia pseudotuberculosis IP 32953 2955366 YP_072069.1 CDS cspa2 NC_006155.1 4266962 4267174 D similar to Yersinia pestis YPO3644 cspa1; major cold shock protein Cspa1 (97.1% evalue=5.E-34); cold-shock protein CspA 4266962..4267174 Yersinia pseudotuberculosis IP 32953 2955367 YP_072070.1 CDS YPTB3588 NC_006155.1 4267510 4268685 D similar to Yersinia pestis YPO3641 hypothetical protein (99.4% evalue=0); Salmonella typhimurium STM0567 ATPase involved in DNA repair (58.5% evalue=1.E-125); hypothetical protein 4267510..4268685 Yersinia pseudotuberculosis IP 32953 2954931 YP_072071.1 CDS YPTB3589 NC_006155.1 4268837 4270183 R similar to Yersinia pestis YPO3640 exported protein (99.7% evalue=0); Sinorhizobium meliloti SMc00620 hypothetical signal peptide protein (53% evalue=1.E-129); hypothetical protein complement(4268837..4270183) Yersinia pseudotuberculosis IP 32953 2954932 YP_072072.1 CDS yghU NC_006155.1 4270434 4271288 D YghU; B2989; one of eight glutathione transferases from E. coli; glutathione S-transferase 4270434..4271288 Yersinia pseudotuberculosis IP 32953 2957052 YP_072073.1 CDS YPTB3591 NC_006155.1 4271387 4271992 R similar to Yersinia pestis YPO3638 phosphosugar isomerase/binding protein (99.5% evalue=1.E-108); Listeria innocua lin0502 similar to sugar-phosphate isomerase (44.5% evalue=5.E-42); phosphosugar isomerase/binding protein complement(4271387..4271992) Yersinia pseudotuberculosis IP 32953 2954933 YP_072074.1 CDS YPTB3592 NC_006155.1 4271989 4273626 R similar to Yersinia pestis YPO3637 carbohydrate kinase (100% evalue=0); A. thalianan At4g30310 F17I23.350; protein (50.4% evalue=1.E-162); carbohydrate kinase complement(4271989..4273626) Yersinia pseudotuberculosis IP 32953 2954934 YP_072075.1 CDS YPTB3593 NC_006155.1 4273645 4274598 R similar to Yersinia pestis YPO3636 ABC transporter, permease (99.3% evalue=1.E-170); Escherichia coli Z0419 permease component of transport system, probably ribose specific (58.7% evalue=6.E-91); sugar ABC transporter permease complement(4273645..4274598) Yersinia pseudotuberculosis IP 32953 2954935 YP_072076.1 CDS YPTB3594 NC_006155.1 4274600 4275589 R similar to Yersinia pestis YPO3635 branched-chain amino acid transport system, permease component (99.6% evalue=0); Escherichia coli Z0418 permease component of transport system, probably ribose specific (57.5% evalue=1.E-105); sugar ABC transporter permease complement(4274600..4275589) Yersinia pseudotuberculosis IP 32953 2954936 YP_072077.1 CDS YPTB3595 NC_006155.1 4275582 4277078 R similar to Yersinia pestis YPO3634 ABC transporter ATP binding protein (100% evalue=0); sugar ABC transporter ATPase complement(4275582..4277078) Yersinia pseudotuberculosis IP 32953 2954937 YP_072078.1 CDS YPTB3596 NC_006155.1 4277282 4278271 R similar to Yersinia pestis YPO3633 periplasmic binding protein (100% evalue=0); Escherichia coli ECs0374 sugar-binding protein (53.3% evalue=1.E-95); sugar ABC transporter substrate-binding protein complement(4277282..4278271) Yersinia pseudotuberculosis IP 32953 2954938 YP_072079.2 CDS ddg NC_006155.1 4279078 4279998 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 4279078..4279998 Yersinia pseudotuberculosis IP 32953 2955437 YP_072080.1 CDS YPTB3598 NC_006155.1 4280150 4281337 D similar to Yersinia pestis YPO3631 exported protein (99.4% evalue=0); hypothetical protein 4280150..4281337 Yersinia pseudotuberculosis IP 32953 2954939 YP_072081.1 CDS yjcE NC_006155.1 4281559 4283208 R similar to Yersinia pestis YPO3630 yjcE; Na(+)/H(+) exchanger protein (100% evalue=0); Escherichia coli ECs5047 hypothetical protein (75.3% evalue=0); Na(+)/H(+) exchanger protein complement(4281559..4283208) Yersinia pseudotuberculosis IP 32953 2957083 YP_072082.1 CDS yjcD NC_006155.1 4283573 4284928 R similar to Yersinia pestis YPO3629 yjcD; xanthine/uracil permease (99.7% evalue=0); Escherichia coli ECs3757 oxidoreductase (87.5% evalue=0); xanthine/uracil permease complement(4283573..4284928) Yersinia pseudotuberculosis IP 32953 2957082 YP_072083.1 CDS YPTB3601 NC_006155.1 4285383 4285586 D similar to Yersinia pestis YPO3628 DNA-damage-inducible protein (100% evalue=5.E-31); DNA-damage-inducible protein 4285383..4285586 Yersinia pseudotuberculosis IP 32953 2954940 YP_072084.1 CDS ssuB NC_006155.1 4286205 4287020 R part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit complement(4286205..4287020) Yersinia pseudotuberculosis IP 32953 2956640 YP_072085.1 CDS ssuC NC_006155.1 4287017 4287814 R similar to Yersinia pestis YPO3626 ssuC; aliphatic sulfonates transport permease (100% evalue=1.E-148); Pseudomonas aeruginosa PA3443 alkanesulfonate transport system permease (80.9% evalue=1.E-119); aliphatic sulfonates ABC transporter permease complement(4287017..4287814) Yersinia pseudotuberculosis IP 32953 2956641 YP_072086.1 CDS ssuD NC_006155.1 4287823 4288971 R catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase complement(4287823..4288971) Yersinia pseudotuberculosis IP 32953 2956642 YP_072087.1 CDS ssuA NC_006155.1 4288990 4290096 R part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit complement(4288990..4290096) Yersinia pseudotuberculosis IP 32953 2956639 YP_072088.1 CDS ssuE NC_006155.1 4290111 4290692 R similar to Yersinia pestis YPO3623 ssuE; NAD(P)H-dependent FMN reductase (100% evalue=1.E-102); Escherichia coli ECs1020 NAD(P)H-dependent FMN reductase (61.7% evalue=5.E-54); NAD(P)H-dependent FMN reductase complement(4290111..4290692) Yersinia pseudotuberculosis IP 32953 2956643 YP_072089.1 CDS YPTB3607 NC_006155.1 4291163 4291864 D similar to Yersinia pestis YPO3622 deoxyribose-phosphate aldolase (99.5% evalue=1.E-131); Methanothermobacter thermautotrophicus MTH818 deoxyribose-phosphate aldolase (34.1% evalue=3.E-26); deoxyribose-phosphate aldolase 4291163..4291864 Yersinia pseudotuberculosis IP 32953 2954941 YP_072090.1 CDS YPTB3608 NC_006155.1 4292045 4292974 D similar to Yersinia pestis YPO3621 probable carbohydrate kinase (99.3% evalue=1.E-172); Pseudomonas aeruginosa PA1950 rbsK; ribokinase (39.2% evalue=4.E-48); carbohydrate kinase 4292045..4292974 Yersinia pseudotuberculosis IP 32953 2954942 YP_072091.1 CDS YPTB3609 NC_006155.1 4292980 4293483 D similar to Yersinia pestis YPO3620 carbohydrate transport protein (98.8% evalue=2.E-92); H. influenzae HI0501 rbsD; D-ribose transport system permease (34% evalue=9.E-16); carbohydrate transport protein 4292980..4293483 Yersinia pseudotuberculosis IP 32953 2954943 YP_072092.1 CDS YPTB3610 NC_006155.1 4293643 4294521 R similar to Yersinia pestis YPO3619 araC-family transcriptional regulatory protein (99.6% evalue=1.E-173); Pseudomonas aeruginosa PA3571 mmsR; transcriptional regulator MmsR (23.5% evalue=6.E-20); AraC family transcriptional regulator complement(4293643..4294521) Yersinia pseudotuberculosis IP 32953 2954944 YP_072093.1 CDS YPTB3611 NC_006155.1 4294779 4295909 D similar to Yersinia pestis YPO3618 oxidoreductase (100% evalue=0); Mesorhizobium loti mll1735 hypothetical protein (43.9% evalue=5.E-84); oxidoreductase 4294779..4295909 Yersinia pseudotuberculosis IP 32953 2954945 YP_072094.1 CDS YPTB3612 NC_006155.1 4295906 4296805 D similar to Yersinia pestis YPO3617 hypothetical protein (100% evalue=1.E-172); Mesorhizobium loti mll1734 unknown protein (51.4% evalue=5.E-92); hypothetical protein 4295906..4296805 Yersinia pseudotuberculosis IP 32953 2954946 YP_072095.1 CDS YPTB3613 NC_006155.1 4297082 4297327 R similar to Yersinia pestis YPO3613 Rhs accessory genetic element (96.8% evalue=7.E-32); Rhs accessory genetic element complement(4297082..4297327) Yersinia pseudotuberculosis IP 32953 2954947 YP_072096.1 CDS YPTB3614 NC_006155.1 4297516 4297797 R hypothetical protein complement(4297516..4297797) Yersinia pseudotuberculosis IP 32953 2954948 YP_072097.1 CDS YPTB3615 NC_006155.1 4297794 4302356 R similar to Yersinia pestis YPO3615 membrane protein (98.1% evalue=0); Ralstonia solanacearum RS05482 rhs-related transmembrane protein (33% evalue=0); hypothetical protein complement(4297794..4302356) Yersinia pseudotuberculosis IP 32953 2954949 YP_072098.1 CDS YPTB3616 NC_006155.1 4302401 4302823 R similar to Yersinia pestis YPO3614 conserved hypothetical protein (100% evalue=7.E-78); Ralstonia solanacearum RS05481 conserved hypothetical protein (36.4% evalue=5.E-22); hypothetical protein complement(4302401..4302823) Yersinia pseudotuberculosis IP 32953 2954950 YP_072099.1 CDS YPTB3617 NC_006155.1 4302826 4305024 R similar to Yersinia pestis YPO3613 Rhs accessory genetic element (98.9% evalue=0); Rhs accessory genetic element complement(4302826..4305024) Yersinia pseudotuberculosis IP 32953 2954951 YP_072100.1 CDS YPTB3618 NC_006155.1 4305385 4305792 D similar to Yersinia pestis YPO3612 transcriptional regulatory protein (100% evalue=2.E-70); Vibrio cholerae VC1464 transcriptional repressor RstR (33.6% evalue=3.E-12); transcriptional regulator 4305385..4305792 Yersinia pseudotuberculosis IP 32953 2954952 YP_072101.1 CDS YPTB3619 NC_006155.1 4306095 4306448 D similar to Yersinia pestis YPO3611 hypothetical protein (80.3% evalue=8.E-17); hypothetical protein 4306095..4306448 Yersinia pseudotuberculosis IP 32953 2954953 YP_072102.1 CDS YPTB3620 NC_006155.1 4306508 4307125 R hypothetical protein complement(4306508..4307125) Yersinia pseudotuberculosis IP 32953 2954954 YP_072103.1 CDS YPTB3621 NC_006155.1 4307136 4311404 R similar to Yersinia pestis YPO3608 exported protein (99.6% evalue=0); hypothetical protein complement(4307136..4311404) Yersinia pseudotuberculosis IP 32953 2954955 YP_072104.1 CDS YPTB3622 NC_006155.1 4311397 4311855 R similar to Yersinia pestis YPO3607 conserved hypothetical protein (100% evalue=1.E-87); Salmonella typhi STY0320 hypothetical protein (35.7% evalue=1.E-17); hypothetical protein complement(4311397..4311855) Yersinia pseudotuberculosis IP 32953 2954956 YP_072105.1 CDS YPTB3623 NC_006155.1 4311861 4314080 R similar to Yersinia pestis YPO3613 Rhs accessory genetic element (83.8% evalue=0); Rhs accessory genetic element complement(4311861..4314080) Yersinia pseudotuberculosis IP 32953 2954957 YP_072106.1 CDS YPTB3624 NC_006155.1 4314102 4315415 R similar to Yersinia pestis YPO3605 conserved hypothetical protein (100% evalue=6.E-95); hypothetical protein complement(4314102..4315415) Yersinia pseudotuberculosis IP 32953 2954958 YP_072107.1 CDS YPTB3625 NC_006155.1 4315540 4319073 R similar to Yersinia pestis YPO3603 exported protein (99.7% evalue=0); Escherichia coli Z0250 macrophage toxin (57.3% evalue=0); hypothetical protein complement(4315540..4319073) Yersinia pseudotuberculosis IP 32953 2954959 YP_072108.1 CDS YPTB3626 NC_006155.1 4319105 4320493 R similar to Yersinia pestis YPO3602 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0220 hypothetical protein (53.3% evalue=4.E-71); hypothetical protein complement(4319105..4320493) Yersinia pseudotuberculosis IP 32953 2954960 YP_072109.1 CDS YPTB3627 NC_006155.1 4320499 4321185 R similar to Yersinia pestis YPO3601 conserved hypothetical protein (99.1% evalue=1.E-127); Escherichia coli ECs0222 hypothetical protein (50.2% evalue=1.E-47); hypothetical protein complement(4320499..4321185) Yersinia pseudotuberculosis IP 32953 2954961 YP_072110.1 CDS YPTB3628 NC_006155.1 4321182 4321979 R similar to Yersinia pestis YPO3600 hypothetical protein (100% evalue=1.E-151); hypothetical protein complement(4321182..4321979) Yersinia pseudotuberculosis IP 32953 2954962 YP_072111.1 CDS clpB2 NC_006155.1 4321976 4324579 R similar to Yersinia pestis YPO3599 clpB2; Clp ATPase (100% evalue=0); Escherichia coli ECs0223 ATP-dependent Clp proteinase ATP-binding chain (67.2% evalue=0); Clp ATPase complement(4321976..4324579) Yersinia pseudotuberculosis IP 32953 2955335 YP_072112.1 CDS YPTB3630 NC_006155.1 4324590 4325357 R similar to Yersinia pestis YPO3598 membrane protein (100% evalue=1.E-148); Escherichia coli ECs0224 membrane protein (62.5% evalue=4.E-85); hypothetical protein complement(4324590..4325357) Yersinia pseudotuberculosis IP 32953 2954963 YP_072113.1 CDS YPTB3631 NC_006155.1 4325357 4326703 R similar to Yersinia pestis YPO3597 conserved hypothetical protein (100% evalue=0); Escherichia coli ECs0225 hypothetical protein (53.8% evalue=1.E-131); hypothetical protein complement(4325357..4326703) Yersinia pseudotuberculosis IP 32953 2954964 YP_072114.1 CDS YPTB3632 NC_006155.1 4326706 4327251 R similar to Yersinia pestis YPO3596 lipoprotein (100% evalue=1.E-101); Escherichia coli ECs0226 hypothetical lipoprotein (46.9% evalue=4.E-47); lipoprotein complement(4326706..4327251) Yersinia pseudotuberculosis IP 32953 2954965 YP_072115.1 CDS YPTB3633 NC_006155.1 4327251 4328567 R similar to Yersinia pestis YPO3595 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0227 hypothetical protein (45.2% evalue=6.E-98); hypothetical protein complement(4327251..4328567) Yersinia pseudotuberculosis IP 32953 2954966 YP_072116.1 CDS YPTB3634 NC_006155.1 4328693 4329781 R similar to Yersinia pestis YPO3594 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs0228 hypothetical protein (57.8% evalue=1.E-104); hypothetical protein complement(4328693..4329781) Yersinia pseudotuberculosis IP 32953 2954967 YP_072117.1 CDS YPTB3635 NC_006155.1 4329745 4331565 R similar to Escherichia coli ECs0229 hypothetical protein (50.9% evalue=0); Escherichia coli Z0260 hypothetical protein (50.9% evalue=0); hypothetical protein complement(4329745..4331565) Yersinia pseudotuberculosis IP 32953 2954968 YP_072118.1 CDS YPTB3636 NC_006155.1 4331565 4332005 R similar to Yersinia pestis YPO3705 conserved hypothetical protein (100% evalue=4.E-79); Escherichia coli ECs0230 hypothetical protein (35.8% evalue=4.E-20); hypothetical protein complement(4331565..4332005) Yersinia pseudotuberculosis IP 32953 2954969 YP_072119.1 CDS YPTB3637 NC_006155.1 4332012 4333493 R similar to Yersinia pestis YPO3706 conserved hypothetical protein (99.7% evalue=0); Vibrio cholerae VCA0108 conserved hypothetical protein (77.1% evalue=0); hypothetical protein complement(4332012..4333493) Yersinia pseudotuberculosis IP 32953 2954970 YP_072120.1 CDS YPTB3638 NC_006155.1 4333561 4334058 R similar to Yersinia pestis YPO3707 conserved hypothetical protein (99.3% evalue=4.E-87); Escherichia coli Z0264 hypothetical protein (62.6% evalue=8.E-52); hypothetical protein complement(4333561..4334058) Yersinia pseudotuberculosis IP 32953 2954971 YP_072121.1 CDS YPTB3639 NC_006155.1 4334582 4335100 D similar to Yersinia pestis YPO3708 conserved hypothetical protein (99.4% evalue=1.E-97); Escherichia coli Z0266 hypothetical protein (80.2% evalue=7.E-80); hypothetical protein 4334582..4335100 Yersinia pseudotuberculosis IP 32953 2954972 YP_072122.1 CDS YPTB3640 NC_006155.1 4335252 4335530 R similar to Yersinia pestis YPO3709 hypothetical protein (95.6% evalue=1.E-46); hypothetical protein complement(4335252..4335530) Yersinia pseudotuberculosis IP 32953 2954973 YP_072123.1 CDS malM NC_006155.1 4336002 4336913 R similar to Yersinia pestis YPO3710 malM, molA; maltose operon periplasmic protein (99.6% evalue=1.E-167); Salmonella typhi STY4428 malM; maltose operon periplasmic protein (50.6% evalue=3.E-82); maltose regulon periplasmic protein complement(4336002..4336913) Yersinia pseudotuberculosis IP 32953 2955988 YP_072124.1 CDS lamB NC_006155.1 4337154 4338425 R porin involved in the transport of maltose and maltodextrins; maltoporin complement(4337154..4338425) Yersinia pseudotuberculosis IP 32953 2955934 YP_072125.1 CDS malK NC_006155.1 4338496 4339605 R with malEFG is involved in import of maltose/maltodextrin; maltose ABC transporter ATP-binding protein complement(4338496..4339605) Yersinia pseudotuberculosis IP 32953 2955987 YP_072126.1 CDS YPTB3644 NC_006155.1 4339609 4339845 R similar to Yersinia pestis YPO3713 hypothetical protein, 100% identical.; hypothetical protein complement(4339609..4339845) Yersinia pseudotuberculosis IP 32953 2954974 YP_072127.1 CDS malE NC_006155.1 4340433 4341644 D functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter substrate-binding protein 4340433..4341644 Yersinia pseudotuberculosis IP 32953 2955984 YP_072128.1 CDS malF NC_006155.1 4341831 4343408 D with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 4341831..4343408 Yersinia pseudotuberculosis IP 32953 2955985 YP_072129.1 CDS malG NC_006155.1 4343422 4344312 D with MalKFE is involved in the transport of maltose into the cell; maltose ABC transporter permease 4343422..4344312 Yersinia pseudotuberculosis IP 32953 2955986 YP_072130.1 CDS yjbA NC_006155.1 4344455 4344862 R similar to Yersinia pestis YPO3717 yjbA; membrane protein (100% evalue=2.E-70); Escherichia coli b4030 yjbA; hypothetical 15.6 kD protein in pgi-xylE intergenic region (67.6% evalue=1.E-45); phosphate-starvation-inducible protein PsiE complement(4344455..4344862) Yersinia pseudotuberculosis IP 32953 2957081 YP_072131.1 CDS pgi NC_006155.1 4344997 4346643 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(4344997..4346643) Yersinia pseudotuberculosis IP 32953 2956241 YP_072132.1 CDS lysC NC_006155.1 4347013 4348398 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase 4347013..4348398 Yersinia pseudotuberculosis IP 32953 2955977 YP_072133.1 CDS YPTB3652 NC_006155.1 4350725 4355632 D similar to Yersinia pestis YPO3721 hemolysin (99.6% evalue=0); hemolysin 4350725..4355632 Yersinia pseudotuberculosis IP 32953 2954976 YP_072134.1 CDS metH NC_006155.1 4355728 4359420 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(4355728..4359420) Yersinia pseudotuberculosis IP 32953 2956026 YP_072135.1 CDS YPTB3654 NC_006155.1 4359638 4360480 D regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator 4359638..4360480 Yersinia pseudotuberculosis IP 32953 2954977 YP_072136.1 CDS aceK NC_006155.1 4360600 4362327 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase complement(4360600..4362327) Yersinia pseudotuberculosis IP 32953 2955163 YP_072137.1 CDS aceA NC_006155.1 4362400 4363707 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(4362400..4363707) Yersinia pseudotuberculosis IP 32953 2955159 YP_072138.1 CDS aceB NC_006155.1 4363754 4365352 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(4363754..4365352) Yersinia pseudotuberculosis IP 32953 2955160 YP_072139.1 CDS metA NC_006155.1 4365773 4366702 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(4365773..4366702) Yersinia pseudotuberculosis IP 32953 2956019 YP_072140.1 CDS YPTB3659 NC_006155.1 4373446 4373988 D similar to Salmonella typhi STY4398 yrdA; transferase (73.5% evalue=3.E-72); Salmonella typhimurium STM3399 yrdA; ferripyochelin binding protein (73.5% evalue=2.E-72); transferase 4373446..4373988 Yersinia pseudotuberculosis IP 32953 2954978 YP_072141.1 CDS aroE NC_006155.1 4374043 4374864 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(4374043..4374864) Yersinia pseudotuberculosis IP 32953 2955224 YP_072142.1 CDS YPTB3661 NC_006155.1 4374873 4375445 R RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; ribosome maturation factor complement(4374873..4375445) Yersinia pseudotuberculosis IP 32953 2954979 YP_072143.1 CDS YPTB3662 NC_006155.1 4375447 4376007 R similar to Yersinia pestis YPO0245 DNA-binding protein (99.4% evalue=1.E-108); Salmonella typhimurium STM3403 yrdD; DNA topoisomerase (71.3% evalue=9.E-77); DNA-binding protein complement(4375447..4376007) Yersinia pseudotuberculosis IP 32953 2954980 YP_072144.1 CDS YPTB3663 NC_006155.1 4376027 4376500 R similar to Yersinia pestis YPO0244 conserved hypothetical protein (100% evalue=2.E-80); Salmonella typhi STY4393 smg; conserved hypothetical protein (71.3% evalue=4.E-61); hypothetical protein complement(4376027..4376500) Yersinia pseudotuberculosis IP 32953 2954981 YP_072145.1 CDS YPTB3664 NC_006155.1 4376472 4377593 R similar to Yersinia pestis YPO0243 conserved hypothetical protein (99.7% evalue=0); Escherichia coli ECs4151 hypothetical protein (54.2% evalue=1.E-107); DNA protecting protein DprA complement(4376472..4377593) Yersinia pseudotuberculosis IP 32953 2954982 YP_072146.1 CDS def NC_006155.1 4377728 4378240 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4377728..4378240 Yersinia pseudotuberculosis IP 32953 2955446 YP_072147.1 CDS fmt NC_006155.1 4378265 4379212 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 4378265..4379212 Yersinia pseudotuberculosis IP 32953 2955627 YP_072148.1 CDS YPTB3667 NC_006155.1 4379306 4380595 D catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase GidB 4379306..4380595 Yersinia pseudotuberculosis IP 32953 2954983 YP_072149.1 CDS trkA NC_006155.1 4380651 4382027 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 4380651..4382027 Yersinia pseudotuberculosis IP 32953 2956732 YP_072150.1 CDS mscL NC_006155.1 4382166 4382579 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 4382166..4382579 Yersinia pseudotuberculosis IP 32953 2956085 YP_072151.1 CDS YPTB3670 NC_006155.1 4382689 4382889 R similar to Yersinia pestis YPO0237 conserved hypothetical protein (100% evalue=1.E-32); Escherichia coli JW3253 yhdL; Hypothetical protein (73.6% evalue=5.E-20); hypothetical protein complement(4382689..4382889) Yersinia pseudotuberculosis IP 32953 2954984 YP_072152.1 CDS zntR NC_006155.1 4382977 4383402 R mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator complement(4382977..4383402) Yersinia pseudotuberculosis IP 32953 2954985 YP_072153.1 CDS rplQ NC_006155.1 4383849 4384238 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(4383849..4384238) Yersinia pseudotuberculosis IP 32953 2956501 YP_072154.1 CDS rpoA NC_006155.1 4384279 4385268 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(4384279..4385268) Yersinia pseudotuberculosis IP 32953 2956520 YP_072155.1 CDS rpsD NC_006155.1 4385294 4385914 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(4385294..4385914) Yersinia pseudotuberculosis IP 32953 2956533 YP_072156.1 CDS rpsK NC_006155.1 4385945 4386334 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(4385945..4386334) Yersinia pseudotuberculosis IP 32953 2956539 YP_072157.1 CDS rpsM NC_006155.1 4386351 4386707 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(4386351..4386707) Yersinia pseudotuberculosis IP 32953 2956541 YP_072158.1 CDS rpmJ NC_006155.1 4386855 4386971 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(4386855..4386971) Yersinia pseudotuberculosis IP 32953 2956519 YP_072159.1 CDS secY NC_006155.1 4387005 4388336 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(4387005..4388336) Yersinia pseudotuberculosis IP 32953 2956588 YP_072160.1 CDS rplO NC_006155.1 4388344 4388778 R late assembly protein; 50S ribosomal protein L15 complement(4388344..4388778) Yersinia pseudotuberculosis IP 32953 2956499 YP_072161.1 CDS rpmD NC_006155.1 4388782 4388961 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(4388782..4388961) Yersinia pseudotuberculosis IP 32953 2956513 YP_072162.1 CDS rpsE NC_006155.1 4388964 4389467 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(4388964..4389467) Yersinia pseudotuberculosis IP 32953 2956534 YP_072163.1 CDS rplR NC_006155.1 4389482 4389835 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(4389482..4389835) Yersinia pseudotuberculosis IP 32953 2956502 YP_072164.1 CDS rplF NC_006155.1 4389845 4390378 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(4389845..4390378) Yersinia pseudotuberculosis IP 32953 2956492 YP_072165.1 CDS rpsH NC_006155.1 4390393 4390785 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(4390393..4390785) Yersinia pseudotuberculosis IP 32953 2956537 YP_072166.1 CDS rpsN NC_006155.1 4390819 4391124 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(4390819..4391124) Yersinia pseudotuberculosis IP 32953 2956542 YP_072167.1 CDS rplE NC_006155.1 4391138 4391677 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(4391138..4391677) Yersinia pseudotuberculosis IP 32953 2956491 YP_072168.1 CDS rplX NC_006155.1 4391692 4392006 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(4391692..4392006) Yersinia pseudotuberculosis IP 32953 2956508 YP_072169.1 CDS rplN NC_006155.1 4392017 4392388 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(4392017..4392388) Yersinia pseudotuberculosis IP 32953 2956498 YP_072170.1 CDS rpsQ NC_006155.1 4392569 4392823 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(4392569..4392823) Yersinia pseudotuberculosis IP 32953 2956544 YP_072171.1 CDS rpmC NC_006155.1 4392823 4393014 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(4392823..4393014) Yersinia pseudotuberculosis IP 32953 2956512 YP_072172.1 CDS rplP NC_006155.1 4393014 4393424 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(4393014..4393424) Yersinia pseudotuberculosis IP 32953 2956500 YP_072173.1 CDS rpsC NC_006155.1 4393437 4394135 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(4393437..4394135) Yersinia pseudotuberculosis IP 32953 2956532 YP_072174.1 CDS rplV NC_006155.1 4394153 4394485 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(4394153..4394485) Yersinia pseudotuberculosis IP 32953 2956506 YP_072175.1 CDS rpsS NC_006155.1 4394500 4394778 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(4394500..4394778) Yersinia pseudotuberculosis IP 32953 2956546 YP_072176.1 CDS rplB NC_006155.1 4394793 4395617 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(4394793..4395617) Yersinia pseudotuberculosis IP 32953 2956488 YP_072177.1 CDS rplW NC_006155.1 4395634 4395936 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(4395634..4395936) Yersinia pseudotuberculosis IP 32953 2956507 YP_072178.2 CDS rplD NC_006155.1 4395933 4396538 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(4395933..4396538) Yersinia pseudotuberculosis IP 32953 2956490 YP_072179.1 CDS rplC NC_006155.1 4396555 4397184 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(4396555..4397184) Yersinia pseudotuberculosis IP 32953 2956489 YP_072180.1 CDS rpsJ NC_006155.1 4397217 4397528 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(4397217..4397528) Yersinia pseudotuberculosis IP 32953 2956529 YP_072181.1 CDS bfr NC_006155.1 4397926 4398399 R iron storage protein; bacterioferritin complement(4397926..4398399) Yersinia pseudotuberculosis IP 32953 2955281 YP_072182.1 CDS bfd NC_006155.1 4398478 4398684 R similar to Yersinia pestis YPO0205 bfd; bacterioferritin-associated ferredoxin (100% evalue=2.E-31); Salmonella typhimurium STM3444 bfd; Bacterioferritin-associated ferredoxin (56.2% evalue=8.E-18); bacterioferritin-associated ferredoxin complement(4398478..4398684) Yersinia pseudotuberculosis IP 32953 2955280 YP_072183.1 CDS tuf NC_006155.1 4398811 4399995 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4398811..4399995) Yersinia pseudotuberculosis IP 32953 2956843 YP_072184.1 CDS fusA NC_006155.1 4400067 4402175 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(4400067..4402175) Yersinia pseudotuberculosis IP 32953 2955667 YP_072185.1 CDS rpsG NC_006155.1 4402269 4402739 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(4402269..4402739) Yersinia pseudotuberculosis IP 32953 2956536 YP_072186.1 CDS rpsL NC_006155.1 4402836 4403210 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(4402836..4403210) Yersinia pseudotuberculosis IP 32953 2956540 YP_072187.1 CDS YPTB3706 NC_006155.1 4403348 4403635 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB complement(4403348..4403635) Yersinia pseudotuberculosis IP 32953 2954986 YP_072188.1 CDS YPTB3707 NC_006155.1 4403655 4404020 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(4403655..4404020) Yersinia pseudotuberculosis IP 32953 2954987 YP_072189.1 CDS YPTB3708 NC_006155.1 4404020 4404415 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(4404020..4404415) Yersinia pseudotuberculosis IP 32953 2954988 YP_072190.1 CDS YPTB3709 NC_006155.1 4404415 4405137 R similar to Yersinia pestis YPO0196 DNA-binding protein (100% evalue=1.E-132); Escherichia coli ECs4197 hypothetical protein (86.6% evalue=1.E-115); DNA-binding protein complement(4404415..4405137) Yersinia pseudotuberculosis IP 32953 2954989 YP_072191.1 CDS fkpA NC_006155.1 4405391 4406191 R rotamase; FKBP-type peptidylprolyl isomerase complement(4405391..4406191) Yersinia pseudotuberculosis IP 32953 2955552 YP_072192.1 CDS YPTB3711 NC_006155.1 4406506 4406724 D similar to Yersinia pestis YPO0194 conserved hypothetical protein (100% evalue=5.E-34); Salmonella typhimurium STM3454 slyX; cytoplasmic protein (69.4% evalue=2.E-22); hypothetical protein 4406506..4406724 Yersinia pseudotuberculosis IP 32953 2954990 YP_072193.1 CDS slyD NC_006155.1 4406945 4407538 R rotamase; FKBP-type peptidylprolyl isomerase complement(4406945..4407538) Yersinia pseudotuberculosis IP 32953 2956612 YP_072194.1 CDS YPTB3713 NC_006155.1 4407633 4407854 R similar to Yersinia pestis YPO0192 conserved hypothetical protein (100% evalue=8.E-39); Salmonella typhi STY4342 yheV; conserved hypothetical protein (65% evalue=2.E-20); hypothetical protein complement(4407633..4407854) Yersinia pseudotuberculosis IP 32953 2954991 YP_072195.1 CDS kefB NC_006155.1 4407870 4409678 R involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB complement(4407870..4409678) Yersinia pseudotuberculosis IP 32953 2955926 YP_072196.1 CDS YPTB3715 NC_006155.1 4409682 4410230 R required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG complement(4409682..4410230) Yersinia pseudotuberculosis IP 32953 2954992 YP_072197.1 CDS yheS NC_006155.1 4410481 4412403 D similar to Salmonella typhi STY4339 yheS; probable ABC transporter ATP-binding protein (81.3% evalue=0); Salmonella typhimurium STM3459 yheS; ATPase component of ABC transporter with duplicated ATPase domain (81.5% evalue=0); ABC transporter ATP-binding protein 4410481..4412403 Yersinia pseudotuberculosis IP 32953 2957062 YP_072198.1 CDS YPTB3717 NC_006155.1 4412538 4413527 D similar to Yersinia pestis YPO0187 glycosyl transferase (99.3% evalue=0); Escherichia coli ECs4493 regulator (29.1% evalue=2.E-30); glycosyl transferase family protein 4412538..4413527 Yersinia pseudotuberculosis IP 32953 2954993 YP_072199.1 CDS YPTB3718 NC_006155.1 4413620 4414600 D similar to Yersinia pestis YPO0186 sugar transferase (98.7% evalue=0); Escherichia coli ECs4507 lipopolysaccharide core biosynthesis protein RfaQ (22.3% evalue=1.E-10); sugar transferase 4413620..4414600 Yersinia pseudotuberculosis IP 32953 2954994 YP_072200.1 CDS tauD NC_006155.1 4414613 4415461 R catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase complement(4414613..4415461) Yersinia pseudotuberculosis IP 32953 2956670 YP_072201.1 CDS tauC NC_006155.1 4415458 4416312 R similar to Yersinia pestis YPO0184 tauC, ssiC; taurine transport system permease (100% evalue=1.E-157); Escherichia coli ECs0421 taurine transport system permease (77.6% evalue=1.E-112); taurine transporter subunit complement(4415458..4416312) Yersinia pseudotuberculosis IP 32953 2956669 YP_072202.1 CDS tauB NC_006155.1 4416309 4417076 R Part of the ABC transporter complex tauABC involved in taurine import; taurine transporter ATP-binding subunit complement(4416309..4417076) Yersinia pseudotuberculosis IP 32953 2956668 YP_072203.1 CDS tauA NC_006155.1 4417085 4418146 R with TauB and TauC is responsible for taurine uptake.; taurine ABC transporter substrate-binding protein complement(4417085..4418146) Yersinia pseudotuberculosis IP 32953 2956666 YP_072204.1 CDS YPTB3723 NC_006155.1 4418349 4418951 R similar to Yersinia pestis YPO0181 ABC-transport protein (99.5% evalue=1.E-111); Mesorhizobium loti mll1430 hypothetical protein (40.4% evalue=1.E-34); LysE/RhtB family efflux protein complement(4418349..4418951) Yersinia pseudotuberculosis IP 32953 2954995 YP_072205.1 CDS YPTB3724 NC_006155.1 4419053 4420033 D similar to Yersinia pestis YPO0180 conserved hypothetical protein (100% evalue=0); Escherichia coli b3353 yheT; hypothetical 38.5 kD protein in kifb-prkB intergenic region (69.5% evalue=1.E-134); hydrolase 4419053..4420033 Yersinia pseudotuberculosis IP 32953 2954996 YP_072206.1 CDS YPTB3725 NC_006155.1 4420030 4420266 D similar to Yersinia pestis YPO0179 conserved hypothetical protein (98.7% evalue=2.E-38); Salmonella typhi STY4334 yheU; conserved hypothetical protein (78.5% evalue=7.E-27); hypothetical protein 4420030..4420266 Yersinia pseudotuberculosis IP 32953 2954997 YP_072207.1 CDS prk NC_006155.1 4420415 4421284 D similar to Yersinia pestis YPO0178 prk; phosphoribulokinase 1 (100% evalue=1.E-167); Escherichia coli b3355 prkB; probable phosphoribulokinase (phosphopentokinase) (PRK) (86.4% evalue=1.E-146); phosphoribulokinase 1 4420415..4421284 Yersinia pseudotuberculosis IP 32953 2956320 YP_072208.1 CDS YPTB3727 NC_006155.1 4421462 4421893 R similar to Yersinia pestis YPO2790 membrane protein (42.1% evalue=6.E-22); hypothetical protein complement(4421462..4421893) Yersinia pseudotuberculosis IP 32953 2954998 YP_072209.1 CDS YPTB3728 NC_006155.1 4421965 4422372 R similar to Yersinia pestis YPO0176 conserved hypothetical protein (100% evalue=1.E-71); Escherichia coli b3356 yhfA; hypothetical 14.5 kD protein in prkB-CRP intergenic region (F134) (86.2% evalue=1.E-59); hypothetical protein complement(4421965..4422372) Yersinia pseudotuberculosis IP 32953 2954999 YP_072210.1 CDS crp NC_006155.1 4422708 4423340 D complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4422708..4423340 Yersinia pseudotuberculosis IP 32953 2955362 YP_072211.1 CDS YPTB3730 NC_006155.1 4423426 4425546 D similar to Yersinia pestis YPO0174 membrane protein (98.5% evalue=0); Salmonella typhimurium STM3467 yhfK; inner membrane protein (57% evalue=0); efflux transporter (PET) family protein 4423426..4425546 Yersinia pseudotuberculosis IP 32953 2955000 YP_072212.1 CDS argD NC_006155.1 4425772 4426989 R DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase complement(4425772..4426989) Yersinia pseudotuberculosis IP 32953 2955001 YP_072213.1 CDS pabA NC_006155.1 4427122 4427697 R aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II complement(4427122..4427697) Yersinia pseudotuberculosis IP 32953 2956203 YP_072214.1 CDS YPTB3733 NC_006155.1 4427941 4429482 R similar to Yersinia pestis YPO0168 conserved hypothetical protein (99.4% evalue=0); Escherichia coli Z5875 yjgR; orf, hypothetical protein (67.4% evalue=0); hypothetical protein complement(4427941..4429482) Yersinia pseudotuberculosis IP 32953 2955002 YP_072215.1 CDS ppiA NC_006155.1 4429808 4430377 R similar to Yersinia pestis YPO0167 ppiA, rotA; peptidyl-prolyl cis-trans isomerase A (100% evalue=1.E-104); Escherichia coli Z4724 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) (79.4% evalue=2.E-83); peptidyl-prolyl cis-trans isomerase A complement(4429808..4430377) Yersinia pseudotuberculosis IP 32953 2956306 YP_072216.1 CDS YPTB3735 NC_006155.1 4430892 4432205 D similar to Yersinia pestis YPO0166 6-phospho-beta-glucosidase, (99.7% evalue=0); Vibrio cholerae VC1284 6-phospho-beta-glucosidase (55.8% evalue=1.E-139); glycosyl hydrolase 4430892..4432205 Yersinia pseudotuberculosis IP 32953 2955003 YP_072217.1 CDS YPTB3736 NC_006155.1 4432454 4433440 D similar to Yersinia pestis YPO0165 LacI-family transcriptional regulator (100% evalue=0); Vibrio cholerae VC1286 transcriptional regulator, LacI family (47.2% evalue=2.E-76); LacI family transcriptional regulator 4432454..4433440 Yersinia pseudotuberculosis IP 32953 2955004 YP_072218.1 CDS YPTB3737 NC_006155.1 4433551 4435596 R similar to Yersinia pestis YPO0164 membrane receptor protein (98.3% evalue=0); Pseudomonas aeruginosa PA3790 oprC; outer membrane protein OprC (58.8% evalue=0); iron siderophore receptor/tonB dependent transporter complement(4433551..4435596) Yersinia pseudotuberculosis IP 32953 2955005 YP_072219.1 CDS YPTB3738 NC_006155.1 4436082 4437266 D similar to Yersinia pestis YPO0163 conserved integral membrane protein (99.7% evalue=0); Escherichia coli Z4725 yhfC; transport (74.8% evalue=1.E-170); hypothetical protein 4436082..4437266 Yersinia pseudotuberculosis IP 32953 2955006 YP_072220.1 CDS codA NC_006155.1 4437351 4438649 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(4437351..4438649) Yersinia pseudotuberculosis IP 32953 2955347 YP_072221.1 CDS nirB NC_006155.1 4438971 4441517 D similar to Yersinia pestis YPO0161 nirB; nitrite reductase (99.7% evalue=0); Salmonella typhimurium STM3474 nirB; nitrite reductase, large subunit (84.1% evalue=0); nitrite reductase 4438971..4441517 Yersinia pseudotuberculosis IP 32953 2956142 YP_072222.1 CDS nirD NC_006155.1 4441514 4441840 D involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 4441514..4441840 Yersinia pseudotuberculosis IP 32953 2956144 YP_072223.1 CDS nirC NC_006155.1 4442007 4442813 D member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 4442007..4442813 Yersinia pseudotuberculosis IP 32953 2956143 YP_072224.1 CDS cysG NC_006155.1 4442876 4444297 D multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 4442876..4444297 Yersinia pseudotuberculosis IP 32953 2955404 YP_072225.1 CDS trpS NC_006155.1 4444434 4445474 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(4444434..4445474) Yersinia pseudotuberculosis IP 32953 2956833 YP_072226.2 CDS gph NC_006155.1 4445476 4446174 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(4445476..4446174) Yersinia pseudotuberculosis IP 32953 2955738 YP_072227.1 CDS rpe NC_006155.1 4446167 4446844 R similar to Yersinia pestis YPO0155 rpe; ribulose-phosphate 3-epimerase (100% evalue=1.E-125); Escherichia coli b3386 rpe, dod; ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) (87% evalue=1.E-109); ribulose-phosphate 3-epimerase complement(4446167..4446844) Yersinia pseudotuberculosis IP 32953 2956482 YP_072228.1 CDS dam NC_006155.1 4447147 4447962 R similar to Yersinia pestis YPO0154 dam; DNA adenine methylase (100% evalue=1.E-159); Salmonella typhi STY4312 dam; DNA adenine methylase (70% evalue=1.E-109); DNA adenine methylase complement(4447147..4447962) Yersinia pseudotuberculosis IP 32953 2955425 YP_072229.1 CDS YPTB3748 NC_006155.1 4448046 4449035 R similar to Yersinia pestis YPO0153 conserved hypothetical membrane protein (99.3% evalue=0); Escherichia coli ECs4230 membrane protein DamX (40.8% evalue=5.E-60); hypothetical protein complement(4448046..4449035) Yersinia pseudotuberculosis IP 32953 2955007 YP_072230.1 CDS aroB NC_006155.1 4449289 4450377 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(4449289..4450377) Yersinia pseudotuberculosis IP 32953 2955222 YP_072231.1 CDS aroK NC_006155.1 4450434 4450955 R type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I complement(4450434..4450955) Yersinia pseudotuberculosis IP 32953 2955228 YP_072232.2 CDS hofQ NC_006155.1 4451304 4452428 R outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; porin complement(4451304..4452428) Yersinia pseudotuberculosis IP 32953 2955008 YP_072233.1 CDS YPTB3752 NC_006155.1 4452870 4453280 R similar to Yersinia pestis YPO0149 membrane protein (99.1% evalue=2.E-66); hypothetical protein complement(4452870..4453280) Yersinia pseudotuberculosis IP 32953 2955009 YP_072234.1 CDS YPTB3753 NC_006155.1 4453264 4453845 R similar to Yersinia pestis YPO0148 membrane protein (98.9% evalue=1.E-108); hypothetical protein complement(4453264..4453845) Yersinia pseudotuberculosis IP 32953 2955010 YP_072235.1 CDS YPTB3754 NC_006155.1 4453838 4454443 R similar to Yersinia pestis YPO0147 membrane protein (99% evalue=1.E-113); Escherichia coli Z4748 yrfC; orf, hypothetical protein (28.3% evalue=1.E-10); hypothetical protein complement(4453838..4454443) Yersinia pseudotuberculosis IP 32953 2955011 YP_072236.1 CDS YPTB3755 NC_006155.1 4454443 4455339 R similar to Yersinia pestis YPO0146 hypothetical protein (98.3% evalue=1.E-168); Salmonella typhi STY4304 yrfD; conserved hypothetical protein (25.3% evalue=1.E-17); hypothetical protein complement(4454443..4455339) Yersinia pseudotuberculosis IP 32953 2955012 YP_072237.3 CDS mrcA NC_006155.1 4455459 4458014 D bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 4455459..4458014 Yersinia pseudotuberculosis IP 32953 2956077 YP_072238.1 CDS nudE NC_006155.1 4458151 4458696 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(4458151..4458696) Yersinia pseudotuberculosis IP 32953 2955013 YP_072239.1 CDS YPTB3758 NC_006155.1 4459529 4461676 D similar to Yersinia pestis YPO0142 membrane protein (99.7% evalue=0); Escherichia coli JW3361 yrfF; Hypothetical protein (53.4% evalue=0); hypothetical protein 4459529..4461676 Yersinia pseudotuberculosis IP 32953 2955014 YP_072240.1 CDS YPTB3759 NC_006155.1 4461820 4462500 D similar to Yersinia pestis YPO0141 conserved hypothetical protein (100% evalue=1.E-133); Escherichia coli JW3362 yrfG; Hypothetical protein (68.3% evalue=3.E-87); hypothetical protein 4461820..4462500 Yersinia pseudotuberculosis IP 32953 2955015 YP_072241.1 CDS hslR NC_006155.1 4462529 4462936 D similar to Yersinia pestis YPO0140 hslR; heat shock protein 15 (100% evalue=2.E-73); Escherichia coli JW3363 hslR; Hsp15. DNA/RNA binding heat shock protein (73.3% evalue=5.E-52); heat shock protein 15 4462529..4462936 Yersinia pseudotuberculosis IP 32953 2955841 YP_072242.1 CDS hslO NC_006155.1 4463099 4463980 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 4463099..4463980 Yersinia pseudotuberculosis IP 32953 2955840 YP_072243.1 CDS pckA NC_006155.1 4464177 4465796 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4464177..4465796 Yersinia pseudotuberculosis IP 32953 2956216 YP_072244.1 CDS envZ NC_006155.1 4466115 4467467 R membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein complement(4466115..4467467) Yersinia pseudotuberculosis IP 32953 2955508 YP_072245.1 CDS ompR NC_006155.1 4467464 4468183 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(4467464..4468183) Yersinia pseudotuberculosis IP 32953 2956191 YP_072246.1 CDS greB NC_006155.1 4468319 4468834 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(4468319..4468834) Yersinia pseudotuberculosis IP 32953 2955744 YP_072247.1 CDS YPTB3766 NC_006155.1 4469353 4471728 D similar to Yersinia pestis YPO0134 conserved hypothetical protein (99.8% evalue=0); Escherichia coli JW3370 yhgF; Hypothetical protein (82.8% evalue=0); hypothetical protein 4469353..4471728 Yersinia pseudotuberculosis IP 32953 2955016 YP_072248.1 CDS feoA NC_006155.1 4472252 4472479 D similar to Yersinia pestis YPO0133 feoA; hypothetical ferrous iron transport protein A (100% evalue=4.E-36); Escherichia coli b3408 feoA; ferrous iron transport protein A (77.4% evalue=4.E-24); ferrous iron transport protein A 4472252..4472479 Yersinia pseudotuberculosis IP 32953 2955542 YP_072249.1 CDS feoB NC_006155.1 4472571 4474886 D cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 4472571..4474886 Yersinia pseudotuberculosis IP 32953 2955543 YP_072250.1 CDS YPTB3769 NC_006155.1 4474922 4475179 D similar to Yersinia pestis YPO0131 conserved hypothetical protein (100% evalue=8.E-44); Escherichia coli b3410 yhgG; hypothetical 8.7 kD protein in feoB-bioH intergenic region (O78) (58.2% evalue=4.E-17); hypothetical protein 4474922..4475179 Yersinia pseudotuberculosis IP 32953 2955017 YP_072251.1 CDS YPTB3770 NC_006155.1 4475331 4475600 R similar to Yersinia pestis YPO0130 exported protein (100% evalue=5.E-43); Salmonella typhi STY0095 probable secreted protein (46.5% evalue=1.E-13); hypothetical protein complement(4475331..4475600) Yersinia pseudotuberculosis IP 32953 2955018 YP_072252.1 CDS bioH NC_006155.1 4475770 4476546 R similar to Yersinia pestis YPO0129 bioH; biotin biosynthesis protein (99.2% evalue=1.E-149); Salmonella typhi STY4287 bioH; biotin biosynthesis protein (67.2% evalue=4.E-99); biotin biosynthesis protein complement(4475770..4476546) Yersinia pseudotuberculosis IP 32953 2955291 YP_072253.1 CDS YPTB3772 NC_006155.1 4476633 4477334 D involved in high-affinity gluconate transport; gluconate periplasmic binding protein 4476633..4477334 Yersinia pseudotuberculosis IP 32953 2955019 YP_072254.1 CDS YPTB3773 NC_006155.1 4477394 4477969 D cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 4477394..4477969 Yersinia pseudotuberculosis IP 32953 2955020 YP_072255.1 CDS malQ NC_006155.1 4478154 4480250 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(4478154..4480250) Yersinia pseudotuberculosis IP 32953 2955989 YP_072256.1 CDS YPTB3775 NC_006155.1 4480263 4482668 R similar to Salmonella typhi STY4282 malP; maltodextrin phosphorylase (75.5% evalue=0); Salmonella typhimurium STM3514 malP; maltodextrin phosphorylase (76% evalue=0); maltodextrin phosphorylase complement(4480263..4482668) Yersinia pseudotuberculosis IP 32953 2955021 YP_072257.1 CDS malT NC_006155.1 4482986 4485697 D Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 4482986..4485697 Yersinia pseudotuberculosis IP 32953 2955991 YP_072258.1 CDS glpE NC_006155.1 4486072 4486401 D belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase 4486072..4486401 Yersinia pseudotuberculosis IP 32953 2955022 YP_072259.1 CDS glpG NC_006155.1 4486419 4487255 D protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 4486419..4487255 Yersinia pseudotuberculosis IP 32953 2955711 YP_072260.1 CDS glpR NC_006155.1 4487290 4488048 D represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 4487290..4488048 Yersinia pseudotuberculosis IP 32953 2955714 YP_072261.1 CDS YPTB3780 NC_006155.1 4488517 4488948 R similar to Yersinia pestis YPO3934 hypothetical protein (97.2% evalue=2.E-80); hypothetical protein complement(4488517..4488948) Yersinia pseudotuberculosis IP 32953 2955023 YP_072262.1 CDS YPTB3781 NC_006155.1 4488951 4489415 R similar to Yersinia pestis YPO3935 membrane protein (99.3% evalue=2.E-88); hypothetical protein complement(4488951..4489415) Yersinia pseudotuberculosis IP 32953 2955024 YP_072263.1 CDS glpD NC_006155.1 4490501 4492015 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4490501..4492015 Yersinia pseudotuberculosis IP 32953 2955709 YP_072264.1 CDS glgP NC_006155.1 4492177 4494624 R similar to Yersinia pestis YPO3938 glgP, glgY; glycogen phosphorylase (99.8% evalue=0); Salmonella typhimurium STM3534 glgP; glycogen phosphorylase (80.8% evalue=0); glycogen phosphorylase complement(4492177..4494624) Yersinia pseudotuberculosis IP 32953 2955690 YP_072265.1 CDS glgA NC_006155.1 4494841 4496271 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(4494841..4496271) Yersinia pseudotuberculosis IP 32953 2955687 YP_072266.1 CDS glgC NC_006155.1 4496482 4497768 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(4496482..4497768) Yersinia pseudotuberculosis IP 32953 2955689 YP_072267.1 CDS glgX NC_006155.1 4497778 4499766 R catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein complement(4497778..4499766) Yersinia pseudotuberculosis IP 32953 2955691 YP_072268.1 CDS glgB NC_006155.1 4499768 4501951 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(4499768..4501951) Yersinia pseudotuberculosis IP 32953 2955688 YP_072269.1 CDS YPTB3788 NC_006155.1 4502457 4504154 D similar to Yersinia pestis YPO3943 membrane protein (99.1% evalue=0); Escherichia coli JW2114 yehU, yehV; Hypothetical protein (67.3% evalue=0); hypothetical protein 4502457..4504154 Yersinia pseudotuberculosis IP 32953 2955025 YP_072270.1 CDS YPTB3789 NC_006155.1 4504366 4521237 R similar to Yersinia pestis YPO3944 invasin (76.3% evalue=0); Ig-like domain-containing protein complement(4504366..4521237) Yersinia pseudotuberculosis IP 32953 2955026 YP_072271.1 CDS asd NC_006155.1 4522526 4523629 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(4522526..4523629) Yersinia pseudotuberculosis IP 32953 2955240 YP_072272.1 CDS yhgN NC_006155.1 4523987 4524580 D YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 4523987..4524580 Yersinia pseudotuberculosis IP 32953 2957064 YP_072273.1 CDS YPTB3792 NC_006155.1 4524765 4525154 R similar to Yersinia pestis YPO3951 hypothetical protein (96.8% evalue=3.E-69); Pseudomonas aeruginosa PA0092 hypothetical protein (36.2% evalue=1.E-09); hypothetical protein complement(4524765..4525154) Yersinia pseudotuberculosis IP 32953 2955027 YP_072274.1 CDS YPTB3793 NC_006155.1 4525260 4525652 R similar to Yersinia pestis YPO3951 hypothetical protein (75.3% evalue=3.E-53); Pseudomonas aeruginosa PA0092 hypothetical protein (35.2% evalue=8.E-10); hypothetical protein complement(4525260..4525652) Yersinia pseudotuberculosis IP 32953 2955028 YP_072275.1 CDS YPTB3794 NC_006155.1 4525759 4526148 R similar to Yersinia pestis YPO3951 hypothetical protein (76.7% evalue=8.E-56); Pseudomonas aeruginosa PA0092 hypothetical protein (34.3% evalue=2.E-09); hypothetical protein complement(4525759..4526148) Yersinia pseudotuberculosis IP 32953 2955029 YP_072276.1 CDS YPTB3795 NC_006155.1 4526145 4527395 R similar to Yersinia pestis YPO1258 conserved hypothetical protein (60.7% evalue=1.E-73); hypothetical protein complement(4526145..4527395) Yersinia pseudotuberculosis IP 32953 2955030 YP_072277.1 CDS YPTB3796 NC_006155.1 4527730 4528233 R similar to Yersinia pestis YPO3953 gluconokinase (100% evalue=4.E-93); gluconokinase complement(4527730..4528233) Yersinia pseudotuberculosis IP 32953 2955031 YP_072278.1 CDS gntT NC_006155.1 4528450 4529766 D similar to Yersinia pestis YPO3954 gntT, usgA, gntM; gluconate permease (99.7% evalue=0); Escherichia coli ECs4257 high-affinity transport of gluconate / gluconate permease (85.1% evalue=0); indonate/gluconate permease 4528450..4529766 Yersinia pseudotuberculosis IP 32953 2955735 YP_072279.1 CDS gntR NC_006155.1 4529858 4530853 R similar to Yersinia pestis YPO3955 gntR; gluconate utilization system Gnt-I transcriptional repressor (99.6% evalue=0); Salmonella typhimurium STM3543 gntR; transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) (80% evalue=1.E-151); gluconate utilization system Gnt-I transcriptional repressor complement(4529858..4530853) Yersinia pseudotuberculosis IP 32953 2955734 YP_072280.1 CDS YPTB3799 NC_006155.1 4530961 4531656 R similar to Yersinia pestis YPO3956 conserved hypothetical protein (100% evalue=1.E-136); Salmonella typhimurium STM3544 yhhW; cytoplasmic protein (77.9% evalue=1.E-105); hypothetical protein complement(4530961..4531656) Yersinia pseudotuberculosis IP 32953 2955032 YP_072281.1 CDS YPTB3800 NC_006155.1 4532150 4532419 D similar to Yersinia pestis YPO3957 hypothetical protein, 99% identical; hypothetical protein 4532150..4532419 Yersinia pseudotuberculosis IP 32953 2955033 YP_072282.1 CDS YPTB3801 NC_006155.1 4532419 4533138 D similar to Yersinia pestis YPO3958 response regulator protein (97.5% evalue=1.E-128); Escherichia coli ECs5067 regulatory protein (72% evalue=3.E-93); response regulator protein 4532419..4533138 Yersinia pseudotuberculosis IP 32953 2955034 YP_072283.1 CDS YPTB3802 NC_006155.1 4533213 4534220 R similar to Yersinia pestis YPO3959 PfkB family carbohydrate kinase (99.7% evalue=0); Escherichia coli Z5686 kinase (79.5% evalue=1.E-147); PfkB family carbohydrate kinase complement(4533213..4534220) Yersinia pseudotuberculosis IP 32953 2955035 YP_072284.1 CDS YPTB3803 NC_006155.1 4534230 4535090 R similar to Yersinia pestis YPO3960 class-II fructose-bisphosphate aldolase (100% evalue=1.E-159); Escherichia coli ECs5069 fructose-bisphosphate aldolase (84.9% evalue=1.E-135); hypothetical protein complement(4534230..4535090) Yersinia pseudotuberculosis IP 32953 2955036 YP_072285.1 CDS YPTB3804 NC_006155.1 4535116 4535799 R similar to Yersinia pestis YPO3961 hypothetical protein (99.5% evalue=1.E-136); Escherichia coli Z5688 hypothetical protein (73% evalue=1.E-101); hypothetical protein complement(4535116..4535799) Yersinia pseudotuberculosis IP 32953 2955037 YP_072286.1 CDS YPTB3805 NC_006155.1 4535874 4536818 R similar to Yersinia pestis YPO3962 sugar-binding transport protein (100% evalue=1.E-173); Escherichia coli Z5689 periplasmic ribose-binding protein of ABC transport system (87.5% evalue=1.E-154); ribose ABC transporter substrate-binding protein complement(4535874..4536818) Yersinia pseudotuberculosis IP 32953 2955038 YP_072287.1 CDS YPTB3806 NC_006155.1 4536849 4537841 R similar to Yersinia pestis YPO3963 sugar transport system permease (100% evalue=0); Escherichia coli Z5690 permease of ribose ABC transport system (89.2% evalue=1.E-157); ribose ABC transporter permease complement(4536849..4537841) Yersinia pseudotuberculosis IP 32953 2955039 YP_072288.1 CDS YPTB3807 NC_006155.1 4537834 4539357 R similar to Yersinia pestis YPO3964 sugar transport ATP-binding protein (99.8% evalue=0); Escherichia coli ECs5073 ATP-binding component of sugar ABC transporter (85.3% evalue=0); ribose ABC transporter ATPase complement(4537834..4539357) Yersinia pseudotuberculosis IP 32953 2955040 YP_072289.1 CDS YPTB3808 NC_006155.1 4539546 4542101 D similar to Yersinia pestis YPO3965 hybrid two-component system regulatory protein (99.6% evalue=0); Escherichia coli ECs5074 histidine protein kinase (71.9% evalue=1.E-141); hybrid two-component system regulatory protein 4539546..4542101 Yersinia pseudotuberculosis IP 32953 2955041 YP_072290.1 CDS YPTB3809 NC_006155.1 4542237 4543433 R similar to Yersinia pestis YPO3966 conserved hypothetical protein (99.4% evalue=0); Escherichia coli ECs4364 hypothetical protein (78.8% evalue=0); hypothetical protein complement(4542237..4543433) Yersinia pseudotuberculosis IP 32953 2955042 YP_072291.1 CDS pitA NC_006155.1 4543744 4545240 D similar to Yersinia pestis YPO3967 phosphate transport protein (99.5% evalue=0); Escherichia coli ECs4365 low-affinity phosphate transport (75.5% evalue=0); inorganic phosphate transporter 4543744..4545240 Yersinia pseudotuberculosis IP 32953 2956274 YP_072292.1 CDS uspB NC_006155.1 4545387 4545722 R ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB complement(4545387..4545722) Yersinia pseudotuberculosis IP 32953 2956879 YP_072293.1 CDS uspA NC_006155.1 4546447 4546893 D similar to Yersinia pestis YPO3970 uspA; universal stress protein A (100% evalue=3.E-80); Escherichia coli ECs4367 universal stress protein UspA (93.7% evalue=6.E-73); universal stress protein A 4546447..4546893 Yersinia pseudotuberculosis IP 32953 2956878 YP_072294.1 CDS gdhA NC_006155.1 4547140 4548483 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 4547140..4548483 Yersinia pseudotuberculosis IP 32953 2955683 YP_072295.1 CDS YPTB3814 NC_006155.1 4548727 4550064 D similar to Yersinia pestis YPO3973 metalloprotease (97.9% evalue=0); Pseudomonas aeruginosa PA1249 aprA; alkaline metalloproteinase precursor (47.3% evalue=1.E-80); metalloprotease 4548727..4550064 Yersinia pseudotuberculosis IP 32953 2955043 YP_072296.1 CDS YPTB3815 NC_006155.1 4550129 4550899 R predicted SAM-dependent methyltransferase; methyltransferase complement(4550129..4550899) Yersinia pseudotuberculosis IP 32953 2955044 YP_072297.1 CDS opdA NC_006155.1 4550903 4552945 R similar to Yersinia pestis YPO3975 opdA, prlC; oligopeptidase A (99.5% evalue=0); Escherichia coli b3498 prlC, opdA; oligopeptidase A (80.5% evalue=0); oligopeptidase A complement(4550903..4552945) Yersinia pseudotuberculosis IP 32953 2956194 YP_072298.1 CDS YPTB3817 NC_006155.1 4553274 4554116 D similar to Yersinia pestis YPO3976 conserved hypothetical protein (98.9% evalue=1.E-163); Salmonella typhi STY4206 conserved hypothetical protein (80.3% evalue=1.E-136); hypothetical protein 4553274..4554116 Yersinia pseudotuberculosis IP 32953 2955045 YP_072299.1 CDS gor NC_006155.1 4554269 4555636 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 4554269..4555636 Yersinia pseudotuberculosis IP 32953 2955737 YP_072300.1 CDS YPTB3819 NC_006155.1 4555907 4557034 D similar to Yersinia pestis YPO3978 regulatory protein (97.8% evalue=0); H. influenzae HI0093 hypothetical protein HI0093 (39.2% evalue=2.E-59); regulatory protein 4555907..4557034 Yersinia pseudotuberculosis IP 32953 2955046 YP_072301.1 CDS YPTB3820 NC_006155.1 4557212 4558480 D similar to Yersinia pestis YPO3979 GntP family permease (99.2% evalue=0); Salmonella typhi STY2731 permease (76.3% evalue=0); GntP family symporter 4557212..4558480 Yersinia pseudotuberculosis IP 32953 2955047 YP_072302.1 CDS glxK NC_006155.1 4558491 4559627 D similar to Yersinia pestis YPO3980 glxK; glycerate kinase (99.2% evalue=0); Salmonella typhi STY2730 glycerate kinase (67.6% evalue=1.E-141); glycerate kinase 4558491..4559627 Yersinia pseudotuberculosis IP 32953 2955726 YP_072303.1 CDS YPTB3822 NC_006155.1 4559873 4560373 R similar to Yersinia pestis YPO3982 hypothetical protein (64.4% evalue=3.E-63); hypothetical protein complement(4559873..4560373) Yersinia pseudotuberculosis IP 32953 2955048 YP_072304.1 CDS YPTB3823 NC_006155.1 4560360 4561244 R similar to Yersinia pestis YPO3983 conserved hypothetical protein (83.6% evalue=1.E-142); Xylella fastidiosa XF0155 hypothetical protein (42.5% evalue=2.E-59); hypothetical protein complement(4560360..4561244) Yersinia pseudotuberculosis IP 32953 2955049 YP_072305.1 CDS yapE NC_006155.1 4561332 4564544 R similar to Yersinia pestis YPO3984 yapE; autotransporter protein (97.3% evalue=0); Agrobacterium tumefaciens AGR_pAT_511 BapA protein (24.3% evalue=2.E-46); pertactin family virulence factor/autotransporter complement(4561332..4564544) Yersinia pseudotuberculosis IP 32953 2956949 YP_072306.1 CDS YPTB3825 NC_006155.1 4565222 4566304 D similar to Yersinia pestis YPO3985 membrane protein (98.6% evalue=0); Escherichia coli Z4935 yhjD; orf, hypothetical protein (69.8% evalue=1.E-121); hypothetical protein 4565222..4566304 Yersinia pseudotuberculosis IP 32953 2955050 YP_072307.1 CDS cdh NC_006155.1 4566308 4567105 D similar to Yersinia pestis YPO3986 cdh; CDP-diacylglycerol pyrophosphatase (97.6% evalue=1.E-146); Escherichia coli JW3889 cdh; CDP diacylglycerol pyrophosphatase (version 1) (51.6% evalue=3.E-69); CDP-diacylglycerol pyrophosphatase 4566308..4567105 Yersinia pseudotuberculosis IP 32953 2955315 YP_072308.1 CDS YPTB3827 NC_006155.1 4567110 4569323 R similar to Yersinia pestis YPO3987 exported protein (96.1% evalue=0); Pseudomonas aeruginosa PA4879 conserved hypothetical protein (50.7% evalue=0); hypothetical protein complement(4567110..4569323) Yersinia pseudotuberculosis IP 32953 2955051 YP_072309.1 CDS YPTB3828 NC_006155.1 4569628 4570473 R in Escherichia coli this protein is involved in flagellar function; diguanylate phosphodiesterase complement(4569628..4570473) Yersinia pseudotuberculosis IP 32953 2955052 YP_072310.1 CDS YPTB3829 NC_006155.1 4570557 4570892 D similar to Yersinia pestis YPO3989 tautomerase (100% evalue=4.E-31); Neisseria meningitidis_A NMA1685 tautomerase (68.1% evalue=5.E-19); tautomerase enzyme 4570557..4570892 Yersinia pseudotuberculosis IP 32953 2955053 YP_072311.1 CDS kdgK NC_006155.1 4571171 4572115 D similar to Yersinia pestis YPO3990 kdgK; 2-dehydro-3-deoxygluconokinase (99.6% evalue=1.E-179); Salmonella typhimurium STM3612 kdgK; ketodeoxygluconokinase (74.5% evalue=1.E-131); 2-dehydro-3-deoxygluconokinase 4571171..4572115 Yersinia pseudotuberculosis IP 32953 2955911 YP_072312.1 CDS YPTB3831 NC_006155.1 4572279 4573778 R similar to Yersinia pestis YPO3991 insulinase family protease (100% evalue=0); Escherichia coli JW3495 yhjJ; Hypothetical protein (62.1% evalue=1.E-178); insulinase family protease complement(4572279..4573778) Yersinia pseudotuberculosis IP 32953 2955054 YP_072313.1 CDS dctA NC_006155.1 4574143 4575432 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(4574143..4575432) Yersinia pseudotuberculosis IP 32953 2955434 YP_072314.1 CDS YPTB3833 NC_006155.1 4575904 4576410 R similar to Yersinia pestis YPO3993 exported protein (99.3% evalue=2.E-85); hypothetical protein complement(4575904..4576410) Yersinia pseudotuberculosis IP 32953 2955055 YP_072315.1 CDS pelY NC_006155.1 4576508 4578226 R similar to Yersinia pestis YPO3994 pelY; periplasmic pectate lyase precursor (100% evalue=0); periplasmic pectate lyase complement(4576508..4578226) Yersinia pseudotuberculosis IP 32953 2956229 YP_072316.1 CDS YPTB3835 NC_006155.1 4578472 4579176 R similar to Yersinia pestis YPO3995 exported protein (100% evalue=1.E-134); KdgM family oligogalacturonate specific porin complement(4578472..4579176) Yersinia pseudotuberculosis IP 32953 2955056 YP_072317.1 CDS yhjK NC_006155.1 4579817 4582003 R HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; biofilm formation regulator HmsP complement(4579817..4582003) Yersinia pseudotuberculosis IP 32953 2957069 YP_072318.1 CDS YPTB3837 NC_006155.1 4582146 4583261 R catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase complement(4582146..4583261) Yersinia pseudotuberculosis IP 32953 2955057 YP_072319.1 CDS dppF NC_006155.1 4583379 4584455 R Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit complement(4583379..4584455) Yersinia pseudotuberculosis IP 32953 2955483 YP_072320.2 CDS dppD NC_006155.1 4584452 4585432 R DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit complement(4584452..4585432) Yersinia pseudotuberculosis IP 32953 2955482 YP_072321.1 CDS dppC NC_006155.1 4585446 4586348 R similar to Yersinia pestis YPO4001 dppC; dipeptide transport system permease (100% evalue=1.E-168); Salmonella typhimurium STM3628 dppC; ABC superfamily (membrane), dipeptide transport protein 2 (87.3% evalue=1.E-150); dipeptide transporter complement(4585446..4586348) Yersinia pseudotuberculosis IP 32953 2955481 YP_072322.1 CDS dppB NC_006155.1 4586359 4587378 R transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB complement(4586359..4587378) Yersinia pseudotuberculosis IP 32953 2955480 YP_072323.1 CDS dppA NC_006155.1 4587661 4589268 R similar to Yersinia pestis YPO4003 dppA; periplasmic dipeptide transport protein (99.8% evalue=0); Salmonella typhi STY4168 dppA; periplasmic dipeptide transport protein precursor (85.9% evalue=0); dipeptide ABC transporter substrate-binding protein complement(4587661..4589268) Yersinia pseudotuberculosis IP 32953 2955479 YP_072324.1 CDS YPTB3843 NC_006155.1 4589937 4591700 R similar to Yersinia pestis YPO4005 hemolysin activator protein (98.9% evalue=0); TPS family hemolysin activator/secretion protein complement(4589937..4591700) Yersinia pseudotuberculosis IP 32953 2955058 YP_072325.1 CDS YPTB3844 NC_006155.1 4591809 4593200 R similar to Yersinia pestis YPO4006 exported protein (99.5% evalue=0); hemagglutinin/hemolysin-related protein complement(4591809..4593200) Yersinia pseudotuberculosis IP 32953 2955059 YP_072326.1 CDS uhpC NC_006155.1 4593705 4595036 R membrane protein regulates uhpT expression; regulatory protein UhpC complement(4593705..4595036) Yersinia pseudotuberculosis IP 32953 2956866 YP_072327.1 CDS uhpB NC_006155.1 4595131 4596660 R Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB complement(4595131..4596660) Yersinia pseudotuberculosis IP 32953 2956865 YP_072328.1 CDS uhpA NC_006155.1 4596657 4597247 R similar to Yersinia pestis YPO4012 uhpA; two-component system response regulator (100% evalue=1.E-105); Escherichia coli Z5159 uhpA; response regulator, positive activator of uhpT transcription (sensor, uhpB) (66.4% evalue=6.E-67); two-component system response regulator complement(4596657..4597247) Yersinia pseudotuberculosis IP 32953 2956864 YP_072329.1 CDS yhjW NC_006155.1 4597363 4599054 R catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase complement(4597363..4599054) Yersinia pseudotuberculosis IP 32953 2957070 YP_072330.1 CDS YPTB3849 NC_006155.1 4599583 4601046 R similar to Yersinia pestis YPO4014 membrane protein (100% evalue=0); hypothetical protein complement(4599583..4601046) Yersinia pseudotuberculosis IP 32953 2955060 YP_072331.1 CDS hutT NC_006155.1 4601525 4602928 R similar to Yersinia pestis YPO4015 amino acid permease (99.3% evalue=0); Pseudomonas aeruginosa PA5097 glycine betaine/proline transport system permease (73.2% evalue=0); APC family histidine permease complement(4601525..4602928) Yersinia pseudotuberculosis IP 32953 2955855 YP_072332.1 CDS hutH NC_006155.1 4603314 4604846 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(4603314..4604846) Yersinia pseudotuberculosis IP 32953 2955853 YP_072333.1 CDS hutU NC_006155.1 4604843 4606534 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(4604843..4606534) Yersinia pseudotuberculosis IP 32953 2955856 YP_072334.1 CDS YPTB3855 NC_006155.1 4608208 4609137 D similar to Yersinia pestis YPO4020 membrane protein (100% evalue=1.E-170); hypothetical protein 4608208..4609137 Yersinia pseudotuberculosis IP 32953 2955062 YP_072335.1 CDS YPTB3856 NC_006155.1 4609139 4610383 D Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism; hypothetical protein 4609139..4610383 Yersinia pseudotuberculosis IP 32953 2955063 YP_072336.1 CDS YPTB3857 NC_006155.1 4610906 4611859 D similar to Yersinia pestis YPO4022 iron transport protein (100% evalue=1.E-177); Brucella melitensis BMEII0607 ferric anguibactin-binding protein (48% evalue=6.E-72); iron siderophore (ferrichrome) ABC transporter substrate-binding protein 4610906..4611859 Yersinia pseudotuberculosis IP 32953 2955064 YP_072337.1 CDS YPTB3858 NC_006155.1 4611869 4612828 D similar to Yersinia pestis YPO4023 iron transport permease (99.6% evalue=1.E-174); Agrobacterium tumefaciens Atu2474 ABC transporter, membrane spanning protein (53.8% evalue=1.E-100); iron siderophore ABC transporter permease 4611869..4612828 Yersinia pseudotuberculosis IP 32953 2955065 YP_072338.1 CDS YPTB3859 NC_006155.1 4612818 4613825 D similar to Yersinia pestis YPO4024 iron transport permease (99.7% evalue=1.E-180); Brucella melitensis BMEII0605 ferric anguibactin transport system permease FatC (52.1% evalue=2.E-83); iron siderophore ABC transporter permease 4612818..4613825 Yersinia pseudotuberculosis IP 32953 2955066 YP_072339.1 CDS YPTB3860 NC_006155.1 4613822 4614580 D similar to Yersinia pestis YPO4025 iron ABC transporter, ATP-binding protein (98.8% evalue=1.E-138); Brucella melitensis BMEII0604 iron(III) dicitrate transport ATP-binding protein FecE (63.3% evalue=2.E-89); iron siderophore ABC transporter ATP-binding protein 4613822..4614580 Yersinia pseudotuberculosis IP 32953 2955067 YP_072340.1 CDS YPTB3862 NC_006155.1 4615019 4615345 R similar to Salmonella typhi STY4036 DNA-binding protein (43.5% evalue=4.E-12); Salmonella typhimurium STM3755 rhuM; cytoplasmic protein (68.5% evalue=1.E-32); hypothetical protein complement(4615019..4615345) Yersinia pseudotuberculosis IP 32953 2955069 YP_072341.1 CDS YPTB3863 NC_006155.1 4615368 4615775 R hypothetical protein complement(4615368..4615775) Yersinia pseudotuberculosis IP 32953 2955070 YP_072342.1 CDS YPTB3864 NC_006155.1 4616010 4616282 R similar to Yersinia pestis YPO4033 phage integrase (97.1% evalue=2.E-32); Escherichia coli ECs0289 integrase (68.1% evalue=1.E-22); phage integrase (partial) complement(4616010..4616282) Yersinia pseudotuberculosis IP 32953 2955071 YP_072343.1 CDS YPTB3865 NC_006155.1 4616645 4617502 R similar to Escherichia coli Z1664 unknown (61.1% evalue=3.E-97); Escherichia coli Z1226 unknown (61.1% evalue=3.E-97); hypothetical protein complement(4616645..4617502) Yersinia pseudotuberculosis IP 32953 2955072 YP_072344.1 CDS ypjF NC_006155.1 4617726 4618190 R similar to Escherichia coli b2646 ypjF; hypothetical 12.3 kD protein in alpA-gabD intergenic region (67.3% evalue=2.E-34); Escherichia coli JW2627 ypjF; Hypothetical protein (67.3% evalue=2.E-34); hypothetical protein complement(4617726..4618190) Yersinia pseudotuberculosis IP 32953 2957105 YP_072345.1 CDS yagB NC_006155.1 4618147 4618482 R similar to Escherichia coli b0266 yagB; hypothetical 13.2 kD protein in perR-argF intergenic region (74.7% evalue=5.E-38); Escherichia coli JW0259 yagB; Hypothetical protein (74.7% evalue=5.E-38); hypothetical protein complement(4618147..4618482) Yersinia pseudotuberculosis IP 32953 2956937 YP_072346.1 CDS yfjY NC_006155.1 4618494 4618973 R similar to Escherichia coli b2644 yfjY; hypothetical 18.0 kD protein in alpA-gabD intergenic region (61.6% evalue=9.E-50); Escherichia coli JW2625 yfjY, yfjZ; Hypothetical protein (o160) (61.6% evalue=9.E-50); hypothetical protein complement(4618494..4618973) Yersinia pseudotuberculosis IP 32953 2957039 YP_072347.1 CDS YPTB3869 NC_006155.1 4619156 4619776 R hypothetical protein complement(4619156..4619776) Yersinia pseudotuberculosis IP 32953 2955073 YP_072348.1 CDS YPTB3870 NC_006155.1 4619804 4620358 R hypothetical protein complement(4619804..4620358) Yersinia pseudotuberculosis IP 32953 2955074 YP_072349.1 CDS YPTB3871 NC_006155.1 4620606 4621238 R similar to Escherichia coli ECs1395 hypothetical protein (40.8% evalue=1.E-34); Escherichia coli Z1650 unknown (40.8% evalue=1.E-34); hypothetical protein complement(4620606..4621238) Yersinia pseudotuberculosis IP 32953 2955075 YP_072350.1 CDS YPTB3872 NC_006155.1 4621286 4621615 R similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (55.2% evalue=6.E-22); IS100 transposase complement(4621286..4621615) Yersinia pseudotuberculosis IP 32953 2955076 YP_072351.1 CDS yagK NC_006155.1 4622244 4622864 D similar to Escherichia coli b0277 yagK; hypothetical 24.5 kD protein in argF-intf intergenic region (33.1% evalue=1.E-23); Escherichia coli JW0271 yagK; Hypothetical protein (o208) (33.1% evalue=1.E-23); hypothetical protein 4622244..4622864 Yersinia pseudotuberculosis IP 32953 2956938 YP_072352.1 CDS YPTB3875 NC_006155.1 4623749 4624771 D similar to Yersinia pestis YPO3591 transposase for insertion sequence IS100 (100% evalue=0); transposase 4623749..4624771 Yersinia pseudotuberculosis IP 32953 2955078 YP_072353.1 CDS YPTB3876 NC_006155.1 4624771 4625550 D similar to Yersinia pestis YPO3592 insertion sequence IS100, ATP-binding protein (100% evalue=1.E-142); transposase/IS protein 4624771..4625550 Yersinia pseudotuberculosis IP 32953 2955079 YP_072354.1 CDS YPTB3878 NC_006155.1 4626056 4626793 R similar to Clostridium acetobutylicum CAC0328 predicted metal-dependent hydrolase (30.4% evalue=2.E-24); Brucella melitensis BMEII0448 zinc metallopeptidases (34.3% evalue=3.E-32); metal-dependent hydrolase complement(4626056..4626793) Yersinia pseudotuberculosis IP 32953 2955081 YP_072355.1 CDS YPTB3879 NC_006155.1 4626797 4630075 R similar to Methanocaldococcus jannaschii MJECL40 type I restriction enzyme, R subunit (28.3% evalue=4.E-76); Brucella melitensis BMEII0449 type I restriction-modification system restriction subunit (30.8% evalue=2.E-88); type I restriction enzyme restriction subunit complement(4626797..4630075) Yersinia pseudotuberculosis IP 32953 2955082 YP_072356.1 CDS YPTB3880 NC_006155.1 4630072 4631118 R similar to Salmonella typhi STY4036 DNA-binding protein (78.7% evalue=1.E-146); Salmonella typhimurium STM3755 rhuM; cytoplasmic protein (77.9% evalue=1.E-154); hypothetical protein complement(4630072..4631118) Yersinia pseudotuberculosis IP 32953 2955083 YP_072357.1 CDS YPTB3881 NC_006155.1 4631115 4632344 R similar to Salmonella typhimurium STM4524 hsdS; specificity determinant for hsdM and hsdR (35.9% evalue=3.E-26); C. jejuni Cj1051c restriction modification enzyme (35.2% evalue=3.E-33); restriction modification enzyme complement(4631115..4632344) Yersinia pseudotuberculosis IP 32953 2955084 YP_072358.1 CDS hsdM NC_006155.1 4632334 4633857 R similar to Staphylococcus aureus_N315 SA0391 hsdM; probable type I site-specific deoxyribonuclease [Pathogenicity island SaPIn2] (38.2% evalue=4.E-95); Brucella melitensis BMEII0451 type I restriction-modification system methylation subunit (39.3% evalue=5.E-98); type I site-specific deoxyribonuclease LldI complement(4632334..4633857) Yersinia pseudotuberculosis IP 32953 2955838 YP_072359.1 CDS YPTB3883 NC_006155.1 4633864 4634442 R hypothetical protein complement(4633864..4634442) Yersinia pseudotuberculosis IP 32953 2955085 YP_072360.1 CDS MJL12.14 NC_006155.1 4634660 4635574 D similar to Salmonella typhi STY2056 transposase (100% evalue=1.E-177); A. thalianan At1g47875 T2E6.26; transposase (100% evalue=1.E-177); hypothetical protein 4634660..4635574 Yersinia pseudotuberculosis IP 32953 2956048 YP_072361.1 CDS YPTB3885 NC_006155.1 4635877 4636101 R SinR-like protein complement(4635877..4636101) Yersinia pseudotuberculosis IP 32953 2955086 YP_072362.1 CDS YPTB3886 NC_006155.1 4636419 4637633 R similar to Escherichia coli ECs4534 integrase (82.2% evalue=0); Escherichia coli Z5087 intL; integrase for prophage 933L and the LEE pathogenicity island (82.2% evalue=0); integrase complement(4636419..4637633) Yersinia pseudotuberculosis IP 32953 2955087 YP_072363.1 CDS YPTB3887 NC_006155.1 4638102 4639295 R similar to Yersinia pestis YPO4034 AraC-family transcriptional regulatory protein (100% evalue=0); Escherichia coli ECs4452 regulator of xyl operon (79.4% evalue=0); AraC family transcriptional regulator complement(4638102..4639295) Yersinia pseudotuberculosis IP 32953 2955088 YP_072364.1 CDS xylH NC_006155.1 4639385 4640569 R similar to Yersinia pestis YPO4035 sugar transport system permease (100% evalue=0); Escherichia coli ECs4451 membrane component of xylose transport system (84.5% evalue=0); xylose ABC transporter permease complement(4639385..4640569) Yersinia pseudotuberculosis IP 32953 2956915 YP_072365.1 CDS xylG NC_006155.1 4640556 4642088 R with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit complement(4640556..4642088) Yersinia pseudotuberculosis IP 32953 2956914 YP_072366.1 CDS xylF NC_006155.1 4642296 4643291 R periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF complement(4642296..4643291) Yersinia pseudotuberculosis IP 32953 2955089 YP_072367.1 CDS xylA NC_006155.1 4643754 4645073 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 4643754..4645073 Yersinia pseudotuberculosis IP 32953 2956912 YP_072368.1 CDS xylB NC_006155.1 4645197 4646651 D similar to Yersinia pestis YPO4039 xylB; xylulose kinase (99.7% evalue=0); Escherichia coli ECs4447 xylulokinase (71.9% evalue=0); xylulose kinase 4645197..4646651 Yersinia pseudotuberculosis IP 32953 2956913 YP_072369.1 CDS YPTB3893 NC_006155.1 4646731 4647717 R similar to Yersinia pestis YPO4040 exported protein (99.3% evalue=0); Escherichia coli JW0706 ybgO; Hypothetical protein (31.8% evalue=1.E-38); hypothetical protein complement(4646731..4647717) Yersinia pseudotuberculosis IP 32953 2955090 YP_072370.1 CDS YPTB3894 NC_006155.1 4647756 4648523 R similar to Yersinia pestis YPO4041 fimbrial chaperone (99.6% evalue=1.E-145); Escherichia coli Z0869 ybgP; chaperone (47.4% evalue=7.E-61); fimbrial chaperone complement(4647756..4648523) Yersinia pseudotuberculosis IP 32953 2955091 YP_072371.1 CDS yqiG NC_006155.1 4648616 4651114 R similar to Salmonella typhi STY3176 stdB; probable outer membrane fimbrial usher protein (46.9% evalue=0); Salmonella typhimurium STM3028 stdB; outer membrane usher protein (46.8% evalue=0); outer membrane fimbrial usher porin complement(4648616..4651114) Yersinia pseudotuberculosis IP 32953 2957112 YP_072372.1 CDS YPTB3896 NC_006155.1 4651190 4651747 R similar to Yersinia pestis YPO4044 fimbrial protein (100% evalue=3.E-98); Salmonella typhimurium STM3029 stdA; fimbrial-like protein (37% evalue=5.E-22); fimbrial protein complement(4651190..4651747) Yersinia pseudotuberculosis IP 32953 2955092 YP_072373.1 CDS YPTB3897 NC_006155.1 4652629 4653621 R similar to Yersinia pestis YPO4045 membrane protein (99.6% evalue=0); Salmonella typhimurium STM3658 yiaH; inner membrane protein (58.9% evalue=1.E-109); hypothetical protein complement(4652629..4653621) Yersinia pseudotuberculosis IP 32953 2955093 YP_072374.1 CDS YPTB3898 NC_006155.1 4653852 4654496 D similar to Yersinia pestis YPO0996 insertion element IS1661 DNA-binding protein (100% evalue=1.E-101); IS1661 DNA-binding protein 4653852..4654496 Yersinia pseudotuberculosis IP 32953 2955094 YP_072375.1 CDS YPTB3899 NC_006155.1 4654550 4655335 D similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.2% evalue=1.E-149); IS1661 transposase 4654550..4655335 Yersinia pseudotuberculosis IP 32953 2955095 YP_072376.1 CDS YPTB3900 NC_006155.1 4655494 4656447 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(4655494..4656447) Yersinia pseudotuberculosis IP 32953 2955096 YP_072377.1 CDS YPTB3901 NC_006155.1 4656441 4657403 R similar to Yersinia pestis YPO4089 pyridoxal-phosphate dependent enzyme (99.6% evalue=1.E-179); Thermotoga maritima TM0356 threonine dehydratase catabolic (44.1% evalue=4.E-61); hypothetical protein complement(4656441..4657403) Yersinia pseudotuberculosis IP 32953 2955097 YP_072378.1 CDS yidR NC_006155.1 4657611 4658912 D similar to Salmonella typhi STY3967 yidR; ATP/GTP-binding protein (62.1% evalue=1.E-151); Salmonella typhimurium STM3811 yidR; cytoplasmic protein (62.1% evalue=1.E-151); hypothetical protein 4657611..4658912 Yersinia pseudotuberculosis IP 32953 2957077 YP_072379.1 CDS YPTB3903 NC_006155.1 4658955 4659290 R similar to Yersinia pestis YPO4086 lipoprotein (97.2% evalue=9.E-58); Escherichia coli b3688 yidQ; hypothetical 14.8 kD protein in ibpA-gyrB intergenic region (43.2% evalue=1.E-19); hypothetical protein complement(4658955..4659290) Yersinia pseudotuberculosis IP 32953 2955098 YP_072380.1 CDS ibpA NC_006155.1 4659658 4660071 D with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 4659658..4660071 Yersinia pseudotuberculosis IP 32953 2955860 YP_072381.1 CDS ibpB NC_006155.1 4660352 4660816 D 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 4660352..4660816 Yersinia pseudotuberculosis IP 32953 2955861 YP_072382.1 CDS yidE NC_006155.1 4661189 4662847 D similar to Yersinia pestis YPO4083 yidE; membrane protein (99.8% evalue=0); Salmonella typhimurium STM3807 yidE; paral transport protein (75.8% evalue=0); hypothetical protein 4661189..4662847 Yersinia pseudotuberculosis IP 32953 2957076 YP_072383.2 CDS avtA NC_006155.1 4662960 4664225 R transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase complement(4662960..4664225) Yersinia pseudotuberculosis IP 32953 2955267 YP_072384.1 CDS YPTB3908 NC_006155.1 4664681 4665124 R similar to Yersinia pestis YPO4081 membrane protein (99.3% evalue=2.E-76); hypothetical protein complement(4664681..4665124) Yersinia pseudotuberculosis IP 32953 2955099 YP_072385.1 CDS malS NC_006155.1 4665529 4667592 R periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase complement(4665529..4667592) Yersinia pseudotuberculosis IP 32953 2955990 YP_072386.1 CDS YPTB3910 NC_006155.1 4667900 4668880 R Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase complement(4667900..4668880) Yersinia pseudotuberculosis IP 32953 2955100 YP_072387.1 CDS YPTB3911 NC_006155.1 4669417 4670061 D similar to Yersinia pestis YPO4077 conserved hypothetical protein (99.5% evalue=1.E-118); Vibrio cholerae VC2666 conserved hypothetical protein (39.6% evalue=4.E-33); hypothetical protein 4669417..4670061 Yersinia pseudotuberculosis IP 32953 2955101 YP_072388.1 CDS yiaD NC_006155.1 4670192 4670851 R similar to Yersinia pestis YPO4076 yiaD; lipoprotein (100% evalue=1.E-118); Salmonella typhimurium STM3645 yiaD; outer membrane lipoprotein (79.4% evalue=7.E-93); outer membrane lipoprotein complement(4670192..4670851) Yersinia pseudotuberculosis IP 32953 2957071 YP_072389.1 CDS YPTB3913 NC_006155.1 4671210 4671665 R similar to Yersinia pestis YPO4075 acetyltransferase (97.3% evalue=4.E-84); Salmonella typhi STY4159 yiaC; acetyltransferase (46.9% evalue=4.E-35); hypothetical protein complement(4671210..4671665) Yersinia pseudotuberculosis IP 32953 2955102 YP_072390.1 CDS tag NC_006155.1 4671662 4672234 R similar to Yersinia pestis YPO4074 tag; DNA-3-methyladenine glycosylase (100% evalue=1.E-112); Escherichia coli JW3518 tag; DNA-3-methyladenine glycosidase I (3-methyladenine-dna glycosylase I (69.7% evalue=5.E-75); DNA-3-methyladenine glycosylase complement(4671662..4672234) Yersinia pseudotuberculosis IP 32953 2956656 YP_072391.1 CDS glyQ NC_006155.1 4672581 4673495 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 4672581..4673495 Yersinia pseudotuberculosis IP 32953 2955728 YP_072392.1 CDS glyS NC_006155.1 4673505 4675574 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 4673505..4675574 Yersinia pseudotuberculosis IP 32953 2955729 YP_072393.1 CDS yiaF NC_006155.1 4676041 4676766 D similar to Yersinia pestis YPO4070 yiaF; exported protein (99.1% evalue=1.E-130); Salmonella typhimurium STM3647 yiaF; outer membrane lipoprotein (52.1% evalue=2.E-62); hypothetical protein 4676041..4676766 Yersinia pseudotuberculosis IP 32953 2957072 YP_072394.1 CDS mtlA NC_006155.1 4677416 4679347 D similar to Yersinia pestis YPO4068 mtlA; PTS system, mannitol-specific IIABC component (99.8% evalue=0); Salmonella typhi STY4111 mtlA; mannitol-specific enzyme II of phosphotransferase system (82.4% evalue=0); PTS system mannitol-specific transporter subunit IIABC 4677416..4679347 Yersinia pseudotuberculosis IP 32953 2956089 YP_072395.1 CDS mtlD NC_006155.1 4679484 4680647 D similar to Yersinia pestis YPO4067 mtlD; mannitol-1-phosphate 5-dehydrogenase (98.9% evalue=0); Escherichia coli ECs4476 mannitol-1-phosphate dehydrogenase (76.1% evalue=1.E-160); mannitol-1-phosphate 5-dehydrogenase 4679484..4680647 Yersinia pseudotuberculosis IP 32953 2956090 YP_072396.1 CDS mtlR NC_006155.1 4680854 4681408 D Acts as a repressor of the mtlAD operon; mannitol repressor protein 4680854..4681408 Yersinia pseudotuberculosis IP 32953 2956092 YP_072397.1 CDS YPTB3921 NC_006155.1 4681657 4682013 D similar to Yersinia pestis YPO4065 conserved hypothetical protein (100% evalue=2.E-60); Salmonella typhimurium STM3689 yibL; cytoplasmic protein (62.9% evalue=6.E-33); hypothetical protein 4681657..4682013 Yersinia pseudotuberculosis IP 32953 2955103 YP_072398.1 CDS YPTB3922 NC_006155.1 4682178 4682654 R similar to Yersinia pestis YPO4064 hypothetical protein (100% evalue=2.E-83); hypothetical protein complement(4682178..4682654) Yersinia pseudotuberculosis IP 32953 2955104 YP_072399.1 CDS YPTB3923 NC_006155.1 4683188 4683520 R similar to Yersinia pestis YPO4063 membrane protein (99% evalue=4.E-58); Salmonella typhi STY0296 hypothetical protein (32.9% evalue=1.E-11); hypothetical protein complement(4683188..4683520) Yersinia pseudotuberculosis IP 32953 2955105 YP_072400.1 CDS tar NC_006155.1 4683710 4685659 R similar to Yersinia pestis YPO4062 tar, cheM; methyl-accepting chemotaxis protein II (99.6% evalue=0); Salmonella typhimurium STM1919 cheM; methyl accepting chemotaxis protein II, aspartate sensor-receptor (45.9% evalue=1.E-101); methyl-accepting chemotaxis protein II complement(4683710..4685659) Yersinia pseudotuberculosis IP 32953 2956660 YP_072401.1 CDS sodA NC_006155.1 4686003 4686626 R Mn; SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase complement(4686003..4686626) Yersinia pseudotuberculosis IP 32953 2956618 YP_072402.1 CDS fdhD NC_006155.1 4687079 4687903 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(4687079..4687903) Yersinia pseudotuberculosis IP 32953 2955534 YP_072403.1 CDS fdoG NC_006155.1 4688100 4691147 D similar to Salmonella typhi STY3839 fdoG; formate dehydrogenase-O, major subunit (84.9% evalue=0); Salmonella typhimurium STM4037 fdoG; formate dehydrogenase (84.5% evalue=0) opal codon at position 4688685-7 for selenocysteine, same as in Escherichia coli; selenocysteine tRNA i; formate dehydrogenase-O major subunit 4688100..4691147 Yersinia pseudotuberculosis IP 32953 2955537 YP_072404.1 CDS fdoH NC_006155.1 4691160 4692131 D similar to Yersinia pestis YPO4057 fdoH; formate dehydrogenase-O, iron-sulfur subunit (100% evalue=0); Salmonella typhimurium STM4036 fdoH; formate dehydrogenase-O, Fe-S subunit (86.3% evalue=1.E-154); formate dehydrogenase-O, iron-sulfur subunit 4691160..4692131 Yersinia pseudotuberculosis IP 32953 2955538 YP_072405.1 CDS fdoI NC_006155.1 4692128 4692802 D cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 4692128..4692802 Yersinia pseudotuberculosis IP 32953 2955539 YP_072406.1 CDS fdhE NC_006155.1 4692802 4693731 D required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 4692802..4693731 Yersinia pseudotuberculosis IP 32953 2955535 YP_072407.1 CDS selA NC_006155.1 4693927 4695315 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 4693927..4695315 Yersinia pseudotuberculosis IP 32953 2956589 YP_072408.1 CDS selB NC_006155.1 4695312 4697285 D similar to Pasteurella multocida PM1766 selB; selenocysteine-specific elongation factor (45.5% evalue=1.E-152); Escherichia coli Z5011 selB; selenocysteinyl-tRNA-specific translation factor (58.5% evalue=0); selenocysteinyl-tRNA-specific translation factor 4695312..4697285 Yersinia pseudotuberculosis IP 32953 2956590 YP_072409.1 CDS YPTB3934 NC_006155.1 4698045 4698377 D similar to Yersinia pestis YPO4050 membrane protein (97.2% evalue=2.E-57); hypothetical protein 4698045..4698377 Yersinia pseudotuberculosis IP 32953 2955106 YP_072410.1 CDS YPTB3935 NC_006155.1 4698391 4698972 R similar to Yersinia pestis YPO4049 membrane protein (99.4% evalue=1.E-105); hypothetical protein complement(4698391..4698972) Yersinia pseudotuberculosis IP 32953 2955107 YP_072411.1 CDS mdfA NC_006155.1 4699682 4700911 R similar to Yersinia pestis YPO4048 mdfA, cmr; multidrug translocase (100% evalue=0); Escherichia coli JW0826 mdfA; Multidrag translocase (chloramphenicol resistance pump CMR) (73% evalue=1.E-167); major facilitator superfamily multidrug translocase complement(4699682..4700911) Yersinia pseudotuberculosis IP 32953 2956005 YP_072412.1 CDS YPTB3937 NC_006155.1 4701470 4702255 R similar to Yersinia pestis YPO3932 transposase for insertion sequence IS1661 (99.6% evalue=1.E-150); IS1661 transposase complement(4701470..4702255) Yersinia pseudotuberculosis IP 32953 2955108 YP_072413.1 CDS YPTB3938 NC_006155.1 4702309 4702953 R similar to Yersinia pestis YPO0996 insertion element IS1661 DNA-binding protein (100% evalue=1.E-101); IS1661 DNA-binding protein complement(4702309..4702953) Yersinia pseudotuberculosis IP 32953 2955109 YP_072414.1 CDS YPTB3939 NC_006155.1 4703437 4704246 R YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase complement(4703437..4704246) Yersinia pseudotuberculosis IP 32953 2955110 YP_072415.1 CDS gyrB NC_006155.1 4704462 4706876 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(4704462..4706876) Yersinia pseudotuberculosis IP 32953 2955767 YP_072416.2 CDS recF NC_006155.1 4706896 4707981 R Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F complement(4706896..4707981) Yersinia pseudotuberculosis IP 32953 2956416 YP_072417.1 CDS dnaN NC_006155.1 4708154 4709254 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(4708154..4709254) Yersinia pseudotuberculosis IP 32953 2955476 YP_072418.1 CDS dnaA NC_006155.1 4709259 4710647 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA complement(4709259..4710647) Yersinia pseudotuberculosis IP 32953 2955470 YP_072419.1 CDS YPTB3944 NC_006155.1 4710771 4710980 D similar to Yersinia pestis YPO4098 hypothetical protein, 100% identical.; hypothetical protein 4710771..4710980 Yersinia pseudotuberculosis IP 32953 2955111 YP_072420.1 CDS rpmH NC_006155.1 4711363 4711503 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4711363..4711503 Yersinia pseudotuberculosis IP 32953 2956517 YP_072421.1 CDS rnpA NC_006155.1 4711522 4711881 D protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4711522..4711881 Yersinia pseudotuberculosis IP 32953 2956473 YP_072422.1 CDS YPTB3947 NC_006155.1 4711845 4712102 D similar to Salmonella typhimurium STM3841 inner membrane protein (80% evalue=5.E-35); Escherichia coli JW3682 yidD; Hypothetical protein (80% evalue=5.E-35); hypothetical protein 4711845..4712102 Yersinia pseudotuberculosis IP 32953 2955112 YP_072423.1 CDS yidC NC_006155.1 4712105 4713745 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 4712105..4713745 Yersinia pseudotuberculosis IP 32953 2957075 YP_072424.1 CDS trmE NC_006155.1 4713888 4715252 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4713888..4715252 Yersinia pseudotuberculosis IP 32953 2956687 YP_072425.1 CDS YPTB3950 NC_006155.1 4715459 4716658 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 4715459..4716658 Yersinia pseudotuberculosis IP 32953 2955113 YP_072426.1 CDS YPTB3951 NC_006155.1 4717127 4717408 R similar to Yersinia pestis YPO4105 exported protein (97.8% evalue=2.E-42); hypothetical protein complement(4717127..4717408) Yersinia pseudotuberculosis IP 32953 2955114 YP_072427.1 CDS YPTB3952 NC_006155.1 4717470 4718090 R similar to Yersinia pestis YPO4106 hypothetical protein (99.5% evalue=1.E-115); hypothetical protein complement(4717470..4718090) Yersinia pseudotuberculosis IP 32953 2955115 YP_072428.1 CDS yieG NC_006155.1 4718635 4720020 R similar to Yersinia pestis YPO4107 yieG; Xanthine/uracil permeases family protein (100% evalue=0); Salmonella typhimurium STM3851 yieG; xanthine/uracil permeases family (86.8% evalue=0); xanthine/uracil permease family protein complement(4718635..4720020) Yersinia pseudotuberculosis IP 32953 2957078 YP_072429.1 CDS YPTB3954 NC_006155.1 4720456 4721124 D YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 4720456..4721124 Yersinia pseudotuberculosis IP 32953 2955116 YP_072430.1 CDS YPTB3955 NC_006155.1 4721159 4721914 R similar to Yersinia pestis YPO4109 amino acid transport system permease (98.8% evalue=1.E-141); Pseudomonas aeruginosa PA2202 polar amino acid transport system permease (64.8% evalue=3.E-79); amino acid ABC transporter permease complement(4721159..4721914) Yersinia pseudotuberculosis IP 32953 2955117 YP_072431.1 CDS YPTB3956 NC_006155.1 4721916 4722653 R similar to Yersinia pestis YPO4110 ABC transporter permease (100% evalue=1.E-140); Pseudomonas aeruginosa PA2203 polar amino acid transport system permease (65.5% evalue=4.E-74); amino acid ABC transporter permease complement(4721916..4722653) Yersinia pseudotuberculosis IP 32953 2955118 YP_072432.1 CDS YPTB3957 NC_006155.1 4722836 4723690 R similar to Yersinia pestis YPO4111 periplasmic solute-binding protein (100% evalue=1.E-158); Pseudomonas aeruginosa PA2204 polar amino acid transport system substrate-binding protein (58.3% evalue=6.E-84); amino acid ABC transporter substrate-binding protein complement(4722836..4723690) Yersinia pseudotuberculosis IP 32953 2955119 YP_072433.1 CDS YPTB3958 NC_006155.1 4723910 4724581 R similar to Yersinia pestis YPO4112 membrane protein (100% evalue=1.E-121); Pseudomonas aeruginosa PA0664 hypothetical protein (37.9% evalue=2.E-10); hypothetical protein complement(4723910..4724581) Yersinia pseudotuberculosis IP 32953 2955120 YP_072434.1 CDS phoU NC_006155.1 4724877 4725599 R regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU complement(4724877..4725599) Yersinia pseudotuberculosis IP 32953 2956271 YP_072435.1 CDS pstB NC_006155.1 4725687 4726463 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(4725687..4726463) Yersinia pseudotuberculosis IP 32953 2956351 YP_072436.1 CDS pstA NC_006155.1 4726544 4727431 R Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA complement(4726544..4727431) Yersinia pseudotuberculosis IP 32953 2956349 YP_072437.1 CDS pstC NC_006155.1 4727433 4728404 R part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC complement(4727433..4728404) Yersinia pseudotuberculosis IP 32953 2956353 YP_072438.1 CDS pstS NC_006155.1 4728618 4729658 R similar to Yersinia pestis YPO4117 pstS, phoS; phosphate-binding periplasmic protein (100% evalue=0); Salmonella typhimurium STM3857 pstS; ABC superfamily (bind_prot), high-affinity phosphate transporter (86.9% evalue=1.E-175); phosphate ABC transporter substrate-binding protein complement(4728618..4729658) Yersinia pseudotuberculosis IP 32953 2956355 YP_072439.1 CDS glmS NC_006155.1 4730141 4731970 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(4730141..4731970) Yersinia pseudotuberculosis IP 32953 2955693 YP_072440.1 CDS glmU NC_006155.1 4732171 4733541 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(4732171..4733541) Yersinia pseudotuberculosis IP 32953 2955694 YP_072441.2 CDS atpC NC_006155.1 4734160 4734582 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon complement(4734160..4734582) Yersinia pseudotuberculosis IP 32953 2955259 YP_072442.1 CDS atpD NC_006155.1 4734604 4735986 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta complement(4734604..4735986) Yersinia pseudotuberculosis IP 32953 2955260 YP_072443.1 CDS atpG NC_006155.1 4736142 4737005 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma complement(4736142..4737005) Yersinia pseudotuberculosis IP 32953 2955263 YP_072444.1 CDS atpA NC_006155.1 4737067 4738608 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha complement(4737067..4738608) Yersinia pseudotuberculosis IP 32953 2955257 YP_072445.1 CDS atpH NC_006155.1 4738623 4739156 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta complement(4738623..4739156) Yersinia pseudotuberculosis IP 32953 2955264 YP_072446.1 CDS atpF NC_006155.1 4739171 4739641 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B complement(4739171..4739641) Yersinia pseudotuberculosis IP 32953 2955262 YP_072447.1 CDS atpE NC_006155.1 4739703 4739942 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C complement(4739703..4739942) Yersinia pseudotuberculosis IP 32953 2955261 YP_072448.1 CDS atpB NC_006155.1 4739992 4740816 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A complement(4739992..4740816) Yersinia pseudotuberculosis IP 32953 2955258 YP_072449.1 CDS atpI NC_006155.1 4740856 4741239 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I complement(4740856..4741239) Yersinia pseudotuberculosis IP 32953 2955265 YP_072450.1 CDS gidB NC_006155.1 4741906 4742526 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4741906..4742526) Yersinia pseudotuberculosis IP 32953 2955686 YP_072451.1 CDS gidA NC_006155.1 4742671 4744560 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(4742671..4744560) Yersinia pseudotuberculosis IP 32953 2955685 YPTB_RNA_1 tRNA tRNA-Glu1 NC_006155.1 13928 14003 D tRNA-Glu 13928..14003 Yersinia pseudotuberculosis IP 32953 2956760 YPTB_RNA_2 tRNA tRNA-Glu2 NC_006155.1 152485 152560 D tRNA-Glu 152485..152560 Yersinia pseudotuberculosis IP 32953 2956761 YPTB_RNA_3 tRNA tRNA-Asp-1 NC_006155.1 156071 156147 D tRNA-Asp 156071..156147 Yersinia pseudotuberculosis IP 32953 2956753 YPTB_RNA_4 tRNA tRNA-Trp-1 NC_006155.1 156156 156231 D tRNA-Trp 156156..156231 Yersinia pseudotuberculosis IP 32953 2956814 YPTB_RNA_5 tRNA tRNA-Arg1 NC_006155.1 216856 216932 D tRNA-Arg 216856..216932 Yersinia pseudotuberculosis IP 32953 2956744 YPTB_RNA_6 tRNA tRNA-His1 NC_006155.1 217016 217091 D tRNA-His 217016..217091 Yersinia pseudotuberculosis IP 32953 2956770 YPTB_RNA_7 tRNA tRNA-Leu1 NC_006155.1 217108 217194 D tRNA-Leu 217108..217194 Yersinia pseudotuberculosis IP 32953 2956774 YPTB_RNA_8 tRNA tRNA-Pro1 NC_006155.1 217270 217346 D tRNA-Pro 217270..217346 Yersinia pseudotuberculosis IP 32953 2956799 YPTB_RNA_9 tRNA tRNA-Ile1 NC_006155.1 322070 322146 D tRNA-Ile 322070..322146 Yersinia pseudotuberculosis IP 32953 2956771 YPTB_RNA_10 tRNA tRNA-Ala1 NC_006155.1 322198 322273 D tRNA-Ala 322198..322273 Yersinia pseudotuberculosis IP 32953 2956739 YPTB_RNA_11 tRNA tRNA-Thr1 NC_006155.1 330225 330300 D tRNA-Thr 330225..330300 Yersinia pseudotuberculosis IP 32953 2956810 YPTB_RNA_12 tRNA tRNA-Tyr1 NC_006155.1 330319 330403 D tRNA-Tyr 330319..330403 Yersinia pseudotuberculosis IP 32953 2956815 YPTB_RNA_13 tRNA tRNA-Gly1 NC_006155.1 330553 330627 D tRNA-Gly 330553..330627 Yersinia pseudotuberculosis IP 32953 2956764 YPTB_RNA_14 tRNA tRNA-Thr2 NC_006155.1 330634 330709 D tRNA-Thr 330634..330709 Yersinia pseudotuberculosis IP 32953 2956811 YPTB_RNA_15 tRNA tRNA-Glu3 NC_006155.1 362361 362436 D tRNA-Glu 362361..362436 Yersinia pseudotuberculosis IP 32953 2956762 YPTB_RNA_85 tRNA tRNA-Phe2 NC_006155.1 470331 470406 R tRNA-Phe complement(470331..470406) Yersinia pseudotuberculosis IP 32953 2956798 YPTB_RNA_16 tRNA tRNA-Gly2 NC_006155.1 500424 500499 D tRNA-Gly 500424..500499 Yersinia pseudotuberculosis IP 32953 2956765 YPTB_RNA_17 tRNA tRNA-Gly3 NC_006155.1 500591 500666 D tRNA-Gly 500591..500666 Yersinia pseudotuberculosis IP 32953 2956766 YPTB_RNA_18 tRNA tRNA-Gly4 NC_006155.1 500734 500809 D tRNA-Gly 500734..500809 Yersinia pseudotuberculosis IP 32953 2956767 YPTB_RNA_19 tRNA tRNA-Leu2 NC_006155.1 562886 562972 D tRNA-Leu 562886..562972 Yersinia pseudotuberculosis IP 32953 2956775 YPTB_RNA_20 tRNA tRNA-Met1 NC_006155.1 563033 563109 D tRNA-Met 563033..563109 Yersinia pseudotuberculosis IP 32953 2956790 YPTB_RNA_21 tRNA tRNA-Leu3 NC_006155.1 626995 627079 D tRNA-Leu 626995..627079 Yersinia pseudotuberculosis IP 32953 2956776 YPTB_RNA_84 tRNA tRNA-Leu8 NC_006155.1 674169 674255 R tRNA-Leu complement(674169..674255) Yersinia pseudotuberculosis IP 32953 2956781 YPTB_RNA_83 tRNA tRNA-Leu7 NC_006155.1 674351 674437 R tRNA-Leu complement(674351..674437) Yersinia pseudotuberculosis IP 32953 2956780 YPTB_RNA_82 tRNA tRNA-Leu6 NC_006155.1 674534 674620 R tRNA-Leu complement(674534..674620) Yersinia pseudotuberculosis IP 32953 2956779 YPTB_RNA_22 tRNA tRNA-Ser1 NC_006155.1 994068 994160 D tRNA-Ser 994068..994160 Yersinia pseudotuberculosis IP 32953 2956805 YPTB_RNA_23 tRNA tRNA-Arg2 NC_006155.1 994169 994245 D tRNA-Arg 994169..994245 Yersinia pseudotuberculosis IP 32953 2956745 YPTB_RNA_24 tRNA tRNA-Arg3 NC_006155.1 994303 994379 D tRNA-Arg 994303..994379 Yersinia pseudotuberculosis IP 32953 2956746 YPTB_RNA_25 tRNA tRNA-Arg4 NC_006155.1 994459 994535 D tRNA-Arg 994459..994535 Yersinia pseudotuberculosis IP 32953 2956747 YPTB_RNA_26 tRNA tRNA-Pseudo1 NC_006155.1 994615 994686 D tRNA-OTHER 994615..994686 Yersinia pseudotuberculosis IP 32953 2956802 YPTB_RNA_27 tRNA tRNA-Ile2 NC_006155.1 1020398 1020474 D tRNA-Ile 1020398..1020474 Yersinia pseudotuberculosis IP 32953 2956772 YPTB_RNA_28 tRNA tRNA-Ala2 NC_006155.1 1020526 1020601 D tRNA-Ala 1020526..1020601 Yersinia pseudotuberculosis IP 32953 2956740 YPTB_RNA_29 tRNA tRNA-Arg5 NC_006155.1 1245199 1245275 D tRNA-Arg 1245199..1245275 Yersinia pseudotuberculosis IP 32953 2956748 YPTB_RNA_81 tRNA tRNA-Gln3 NC_006155.1 1334962 1335036 R tRNA-Gln complement(1334962..1335036) Yersinia pseudotuberculosis IP 32953 2956759 YPTB_RNA_80 tRNA tRNA-Met7 NC_006155.1 1335042 1335118 R tRNA-Met complement(1335042..1335118) Yersinia pseudotuberculosis IP 32953 2956796 YPTB_RNA_79 tRNA tRNA-Gln2 NC_006155.1 1335151 1335225 R tRNA-Gln complement(1335151..1335225) Yersinia pseudotuberculosis IP 32953 2956758 YPTB_RNA_78 tRNA tRNA-Gln1 NC_006155.1 1335309 1335383 R tRNA-Gln complement(1335309..1335383) Yersinia pseudotuberculosis IP 32953 2956757 YPTB_RNA_77 tRNA tRNA-Leu5 NC_006155.1 1335413 1335497 R tRNA-Leu complement(1335413..1335497) Yersinia pseudotuberculosis IP 32953 2956778 YPTB_RNA_76 tRNA tRNA-Met6 NC_006155.1 1335505 1335581 R tRNA-Met complement(1335505..1335581) Yersinia pseudotuberculosis IP 32953 2956795 YPTB_RNA_30 tRNA tRNA-Lys1 NC_006155.1 1386989 1387064 D tRNA-Lys 1386989..1387064 Yersinia pseudotuberculosis IP 32953 2956782 YPTB_RNA_31 tRNA tRNA-Lys2 NC_006155.1 1387092 1387167 D tRNA-Lys 1387092..1387167 Yersinia pseudotuberculosis IP 32953 2956783 YPTB_RNA_32 tRNA tRNA-Lys3 NC_006155.1 1387195 1387270 D tRNA-Lys 1387195..1387270 Yersinia pseudotuberculosis IP 32953 2956784 YPTB_RNA_33 tRNA tRNA-Lys4 NC_006155.1 1387298 1387373 D tRNA-Lys 1387298..1387373 Yersinia pseudotuberculosis IP 32953 2956785 YPTB_RNA_34 tRNA tRNA-Lys5 NC_006155.1 1387402 1387471 D tRNA-Lys 1387402..1387471 Yersinia pseudotuberculosis IP 32953 2956786 YPTB_RNA_35 tRNA tRNA-Pseudo2 NC_006155.1 1387569 1387638 D tRNA-OTHER 1387569..1387638 Yersinia pseudotuberculosis IP 32953 2956803 YPTB_RNA_36 tRNA tRNA-Lys6 NC_006155.1 1387736 1387805 D tRNA-Lys 1387736..1387805 Yersinia pseudotuberculosis IP 32953 2956787 YPTB_RNA_37 tRNA tRNA-Ser2 NC_006155.1 1510666 1510753 D tRNA-Ser 1510666..1510753 Yersinia pseudotuberculosis IP 32953 2956806 YPTB_RNA_38 tRNA tRNA-Thr3 NC_006155.1 1510759 1510834 D tRNA-Thr 1510759..1510834 Yersinia pseudotuberculosis IP 32953 2956812 YPTB_RNA_75 tRNA tRNA-Pro3 NC_006155.1 1543259 1543335 R tRNA-Pro complement(1543259..1543335) Yersinia pseudotuberculosis IP 32953 2956801 YPTB_RNA_39 tRNA tRNA-Ser3 NC_006155.1 1759383 1759470 D tRNA-Ser 1759383..1759470 Yersinia pseudotuberculosis IP 32953 2956807 YPTB_RNA_74 tRNA tRNA-Asn3 NC_006155.1 1949762 1949837 R tRNA-Asn complement(1949762..1949837) Yersinia pseudotuberculosis IP 32953 2956752 YPTB_RNA_73 tRNA tRNA-Asn2 NC_006155.1 1960828 1960903 R tRNA-Asn complement(1960828..1960903) Yersinia pseudotuberculosis IP 32953 2956751 YPTB_RNA_40 tRNA tRNA-Lys7 NC_006155.1 2090133 2090208 D tRNA-Lys 2090133..2090208 Yersinia pseudotuberculosis IP 32953 2956788 YPTB_RNA_41 tRNA tRNA-Gly5 NC_006155.1 2096657 2096732 D tRNA-Gly 2096657..2096732 Yersinia pseudotuberculosis IP 32953 2956768 YPTB_RNA_42 tRNA tRNA-Cys1 NC_006155.1 2096785 2096858 D tRNA-Cys 2096785..2096858 Yersinia pseudotuberculosis IP 32953 2956756 YPTB_RNA_43 tRNA tRNA-Leu4 NC_006155.1 2096869 2096954 D tRNA-Leu 2096869..2096954 Yersinia pseudotuberculosis IP 32953 2956777 YPTB_RNA_72 tRNA tRNA-Asn1 NC_006155.1 2249472 2249547 R tRNA-Asn complement(2249472..2249547) Yersinia pseudotuberculosis IP 32953 2956750 YPTB_RNA_71 tRNA tRNA-Ser5 NC_006155.1 2368848 2368937 R tRNA-Ser complement(2368848..2368937) Yersinia pseudotuberculosis IP 32953 2956809 YPTB_RNA_70 tRNA tRNA-Ser4 NC_006155.1 2376517 2376606 R tRNA-Ser complement(2376517..2376606) Yersinia pseudotuberculosis IP 32953 2956808 YPTB_RNA_69 tRNA tRNA-Tyr3 NC_006155.1 2469384 2469468 R tRNA-Tyr complement(2469384..2469468) Yersinia pseudotuberculosis IP 32953 2956817 YPTB_RNA_68 tRNA tRNA-Tyr2 NC_006155.1 2469534 2469618 R tRNA-Tyr complement(2469534..2469618) Yersinia pseudotuberculosis IP 32953 2956816 YPTB_RNA_44 tRNA tRNA-Val1 NC_006155.1 2721115 2721191 D tRNA-Val 2721115..2721191 Yersinia pseudotuberculosis IP 32953 2956818 YPTB_RNA_45 tRNA tRNA-Val2 NC_006155.1 2721251 2721327 D tRNA-Val 2721251..2721327 Yersinia pseudotuberculosis IP 32953 2956819 YPTB_RNA_46 tRNA tRNA-Val3 NC_006155.1 2721497 2721573 D tRNA-Val 2721497..2721573 Yersinia pseudotuberculosis IP 32953 2956820 YPTB_RNA_67 tRNA tRNA-Arg6 NC_006155.1 3129140 3129214 R tRNA-Arg complement(3129140..3129214) Yersinia pseudotuberculosis IP 32953 2956749 YPTB_RNA_66 tRNA tRNA-Lys8 NC_006155.1 3198555 3198630 R tRNA-Lys complement(3198555..3198630) Yersinia pseudotuberculosis IP 32953 2956789 YPTB_RNA_65 tRNA tRNA-Val6 NC_006155.1 3198830 3198905 R tRNA-Val complement(3198830..3198905) Yersinia pseudotuberculosis IP 32953 2956823 YPTB_RNA_64 tRNA tRNA-Val5 NC_006155.1 3198950 3199025 R tRNA-Val complement(3198950..3199025) Yersinia pseudotuberculosis IP 32953 2956822 YPTB_RNA_63 tRNA tRNA-Val4 NC_006155.1 3199062 3199137 R tRNA-Val complement(3199062..3199137) Yersinia pseudotuberculosis IP 32953 2956821 YPTB_RNA_47 tRNA tRNA-Ala3 NC_006155.1 3201059 3201134 D tRNA-Ala 3201059..3201134 Yersinia pseudotuberculosis IP 32953 2956741 YPTB_RNA_48 tRNA tRNA-Ala4 NC_006155.1 3201212 3201287 D tRNA-Ala 3201212..3201287 Yersinia pseudotuberculosis IP 32953 2956742 YPTB_RNA_62 tRNA tRNA-Asp3 NC_006155.1 3497889 3497965 R tRNA-Asp complement(3497889..3497965) Yersinia pseudotuberculosis IP 32953 2956755 YPTB_RNA_61 tRNA tRNA-Asp2 NC_006155.1 3505348 3505424 R tRNA-Asp complement(3505348..3505424) Yersinia pseudotuberculosis IP 32953 2956754 YPTB_RNA_60 tRNA tRNA-Glu4 NC_006155.1 3508934 3509009 R tRNA-Glu complement(3508934..3509009) Yersinia pseudotuberculosis IP 32953 2956763 YPTB_RNA_49 tRNA tRNA-Met2 NC_006155.1 3562220 3562296 D tRNA-Met 3562220..3562296 Yersinia pseudotuberculosis IP 32953 2956791 YPTB_RNA_50 tRNA tRNA-Met3 NC_006155.1 3562464 3562540 D tRNA-Met 3562464..3562540 Yersinia pseudotuberculosis IP 32953 2956792 YPTB_RNA_51 tRNA tRNA-Met4 NC_006155.1 3562601 3562677 D tRNA-Met 3562601..3562677 Yersinia pseudotuberculosis IP 32953 2956793 YPTB_RNA_59 tRNA tRNA-Gly6 NC_006155.1 3719418 3719491 R tRNA-Gly complement(3719418..3719491) Yersinia pseudotuberculosis IP 32953 2956769 YPTB_RNA_52 tRNA tRNA-Phe1 NC_006155.1 3809995 3810070 D tRNA-Phe 3809995..3810070 Yersinia pseudotuberculosis IP 32953 2956797 YPTB_RNA_53 tRNA tRNA-Met5 NC_006155.1 4062048 4062124 D tRNA-Met 4062048..4062124 Yersinia pseudotuberculosis IP 32953 2956794 YPTB_RNA_58 tRNA tRNA-Thr4 NC_006155.1 4367606 4367681 R tRNA-Thr complement(4367606..4367681) Yersinia pseudotuberculosis IP 32953 2956813 YPTB_RNA_57 tRNA tRNA-Ala5 NC_006155.1 4371047 4371122 R tRNA-Ala complement(4371047..4371122) Yersinia pseudotuberculosis IP 32953 2956743 YPTB_RNA_56 tRNA tRNA-Ile3 NC_006155.1 4371174 4371250 R tRNA-Ile complement(4371174..4371250) Yersinia pseudotuberculosis IP 32953 2956773 YPTB_RNA_55 tRNA tRNA-Pro2 NC_006155.1 4593512 4593588 R tRNA-Pro complement(4593512..4593588) Yersinia pseudotuberculosis IP 32953 2956800 YPTB_RNA_54 tRNA tRNA-SeC(p)1 NC_006155.1 4637882 4637972 R tRNA-Sec complement(4637882..4637972) Yersinia pseudotuberculosis IP 32953 2956804 YPTB_RNA_93 rRNA YPTB_RNA_93 NC_006155.1 12249 13794 D 16S ribosomal RNA 12249..13794 Yersinia pseudotuberculosis IP 32953 2955142 YPTB_RNA_94 rRNA YPTB_RNA_94 NC_006155.1 14256 17162 D 23S ribosomal RNA 14256..17162 Yersinia pseudotuberculosis IP 32953 2955143 YPTB_RNA_95 rRNA YPTB_RNA_95 NC_006155.1 17271 17390 D 5S ribosomal RNA 17271..17390 Yersinia pseudotuberculosis IP 32953 2955144 YPTB_RNA_96 rRNA YPTB_RNA_96 NC_006155.1 150806 152351 D 16S ribosomal RNA 150806..152351 Yersinia pseudotuberculosis IP 32953 2955145 YPTB_RNA_97 rRNA YPTB_RNA_97 NC_006155.1 152813 155719 D 23S ribosomal RNA 152813..155719 Yersinia pseudotuberculosis IP 32953 2955146 YPTB_RNA_98 rRNA YPTB_RNA_98 NC_006155.1 155828 155947 D 5S ribosomal RNA 155828..155947 Yersinia pseudotuberculosis IP 32953 2955147 YPTB_RNA_99 rRNA YPTB_RNA_99 NC_006155.1 320424 321970 D 16S ribosomal RNA 320424..321970 Yersinia pseudotuberculosis IP 32953 2955148 YPTB_RNA_100 rRNA YPTB_RNA_100 NC_006155.1 322492 325399 D 23S ribosomal RNA 322492..325399 Yersinia pseudotuberculosis IP 32953 2955121 YPTB_RNA_101 rRNA YPTB_RNA_101 NC_006155.1 325508 325627 D 5S ribosomal RNA 325508..325627 Yersinia pseudotuberculosis IP 32953 2955122 YPTB_RNA_102 rRNA YPTB_RNA_102 NC_006155.1 360682 362227 D 16S ribosomal RNA 360682..362227 Yersinia pseudotuberculosis IP 32953 2955123 YPTB_RNA_103 rRNA YPTB_RNA_103 NC_006155.1 362689 365598 D 23S ribosomal RNA 362689..365598 Yersinia pseudotuberculosis IP 32953 2955124 YPTB_RNA_104 rRNA YPTB_RNA_104 NC_006155.1 365706 365825 D 5S ribosomal RNA 365706..365825 Yersinia pseudotuberculosis IP 32953 2955125 YPTB_RNA_105 rRNA YPTB_RNA_105 NC_006155.1 1018753 1020298 D 16S ribosomal RNA 1018753..1020298 Yersinia pseudotuberculosis IP 32953 2955126 YPTB_RNA_106 rRNA YPTB_RNA_106 NC_006155.1 1020820 1023726 D 23S ribosomal RNA 1020820..1023726 Yersinia pseudotuberculosis IP 32953 2955127 YPTB_RNA_107 rRNA YPTB_RNA_107 NC_006155.1 1023835 1023954 D 5S ribosomal RNA 1023835..1023954 Yersinia pseudotuberculosis IP 32953 2955128 YPTB_RNA_108 rRNA YPTB_RNA_108 NC_006155.1 3505548 3505667 R 5S ribosomal RNA complement(3505548..3505667) Yersinia pseudotuberculosis IP 32953 2955129 YPTB_RNA_109 rRNA YPTB_RNA_109 NC_006155.1 3505775 3508681 R 23S ribosomal RNA complement(3505775..3508681) Yersinia pseudotuberculosis IP 32953 2955130 YPTB_RNA_110 rRNA YPTB_RNA_110 NC_006155.1 3509143 3510688 R 16S ribosomal RNA complement(3509143..3510688) Yersinia pseudotuberculosis IP 32953 2955131 YPTB_r01 rRNA YPTB_r01 NC_006155.1 4367448 4367567 R 5S ribosomal RNA complement(4367448..4367567) Yersinia pseudotuberculosis IP 32953 5246996 YPTB_RNA_111 rRNA YPTB_RNA_111 NC_006155.1 4367695 4367814 R 5S ribosomal RNA complement(4367695..4367814) Yersinia pseudotuberculosis IP 32953 2955132 YPTB_RNA_112 rRNA YPTB_RNA_112 NC_006155.1 4367922 4370828 R 23S ribosomal RNA complement(4367922..4370828) Yersinia pseudotuberculosis IP 32953 2955133 YPTB_RNA_111.1 rRNA YPTB_RNA_111.1 NC_006155.1 4371350 4372891 R 16S ribosomal RNA complement(4371350..4372891) Yersinia pseudotuberculosis IP 32953 2959402